jg40948.t1

Transcript Overview
Namejg40948.t1
Unique Namejg40948.t1_Vsativa-uoa_v1
TypemRNA
OrganismVicia sativa (vetch)
Sequence length375
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr1chromosomeChr1:77379999..77380461 -Vicia sativa cv. Studenica genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anvssL0726Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvssL0740Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvssL0907Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvssL388Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvssL392Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvssL1221Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvssL1305Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivssL0405Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivssL0419Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavssL202Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavssL306Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavssL312Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvssL0278Cajanus cajan Asha genome v1.0Cajanus cajan
ccvssL0644Cajanus cajan Asha genome v1.0Cajanus cajan
crvssL245Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvssL362Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvssL374Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvssL241Pisum sativum Cameor genome v1aPisum sativum
psvssL686Pisum sativum Cameor genome v1aPisum sativum
psvssL695Pisum sativum Cameor genome v1aPisum sativum
pvvssL000Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvssL346Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvssL353Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvssL667Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vrvvssL301Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvssL748Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvssL754Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvssR058Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvssR093Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuR011Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vssvuR139Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vssvuaR001Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vsszwsR047Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vssvuaR108Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vsszwsR076Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vsszwsR077Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvssL173Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvssL262Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvssL268Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvssL372Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvssL377Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvssL476Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvssL176Cicer arietinum
carvssL275Cicer arietinum
carvssL280Cicer arietinum
ccavssL218Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavssL226Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavssL300Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vssvumR035Vigna umbellata FF25 genome v1.0Vigna umbellata
vssvumR050Vigna umbellata FF25 genome v1.0Vigna umbellata
vssvumR117Vigna umbellata FF25 genome v1.0Vigna umbellata
vssvvaR000Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vssvvaR159Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vssvstR085Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vssvstR151Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvssL136Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvssL427Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvssL740Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvssL754Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvssL003Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvssL238Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvssL612Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvssL618Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vssvunR001Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vssvunR121Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigan.08G068800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
evm.model.Chr07.537Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Va02G066100.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-KK1_007686Cajanus cajan Asha genome v1.0Cajanus cajan
Ca_04559Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
XM_058918647.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigun07g235600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Ca_10376.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigst.08G054600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigun07g235600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vum_08G00555.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Cc_v2.0_04814.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Phvul.007G061300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat06G0554700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
LR48_mrnaVigan02g221300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
PvulFLAVERTChr07.1000402Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-XM_004496628.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_014657322.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Cr_08477.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jg40948jg40948_Vsativa-uoa_v1Vicia sativagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
jg40948.t1.exon1jg40948.t1.exon1_Vsativa-uoa_v1Vicia sativaexon
jg40948.t1.exon2jg40948.t1.exon2_Vsativa-uoa_v1Vicia sativaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
jg40948.t1.CDS1jg40948.t1.CDS1_Vsativa-uoa_v1Vicia sativaCDS
jg40948.t1.CDS2jg40948.t1.CDS2_Vsativa-uoa_v1Vicia sativaCDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
jg40948.t1.stop1jg40948.t1.stop1_Vsativa-uoa_v1Vicia sativastop_codon


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
jg40948.t1.intron1jg40948.t1.intron1_Vsativa-uoa_v1Vicia sativaintron


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
jg40948.t1.start1jg40948.t1.start1_Vsativa-uoa_v1Vicia sativastart_codon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jg40948.t1_Vsativa-uoa_v1jg40948.t1_Vsativa-uoa_v1Vicia sativapolypeptide
jg40948.t1_Vsativa-uoa_v1jg40948.t1_Vsativa-uoa_v1-proteinVicia sativapolypeptide


Homology
[Close]
BLAST of jg40948.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y0S8|A0A1S2Y0S8_CICAR (Epidermal patterning factor-like protein OS=Cicer arietinum OX=3827 GN=LOC101505332 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.497e-52
Identity = 89/124 (71.77%), Postives = 98/124 (79.03%), Query Frame = 0 
Query:    1 MCVLRHLHHRKHHHNHHWFLLSTFLFLLFSSSSALTTLAPQPSTGTVKYEETKNLSPASPWERDMTQQKKLNGPGSAPPSCRSKCGWCNPCHPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFLP 124
            MC+L         H+HH FLL TF+FLLFSSSSA+T LAPQPS+ TVK  E +N SP     R+  +QKKL GPGSAPPSCRSKCGWC PC+PVHVPVQPGLIIRLEYYPEAWRCKCGNKLFLP
Sbjct:    1 MCIL---------HHHHCFLLPTFIFLLFSSSSAITILAPQPSSRTVK--EVENGSPT----RETAEQKKLGGPGSAPPSCRSKCGWCTPCNPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFLP 109
[Close]
BLAST of jg40948.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3LF62|A0A2K3LF62_TRIPR (Epidermal patterning factor-like protein OS=Trifolium pratense OX=57577 GN=L195_g033131 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.441e-49
Identity = 75/95 (78.95%), Postives = 86/95 (90.53%), Query Frame = 0 
Query:   30 SSSSALTTLAPQPSTGTVKYEETKNLSPASPWERDMTQQKKLNGPGSAPPSCRSKCGWCNPCHPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFLP 124
            SS+ A+T LAPQPS+GTVK+++ +N SPAS W+R++ +QKKL GPGS PPSCRSKCGWCNPCHPVHVPVQPG IIRLEYYPEAWRCKCGNKLFLP
Sbjct:   25 SSTFAITILAPQPSSGTVKHKDKENGSPASQWKREVAEQKKLGGPGSTPPSCRSKCGWCNPCHPVHVPVQPGFIIRLEYYPEAWRCKCGNKLFLP 119
[Close]
BLAST of jg40948.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A072VQ74|A0A072VQ74_MEDTR (Epidermal patterning factor-like protein OS=Medicago truncatula OX=3880 GN=MTR_1g102940 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.056e-48
Identity = 86/127 (67.72%), Postives = 101/127 (79.53%), Query Frame = 0 
Query:    1 MCVLRHLHHRKHHHNHHWFLLSTFLFLLFSSSSALTTLAPQPST-GTV-KYEETKNLSPASPWE-RDMTQQKKLNGPGSAPPSCRSKCGWCNPCHPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFLP 124
            MCVLRH        +H ++LL TF+FLLFSSSSA+T LAPQPS+ GTV K+++ +N SP SPW+ R++ +QKKL GPGS PPSCRSKC  CNPC PV +PV PGLIIRLEYYPEAWRCKCGNK FLP
Sbjct:    1 MCVLRH-----PGKHHCFWLLPTFIFLLFSSSSAITLLAPQPSSSGTVLKHQKMENGSPTSPWKKREVVEQKKLAGPGSTPPSCRSKCSSCNPCQPVRMPVHPGLIIRLEYYPEAWRCKCGNKYFLP 122
[Close]
BLAST of jg40948.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A445ISJ3|A0A445ISJ3_GLYSO (Epidermal patterning factor-like protein OS=Glycine soja OX=3848 GN=D0Y65_028014 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.286e-44
Identity = 69/104 (66.35%), Postives = 81/104 (77.88%), Query Frame = 0 
Query:   21 LSTFLFLLFSSSSALTTLAPQPSTGTVKYEETKNLSPASPWERDMTQQKKLNGPGSAPPSCRSKCGWCNPCHPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFLP 124
             +TF  L FSS+SA+T LAP PS G VK    +     SP +R + ++K+  GPGS+PPSCRSKCGWC+PC PVHVPVQPGLIIRLEYYPEAWRCKCGNKLF+P
Sbjct:   19 FTTFSLLFFSSTSAITNLAPHPSGGAVKQLNQEEKQNGSPVDRVVAEEKRFGGPGSSPPSCRSKCGWCSPCFPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFMP 122
[Close]
BLAST of jg40948.t1 vs. UniProtKB/TrEMBL
Match: tr|I1LE16|I1LE16_SOYBN (Epidermal patterning factor-like protein OS=Glycine max OX=3847 GN=100815004 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.286e-44
Identity = 69/104 (66.35%), Postives = 81/104 (77.88%), Query Frame = 0 
Query:   21 LSTFLFLLFSSSSALTTLAPQPSTGTVKYEETKNLSPASPWERDMTQQKKLNGPGSAPPSCRSKCGWCNPCHPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFLP 124
             +TF  L FSS+SA+T LAP PS G VK    +     SP +R + ++K+  GPGS+PPSCRSKCGWC+PC PVHVPVQPGLIIRLEYYPEAWRCKCGNKLF+P
Sbjct:   19 FTTFSLLFFSSTSAITNLAPHPSGGAVKQLNQEEKQNGSPVDRVVAEEKRFGGPGSSPPSCRSKCGWCSPCFPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFMP 122
[Close]
BLAST of jg40948.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SMN7|A0A0S3SMN7_PHAAN (Epidermal patterning factor-like protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G068800 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.504e-43
Identity = 79/118 (66.95%), Postives = 92/118 (77.97%), Query Frame = 0 
Query:   11 KHHHNHHWF-LLSTFLFLLFSSSSALTTLAPQPSTGTVKY---EETKNLSPASPWERDMTQQKKLNGPGSAPPSCRSKCGWCNPCHPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFLP 124
            +HHH+ HW    +TF FL F S++A+TTL PQPS GTV +   EE +N SPA   ER +   K+  GPGS+PPSCRSKCGWC+PC PVHVPVQPGLIIRLEYYPEAWRCKCGNKLF+P
Sbjct:    2 RHHHHFHWLKAFTTFYFLFFYSAAAVTTLTPQPSGGTVNHLSREEKQNGSPAVTEERLVAGGKRFGGPGSSPPSCRSKCGWCSPCIPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFMP 119
[Close]
BLAST of jg40948.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TZP9|A0A0L9TZP9_PHAAN (Epidermal patterning factor-like protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g221300 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.504e-43
Identity = 79/118 (66.95%), Postives = 92/118 (77.97%), Query Frame = 0 
Query:   11 KHHHNHHWF-LLSTFLFLLFSSSSALTTLAPQPSTGTVKY---EETKNLSPASPWERDMTQQKKLNGPGSAPPSCRSKCGWCNPCHPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFLP 124
            +HHH+ HW    +TF FL F S++A+TTL PQPS GTV +   EE +N SPA   ER +   K+  GPGS+PPSCRSKCGWC+PC PVHVPVQPGLIIRLEYYPEAWRCKCGNKLF+P
Sbjct:    2 RHHHHFHWLKAFTTFYFLFFYSAAAVTTLTPQPSGGTVNHLSREEKQNGSPAVTEERLVAGGKRFGGPGSSPPSCRSKCGWCSPCIPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFMP 119
[Close]
BLAST of jg40948.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V387|A0A1S3V387_VIGRR (Epidermal patterning factor-like protein OS=Vigna radiata var. radiata OX=3916 GN=LOC106771353 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.097e-42
Identity = 80/118 (67.80%), Postives = 94/118 (79.66%), Query Frame = 0 
Query:   11 KHHHNHHWF-LLSTFLFLLFSSSSALTTLAPQPSTGTVKY---EETKNLSPASPWERDMTQQKKLNGPGSAPPSCRSKCGWCNPCHPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFLP 124
            +HHH+ HWF   +TF FL FSS++A+TTL PQPS G V +   EE +N SPA   ER +  +K+  GPGS+PPSCRSKCGWC+PC PVHVPVQPGLIIRLEYYPEAWRCKCGNKLF+P
Sbjct:    2 RHHHHFHWFKAFTTFSFLFFSSAAAVTTLTPQPSGGAVNHLNREEKQNGSPAVTEERLVAGEKRFGGPGSSPPSCRSKCGWCSPCIPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFMP 119
[Close]
BLAST of jg40948.t1 vs. UniProtKB/TrEMBL
Match: tr|V7BFM5|V7BFM5_PHAVU (Epidermal patterning factor-like protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G061300g PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 9.600e-42
Identity = 74/115 (64.35%), Postives = 88/115 (76.52%), Query Frame = 0 
Query:   11 KHHHNHHWF-LLSTFLFLLFSSSSALTTLAPQPSTGTVKYEETKNLSPASPWERDMTQQKKLNGPGSAPPSCRSKCGWCNPCHPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFLP 124
            +HHH+ HW    +TF FL FSS+SA+T L PQPS G + +   +     SP ER +  +K+  GPGS+PPSCRSKCGWC+PC PVHVPVQPGLIIRLEYYPEAWRCKCGNKLF+P
Sbjct:    2 RHHHHFHWLKTFTTFTFLFFSSASAVTALTPQPSGGALNHLNREENQNGSPVERLVAGEKRFGGPGSSPPSCRSKCGWCSPCIPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFMP 116
[Close]
BLAST of jg40948.t1 vs. UniProtKB/TrEMBL
Match: tr|A0A371HXK3|A0A371HXK3_MUCPR (Epidermal patterning factor-like protein (Fragment) OS=Mucuna pruriens OX=157652 GN=EPFL4 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.369e-41
Identity = 77/119 (64.71%), Postives = 90/119 (75.63%), Query Frame = 0 
Query:    7 LHHRKHHHNHHWF-LLSTFLFLLFSSSSALTTLAPQPSTGTVKYEETKNLSPASPWERDMTQQKKLNGPGSAPPSCRSKCGWCNPCHPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFLP 124
            +   KHHH+ HW    +TF FLLFSS+SA+TTL PQPS G V +   +     S  ER +  +K+  GPGS+PPSCRSKCGWC+PC PVHVPVQPGLIIRLEYYPEAWRCKCGNKLF+P
Sbjct:    4 MRRSKHHHHFHWLQTFTTFTFLLFSSTSAITTLTPQPSGGAVTHLNGEEKENGSAVERVVAAEKRFGGPGSSPPSCRSKCGWCSPCEPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFMP 122
[Close]
BLAST of jg40948.t1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LUH9|EPFL5_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.958e-28
Identity = 49/85 (57.65%), Postives = 56/85 (65.88%), Query Frame = 0 
Query:   40 PQPSTGTVKYEETKNLSPASPWERDMTQQKKLNGPGSAPPSCRSKCGWCNPCHPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFLP 124
            P    G  K E  ++  P       +  QK+L GPGS PP CR KCG C PC  VHVP+QPGLI+ LEYYPEAWRCKCGNKLF+P
Sbjct:   28 PSGGLGQGKKEIARSGLPG-----QIVDQKRLGGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107
[Close]
BLAST of jg40948.t1 vs. UniProtKB/Swiss-Prot
Match: sp|Q2V3I3|EPFL4_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 7.310e-28
Identity = 54/103 (52.43%), Postives = 67/103 (65.05%), Query Frame = 0 
Query:   23 TFLFL-LFSSSSALTTLAPQPSTGTVKYEETKNLSPASPWERDMTQQKKLNGPGSAPPSCRSKCGWCNPCHPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFLP 124
            TF  L LFS+SS ++      + G    + T +  P       +   K+  GPGS+PP+CRSKCG C PC PVHVP+QPGL + LEYYPEAWRCKCGNKLF+P
Sbjct:   17 TFALLHLFSASSIVS------ADGRWIGQRTGSDLPGG----FIRSNKRFGGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109
[Close]
BLAST of jg40948.t1 vs. UniProtKB/Swiss-Prot
Match: sp|Q1PEY6|EPFL6_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.390e-23
Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = 0 
Query:   39 APQPSTGTVKYEETKNLSPASPWERDMTQQKKLNGPGSAPPSCRSKCGWCNPCHPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFLP 124
            A +    TV  ++T+ +   S   ++   ++ L G GS+PP C SKCG C PC PVHVPV PG  +  EYYPEAWRCKCGNKL++P
Sbjct:   74 AKEEGKSTVVIKKTRKIGDRS---KEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156
[Close]
BLAST of jg40948.t1 vs. Araport11
Match: AT3G22820.1 (| allergen-like protein | Chr3:8073451-8074061 REVERSE LENGTH=107 | 201606)

HSP 1 Score: 102.064 bits (253), Expect = 4.050e-29
Identity = 49/85 (57.65%), Postives = 56/85 (65.88%), Query Frame = 0 
Query:   40 PQPSTGTVKYEETKNLSPASPWERDMTQQKKLNGPGSAPPSCRSKCGWCNPCHPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFLP 124
            P    G  K E  ++  P       +  QK+L GPGS PP CR KCG C PC  VHVP+QPGLI+ LEYYPEAWRCKCGNKLF+P
Sbjct:   28 PSGGLGQGKKEIARSGLPG-----QIVDQKRLGGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107
[Close]
BLAST of jg40948.t1 vs. Araport11
Match: AT4G14723.1 (| EPIDERMAL PATTERNING FACTOR-like protein | Chr4:8440167-8440693 FORWARD LENGTH=109 | 201606)

HSP 1 Score: 101.679 bits (252), Expect = 7.479e-29
Identity = 54/103 (52.43%), Postives = 67/103 (65.05%), Query Frame = 0 
Query:   23 TFLFL-LFSSSSALTTLAPQPSTGTVKYEETKNLSPASPWERDMTQQKKLNGPGSAPPSCRSKCGWCNPCHPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFLP 124
            TF  L LFS+SS ++      + G    + T +  P       +   K+  GPGS+PP+CRSKCG C PC PVHVP+QPGL + LEYYPEAWRCKCGNKLF+P
Sbjct:   17 TFALLHLFSASSIVS------ADGRWIGQRTGSDLPGG----FIRSNKRFGGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109
[Close]
BLAST of jg40948.t1 vs. Araport11
Match: AT2G30370.3 (| allergen-like protein | Chr2:12940577-12942579 REVERSE LENGTH=166 | 201606)

HSP 1 Score: 91.6633 bits (226), Expect = 2.485e-24
Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = 0 
Query:   39 APQPSTGTVKYEETKNLSPASPWERDMTQQKKLNGPGSAPPSCRSKCGWCNPCHPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFLP 124
            A +    TV  ++T+ +   S   ++   ++ L G GS+PP C SKCG C PC PVHVPV PG  +  EYYPEAWRCKCGNKL++P
Sbjct:   84 AKEEGKSTVVIKKTRKIGDRS---KEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 166
[Close]
BLAST of jg40948.t1 vs. Araport11
Match: AT2G30370.2 (| allergen-like protein | Chr2:12940577-12942167 REVERSE LENGTH=156 | 201606)

HSP 1 Score: 90.8929 bits (224), Expect = 3.469e-24
Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = 0 
Query:   39 APQPSTGTVKYEETKNLSPASPWERDMTQQKKLNGPGSAPPSCRSKCGWCNPCHPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFLP 124
            A +    TV  ++T+ +   S   ++   ++ L G GS+PP C SKCG C PC PVHVPV PG  +  EYYPEAWRCKCGNKL++P
Sbjct:   74 AKEEGKSTVVIKKTRKIGDRS---KEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156
[Close]
BLAST of jg40948.t1 vs. Araport11
Match: AT2G30370.1 (| allergen-like protein | Chr2:12940577-12942167 REVERSE LENGTH=230 | 201606)

HSP 1 Score: 91.6633 bits (226), Expect = 1.213e-23
Identity = 50/126 (39.68%), Postives = 68/126 (53.97%), Query Frame = 0 
Query:    2 CVLRHLHHRKHHHNHHWFLLSTFLFL---LFSSSSALTTLAPQPSTGTVKYEETKNLSPASPWERDMTQQKKLNGPGSAPPSCRSKCGWCNPCHPVHVPVQPGLIIRLEYYPEAWRCKCGNKLFLP 124
            C  + +  R+   + H    ST L +   L     A      +    TV  ++T+ +   S   ++   ++ L G GS+PP C SKCG C PC PVHVPV PG  +  EYYPEAWRCKCGNKL++P
Sbjct:  108 CTPKEILSRRIGFSAHEDKDSTQLLVRSPLVGPCLAYDLDRVEEGKSTVVIKKTRKIGDRS---KEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 230
The following BLAST results are available for this feature:
BLAST of jg40948.t1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-15 (Blastp of Vicia sativa cv. Studenica proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2Y0S8|A0A1S2Y0S8_CICAR1.497e-5271.77Epidermal patterning factor-like protein OS=Cicer ... [more]
tr|A0A2K3LF62|A0A2K3LF62_TRIPR1.441e-4978.95Epidermal patterning factor-like protein OS=Trifol... [more]
tr|A0A072VQ74|A0A072VQ74_MEDTR2.056e-4867.72Epidermal patterning factor-like protein OS=Medica... [more]
tr|A0A445ISJ3|A0A445ISJ3_GLYSO1.286e-4466.35Epidermal patterning factor-like protein OS=Glycin... [more]
tr|I1LE16|I1LE16_SOYBN1.286e-4466.35Epidermal patterning factor-like protein OS=Glycin... [more]
tr|A0A0S3SMN7|A0A0S3SMN7_PHAAN1.504e-4366.95Epidermal patterning factor-like protein OS=Vigna ... [more]
tr|A0A0L9TZP9|A0A0L9TZP9_PHAAN1.504e-4366.95Epidermal patterning factor-like protein OS=Phaseo... [more]
tr|A0A1S3V387|A0A1S3V387_VIGRR7.097e-4267.80Epidermal patterning factor-like protein OS=Vigna ... [more]
tr|V7BFM5|V7BFM5_PHAVU9.600e-4264.35Epidermal patterning factor-like protein OS=Phaseo... [more]
tr|A0A371HXK3|A0A371HXK3_MUCPR1.369e-4164.71Epidermal patterning factor-like protein (Fragment... [more]
back to top
BLAST of jg40948.t1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-15 (Blastp of Vicia sativa cv. Studenica proteins vs UniProt Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
sp|Q9LUH9|EPFL5_ARATH3.958e-2857.65EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arab... [more]
sp|Q2V3I3|EPFL4_ARATH7.310e-2852.43EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arab... [more]
sp|Q1PEY6|EPFL6_ARATH3.390e-2350.00EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arab... [more]
back to top
BLAST of jg40948.t1 vs. Araport11
Analysis Date: 2023-06-15 (Blastp of Vicia sativa cv. Studenica proteins vs arabidopsis Araport11)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G22820.14.050e-2957.65| allergen-like protein | Chr3:8073451-8074061 REV... [more]
AT4G14723.17.479e-2952.43| EPIDERMAL PATTERNING FACTOR-like protein | Chr4:... [more]
AT2G30370.32.485e-2450.00| allergen-like protein | Chr2:12940577-12942579 R... [more]
AT2G30370.23.469e-2450.00| allergen-like protein | Chr2:12940577-12942167 R... [more]
AT2G30370.11.213e-2339.68| allergen-like protein | Chr2:12940577-12942167 R... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Vicia sativa cv. Studenica genome v1.0
Date Performed: 2023-06-15
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF17181EPFcoord: 74..124
e-value: 3.8E-18
score: 65.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..75
IPR039455EPIDERMAL PATTERNING FACTOR-like proteinPANTHERPTHR33109EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4coord: 25..124

Sequences
The following sequences are available for this feature:

mRNA sequence

>jg40948.t1_Vsativa-uoa_v1 ID=jg40948.t1_Vsativa-uoa_v1; Name=jg40948.t1; organism=Vicia sativa; type=mRNA; length=375bp
ATGTGCGTACTACGCCACCTTCACCACCGCAAACACCACCATAACCATCA
CTGGTTCTTATTGTCCACTTTCCTTTTTCTCTTGTTCTCTTCTTCTTCAG
CGTTAACCACTCTCGCACCACAACCCAGTACCGGAACAGTGAAGTACGAG
GAAACTAAAAATCTGTCTCCAGCTTCACCGTGGGAGAGAGATATGACTCA
ACAGAAGAAGCTCAACGGTCCAGGTTCAGCTCCTCCTTCATGTAGATCCA
AGTGCGGTTGGTGCAACCCATGTCACCCGGTTCACGTTCCGGTTCAACCC
GGTTTAATCATACGGCTCGAGTATTATCCAGAAGCTTGGCGTTGCAAGTG
TGGGAACAAGCTTTTTTTGCCGTGA
back to top

protein sequence of jg40948.t1_Vsativa-uoa_v1

>jg40948.t1_Vsativa-uoa_v1 ID=jg40948.t1_Vsativa-uoa_v1; Name=jg40948.t1_Vsativa-uoa_v1; organism=Vicia sativa; type=polypeptide; length=124bp
MCVLRHLHHRKHHHNHHWFLLSTFLFLLFSSSSALTTLAPQPSTGTVKYE
ETKNLSPASPWERDMTQQKKLNGPGSAPPSCRSKCGWCNPCHPVHVPVQP
GLIIRLEYYPEAWRCKCGNKLFLP
back to top

mRNA from alignment at Chr1:77379999..77380461-

Legend: polypeptideexonCDSstart_codonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>jg40948.t1_Vsativa-uoa_v1 ID=jg40948.t1_Vsativa-uoa_v1; Name=jg40948.t1; organism=Vicia sativa; type=mRNA; length=463bp; location=Sequence derived from: Chr1:77379999..77380461- (Vicia sativa
ATGTGCGTACTACGCCACCTTCACCACCGCAAACACCACCATAACCATCA
CTGGTTCTTATTGTCCACTTTCCTTTTTCTCTTGTTCTCTTCTTCTTCAG
CGTTAACCACTCTCGCACCACAACCCAGTAAGTTCTTTTCATCCAAAAAA
AACACTAACACAAACAAACCATTCTCTTTTCATATTTCAATTCCAACAAC
TCACTTTTGTTTCAGGTACCGGAACAGTGAAGTACGAGGAAACTAAAAAT
CTGTCTCCAGCTTCACCGTGGGAGAGAGATATGACTCAACAGAAGAAGCT
CAACGGTCCAGGTTCAGCTCCTCCTTCATGTAGATCCAAGTGCGGTTGGT
GCAACCCATGTCACCCGGTTCACGTTCCGGTTCAACCCGGTTTAATCATA
CGGCTCGAGTATTATCCAGAAGCTTGGCGTTGCAAGTGTGGGAACAAGCT
TTTTTTGCCGTGA
back to top

Coding sequence (CDS) from alignment at Chr1:77379999..77380461-

>jg40948.t1_Vsativa-uoa_v1 ID=jg40948.t1_Vsativa-uoa_v1; Name=jg40948.t1; organism=Vicia sativa; type=CDS; length=375bp; location=Sequence derived from: Chr1:77379999..77380461- (Vicia sativa
ATGTGCGTACTACGCCACCTTCACCACCGCAAACACCACCATAACCATCA
CTGGTTCTTATTGTCCACTTTCCTTTTTCTCTTGTTCTCTTCTTCTTCAG
CGTTAACCACTCTCGCACCACAACCCAGTACCGGAACAGTGAAGTACGAG
GAAACTAAAAATCTGTCTCCAGCTTCACCGTGGGAGAGAGATATGACTCA
ACAGAAGAAGCTCAACGGTCCAGGTTCAGCTCCTCCTTCATGTAGATCCA
AGTGCGGTTGGTGCAACCCATGTCACCCGGTTCACGTTCCGGTTCAACCC
GGTTTAATCATACGGCTCGAGTATTATCCAGAAGCTTGGCGTTGCAAGTG
TGGGAACAAGCTTTTTTTGCCGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR039455EPFL
Vocabulary: Biological Process
TermDefinition
GO:0010374stomatal complex development