evm.model.Chr11.967

Transcript Overview
Nameevm.model.Chr11.967
Unique Nameevm.model.Chr11.967_hau_v1
TypemRNA
OrganismVigna unguiculata subsp. sesquipedalis ()
Sequence length558
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr11chromosomeChr11:33826514..33827544 +Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvuaL006Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuaL089Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuaL131Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuaL550Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ccvuaL0317Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuaL0356Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuaL0392Cajanus cajan Asha genome v1.0Cajanus cajan
pvvuaL127Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuaL139Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuaL417Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vrvvuaL184Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuaL449Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vuavuaR075Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuazwsR119Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuazwsR130Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuvuaL075Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuaL261Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuaL296Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
LR48_mrnaVigan08g103100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-KK1_014220Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_014638690.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat07G0375300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun11g099900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
evm.model.Chr05.2035.1.62113177Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
evm.TU.Chr11.967evm.TU.Chr11.967_hau_v1Vigna unguiculata subsp. sesquipedalisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
evm.model.Chr11.967.exon1evm.model.Chr11.967.exon1_hau_v1Vigna unguiculata subsp. sesquipedalisexon
evm.model.Chr11.967.exon2evm.model.Chr11.967.exon2_hau_v1Vigna unguiculata subsp. sesquipedalisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.evm.model.Chr11.967cds.evm.model.Chr11.967_hau_v1Vigna unguiculata subsp. sesquipedalisCDS
cds.evm.model.Chr11.967cds.evm.model.Chr11.967_hau_v1_2Vigna unguiculata subsp. sesquipedalisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
evm.model.Chr11.967_hau_v1evm.model.Chr11.967_hau_v1Vigna unguiculata subsp. sesquipedalispolypeptide
evm.model.Chr11.967_hau_v1evm.model.Chr11.967_hau_v1-proteinVigna unguiculata subsp. sesquipedalispolypeptide


Homology
[Close]
BLAST of evm.model.Chr11.967 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SBB9|A0A0S3SBB9_PHAAN (HTH myb-type domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G126100 PE=4 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 5.841e-73
Identity = 127/153 (83.01%), Postives = 132/153 (86.27%), Query Frame = 0 
Query:    1 MLAVAPLRSIKDEKNKGEMEGFSKAAKTASDDVDFDELSEGNLLESINFDDLFVGIDVGGDILPDLEMFGEFSVSAGEESSEMNS----SKEENDQNCVFTVTKKE-EEDKSCCAASGHEDSGSNRSKNGEPVVVNPAPKEGGKGRKSSSGGL 148
            MLAVAPLRSIKDEKN+ EMEGFS AAK+ASDD DF ELSEGNLLESINFDDLFVGIDVGGD+LPDLEMFGEFSVSAGEESSEMNS    SKEEND+NCV TV+KKE EEDKS CAASG E      SKNGE VVVNPAPKEGGKGRKSSS  L
Sbjct:    1 MLAVAPLRSIKDEKNQREMEGFSMAAKSASDDDDFRELSEGNLLESINFDDLFVGIDVGGDVLPDLEMFGEFSVSAGEESSEMNSSAENSKEENDRNCVLTVSKKEVEEDKSSCAASGQEIV----SKNGESVVVNPAPKEGGKGRKSSSAQL 149
[Close]
BLAST of evm.model.Chr11.967 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9V687|A0A0L9V687_PHAAN (HTH myb-type domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g103100 PE=4 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 5.841e-73
Identity = 127/153 (83.01%), Postives = 132/153 (86.27%), Query Frame = 0 
Query:    1 MLAVAPLRSIKDEKNKGEMEGFSKAAKTASDDVDFDELSEGNLLESINFDDLFVGIDVGGDILPDLEMFGEFSVSAGEESSEMNS----SKEENDQNCVFTVTKKE-EEDKSCCAASGHEDSGSNRSKNGEPVVVNPAPKEGGKGRKSSSGGL 148
            MLAVAPLRSIKDEKN+ EMEGFS AAK+ASDD DF ELSEGNLLESINFDDLFVGIDVGGD+LPDLEMFGEFSVSAGEESSEMNS    SKEEND+NCV TV+KKE EEDKS CAASG E      SKNGE VVVNPAPKEGGKGRKSSS  L
Sbjct:    1 MLAVAPLRSIKDEKNQREMEGFSMAAKSASDDDDFRELSEGNLLESINFDDLFVGIDVGGDVLPDLEMFGEFSVSAGEESSEMNSSAENSKEENDRNCVLTVSKKEVEEDKSSCAASGQEIV----SKNGESVVVNPAPKEGGKGRKSSSAQL 149
[Close]
BLAST of evm.model.Chr11.967 vs. UniProtKB/TrEMBL
Match: tr|V7AKX5|V7AKX5_PHAVU (HTH myb-type domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G124200g PE=4 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.804e-70
Identity = 122/158 (77.22%), Postives = 130/158 (82.28%), Query Frame = 0 
Query:    1 MLAVAPLRSIKDEKNKGEMEGFSKAAKTASDDVDFDELSEGNLLESINFDDLFVGIDVGGDILPDLEMFGEFSVSAGEESSEMNS----SKEENDQNCVFTVTKKEEEDKSCCAASGHEDSGSNR------SKNGEPVVVNPAPKEGGKGRKSSSGGL 148
            MLAVAPLRSIKDEKN+GEMEGFS A  T  DD DF +LSEGNLLESINFDDLFVGIDV GD+LPDLEMFGEFSVSAGEESSEMNS    SKEEND+NCV T +K EEEDKS CAAS  +DSGSN       +KNGE VVVNPAPKEGGKG+KSSS  L
Sbjct:    1 MLAVAPLRSIKDEKNQGEMEGFSMATATTPDDFDFVDLSEGNLLESINFDDLFVGIDVDGDVLPDLEMFGEFSVSAGEESSEMNSSADNSKEENDKNCVITASKTEEEDKSSCAASP-QDSGSNPGEEIVSNKNGESVVVNPAPKEGGKGKKSSSAQL 157
[Close]
BLAST of evm.model.Chr11.967 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TK93|A0A1S3TK93_VIGRR (transcription activator GLK1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106756311 PE=4 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 5.562e-69
Identity = 127/158 (80.38%), Postives = 132/158 (83.54%), Query Frame = 0 
Query:    1 MLAVAPLRSIKDEKNKGEMEGFSKAAKTASDDVDFDELSEGNLLESINFDDLFVGIDVGGDILPDLEMFGEFSVSAGEESSEMNS----SKEENDQNCVFTVTKKE-EEDKSCCAASGHEDSGSNR-----SKNGEPVVVNPAPKEGGKGRKSSSGGL 148
            MLAVAPLRSIKDEKN+ EME    AAKT SDD DF ELSEGNLLESINFDDLFVGIDVGGD+LPDLEMFGEFSVSAGEESSEMNS    SKEEND+NCV TV+KKE EEDKS CAASG +DS SNR     SKNGE VVVNPAPKE GKGRKSSS  L
Sbjct:    1 MLAVAPLRSIKDEKNQREME----AAKTTSDDDDFGELSEGNLLESINFDDLFVGIDVGGDVLPDLEMFGEFSVSAGEESSEMNSSGENSKEENDRNCVLTVSKKEVEEDKSSCAASG-QDSVSNRGEEIVSKNGESVVVNPAPKESGKGRKSSSAQL 153
[Close]
BLAST of evm.model.Chr11.967 vs. UniProtKB/TrEMBL
Match: tr|I1KEY5|I1KEY5_SOYBN (HTH myb-type domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_06G289300 PE=4 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 6.835e-53
Identity = 107/155 (69.03%), Postives = 120/155 (77.42%), Query Frame = 0 
Query:    1 MLAVAPLRS-IKDEKNKGEMEGFSKAAKTASDDVDFDELSEGNLLESINFDDLFVGIDVGGDILPDLEMFGEFS--VSAGEESSEMN----SSKEENDQNCVFTVTKK-EEEDKSCCAASGHEDSGSNR-----SKNGEPVVVNPAPKEGGKGRK 142
            MLAV+PLRS IKDEK +GEMEG    A T +DDV F +LSEGNLLESINFD+LFVGID+ GD+LPDLEMFGEFS  VS GEESSEMN    SSK ENDQN + T +KK EEEDK+ C ASG +D GSNR     S+  E VVVNPAPK+GGKGRK
Sbjct:    1 MLAVSPLRSNIKDEKKQGEMEGNFSMATTTTDDVVFGDLSEGNLLESINFDELFVGIDIHGDVLPDLEMFGEFSVDVSTGEESSEMNSSAKSSKLENDQNVIATTSKKEEEEDKTSCNASG-QDLGSNRGEEIVSERDESVVVNPAPKDGGKGRK 154
[Close]
BLAST of evm.model.Chr11.967 vs. UniProtKB/TrEMBL
Match: tr|I1LS71|I1LS71_SOYBN (HTH myb-type domain-containing protein OS=Glycine max OX=3847 GN=100777595 PE=4 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 7.788e-53
Identity = 106/156 (67.95%), Postives = 119/156 (76.28%), Query Frame = 0 
Query:    1 MLAVAPLRSIKDEKNKGEMEG-FSKAAKTASDDVDFDELSEGNLLESINFDDLFVGIDVGGDILPDLEMFGEFS--VSAGEESSEMNS----SKEENDQNCVFTV--TKKEEEDKSCCAASGHEDSGSNR-----SKNGEPVVVNPAPKEGGKGRK 142
            MLAV+PLRSIKDEKN+GEMEG FS A  T + DVDF +LSEGNLLESINFDDLFVGID+ GD+LPDLEMF EFS  V+ GEESSEMNS    SK ENDQN +      K+EEEDK+ C +SG +D GS R     SK  E VVVNPAPK+GGKGRK
Sbjct:    1 MLAVSPLRSIKDEKNQGEMEGNFSMATTTTTGDVDFGDLSEGNLLESINFDDLFVGIDINGDVLPDLEMFHEFSVDVNTGEESSEMNSSADNSKVENDQNVMINTGPKKEEEEDKASCNSSG-QDLGSIRGEEIVSKRDESVVVNPAPKDGGKGRK 155
[Close]
BLAST of evm.model.Chr11.967 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2PMF1|A0A0B2PMF1_GLYSO (Transcription activator GLK1 OS=Glycine soja OX=3848 GN=D0Y65_034056 PE=4 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 9.241e-53
Identity = 106/156 (67.95%), Postives = 119/156 (76.28%), Query Frame = 0 
Query:    1 MLAVAPLRSIKDEKNKGEMEG-FSKAAKTASDDVDFDELSEGNLLESINFDDLFVGIDVGGDILPDLEMFGEFS--VSAGEESSEMNS----SKEENDQNCVFTV--TKKEEEDKSCCAASGHEDSGSNR-----SKNGEPVVVNPAPKEGGKGRK 142
            MLAV+PLRSIKDEKN+GEMEG FS A  T + DVDF +LSEGNLLESINFDDLFVGID+ GD+LPDLEMF EFS  V+ GEESSEMNS    SK ENDQN +      K+EEEDK+ C +SG +D GS R     SK  E VVVNPAPK+GGKGRK
Sbjct:    1 MLAVSPLRSIKDEKNQGEMEGNFSMATTTTTGDVDFGDLSEGNLLESINFDDLFVGIDINGDVLPDLEMFHEFSVDVNTGEESSEMNSSADNSKVENDQNVMINTGPKKEEEEDKASCNSSG-QDLGSIRGEEIVSKRDESVVVNPAPKDGGKGRK 155
[Close]
BLAST of evm.model.Chr11.967 vs. UniProtKB/TrEMBL
Match: tr|C6TD50|C6TD50_SOYBN (HTH myb-type domain-containing protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.216e-52
Identity = 107/155 (69.03%), Postives = 119/155 (76.77%), Query Frame = 0 
Query:    1 MLAVAPLRS-IKDEKNKGEMEGFSKAAKTASDDVDFDELSEGNLLESINFDDLFVGIDVGGDILPDLEMFGEFS--VSAGEESSEMN----SSKEENDQNCVFTVTKK-EEEDKSCCAASGHEDSGSNR-----SKNGEPVVVNPAPKEGGKGRK 142
            MLAV+PLRS IKDEK +GEMEG    A T +DDV F +LSEGNLLESINFD+LFVGID  GD+LPDLEMFGEFS  VS GEESSEMN    SSK ENDQN + T +KK EEEDK+ C ASG +D GSNR     S+  E VVVNPAPK+GGKGRK
Sbjct:    1 MLAVSPLRSNIKDEKKQGEMEGNFSMATTTTDDVVFGDLSEGNLLESINFDELFVGIDTHGDVLPDLEMFGEFSVDVSTGEESSEMNSSAKSSKLENDQNVIATTSKKEEEEDKTSCNASG-QDLGSNRGEEIVSERDESVVVNPAPKDGGKGRK 154
[Close]
BLAST of evm.model.Chr11.967 vs. UniProtKB/TrEMBL
Match: tr|A0A151SVJ9|A0A151SVJ9_CAJCA (Two-component response regulator-like APRR2 OS=Cajanus cajan OX=3821 GN=KK1_014220 PE=4 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 5.367e-51
Identity = 104/152 (68.42%), Postives = 115/152 (75.66%), Query Frame = 0 
Query:    1 MLAVAPLRSIKDEKNKGEMEGFSKAAKTASDDVDFDELSEGNLLESINFDDLFVGIDVGGDILPDLEMFGEFSVSAGEESSEMNS----SKEENDQNCVFTVTKKEEEDKSCCAASGHEDSGSNR-----SKNGEPVVVNPA-PKEGGKGRK 142
            MLAV+PLRS KDEKN+G MEGFS A  T +DDVDF +LSEGNLLESINFDDLFV IDV GD+LPDLEMFGEFSVSAGE+SSEMNS    SK END++ V T +KKEEEDKS           SNR     SK  E VVV+PA PK+GGKGRK
Sbjct:    1 MLAVSPLRSTKDEKNQGAMEGFSMAT-TTTDDVDFGDLSEGNLLESINFDDLFVDIDVDGDVLPDLEMFGEFSVSAGEDSSEMNSSGENSKVENDESNVITASKKEEEDKSS----------SNRGEEIVSKRDESVVVDPAPPKDGGKGRK 141
[Close]
BLAST of evm.model.Chr11.967 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2P0Q2|A0A0B2P0Q2_GLYSO (Transcription activator GLK1 OS=Glycine soja OX=3848 GN=D0Y65_016106 PE=4 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.062e-49
Identity = 109/156 (69.87%), Postives = 122/156 (78.21%), Query Frame = 0 
Query:    1 MLAVAPLRS-IKDEKNKGEMEG-FSKAAKTASDDVDFDELSEGNLLESINFDDLFVGIDVGGDILPDLEMFGEFS--VSAGEESSEMN----SSKEENDQNCVFTVTKK-EEEDKSCCAASGHEDSGSNR-----SKNGEPVVVNPAPKEGGKGRK 142
            MLAV+PLRS IKDEK +GEMEG FS A  T +DDV F +LSEGNLLESINFD+LFVGID+ GD+LPDLEMFGEFS  VS GEESSEMN    SSK ENDQN + T +KK EEEDK+ C ASG +D GSNR     S+  E VVVNPAPK+GGKGRK
Sbjct:    1 MLAVSPLRSNIKDEKKQGEMEGNFSMATTTTTDDVVFGDLSEGNLLESINFDELFVGIDIHGDVLPDLEMFGEFSVDVSTGEESSEMNSSAKSSKLENDQNVIATTSKKEEEEDKTSCNASG-QDLGSNRGEEIVSERDESVVVNPAPKDGGKGRK 155
The following BLAST results are available for this feature:
BLAST of evm.model.Chr11.967 vs.
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of evm.model.Chr11.967 vs.
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs arabidopsis Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of evm.model.Chr11.967 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3SBB9|A0A0S3SBB9_PHAAN5.841e-7383.01HTH myb-type domain-containing protein OS=Vigna an... [more]
tr|A0A0L9V687|A0A0L9V687_PHAAN5.841e-7383.01HTH myb-type domain-containing protein OS=Phaseolu... [more]
tr|V7AKX5|V7AKX5_PHAVU1.804e-7077.22HTH myb-type domain-containing protein OS=Phaseolu... [more]
tr|A0A1S3TK93|A0A1S3TK93_VIGRR5.562e-6980.38transcription activator GLK1 OS=Vigna radiata var.... [more]
tr|I1KEY5|I1KEY5_SOYBN6.835e-5369.03HTH myb-type domain-containing protein OS=Glycine ... [more]
tr|I1LS71|I1LS71_SOYBN7.788e-5367.95HTH myb-type domain-containing protein OS=Glycine ... [more]
tr|A0A0B2PMF1|A0A0B2PMF1_GLYSO9.241e-5367.95Transcription activator GLK1 OS=Glycine soja OX=38... [more]
tr|C6TD50|C6TD50_SOYBN2.216e-5269.03HTH myb-type domain-containing protein OS=Glycine ... [more]
tr|A0A151SVJ9|A0A151SVJ9_CAJCA5.367e-5168.42Two-component response regulator-like APRR2 OS=Caj... [more]
tr|A0A0B2P0Q2|A0A0B2P0Q2_GLYSO1.062e-4969.87Transcription activator GLK1 OS=Glycine soja OX=38... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0
Date Performed: 2023-06-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..111
IPR044825Transcription activator GLK1/2-likePANTHERPTHR31312TRANSCRIPTION ACTIVATOR GLK1coord: 1..124

Sequences
The following sequences are available for this feature:

mRNA sequence

>evm.model.Chr11.967_hau_v1 ID=evm.model.Chr11.967_hau_v1; Name=evm.model.Chr11.967; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=558bp
ATGCTTGCCGTGGCACCTTTGAGGAGCATCAAAGATGAAAAGAACAAAGG
AGAGATGGAGGGTTTCTCGAAGGCAGCAAAAACAGCATCAGATGATGTTG
ACTTCGATGAACTTTCTGAAGGGAACTTGTTGGAGAGCATCAACTTCGAC
GATCTCTTCGTCGGCATCGACGTCGGCGGAGATATCTTGCCGGACTTGGA
GATGTTTGGTGAGTTTTCCGTCAGCGCCGGGGAAGAGTCGTCGGAGATGA
ACTCATCGAAGGAGGAGAACGACCAGAATTGTGTTTTCACTGTTACAAAA
AAGGAAGAAGAAGACAAAAGTTGTTGTGCTGCTTCAGGTCATGAAGACTC
GGGGTCAAACCGGAGCAAGAATGGTGAACCGGTGGTGGTGAATCCTGCGC
CAAAAGAAGGTGGAAAAGGAAGAAAATCTTCATCGGGTGGATTGGACCCC
AGAATTGCACAGGCGATTTGTGCAAGCTGTGGAACAGTTAGGAGTGGACA
AAGCAGTGCCTTCAAGAATTTTGGAGATTATGGGAATCGATTGTTTAACT
CGTCATAA
back to top

protein sequence of evm.model.Chr11.967_hau_v1

>evm.model.Chr11.967_hau_v1 ID=evm.model.Chr11.967_hau_v1; Name=evm.model.Chr11.967_hau_v1; organism=Vigna unguiculata subsp. sesquipedalis; type=polypeptide; length=185bp
MLAVAPLRSIKDEKNKGEMEGFSKAAKTASDDVDFDELSEGNLLESINFD
DLFVGIDVGGDILPDLEMFGEFSVSAGEESSEMNSSKEENDQNCVFTVTK
KEEEDKSCCAASGHEDSGSNRSKNGEPVVVNPAPKEGGKGRKSSSGGLDP
RIAQAICASCGTVRSGQSSAFKNFGDYGNRLFNSS
back to top

mRNA from alignment at Chr11:33826514..33827544+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>evm.model.Chr11.967_hau_v1 ID=evm.model.Chr11.967_hau_v1; Name=evm.model.Chr11.967; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=1031bp; location=Sequence derived from: Chr11:33826514..33827544+ (Vigna unguiculata subsp. sesquipedalis
ATGCTTGCCGTGGCACCTTTGAGGAGCATCAAAGATGAAAAGAACAAAGG
AGAGATGGAGGGTTTCTCGAAGGCAGCAAAAACAGCATCAGATGATGTTG
ACTTCGATGAACTTTCTGAAGGGAACTTGTTGGAGAGCATCAACTTCGAC
GATCTCTTCGTCGGCATCGACGTCGGCGGAGATATCTTGCCGGACTTGGA
GATGTTTGGTGAGTTTTCCGTCAGCGCCGGGGAAGAGTCGTCGGAGATGA
ACTCATCGAAGGAGGAGAACGACCAGAATTGTGTTTTCACTGTTACAAAA
AAGGAAGAAGAAGACAAAAGTTGTTGTGCTGCTTCAGGTCATGAAGACTC
GGGGTCAAACCGGAGCAAGAATGGTGAACCGGTGGTGGTGAATCCTGCGC
CAAAAGAAGGTGGAAAAGGAAGAAAATCTTCATCGGGTCAGTTGAAGAAT
AATAGTAATAGTAATAATCCTCACGGGAAGAGAAAAGTGAAGGTAGCTAG
ATAGTTTGTTGTACTTTGAACTTATCTGCTAATTTATTTTTCTTTCTCTC
CCACGATTGGTTTCAGTGAAGGTAGCTAGTGTCATGAGACACGAGTCATG
TGCAACTGAGCTAACACTTAAGGTTCTGTCACTGTCTCAATTATGACTCA
TGACAAGGTCCCTTTGTATCACAAACTCACGGGTACCGTAAGGGTGTAAA
GAGAGAGAGAAATTCCGAGTATCAGTGCCTAGCATTAGAAAAGATAGAAA
CTTAGATTCTTTATCAAACAGATTGTAACCAAGAAAAACCCAATTCAAAG
TAAAAATATGAAGAGAAAACAGCGTCTAATAGTTCTTTTATGTTAGAAGT
TTTTGAGCTTTGAAGTAGTGTGTGTATTTATGCTTTCCTTTTTTCTGGGT
TATGTGTAGGTGGATTGGACCCCAGAATTGCACAGGCGATTTGTGCAAGC
TGTGGAACAGTTAGGAGTGGACAAAGCAGTGCCTTCAAGAATTTTGGAGA
TTATGGGAATCGATTGTTTAACTCGTCATAA
back to top

Coding sequence (CDS) from alignment at Chr11:33826514..33827544+

>evm.model.Chr11.967_hau_v1 ID=evm.model.Chr11.967_hau_v1; Name=evm.model.Chr11.967; organism=Vigna unguiculata subsp. sesquipedalis; type=CDS; length=558bp; location=Sequence derived from: Chr11:33826514..33827544+ (Vigna unguiculata subsp. sesquipedalis
ATGCTTGCCGTGGCACCTTTGAGGAGCATCAAAGATGAAAAGAACAAAGG
AGAGATGGAGGGTTTCTCGAAGGCAGCAAAAACAGCATCAGATGATGTTG
ACTTCGATGAACTTTCTGAAGGGAACTTGTTGGAGAGCATCAACTTCGAC
GATCTCTTCGTCGGCATCGACGTCGGCGGAGATATCTTGCCGGACTTGGA
GATGTTTGGTGAGTTTTCCGTCAGCGCCGGGGAAGAGTCGTCGGAGATGA
ACTCATCGAAGGAGGAGAACGACCAGAATTGTGTTTTCACTGTTACAAAA
AAGGAAGAAGAAGACAAAAGTTGTTGTGCTGCTTCAGGTCATGAAGACTC
GGGGTCAAACCGGAGCAAGAATGGTGAACCGGTGGTGGTGAATCCTGCGC
CAAAAGAAGGTGGAAAAGGAAGAAAATCTTCATCGGGTGGATTGGACCCC
AGAATTGCACAGGCGATTTGTGCAAGCTGTGGAACAGTTAGGAGTGGACA
AAGCAGTGCCTTCAAGAATTTTGGAGATTATGGGAATCGATTGTTTAACT
CGTCATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR044825GLK1/2-like
Vocabulary: Biological Process
TermDefinition
GO:0045893positive regulation of DNA-templated transcription
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity