jg40896.t1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of jg40896.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y098|A0A1S2Y098_CICAR (uncharacterized protein LOC101514677 OS=Cicer arietinum OX=3827 GN=LOC101514677 PE=4 SV=1) HSP 1 Score: 329.717 bits (844), Expect = 7.903e-113 Identity = 164/181 (90.61%), Postives = 170/181 (93.92%), Query Frame = 0 Query: 23 VVQSSAAALNGNTMKIHPAPRKRNITIQFGTNGSNPASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHGHEMQNVEGGDSGRGMGGRLVLVQ 203 VVQSS A LNGN+MK+HP PRKRNITIQFGTNG N ASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVA+EE DCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLE+DMWRFRLPDSTMPELASAVFVDGELIVTVPK GH++QNVEGGDS R MGGRLVLVQ Sbjct: 19 VVQSSVA-LNGNSMKVHPVPRKRNITIQFGTNGGNTASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDSTMPELASAVFVDGELIVTVPK--GHDLQNVEGGDSDRDMGGRLVLVQ 196
BLAST of jg40896.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A396JUM2|A0A396JUM2_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr1g0205281 PE=4 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 2.414e-101 Identity = 165/204 (80.88%), Postives = 175/204 (85.78%), Query Frame = 0 Query: 1 MIVSSIGKRILIGVIILLFVVVVVQSSAAALNGNTMKIHPAPRKRNITIQFGTNGSNPASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHGHEMQNVE-GGDSGRGMGGRLVLVQ 203 MI+SSI + L ++ILL VVQSS A MKIHP PRKRNITIQFGT+ NP+SEAQ LLGISGKKLRRLPHVFSRVLELPFRSDADVA+EE ADCFRFVAETEGIGEVR HTVEIHPGVTKIVVRDGESLELSLDQLE+DMWRFRLPDST+PELASAVFVDGELIVTVPK GHE+QNVE GG G G GGRLVLVQ Sbjct: 1 MILSSIQNQNLFVILILL----VVQSSVAL----KMKIHPVPRKRNITIQFGTDAGNPSSEAQTLLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAADCFRFVAETEGIGEVRAHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDSTLPELASAVFVDGELIVTVPK--GHEVQNVEGGGGMGGGGGGRLVLVQ 194
BLAST of jg40896.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A072VPF4|A0A072VPF4_MEDTR (Heat shock 22 kDa protein OS=Medicago truncatula OX=3880 GN=25485194 PE=4 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 5.117e-96 Identity = 150/169 (88.76%), Postives = 156/169 (92.31%), Query Frame = 0 Query: 36 MKIHPAPRKRNITIQFGTNGSNPASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHGHEMQNVE-GGDSGRGMGGRLVLVQ 203 MKIHP PRKRNITIQFGT+ NP+SEAQ LLGISGKKLRRLPHVFSRVLELPFRSDADVA+EE ADCFRFVAETEGIGEVR HTVEIHPGVTKIVVRDGESLELSLDQLE+DMWRFRLPDST+PELASAVFVDGELIVTVPK GHE+QNVE GG G G GGRLVLVQ Sbjct: 1 MKIHPVPRKRNITIQFGTDAGNPSSEAQTLLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAADCFRFVAETEGIGEVRAHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDSTLPELASAVFVDGELIVTVPK--GHEVQNVEGGGGMGGGGGGRLVLVQ 167
BLAST of jg40896.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6P050|A0A2Z6P050_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_46150 PE=4 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 1.600e-95 Identity = 138/151 (91.39%), Postives = 145/151 (96.03%), Query Frame = 0 Query: 36 MKIHPAPRKRNITIQFGTNGSNPASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHGHEMQNV 186 MKIHP PRKRNITIQFGT+G NP+SEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVA+EEE DCFRFVAET+GIGEVRTHTVEIHPGV KIVVRDGESLELSLDQLEIDMWRFRLPDST+PELASAVFVDGELIVTVPK GH++QNV Sbjct: 1 MKIHPVPRKRNITIQFGTDGGNPSSEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEEPDCFRFVAETDGIGEVRTHTVEIHPGVVKIVVRDGESLELSLDQLEIDMWRFRLPDSTLPELASAVFVDGELIVTVPK--GHDLQNV 149
BLAST of jg40896.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3P4V5|A0A2K3P4V5_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g006896 PE=4 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 1.948e-95 Identity = 146/169 (86.39%), Postives = 155/169 (91.72%), Query Frame = 0 Query: 36 MKIHPAPRKRNITIQFGTNGSNPASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHGHEMQNVE-GGDSGRGMGGRLVLVQ 203 MKIHP PRKRNITIQFGT+G NP+SEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVA+EE DCFRFVAET+GIGEVRTHTVEIHPGV KIVVRDGESLELSLDQLE+DMWRFRLPDST+PELASAVFVDGELIVTVPK GH++QNVE G + GGRLVLVQ Sbjct: 1 MKIHPVPRKRNITIQFGTDGGNPSSEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAETDGIGEVRTHTVEIHPGVVKIVVRDGESLELSLDQLELDMWRFRLPDSTLPELASAVFVDGELIVTVPK--GHDLQNVEGGDNGRGMGGGRLVLVQ 167
BLAST of jg40896.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A151U6V2|A0A151U6V2_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_007715 PE=4 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 4.796e-95 Identity = 135/165 (81.82%), Postives = 152/165 (92.12%), Query Frame = 0 Query: 15 IILLFVVVVVQSSAAALNGNTMKIHPAPRKRNITIQFGTNGSNPASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGH 179 II+ +++VVQSSAA++ GN MK+HP PRKRNI+IQFG +G NP SEAQALLGI+GKKLRRLPHVFS VLELPFRSDADVA+EE ADCFRFVAET+GIG+VR HTVEIHPGVTKIVVR+G S+ELSLDQLE+DMWRFRLP+ST PELASAVFVDGELIVTVPKGH Sbjct: 8 IIIAVLILVVQSSAASVQGNIMKVHPVPRKRNISIQFGVDGGNPMSEAQALLGIAGKKLRRLPHVFSCVLELPFRSDADVAVEEAADCFRFVAETDGIGDVRAHTVEIHPGVTKIVVREGGSVELSLDQLELDMWRFRLPESTRPELASAVFVDGELIVTVPKGH 172
BLAST of jg40896.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A165D0X1|A0A165D0X1_PHAVU (Nodulin 22 OS=Phaseolus vulgaris OX=3885 GN=Nod22 PE=2 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 1.126e-94 Identity = 148/202 (73.27%), Postives = 168/202 (83.17%), Query Frame = 0 Query: 6 IGKRILIGVIILLFVVVVVQSSAA--ALNGNTMKIHPAPRKRNITIQFGTNGSNPASEAQALLGISG-KKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHGHEMQNVEGGDSGRGM-GGRLVLVQ 203 I K LI ++I+ +++V+QSSAA + + MK+HP PRKRNI+IQFG +G NP SEAQALLGI+G KKLRRLPHVFS VLELPFRSDADV +EE+ DCFRFVAETEGIG+VR HT+EIHPGVTKIVVRDG S+ELSLDQLE+DMWRFRLP+ST PELASAVFVDGELIVTVPKGHG E GD R M GGRLVLVQ Sbjct: 2 IQKVSLIFIVIIAVLILVLQSSAAFHSSKNSIMKVHPVPRKRNISIQFGVDGGNPMSEAQALLGIAGSKKLRRLPHVFSCVLELPFRSDADVVVEEDPDCFRFVAETEGIGDVRAHTIEIHPGVTKIVVRDGGSVELSLDQLELDMWRFRLPESTRPELASAVFVDGELIVTVPKGHGE-----EDGDGDRVMGGGRLVLVQ 198
BLAST of jg40896.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0ELT8|A0A3Q0ELT8_VIGRR (uncharacterized protein LOC106780183 isoform X5 OS=Vigna radiata var. radiata OX=3916 GN=LOC106780183 PE=4 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 6.494e-91 Identity = 136/184 (73.91%), Postives = 155/184 (84.24%), Query Frame = 0 Query: 14 VIILLFVVVVVQSSAAALNGNT---MKIHPAPRKRNITIQFGTNGSNPASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHGHEMQNVEGGDSGRG 194 V ++ V+++V S+AAL+G+ MK+HP PRKRNI+IQFG +G NP SEAQALLGI+GKKLRRLPHVFS VLELPFRSDADV +EE+ DCFRFVAET+GI +VR HTVEIHPGVTKIVVRDG S+ELSLDQLE+DMWRFRLP+ST PELASAVFVDGELIVTVPKGHG E GD RG Sbjct: 9 VFFIIAVLILVAQSSAALHGSKNSIMKVHPVPRKRNISIQFGVDGGNPMSEAQALLGIAGKKLRRLPHVFSCVLELPFRSDADVVVEEDPDCFRFVAETDGIVDVRAHTVEIHPGVTKIVVRDGGSVELSLDQLELDMWRFRLPESTRPELASAVFVDGELIVTVPKGHGE-----EDGDGDRG 187
BLAST of jg40896.t1 vs. UniProtKB/TrEMBL
Match: tr|V7BCG9|V7BCG9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G058000g PE=4 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 8.195e-91 Identity = 142/183 (77.60%), Postives = 155/183 (84.70%), Query Frame = 0 Query: 25 QSSAA--ALNGNTMKIHPAPRKRNITIQFGTNGSNPASEAQALLGISG-KKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHGHEMQNVEGGDSGRGM-GGRLVLVQ 203 QSSAA + + MK+HP PRKRNI+IQFG +G NP SEAQALLGI+G KKLRRLPHVFS VLELPFRSDADV +EE+ DCFRFVAETEGIG+VR HT+EIHPGVTKIVVRDG S+ELSLDQLE+DMWRFRLP+ST PELASAVFVDGELIVTVPKGHG E GD R M GGRLVLVQ Sbjct: 21 QSSAAFHSSKNSIMKVHPVPRKRNISIQFGVDGGNPMSEAQALLGIAGSKKLRRLPHVFSCVLELPFRSDADVVVEEDPDCFRFVAETEGIGDVRAHTIEIHPGVTKIVVRDGGSVELSLDQLELDMWRFRLPESTRPELASAVFVDGELIVTVPKGHGE-----EDGDGDRVMGGGRLVLVQ 198
BLAST of jg40896.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0EQB9|A0A3Q0EQB9_VIGRR (uncharacterized protein LOC106780183 isoform X4 OS=Vigna radiata var. radiata OX=3916 GN=LOC106780183 PE=4 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 8.666e-91 Identity = 136/184 (73.91%), Postives = 155/184 (84.24%), Query Frame = 0 Query: 14 VIILLFVVVVVQSSAAALNGNT---MKIHPAPRKRNITIQFGTNGSNPASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHGHEMQNVEGGDSGRG 194 V ++ V+++V S+AAL+G+ MK+HP PRKRNI+IQFG +G NP SEAQALLGI+GKKLRRLPHVFS VLELPFRSDADV +EE+ DCFRFVAET+GI +VR HTVEIHPGVTKIVVRDG S+ELSLDQLE+DMWRFRLP+ST PELASAVFVDGELIVTVPKGHG E GD RG Sbjct: 9 VFFIIAVLILVAQSSAALHGSKNSIMKVHPVPRKRNISIQFGVDGGNPMSEAQALLGIAGKKLRRLPHVFSCVLELPFRSDADVVVEEDPDCFRFVAETDGIVDVRAHTVEIHPGVTKIVVRDGGSVELSLDQLELDMWRFRLPESTRPELASAVFVDGELIVTVPKGHGE-----EDGDGDRG 187
BLAST of jg40896.t1 vs. Araport11
Match: AT3G22530.1 (| heat shock protein | Chr3:7977774-7978370 REVERSE LENGTH=198 | 201606) HSP 1 Score: 172.555 bits (436), Expect = 2.304e-54 Identity = 98/179 (54.75%), Postives = 116/179 (64.80%), Query Frame = 0 Query: 32 NGNTMKIHPAPRKRNITIQFGTNGSNPASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGI----GEVRTHTVEIHPGVTKIVVRDG--ESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHGHE-MQNVEGGDSGRGMGGRLVLVQ 203 N M++HP PR N T+ + NP E GK LRRLPH+F+RVLELP RS+ADVA+EE DCFRFVAET G+ GE+R + VEIHPG+TKIVVR SL LSLD+LE+D+WRFRLP+ST PEL + VDG+LIVTVPK E G GRLVLVQ Sbjct: 28 NPEAMRVHPIPRNINNTL-IHHHHHNPTREP-------GKNLRRLPHIFNRVLELPLRSEADVAVEERHDCFRFVAETVGLCNGDGEMRAYMVEIHPGITKIVVRTNGSSSLGLSLDELELDVWRFRLPESTRPELVTVACVDGDLIVTVPKNAEEEDDDGGGGDFGQGIGSGRLVLVQ 198
BLAST of jg40896.t1 vs. Araport11
Match: AT4G14830.1 (| 17.6 kDa class II heat shock protein | Chr4:8510983-8511441 FORWARD LENGTH=152 | 201606) HSP 1 Score: 157.147 bits (396), Expect = 6.560e-49 Identity = 98/173 (56.65%), Postives = 115/173 (66.47%), Query Frame = 0 Query: 36 MKIHPAPRKRNITIQFGTNGSNPASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETE--GIGEVRTHTVEIHPGVTKIVVRDG--ESLELSLDQLEIDMWRFRLPDSTMPELASA-VFVDGELIVTVPKGHGHEMQNVEGGDSGRGMGGRLVLVQ 203 MKIHP PR N +N A+ GKKLRRLPH+FSRVLELP +SDADVA+EE DCFRFVAET+ G G VR + VEIHPGVTKI+VR SL LSLD+LE+D+WRFRLP+ST PEL + DGELIVTVPK +E D+GR + +VLVQ Sbjct: 1 MKIHPLPR--------NENNNNLIHHARDPTREPGKKLRRLPHIFSRVLELPLKSDADVAVEESHDCFRFVAETDGGGGGGVRAYMVEIHPGVTKILVRTNGSSSLGLSLDELELDVWRFRLPESTRPELVTVDCDGDGELIVTVPK--------IE--DNGRDL---IVLVQ 152 The following BLAST results are available for this feature:
BLAST of jg40896.t1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-15 (Blastp of Vicia sativa cv. Studenica proteins vs UniProt TrEMBL) Total hits: 10
BLAST of jg40896.t1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-15 (Blastp of Vicia sativa cv. Studenica proteins vs UniProt Swissprot) Total hits: 0
BLAST of jg40896.t1 vs. Araport11
Analysis Date: 2023-06-15 (Blastp of Vicia sativa cv. Studenica proteins vs arabidopsis Araport11) Total hits: 2
InterPro
Analysis Name: InterProScan Analysis for Vicia sativa cv. Studenica genome v1.0
Date Performed: 2023-06-15
Sequences
The
following sequences are available for this feature:
mRNA sequence >jg40896.t1_Vsativa-uoa_v1 ID=jg40896.t1_Vsativa-uoa_v1; Name=jg40896.t1; organism=Vicia sativa; type=mRNA; length=612bpback to top protein sequence of jg40896.t1_Vsativa-uoa_v1 >jg40896.t1_Vsativa-uoa_v1 ID=jg40896.t1_Vsativa-uoa_v1; Name=jg40896.t1_Vsativa-uoa_v1; organism=Vicia sativa; type=polypeptide; length=203bpback to top mRNA from alignment at Chr1:75674037..75674648- Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.>jg40896.t1_Vsativa-uoa_v1 ID=jg40896.t1_Vsativa-uoa_v1; Name=jg40896.t1; organism=Vicia sativa; type=mRNA; length=612bp; location=Sequence derived from: Chr1:75674037..75674648- (Vicia sativaback to top Coding sequence (CDS) from alignment at Chr1:75674037..75674648- >jg40896.t1_Vsativa-uoa_v1 ID=jg40896.t1_Vsativa-uoa_v1; Name=jg40896.t1; organism=Vicia sativa; type=CDS; length=612bp; location=Sequence derived from: Chr1:75674037..75674648- (Vicia sativaback to top |