jg28446.t1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of jg28446.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YGH0|A0A1S2YGH0_CICAR (uncharacterized protein LOC101490830 OS=Cicer arietinum OX=3827 GN=LOC101490830 PE=4 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.831e-31 Identity = 63/97 (64.95%), Postives = 71/97 (73.20%), Query Frame = 0 Query: 54 TLHSTHDVTLSTTTNPLGITR-VENQSIKREIPTSSTNTEIVIVREEILEGEASSLYFLHPCYYFKLARVAFLKCFGLDSVCEFDNPSTQKHRGEKK 149 +L S H T++ TNPL ITR VEN SI+ EI TS +VRE I EGEA+SLYFLHPCYYFKLARVAFLKCFG DS E DNPSTQ + G+KK Sbjct: 56 SLSSIHSTTVTLNTNPLHITRGVENLSIEGEIRTSRE-----VVREGIAEGEATSLYFLHPCYYFKLARVAFLKCFGFDSTSESDNPSTQNYMGKKK 147
BLAST of jg28446.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A396GS55|A0A396GS55_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr8g0382981 PE=4 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.173e-31 Identity = 77/107 (71.96%), Postives = 83/107 (77.57%), Query Frame = 0 Query: 44 SDHTIVDSPYTLHSTHDVTLSTTTNPLGITR-VENQSIKREIPTSSTNTEIVIVREEILEGEASSLYFLHPCYYFKLARVAFLKCFGLDSVCEFDNPSTQKHRGEKK 149 SDHT DS TLHST VTL+T NPL ITR VEN SIK EIPT T+ EIV E I EGEASSLYFLHPCYYFKLARVAFLKCFGL+S DNP+TQK+RG+KK Sbjct: 41 SDHTTADSSSTLHSTSSVTLNT--NPLQITRAVENISIKGEIPTR-TSREIVREVEGIAEGEASSLYFLHPCYYFKLARVAFLKCFGLES----DNPATQKNRGKKK 140
BLAST of jg28446.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A371G8U2|A0A371G8U2_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_31647 PE=4 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 7.230e-21 Identity = 54/87 (62.07%), Postives = 58/87 (66.67%), Query Frame = 0 Query: 67 TNPLGITR-VENQSIKREIPTSSTNTEIVIVREEILEGEA---SSLYFLHPCYYFKLARVAFLKCFGLDSVCEFDNPSTQKHRGEKK 149 TN L TR EN SIK EI +S + IVREEI EG A SSLYFLHPCYYF LA+ AFLKC GLDS E D PSTQ HR K+ Sbjct: 74 TNRLHNTRGAENLSIKGEIASSGSTG---IVREEIAEGVAPPTSSLYFLHPCYYFNLAKEAFLKCLGLDSTSESDAPSTQIHRKRKE 157
BLAST of jg28446.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A445KQV8|A0A445KQV8_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_012672 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 8.029e-20 Identity = 53/87 (60.92%), Postives = 57/87 (65.52%), Query Frame = 0 Query: 67 TNPLGITR-VENQSIKREIPTSSTNTEIVIVREEILEGEASS--LYFLHPCYYFKLARVAFLKCFGLDSV-CEFDNPSTQKHRGEKK 149 TN L TR VEN SIK EI IVREE EGEASS +YFLHPCYYF LA+ AFLKC GLDS + D PSTQKHR + K Sbjct: 74 TNRLQSTRGVENTSIK---------GEIGIVREEFAEGEASSSSVYFLHPCYYFNLAKEAFLKCLGLDSTSSKSDAPSTQKHRKQNK 151
BLAST of jg28446.t1 vs. UniProtKB/TrEMBL
Match: tr|I1K4P6|I1K4P6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100805616 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.040e-20 Identity = 53/87 (60.92%), Postives = 57/87 (65.52%), Query Frame = 0 Query: 67 TNPLGITR-VENQSIKREIPTSSTNTEIVIVREEILEGEASS--LYFLHPCYYFKLARVAFLKCFGLDSV-CEFDNPSTQKHRGEKK 149 TN L TR VEN SIK EI IVREE EGEASS +YFLHPCYYF LA+ AFLKC GLDS + D PSTQKHR + K Sbjct: 74 TNRLQSTRGVENTSIKGEIG---------IVREEFAEGEASSSSVYFLHPCYYFNLAKEAFLKCLGLDSTSSKSDAPSTQKHRKQNK 151
BLAST of jg28446.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A151TKJ2|A0A151TKJ2_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_023918 PE=4 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.055e-19 Identity = 57/82 (69.51%), Postives = 58/82 (70.73%), Query Frame = 0 Query: 64 STTTNPLGITR-VENQSIKREIPTSSTNTEIVIVREEIL--EGEAS--SLYFLHPCYYFKLARVAFLKCFGLDSVCEFDNPS 140 ST TNPL TR VEN SIK EI S+ NT IV REEI EGEAS SLYFLHPCYYF LAR AFLKC GLDS E D PS Sbjct: 66 STVTNPLHNTRGVENLSIKGEI-VSTGNTGIV--REEIAVAEGEASTSSLYFLHPCYYFNLAREAFLKCLGLDSASESDAPS 144
BLAST of jg28446.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4Q9U2|A0A6A4Q9U2_LUPAL (Putative elicitor peptide OS=Lupinus albus OX=3870 GN=Lalb_Chr07g0184821 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.507e-19 Identity = 53/85 (62.35%), Postives = 56/85 (65.88%), Query Frame = 0 Query: 67 TNPLGITRV-ENQSIKREIPTSSTNTEIVIVREEILEGEASSL-YFLHPCYYFKLARVAFLKCFGLDSVCEFDNPSTQKHRGEKK 149 TN L +R EN SIK EI T ST IVREEI E E SSL YFLHPCYYF+LAR FLKC GLDS E D STQ HR K+ Sbjct: 83 TNRLQNSRGGENLSIKGEIATCST---TRIVREEIAEREGSSLLYFLHPCYYFRLARFTFLKCLGLDSTSESDCSSTQNHRKRKE 164
BLAST of jg28446.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A445DS59|A0A445DS59_ARAHY (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A03g011945 PE=4 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.534e-19 Identity = 54/95 (56.84%), Postives = 61/95 (64.21%), Query Frame = 0 Query: 56 HSTHDVTLSTTTNPLGITR-VENQSIKREIPTSSTNTEIVIVREEILEGEASSLYFLHPCYYFKLARVAFLKCFGLDSVCEFDNPSTQKHRGEKK 149 H H T + TN L TR EN SIK EI TSS+ VREEI E E S LYFLHPC+YFKLARVAFLKC GLDS E D+P ++ R K+ Sbjct: 67 HHHHVSTSTALTNRLQHTRGAENLSIKGEIETSSSTR---TVREEIAEREGSPLYFLHPCHYFKLARVAFLKCLGLDST-ESDSPPIRRPRKRKE 157
BLAST of jg28446.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P4CSJ5|A0A6P4CSJ5_ARADU (uncharacterized protein LOC107480421 OS=Arachis duranensis OX=130453 GN=LOC107480421 PE=4 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.797e-19 Identity = 54/95 (56.84%), Postives = 61/95 (64.21%), Query Frame = 0 Query: 56 HSTHDVTLSTTTNPLGITR-VENQSIKREIPTSSTNTEIVIVREEILEGEASSLYFLHPCYYFKLARVAFLKCFGLDSVCEFDNPSTQKHRGEKK 149 H H T + TN L TR EN SIK EI TSS+ VREEI E E S LYFLHPC+YFKLARVAFLKC GLDS E D+P ++ R K+ Sbjct: 71 HHHHVSTSTALTNRLQHTRGAENLSIKGEIETSSSTR---TVREEIAEREGSPLYFLHPCHYFKLARVAFLKCLGLDST-ESDSPPIRRPRKRKE 161
BLAST of jg28446.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A444ZXH2|A0A444ZXH2_ARAHY (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g063491 PE=4 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.989e-19 Identity = 55/93 (59.14%), Postives = 62/93 (66.67%), Query Frame = 0 Query: 59 HDVTLSTT-TNPLGITR-VENQSIKREIPTSSTNTEIVIVREEILEGEASSLYFLHPCYYFKLARVAFLKCFGLDSVCEFDNPSTQKHRGEKK 149 H V+ ST TN L TR EN SIK EI TSS+ VREEI E E S LYFLHPC+YFKLARVAFLKC GLDS E D+P ++ R K+ Sbjct: 73 HHVSTSTALTNRLQHTRGAENLSIKGEIETSSSTR---TVREEIAEREGSPLYFLHPCHYFKLARVAFLKCLGLDST-ESDSPPIRRPRKRKE 161 The following BLAST results are available for this feature:
BLAST of jg28446.t1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-15 (Blastp of Vicia sativa cv. Studenica proteins vs UniProt TrEMBL) Total hits: 10
BLAST of jg28446.t1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-15 (Blastp of Vicia sativa cv. Studenica proteins vs UniProt Swissprot) Total hits: 0
BLAST of jg28446.t1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-15 (Blastp of Vicia sativa cv. Studenica proteins vs arabidopsis Araport11) Total hits: 0
InterPro
Analysis Name: InterProScan Analysis for Vicia sativa cv. Studenica genome v1.0
Date Performed: 2023-06-15
Sequences
The
following sequences are available for this feature:
mRNA sequence >jg28446.t1_Vsativa-uoa_v1 ID=jg28446.t1_Vsativa-uoa_v1; Name=jg28446.t1; organism=Vicia sativa; type=mRNA; length=450bpback to top protein sequence of jg28446.t1_Vsativa-uoa_v1 >jg28446.t1_Vsativa-uoa_v1 ID=jg28446.t1_Vsativa-uoa_v1; Name=jg28446.t1_Vsativa-uoa_v1; organism=Vicia sativa; type=polypeptide; length=149bpback to top mRNA from alignment at Chr4:34580905..34581742+ Legend: exonCDSstart_codonpolypeptideintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.>jg28446.t1_Vsativa-uoa_v1 ID=jg28446.t1_Vsativa-uoa_v1; Name=jg28446.t1; organism=Vicia sativa; type=mRNA; length=838bp; location=Sequence derived from: Chr4:34580905..34581742+ (Vicia sativaback to top Coding sequence (CDS) from alignment at Chr4:34580905..34581742+ >jg28446.t1_Vsativa-uoa_v1 ID=jg28446.t1_Vsativa-uoa_v1; Name=jg28446.t1; organism=Vicia sativa; type=CDS; length=450bp; location=Sequence derived from: Chr4:34580905..34581742+ (Vicia sativaback to top |