jg39160.t1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of jg39160.t1 vs. UniProtKB/TrEMBL
Match: tr|G7IPB5|G7IPB5_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11415654 PE=4 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 2.553e-71 Identity = 118/148 (79.73%), Postives = 126/148 (85.14%), Query Frame = 0 Query: 1 MGRENHDPTIV-HSSIALLQERFRQLERVKEMREERELKRMLNEPKQ--------QTYDQSTTRLFSSNHEFINPTRSSPPHVSLSLWPTTSSQVKQQDDQYYTSLKSPVSMNLCTTSYTQNMQANSWKNGYDCDSSSDSGVDTSLHL 139 MGRENHDPTIV HSSIALLQERFRQLERVKEMREERELK+MLNEPKQ YDQS TRLFSSNHE I P++SSPPHVSLSLWPTTS QQDD YYTS+KSPVSMNLCTT+YT+N+Q SWKNG+DCDS SDSGVDTSLHL Sbjct: 1 MGRENHDPTIVVHSSIALLQERFRQLERVKEMREERELKKMLNEPKQFNSNTIPSYDYDQS-TRLFSSNHELIIPSKSSPPHVSLSLWPTTS----QQDD-YYTSMKSPVSMNLCTTNYTKNLQT-SWKNGHDCDSPSDSGVDTSLHL 141
BLAST of jg39160.t1 vs. UniProtKB/TrEMBL
Match: tr|V7BRG1|V7BRG1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G141500g PE=4 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 8.074e-49 Identity = 94/145 (64.83%), Postives = 108/145 (74.48%), Query Frame = 0 Query: 1 MGRENHDPTIVHSSIALLQERFRQLERVKEMREERELKRMLNEPKQ------QTYDQSTTRLFSSNHEFINPTRSSPPHVSLSLWPTTSSQVKQQDDQYYTSLKSPVSMNLCTTSYTQNMQANSWKNGYDCDSSSDSGVDTSLHL 139 MGRE+HDPT HSSIALLQERFRQL+RVKEMREEREL++MLNEPKQ TY S T S+ E I P+ SSPPHVSLSLWPT SQ KQ+D Y S ++PVSMN ++Q++Q SWKN YDCDS +DSGVDTSLHL Sbjct: 1 MGRESHDPTSFHSSIALLQERFRQLQRVKEMREERELQKMLNEPKQFTSNSTLTYHNSNTSSILSHPELIMPS-SSPPHVSLSLWPT--SQGKQED---YRSPQTPVSMNYA---HSQSLQL-SWKNVYDCDSGADSGVDTSLHL 135
BLAST of jg39160.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A445GSH4|A0A445GSH4_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_040632 PE=4 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.593e-48 Identity = 93/149 (62.42%), Postives = 109/149 (73.15%), Query Frame = 0 Query: 1 MGRENHDPTIVHSSIALLQERFRQLERVKEMREERELKRMLNEPKQ----------QTYDQSTTRLFSSNHEFINPTRSSPPHVSLSLWPTTSSQVKQQDDQYYTSLKSPVSMNLCTTSYTQNMQANSWKNGYDCDSSSDSGVDTSLHL 139 MGR++HDPT HSSIALLQERFRQL+RVKEMREEREL++MLNEPKQ +TY S + S+ E I P+R SPPHVSLSLWPT SQ KQ+D Y S ++PVSMN ++Q+MQ SWKN YDCDS +DSGVDTSLHL Sbjct: 1 MGRDSHDPTSFHSSIALLQERFRQLQRVKEMREERELQKMLNEPKQFSSNTTTSMSRTYHNSNNSIL-SHPELIMPSR-SPPHVSLSLWPT--SQGKQED---YRSAQTPVSMNYA---HSQSMQV-SWKNIYDCDSGADSGVDTSLHL 138
BLAST of jg39160.t1 vs. UniProtKB/TrEMBL
Match: tr|K7MAV3|K7MAV3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_15G116700 PE=4 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.593e-48 Identity = 93/149 (62.42%), Postives = 109/149 (73.15%), Query Frame = 0 Query: 1 MGRENHDPTIVHSSIALLQERFRQLERVKEMREERELKRMLNEPKQ----------QTYDQSTTRLFSSNHEFINPTRSSPPHVSLSLWPTTSSQVKQQDDQYYTSLKSPVSMNLCTTSYTQNMQANSWKNGYDCDSSSDSGVDTSLHL 139 MGR++HDPT HSSIALLQERFRQL+RVKEMREEREL++MLNEPKQ +TY S + S+ E I P+R SPPHVSLSLWPT SQ KQ+D Y S ++PVSMN ++Q+MQ SWKN YDCDS +DSGVDTSLHL Sbjct: 1 MGRDSHDPTSFHSSIALLQERFRQLQRVKEMREERELQKMLNEPKQFSSNTTTSMSRTYHNSNNSIL-SHPELIMPSR-SPPHVSLSLWPT--SQGKQED---YRSAQTPVSMNYA---HSQSMQV-SWKNIYDCDSGADSGVDTSLHL 138
BLAST of jg39160.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A151T6I4|A0A151T6I4_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_017203 PE=4 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 2.323e-45 Identity = 90/147 (61.22%), Postives = 108/147 (73.47%), Query Frame = 0 Query: 1 MGRE--NHDPTIVHSSIALLQERFRQLERVKEMREERELKRMLNEPKQQTYDQSTTRLFSSNH------EFINPTRSSPPHVSLSLWPTTSSQVKQQDDQYYTSLKSPVSMNLCTTSYTQNMQANSWKNGYDCDSSSDSGVDTSLHL 139 M RE +HDPT HSSIALLQERFRQL+RVKEMREEREL++MLNEPKQ + +T +SN+ EFI P+R SPPHVSLSLWPT SQ K+ Y SL +P+SMN +++Q++Q SWKN YDCDS +DSGVDTSLHL Sbjct: 1 MARESHHHDPTSFHSSIALLQERFRQLQRVKEMREERELQKMLNEPKQFNSNTTTITYHNSNNSILSHPEFIMPSR-SPPHVSLSLWPT--SQTKED----YRSLHTPLSMN---HAHSQSLQV-SWKNVYDCDSGADSGVDTSLHL 136
BLAST of jg39160.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A445IVK3|A0A445IVK3_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_022851 PE=4 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 2.659e-45 Identity = 91/150 (60.67%), Postives = 108/150 (72.00%), Query Frame = 0 Query: 1 MGRENHDPTIVHSSIALLQERFRQLERVKEMREERELKRMLNEPKQ-----------QTYDQSTTRLFSSNHEFINPTRSSPPHVSLSLWPTTSSQVKQQDDQYYTSLKSPVSMNLCTTSYTQNMQANSWKNGYDCDSSSDSGVDTSLHL 139 MGR++HDPT HSSIALLQERFRQL+RVKEMREEREL++MLNEPKQ TY S + S+ E I P+R SPPHVSLSLWPT SQ KQ+D Y S ++PVSMN +++++MQ SWKN DCDS +DSGVDTSLHL Sbjct: 2 MGRDSHDPTSFHSSIALLQERFRQLQRVKEMREERELQKMLNEPKQFSSNTNTSISSSTYHNSNNSIL-SHPELIMPSR-SPPHVSLSLWPT--SQGKQED---YRSTQTPVSMNY---AHSRSMQV-SWKNANDCDSGADSGVDTSLHL 140
BLAST of jg39160.t1 vs. UniProtKB/TrEMBL
Match: tr|K7LB81|K7LB81_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_09G012000 PE=4 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 2.659e-45 Identity = 91/150 (60.67%), Postives = 108/150 (72.00%), Query Frame = 0 Query: 1 MGRENHDPTIVHSSIALLQERFRQLERVKEMREERELKRMLNEPKQ-----------QTYDQSTTRLFSSNHEFINPTRSSPPHVSLSLWPTTSSQVKQQDDQYYTSLKSPVSMNLCTTSYTQNMQANSWKNGYDCDSSSDSGVDTSLHL 139 MGR++HDPT HSSIALLQERFRQL+RVKEMREEREL++MLNEPKQ TY S + S+ E I P+R SPPHVSLSLWPT SQ KQ+D Y S ++PVSMN +++++MQ SWKN DCDS +DSGVDTSLHL Sbjct: 2 MGRDSHDPTSFHSSIALLQERFRQLQRVKEMREERELQKMLNEPKQFSSNTNTSISSSTYHNSNNSIL-SHPELIMPSR-SPPHVSLSLWPT--SQGKQED---YRSTQTPVSMNY---AHSRSMQV-SWKNANDCDSGADSGVDTSLHL 140
BLAST of jg39160.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3S3Y2|A0A0S3S3Y2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G092800 PE=4 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.036e-44 Identity = 90/145 (62.07%), Postives = 105/145 (72.41%), Query Frame = 0 Query: 1 MGRENHDPTIVHSSIALLQERFRQLERVKEMREERELKRMLNEPKQ------QTYDQSTTRLFSSNHEFINPTRSSPPHVSLSLWPTTSSQVKQQDDQYYTSLKSPVSMNLCTTSYTQNMQANSWKNGYDCDSSSDSGVDTSLHL 139 MGRE+HDPT HSSIALLQERFRQL+RVK+MREEREL++MLNEPKQ TY S T S+ EFI P+ +SPPHVSLSLWP SSQ KQ D Y S +PVS +++Q++Q SWKN YD DS +DSGVDTSLHL Sbjct: 1 MGRESHDPTSFHSSIALLQERFRQLQRVKQMREERELQKMLNEPKQFTSNSTLTYHNSNTCSILSHPEFIMPS-TSPPHVSLSLWP--SSQSKQDD---YASAPTPVS------THSQSLQL-SWKNVYDSDSGADSGVDTSLHL 132
BLAST of jg39160.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A371FI64|A0A371FI64_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_41799 PE=4 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 8.667e-43 Identity = 88/149 (59.06%), Postives = 106/149 (71.14%), Query Frame = 0 Query: 1 MGRENH-DPTIVHSSIALLQERFRQLERVKEMREERELKRMLNEPKQQTYDQSTTRLFS-------SNHEFINPTRSSPPHVSLSLWPTTSSQVKQQDDQYYTSLKSPVSMNLCTTSY-----TQNMQANSWKNGYDCDSSSDSGVDTS 136 MGRE+H DPT HSSIALLQERFRQL+RVKEMREE+EL++MLNEPKQ +TT + S+ E I P+R SPPHVSLSLWPT SQ KQ+D +T ++PVSMNLC T Y +Q++Q SWKN YDCDS +DSG + S Sbjct: 1 MGRESHRDPTSFHSSIALLQERFRQLQRVKEMREEKELQKMLNEPKQFNSTTTTTMAYHNSNNSILSHPELIMPSR-SPPHVSLSLWPT--SQGKQED---HTRPQTPVSMNLCPTDYNNYAHSQSLQV-SWKNVYDCDSGADSGNEMS 142
BLAST of jg39160.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NIQ0|A0A2Z6NIQ0_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_379410 PE=4 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 6.188e-41 Identity = 81/111 (72.97%), Postives = 90/111 (81.08%), Query Frame = 0 Query: 40 MLNEPKQ----------QTYDQSTTRLFSSNHEFINPTRSS-PPHVSLSLWPTTSSQVKQQDDQYYTSLKSPVSMNLCTTSYTQNMQANSWKNGYDCDSSSDSGVDTSLHL 139 MLNE KQ YDQST RLFSSNHE I P+RSS PPHVSLSLWPTTS QVK+Q+ +Y+TSLK+PVSMNLCTT+YTQNMQ+ SW NGYDCDS+SDSGVDTSLHL Sbjct: 1 MLNETKQFNSNNTTTPSYDYDQST-RLFSSNHELIIPSRSSSPPHVSLSLWPTTS-QVKEQE-EYFTSLKNPVSMNLCTTNYTQNMQS-SWNNGYDCDSASDSGVDTSLHL 107 The following BLAST results are available for this feature:
BLAST of jg39160.t1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-15 (Blastp of Vicia sativa cv. Studenica proteins vs UniProt TrEMBL) Total hits: 10
BLAST of jg39160.t1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-15 (Blastp of Vicia sativa cv. Studenica proteins vs UniProt Swissprot) Total hits: 0
BLAST of jg39160.t1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-15 (Blastp of Vicia sativa cv. Studenica proteins vs arabidopsis Araport11) Total hits: 0
InterPro
Analysis Name: InterProScan Analysis for Vicia sativa cv. Studenica genome v1.0
Date Performed: 2023-06-15
Sequences
The
following sequences are available for this feature:
mRNA sequence >jg39160.t1_Vsativa-uoa_v1 ID=jg39160.t1_Vsativa-uoa_v1; Name=jg39160.t1; organism=Vicia sativa; type=mRNA; length=420bpback to top protein sequence of jg39160.t1_Vsativa-uoa_v1 >jg39160.t1_Vsativa-uoa_v1 ID=jg39160.t1_Vsativa-uoa_v1; Name=jg39160.t1_Vsativa-uoa_v1; organism=Vicia sativa; type=polypeptide; length=139bpback to top mRNA from alignment at Chr1:32083159..32083578+ Legend: exonCDSstart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.>jg39160.t1_Vsativa-uoa_v1 ID=jg39160.t1_Vsativa-uoa_v1; Name=jg39160.t1; organism=Vicia sativa; type=mRNA; length=420bp; location=Sequence derived from: Chr1:32083159..32083578+ (Vicia sativaback to top Coding sequence (CDS) from alignment at Chr1:32083159..32083578+ >jg39160.t1_Vsativa-uoa_v1 ID=jg39160.t1_Vsativa-uoa_v1; Name=jg39160.t1; organism=Vicia sativa; type=CDS; length=420bp; location=Sequence derived from: Chr1:32083159..32083578+ (Vicia sativaback to top |