rna-XM_004486091.3
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Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-XM_004486091.3 vs. Araport11
Match: | (Symbols: LUL3, AtVBP1, VBP1 | LOG2-LIKE UBIQUITIN LIGASE3, VrUBC1 Binding Partner 1 | chr5:6378400-6380287 FORWARD LENGTH=378) HSP 1 Score: 337.421 bits (864), Expect = 5.477e-114 Identity = 167/272 (61.40%), Postives = 208/272 (76.47%), Query Frame = 0
Query: 109 WAPPPPSSSTAPPPYVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSS----TAADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKVNNSDR 376
+ P P + P PYV+HQTAKK++N+VNV+K T+RL D +P H+LVSFVFDA++DGS TI +F +EE KC VP P+AF P+KVPFQKG GQKF Q GTGIDLGFF LDDLSKPSP E+V+PLVI AET + S ++ P HKQITQAVLEK+N DG+F++KV++QILWI+G RYEL+ELYGI +S TAA + GKECVIC+TEPKDTAV+PCRH+C+CS+CA+ LR Q+NKCPICRQ I EL++IKV +SD
Sbjct: 114 FGPTPVAVMEPPAPYVEHQTAKKVKNDVNVNKATVRLVADDLNPGHYLVSFVFDALFDGSFTIIFFGEEESKCTIVPHLPEAFPPIKVPFQKGAGQKFLQAPGTGIDLGFFSLDDLSKPSP-EEVYPLVISAETVISPSSVSEEP-------LVHKQITQAVLEKTN-DGSFKVKVMKQILWIEGERYELQELYGIDNSITQGTAASGLEDTGGKECVICLTEPKDTAVMPCRHLCLCSDCAEELRFQTNKCPICRQPIHELVKIKVESSDE 376
BLAST of rna-XM_004486091.3 vs. Araport11
Match: | (Symbols: LUL4 | LOG2-LIKE UBIQUITIN LIGASE4 | chr3:1856993-1858777 REVERSE LENGTH=359) HSP 1 Score: 333.569 bits (854), Expect = 1.009e-112 Identity = 163/255 (63.92%), Postives = 199/255 (78.04%), Query Frame = 0
Query: 123 YVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAAD-FDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKVNNSDR 376
Y++ Q AKK+RN+VNVH+ T+RL++D P HHLVSFVFDA++DGS TI +FAKEE C +PQFP+ + P + FQKG GQKF QPSGTG DL FF LDDLSKP EDV+PLVI AET + +P+ ++ HKQ+TQAVLEK N DG+F++KVV+QILWI+GVRYELRELYG + AA D+S +G ECVICMTE KDTAVLPCRH+CMCS+CAK LR+QSNKCPICRQ IEEL+EIK+N+SD
Sbjct: 112 YLEQQNAKKVRNDVNVHRDTVRLEVDDLVPGHHLVSFVFDALFDGSFTITFFAKEEPNCTIIPQFPEVYSPTRFHFQKGPGQKFLQPSGTGTDLSFFVLDDLSKPLE-EDVYPLVISAETII-------SPNSISEQSSVHKQVTQAVLEKDN-DGSFKVKVVKQILWIEGVRYELRELYGSTTQGAASGLDESGSGTECVICMTEAKDTAVLPCRHLCMCSDCAKELRLQSNKCPICRQPIEELLEIKMNSSDE 357
BLAST of rna-XM_004486091.3 vs. Araport11
Match: | (Symbols: AtAIRP3, AIRP3, LOG2 | ABA insensitive RING protein 3, LOSS OF GDU 2 | chr3:2996402-2997835 REVERSE LENGTH=388) HSP 1 Score: 261.922 bits (668), Expect = 3.105e-84 Identity = 129/257 (50.19%), Postives = 174/257 (67.70%), Query Frame = 0
Query: 120 PPPYVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAADFDDSDT----GKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKVN 372
P PYV+HQ A IRN+VN+ K +LRL+ D +P LVSF FDA G I++ +FAKE E CK D P+ + F+KG+GQKF Q SG+GID FE +L K + +++PL + AE PS + ++ + + + QITQAV EK G+ +I+VV+QILW++G RYEL+E+YGIG++ D D +D GKECVIC++EP+DT VLPCRHMCMCS CAK LR Q+N+CPICRQ +E L+EIKV+
Sbjct: 120 PTPYVEHQKAVTIRNDVNLKKESLRLEPDPDNPGRFLVSFTFDATVSGRISVIFFAKESEDCKLTATKEDILPPITLDFEKGLGQKFKQSSGSGIDFSVFEDVELFKAAADTEIYPLAVKAEA---APSGGENEEEER-SGSKNAQITQAVYEKDKGE--IKIRVVKQILWVNGTRYELQEIYGIGNTVEGDDDSADDANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVH 370
BLAST of rna-XM_004486091.3 vs. Araport11
Match: | (Symbols: LUL2 | LOG2-LIKE UBIQUITIN LIGASE2 | chr3:19801175-19802274 REVERSE LENGTH=299) HSP 1 Score: 253.062 bits (645), Expect = 4.645e-82 Identity = 135/298 (45.30%), Postives = 183/298 (61.41%), Query Frame = 0
Query: 80 YSNPNCYTNYVNRLQYHPYYPNQQQQQQQWAPPPPSSSTAPPPYVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAADFDDS-DTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKVNNSDR 376
Y NPN QY YP+ Q ++ P +P YV+HQ A IRN++N+ K TLRL+ D Q+P L+SF FDA GSIT+ +FAKE + C + D F +V F KG+ Q+F Q GTGID DL + + DV+ + + AE E DD TP++QIT VLEK + G ++ +VV+QILW++G RY L+E+YGIG++ + +D+ + GKECVIC++EP+DT VLPCRHMCMCS CAK LR Q+N CPICRQ ++ L+EI VNN+DR
Sbjct: 22 YPNPNA--------QYQGNYPSPYQDCARY---PYGEMASPVQYVEHQEAVTIRNDINLKKETLRLEPDEQNPGKFLLSFTFDASVPGSITVMFFAKEGKDCNLIATKEDLFPSTQVSFAKGLEQRFKQACGTGIDFSDMSEADLVEANE-TDVYHVAVKAEVVSE--------DDHPESGTPNRQITHVVLEKDH-KGEYKARVVKQILWVNGNRYVLQEIYGIGNTVDDNGEDANERGKECVICLSEPRDTTVLPCRHMCMCSGCAKLLRFQTNLCPICRQPVDRLLEITVNNNDR 298
BLAST of rna-XM_004486091.3 vs. Araport11
Match: | (Symbols: LUL1 | LOG2-LIKE UBIQUITIN LIGASE1 | chr5:760450-761667 REVERSE LENGTH=337) HSP 1 Score: 233.032 bits (593), Expect = 1.058e-73 Identity = 123/254 (48.43%), Postives = 158/254 (62.20%), Query Frame = 0
Query: 120 PPPYVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKVNN 373
PPP HQ A IRN+VN+ K TL L D ++P+ LVSF FDA G IT+ +FA E+ +C D P+ F +G+GQKF Q SGTGIDL F+ +L K DVFPL + AE TP + + + QITQ V K G+ +I+VV+QILW++ RYEL E+YGI ++ D SD GKECV+C++EP+DT VLPCRHMCMCS CAKALR Q+N CP+CRQ +E L+EI N
Sbjct: 100 PPPTYVHQKAVTIRNDVNLKKKTLTLIPDPENPNRLLVSFTFDASMPGRITVVFFATEDAECNLRATKEDTLPPITFDFGEGLGQKFIQSSGTGIDLTAFKDSELFK-EVDTDVFPLAVKAEA---------TPAEEGKSGSTNVQITQVVYTKEKGE--IKIEVVKQILWVNKRRYELLEIYGIENTV----DGSDEGKECVVCLSEPRDTTVLPCRHMCMCSGCAKALRFQTNLCPVCRQPVEMLLEINKNG 337
BLAST of rna-XM_004486091.3 vs. Araport11
Match: | (Symbols: AtAIRP3, AIRP3, LOG2 | ABA insensitive RING protein 3, LOSS OF GDU 2 | chr3:2996629-2997835 REVERSE LENGTH=341) HSP 1 Score: 209.534 bits (532), Expect = 1.631e-64 Identity = 106/225 (47.11%), Postives = 146/225 (64.89%), Query Frame = 0
Query: 120 PPPYVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAADFDDSDT----GKECVICMTEPKDTAVLPCRHMC 340
P PYV+HQ A IRN+VN+ K +LRL+ D +P LVSF FDA G I++ +FAKE E CK D P+ + F+KG+GQKF Q SG+GID FE +L K + +++PL + AE PS + ++ + + + QITQAV EK G+ +I+VV+QILW++G RYEL+E+YGIG++ D D +D GKECVIC++EP+DT VLPCRHM
Sbjct: 120 PTPYVEHQKAVTIRNDVNLKKESLRLEPDPDNPGRFLVSFTFDATVSGRISVIFFAKESEDCKLTATKEDILPPITLDFEKGLGQKFKQSSGSGIDFSVFEDVELFKAAADTEIYPLAVKAEAA---PSGGENEEEER-SGSKNAQITQAVYEKDKGE--IKIRVVKQILWVNGTRYELQEIYGIGNTVEGDDDSADDANDPGKECVICLSEPRDTTVLPCRHMV 338
BLAST of rna-XM_004486091.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:12562069-12562440 REVERSE LENGTH=123) HSP 1 Score: 50.447 bits (119), Expect = 1.190e-7 Identity = 29/80 (36.25%), Postives = 38/80 (47.50%), Query Frame = 0
Query: 290 WIDGVRYELRELYGIGSSTAADF---DDSDTGKECVICMTEPKDTAVLPCRHMCMCSECA-KALRVQSNKCPICRQSIEE 365
W + E E+ G G A F DD D CVIC E ++ +PC H C CA + L +S CPICR+ I +
Sbjct: 35 WTPPLINESLEVTGKGDVETASFSSSDDVDYSTLCVICFEERRNCFFVPCGHSATCRGCAQRILSEESKVCPICRRVIRK 114
BLAST of rna-XM_004486091.3 vs. Araport11
Match: | (Symbols: SPL1, ZCF61, DAL2 | DIAP1-like protein 2, SP1-like 1 | chr1:21881741-21883632 FORWARD LENGTH=338) HSP 1 Score: 52.7582 bits (125), Expect = 2.039e-7 Identity = 24/65 (36.92%), Postives = 39/65 (60.00%), Query Frame = 0
Query: 305 GSSTAADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEI 369
G T+ D D D CV+C+ + +TA + C HMC C+ C+ LR CP+CR+ I+++++I
Sbjct: 278 GGGTSRDGDTPDL---CVVCLDQKYNTAFVECGHMCCCTPCSLQLR----TCPLCRERIQQVLKI 335
BLAST of rna-XM_004486091.3 vs. Araport11
Match: | (Symbols: XBAT35 | XB3 ortholog 5 in Arabidopsis thaliana | chr3:8321588-8324109 FORWARD LENGTH=438) HSP 1 Score: 51.2174 bits (121), Expect = 8.869e-7 Identity = 18/57 (31.58%), Postives = 35/57 (61.40%), Query Frame = 0
Query: 313 DDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEI 369
+D +TG C IC+ P + +PC H+ C C K ++ ++ CP+CR I++++++
Sbjct: 380 EDGNTGT-CAICLDAPSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQVIKL 435
BLAST of rna-XM_004486091.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q84ME1|LUL3_ARATH (Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana OX=3702 GN=LUL3 PE=1 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 5.228e-113 Identity = 167/272 (61.40%), Postives = 208/272 (76.47%), Query Frame = 0
Query: 109 WAPPPPSSSTAPPPYVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSS----TAADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKVNNSDR 376
+ P P + P PYV+HQTAKK++N+VNV+K T+RL D +P H+LVSFVFDA++DGS TI +F +EE KC VP P+AF P+KVPFQKG GQKF Q GTGIDLGFF LDDLSKPSP E+V+PLVI AET + S ++ P HKQITQAVLEK+N DG+F++KV++QILWI+G RYEL+ELYGI +S TAA + GKECVIC+TEPKDTAV+PCRH+C+CS+CA+ LR Q+NKCPICRQ I EL++IKV +SD
Sbjct: 114 FGPTPVAVMEPPAPYVEHQTAKKVKNDVNVNKATVRLVADDLNPGHYLVSFVFDALFDGSFTIIFFGEEESKCTIVPHLPEAFPPIKVPFQKGAGQKFLQAPGTGIDLGFFSLDDLSKPSP-EEVYPLVISAETVISPSSVSEEP-------LVHKQITQAVLEKTN-DGSFKVKVMKQILWIEGERYELQELYGIDNSITQGTAASGLEDTGGKECVICLTEPKDTAVMPCRHLCLCSDCAEELRFQTNKCPICRQPIHELVKIKVESSDE 376
BLAST of rna-XM_004486091.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8LA32|LUL4_ARATH (Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis thaliana OX=3702 GN=LUL4 PE=2 SV=1) HSP 1 Score: 333.569 bits (854), Expect = 9.629e-112 Identity = 163/255 (63.92%), Postives = 199/255 (78.04%), Query Frame = 0
Query: 123 YVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAAD-FDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKVNNSDR 376
Y++ Q AKK+RN+VNVH+ T+RL++D P HHLVSFVFDA++DGS TI +FAKEE C +PQFP+ + P + FQKG GQKF QPSGTG DL FF LDDLSKP EDV+PLVI AET + +P+ ++ HKQ+TQAVLEK N DG+F++KVV+QILWI+GVRYELRELYG + AA D+S +G ECVICMTE KDTAVLPCRH+CMCS+CAK LR+QSNKCPICRQ IEEL+EIK+N+SD
Sbjct: 112 YLEQQNAKKVRNDVNVHRDTVRLEVDDLVPGHHLVSFVFDALFDGSFTITFFAKEEPNCTIIPQFPEVYSPTRFHFQKGPGQKFLQPSGTGTDLSFFVLDDLSKPLE-EDVYPLVISAETII-------SPNSISEQSSVHKQVTQAVLEKDN-DGSFKVKVVKQILWIEGVRYELRELYGSTTQGAASGLDESGSGTECVICMTEAKDTAVLPCRHLCMCSDCAKELRLQSNKCPICRQPIEELLEIKMNSSDE 357
BLAST of rna-XM_004486091.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9S752|LOFG2_ARATH (Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana OX=3702 GN=LOG2 PE=1 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 2.973e-83 Identity = 129/257 (50.19%), Postives = 174/257 (67.70%), Query Frame = 0
Query: 120 PPPYVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAADFDDSDT----GKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKVN 372
P PYV+HQ A IRN+VN+ K +LRL+ D +P LVSF FDA G I++ +FAKE E CK D P+ + F+KG+GQKF Q SG+GID FE +L K + +++PL + AE PS + ++ + + + QITQAV EK G+ +I+VV+QILW++G RYEL+E+YGIG++ D D +D GKECVIC++EP+DT VLPCRHMCMCS CAK LR Q+N+CPICRQ +E L+EIKV+
Sbjct: 120 PTPYVEHQKAVTIRNDVNLKKESLRLEPDPDNPGRFLVSFTFDATVSGRISVIFFAKESEDCKLTATKEDILPPITLDFEKGLGQKFKQSSGSGIDFSVFEDVELFKAAADTEIYPLAVKAEA---APSGGENEEEER-SGSKNAQITQAVYEKDKGE--IKIRVVKQILWVNGTRYELQEIYGIGNTVEGDDDSADDANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVH 370
BLAST of rna-XM_004486091.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LFH6|LUL2_ARATH (Probable E3 ubiquitin-protein ligase LUL2 OS=Arabidopsis thaliana OX=3702 GN=LUL2 PE=2 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 4.439e-81 Identity = 135/298 (45.30%), Postives = 183/298 (61.41%), Query Frame = 0
Query: 80 YSNPNCYTNYVNRLQYHPYYPNQQQQQQQWAPPPPSSSTAPPPYVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAADFDDS-DTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKVNNSDR 376
Y NPN QY YP+ Q ++ P +P YV+HQ A IRN++N+ K TLRL+ D Q+P L+SF FDA GSIT+ +FAKE + C + D F +V F KG+ Q+F Q GTGID DL + + DV+ + + AE E DD TP++QIT VLEK + G ++ +VV+QILW++G RY L+E+YGIG++ + +D+ + GKECVIC++EP+DT VLPCRHMCMCS CAK LR Q+N CPICRQ ++ L+EI VNN+DR
Sbjct: 22 YPNPNA--------QYQGNYPSPYQDCARY---PYGEMASPVQYVEHQEAVTIRNDINLKKETLRLEPDEQNPGKFLLSFTFDASVPGSITVMFFAKEGKDCNLIATKEDLFPSTQVSFAKGLEQRFKQACGTGIDFSDMSEADLVEANE-TDVYHVAVKAEVVSE--------DDHPESGTPNRQITHVVLEKDH-KGEYKARVVKQILWVNGNRYVLQEIYGIGNTVDDNGEDANERGKECVICLSEPRDTTVLPCRHMCMCSGCAKLLRFQTNLCPICRQPVDRLLEITVNNNDR 298
BLAST of rna-XM_004486091.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LYW5|LUL1_ARATH (Probable E3 ubiquitin-protein ligase LUL1 OS=Arabidopsis thaliana OX=3702 GN=LUL1 PE=1 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.013e-72 Identity = 123/254 (48.43%), Postives = 158/254 (62.20%), Query Frame = 0
Query: 120 PPPYVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKVNN 373
PPP HQ A IRN+VN+ K TL L D ++P+ LVSF FDA G IT+ +FA E+ +C D P+ F +G+GQKF Q SGTGIDL F+ +L K DVFPL + AE TP + + + QITQ V K G+ +I+VV+QILW++ RYEL E+YGI ++ D SD GKECV+C++EP+DT VLPCRHMCMCS CAKALR Q+N CP+CRQ +E L+EI N
Sbjct: 100 PPPTYVHQKAVTIRNDVNLKKKTLTLIPDPENPNRLLVSFTFDASMPGRITVVFFATEDAECNLRATKEDTLPPITFDFGEGLGQKFIQSSGTGIDLTAFKDSELFK-EVDTDVFPLAVKAEA---------TPAEEGKSGSTNVQITQVVYTKEKGE--IKIEVVKQILWVNKRRYELLEIYGIENTV----DGSDEGKECVVCLSEPRDTTVLPCRHMCMCSGCAKALRFQTNLCPVCRQPVEMLLEINKNG 337
BLAST of rna-XM_004486091.3 vs. UniProtKB/Swiss-Prot
Match: sp|O60291|MGRN1_HUMAN (E3 ubiquitin-protein ligase MGRN1 OS=Homo sapiens OX=9606 GN=MGRN1 PE=1 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 7.059e-34 Identity = 93/272 (34.19%), Postives = 142/272 (52.21%), Query Frame = 0
Query: 122 PYVD---HQTAKKIRNNVNVHKHTLRL-----DLDHQHPDH------HLVSFVFDAVYDGSITIFYFAKEE---EKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTA-----ADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKV 371
PYV H+ K +R+ VN+ K +LRL D D D + + F FDA +ITI+ A EE + + P+ P + + V +++GV Q+FS PS ID ++ D+L+ VFP+VI A E T H + A EK + DG+F +K ++Q +D V Y L+E+YGI + +D ++SD ECV+C+++ +DT +LPCRH+C+C+ CA LR Q+N CPICR L++I+
Sbjct: 71 PYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSLEFTFDADARVAITIYCQASEEFLNGRAVYSPKSP-SLQSETVHYKRGVSQQFSLPS-FKIDFSEWKDDELNF-DLDRGVFPVVIQAVVDEGDVVE----------VTGHAHVLLAAFEK-HMDGSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQIRA 328
BLAST of rna-XM_004486091.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q96PX1|RN157_HUMAN (E3 ubiquitin ligase RNF157 OS=Homo sapiens OX=9606 GN=RNF157 PE=1 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 6.800e-33 Identity = 93/281 (33.10%), Postives = 140/281 (49.82%), Query Frame = 0
Query: 118 TAPPPYVDHQTAKKIRNNVNVHKHTLRL-----------DLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFP--DAFEPVKVPFQKGVGQKFSQPSGTGID--------LGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGS------STAADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKV 371
APPP + K +R+ VN+ K TLRL + + H+ V F FD +ITI+Y A EE + P ++ + V +++GV Q+F PS T +D LGF DL + +V+PLV+ A D + H + EK + DG F +K ++Q +DGV Y L+E+YGI + S A+ + SD ECV+C+++ +DT +LPCRH+C+C+ CA LR Q+N CPICR L++I+
Sbjct: 73 AAPPP---QEPVKTLRSLVNIRKDTLRLVKCAEEVKSPGEEASKAKVHYNVEFTFDTDARVAITIYYQATEEFQNGIASYIPKDNSLQSETVQYKRGVCQQFCLPSHT-VDPSEWAEEELGF----DLDR-----EVYPLVVHAVV------------DEGDEYFGHCHVLLGTFEK-HTDGTFCVKPLKQKQVVDGVSYLLQEIYGIENKYNTQDSKVAEDEVSDNSAECVVCLSDVRDTLILPCRHLCLCNTCADTLRYQANNCPICRLPFRALLQIRA 327
BLAST of rna-XM_004486091.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q3TEL6|RN157_MOUSE (E3 ubiquitin ligase Rnf157 OS=Mus musculus OX=10090 GN=Rnf157 PE=1 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 1.165e-32 Identity = 93/281 (33.10%), Postives = 140/281 (49.82%), Query Frame = 0
Query: 118 TAPPPYVDHQTAKKIRNNVNVHKHTLRL-----------DLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFP--DAFEPVKVPFQKGVGQKFSQPSGTGID--------LGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGS------STAADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKV 371
APPP + K +R+ +N+ K TLRL + + H+ V F FD +ITI+Y A EE + P ++ + V +++GV Q+F PS T +D LGF DL + +V+PLV+ A D + H + EK + DG F +K ++Q +DGV Y L+E+YGI + S A+ D SD ECV+C+++ +DT +LPCRH+C+C+ CA LR Q+N CPICR L++I+
Sbjct: 73 AAPPP---QEPVKTLRSLINIRKDTLRLVKCAEEVKSHGEEAGKAKVHYNVEFTFDTDARVAITIYYQATEEFQNGIASYIPKDNSLQSETVHYKRGVFQQFCLPSHT-VDPSEWAEEELGF----DLDR-----EVYPLVVHAVV------------DEGDEYFGHCHVLLGTFEK-HPDGTFCVKPLKQKQVVDGVSYLLQEIYGIENKYNTQDSKVAEDDVSDNSAECVVCLSDVRDTLILPCRHLCLCNTCADTLRYQANNCPICRLPFRALLQIRA 327
BLAST of rna-XM_004486091.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q6INH1|RN157_XENLA (E3 ubiquitin ligase Rnf157 OS=Xenopus laevis OX=8355 GN=rnf157 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.233e-32 Identity = 90/273 (32.97%), Postives = 143/273 (52.38%), Query Frame = 0
Query: 118 TAPPPYVDHQTAKKIRNNVNVHKHTLRL----------DLDHQHPD-HHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDA--FEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGS------STAADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKV 371
TAP P + K +R+ +N+ K TLRL ++ P H+ V F FD +IT++Y A EE + P + + V F++GV Q+F PS T +D + ++L+ E V+P+V+ A +E E+ H + A EK + DG+F +K ++Q +DGV Y L+E+YGI + S A+ + SD ECV+C+++ +DT +LPCRH+C+C+ CA LR Q++ CPICR L++I+
Sbjct: 73 TAPSP---QEPVKTLRSLINIRKDTLRLVRCTEELKTTGVEGSRPKVHYNVEFTFDTDARVAITMYYQATEEFQGGIPSYLPKSSNLQSDTVHFKRGVSQQFCFPSHT-VDPSEWREEELTFDLDRE-VYPMVVHA--VVEEGEEH----------LGHSHVLMATFEK-HADGSFCVKPLKQKQVVDGVSYLLQEIYGIENKYNSQDSKVAEDELSDNSAECVVCLSDVRDTLILPCRHLCLCNACADTLRYQASNCPICRLPFRALLQIRA 327
BLAST of rna-XM_004486091.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q5XIQ4|MGRN1_RAT (E3 ubiquitin-protein ligase MGRN1 OS=Rattus norvegicus OX=10116 GN=Mgrn1 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.279e-31 Identity = 91/279 (32.62%), Postives = 140/279 (50.18%), Query Frame = 0
Query: 122 PYVD---HQTAKKIRNNVNVHKHTLRL-----DLDHQHPDH------HLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPD----------AFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTA-----ADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKV 371
PYV H+ K +R+ VN+ K +LRL D D D + + F FDA +ITI+ C+ V +F + + + V +++GV Q+FS PS ID ++ D+L+ VFP+VI A E T H + A EK + DG+F +K ++Q +D V Y L+E+YGI + +D ++SD ECV+C+++ +DT +LPCRH+C+C+ CA LR Q+N CPICR L++I+
Sbjct: 72 PYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDTDSPTEDGEKPRVLYSLEFTFDADARVAITIY--------CQAVEEFVNGMTVYSCKNPSLQSETVHYKRGVSQQFSLPS-FKIDFSEWKDDELNF-DLDRGVFPVVIQAVVDEGDVVE----------VTGHAHVLLAAFEK-HVDGSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQIRA 329
BLAST of rna-XM_004486091.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XA93|A0A1S2XA93_CICAR (RING-type E3 ubiquitin transferase OS=Cicer arietinum OX=3827 GN=LOC101497882 PE=3 SV=1) HSP 1 Score: 778.474 bits (2009), Expect = 0.000e+0 Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 0
Query: 1 MGISWSSSRRRNNFIHNPPPPPQLPPPPPYYYSTESHPPLPPQQNYYLPSTTTPYTTAYVTTPPPPPPPPQSQTHHPFYYSNPNCYTNYVNRLQYHPYYPNQQQQQQQWAPPPPSSSTAPPPYVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKVNNSDR 376
MGISWSSSRRRNNFIHNPPPPPQLPPPPPYYYSTESHPPLPPQQNYYLPSTTTPYTTAYVTTPPPPPPPPQSQTHHPFYYSNPNCYTNYVNRLQYHPYYPNQQQQQQQWAPPPPSSSTAPPPYVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKVNNSDR
Sbjct: 1 MGISWSSSRRRNNFIHNPPPPPQLPPPPPYYYSTESHPPLPPQQNYYLPSTTTPYTTAYVTTPPPPPPPPQSQTHHPFYYSNPNCYTNYVNRLQYHPYYPNQQQQQQQWAPPPPSSSTAPPPYVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKVNNSDR 376
BLAST of rna-XM_004486091.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D5BPL1|A0A9D5BPL1_PEA (RING-type E3 ubiquitin transferase OS=Pisum sativum OX=3888 GN=KIW84_014956 PE=3 SV=1) HSP 1 Score: 523.472 bits (1347), Expect = 0.000e+0 Identity = 293/389 (75.32%), Postives = 318/389 (81.75%), Query Frame = 0
Query: 1 MGISWSSSRRRNNFIHNPPPPPQLPPPPP----YYYSTESHPPLPP---QQNYYLPSTTTPYTTAYVTTPPPPPPPPQSQTHHPFYYSNPNCYTNYVN-RLQYHP-YYPNQQQQQQQWAPPPPSSSTAPPP--YVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSEN---KTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKVNNSD 375
MGISWSSSRRRNNFIHNPP P PPPP YYYSTESHPP PP QQ YY PSTTT Y T + PPP P QTH FY+SNPN NY N R+ +HP YY NQ W PPPP ++ P YVDHQTAKKIRN+VNVHK TLRL++D +PDHHLVSFVFDAVYDGSIT+ YFAKEE+KC+FVP FPDAF PVKVPF+KGVGQKF+QPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSEN KTPDDS L+++PH QITQAVLEK N GAFQIKV++QILWIDGVRYELRELYGIG+S A+ FDDSD GKECVICMTEPKDTAVLPCRHMCMCS+CAKALR+QSNKCPICRQ IEELMEIKV + D
Sbjct: 1 MGISWSSSRRRNNFIHNPPQQPPSLPPPPPPPHYYYSTESHPPPPPPPHQQGYYYPSTTTGYATTHPPPPPPSLQP---QTH-SFYFSNPNSNVNYANPRVMFHPSYYVNQHA----WGPPPPPLPSSSAPPPYVDHQTAKKIRNHVNVHKDTLRLEVDEHNPDHHLVSFVFDAVYDGSITVSYFAKEEDKCRFVPLFPDAFVPVKVPFEKGVGQKFAQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENETPKTPDDSVLNSSPHMQITQAVLEKRN--GAFQIKVIKQILWIDGVRYELRELYGIGNSEASGFDDSDPGKECVICMTEPKDTAVLPCRHMCMCSDCAKALRLQSNKCPICRQPIEELMEIKVKSGD 379
BLAST of rna-XM_004486091.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6N1M5|A0A2Z6N1M5_TRISU (RING-type E3 ubiquitin transferase OS=Trifolium subterraneum OX=3900 GN=TSUD_381160 PE=3 SV=1) HSP 1 Score: 516.924 bits (1330), Expect = 0.000e+0 Identity = 292/391 (74.68%), Postives = 308/391 (78.77%), Query Frame = 0
Query: 1 MGISWSSSRRRNNFIHNPPPPPQLPPPPPYYY-----STESHPPLPPQQNYYLPSTTTPYTTAYVTTPPPPPPPPQSQTHHPFYYSNPNCYTNY----VNRLQYHP-YYPNQQQQQQQ-WAPPPPS----SSTAPPPYVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSEN---KTPDDSKLDA---TPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIK 370
MGISWSSS RRNN+I NPPP P PPP Y S PPLPPQQ Y P Y T HPFY+SNPN YTNY +NR+Q+HP YY NQQQ QQ W PP S SST PPPYVDHQTAKKIRNNVNVHK TLRL+LD +PDHHLVSFVFDAVYDGSITIFYFAKEE+KCKFVP FPDAF PVKVPF+KGVG+KF+QPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPS N KTPDDS L+A +PH QITQAVL KSNGD AFQIKVV+QILWIDGVRYELRELYGIGSS AA FDDSD GKECVICMTEPKDTAVLPCRHMC+CSECAKALR+QSNKCPICRQ IEELMEIK
Sbjct: 1 MGISWSSSSRRNNYIQNPPPQPPPQLPPPPPYYYPTDSHPHPPPLPPQQGYNYPPQNIGYATQPPPQ----------PQTHPFYFSNPNAYTNYPNSSINRIQFHPSYYVNQQQHQQHAWGPPHQSFHAPSSTTPPPYVDHQTAKKIRNNVNVHKDTLRLELDQHNPDHHLVSFVFDAVYDGSITIFYFAKEEDKCKFVPLFPDAFVPVKVPFEKGVGKKFAQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSANETPKTPDDSMLEASPDSPHMQITQAVLVKSNGDSAFQIKVVKQILWIDGVRYELRELYGIGSSEAAGFDDSDPGKECVICMTEPKDTAVLPCRHMCLCSECAKALRLQSNKCPICRQPIEELMEIK 381
BLAST of rna-XM_004486091.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8LIP5|A0A8B8LIP5_ABRPR (RING-type E3 ubiquitin transferase OS=Abrus precatorius OX=3816 GN=LOC113865060 PE=3 SV=1) HSP 1 Score: 510.375 bits (1313), Expect = 1.900e-178 Identity = 286/386 (74.09%), Postives = 310/386 (80.31%), Query Frame = 0
Query: 1 MGISWSSSRRRNNFIHNPPPPPQLPPPPPYYYSTESHPPLPPQQNYYLPSTTTPYT---TAYVTTPPPPPPPPQSQTH---HPFYYSNPNCYTNY----VNRLQYHPYYPNQQQQQQQWAPPPPSSSTAPPPYVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKVNNSDR 376
MGISWSS RRRNNFI NPPPPP PP + PP PP Y +TTPYT T YV+ P PPPPP H FYYSNPN YTNY VNRL YHP+Y NQ W PS+ST PPPYVDHQTAKKIRN VNVHK TLRL+LD +PDHHL+SFVFDA+YDGSITIFYFAKEEEKC+FVP FPDAFEP+++PFQKGVGQKF+QP+GTGIDLGFFELDDLSKPSPGEDVFPLVICAETC PS ++TP DS DA+PH QITQ VLEKSN G FQIKVVRQILWIDGVRYELRELYGIGSS A DFDD+D GKECVICMTEPKDTAVLPCRHMCMCSECAKALR+QSNKCPICRQSIEEL+EIKVNN+++
Sbjct: 1 MGISWSS-RRRNNFIQNPPPPPSYYYPP----QSHPPPPPPPPPQGYYFPSTTPYTPHCTNYVSPPALPPPPPPPPPQPQTHSFYYSNPNDYTNYANSTVNRLHYHPFYVNQPHPSG-WPAIRPSAST-PPPYVDHQTAKKIRNYVNVHKDTLRLELDDHNPDHHLLSFVFDAIYDGSITIFYFAKEEEKCRFVPLFPDAFEPIRIPFQKGVGQKFAQPAGTGIDLGFFELDDLSKPSPGEDVFPLVICAETC---PSADETPGDSLQDASPHMQITQGVLEKSNSGGPFQIKVVRQILWIDGVRYELRELYGIGSSAATDFDDNDPGKECVICMTEPKDTAVLPCRHMCMCSECAKALRLQSNKCPICRQSIEELIEIKVNNANQ 376
BLAST of rna-XM_004486091.3 vs. UniProtKB/TrEMBL
Match: tr|V7BT56|V7BT56_PHAVU (RING-type E3 ubiquitin transferase OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G153500g PE=3 SV=1) HSP 1 Score: 498.434 bits (1282), Expect = 1.142e-173 Identity = 269/384 (70.05%), Postives = 300/384 (78.12%), Query Frame = 0
Query: 1 MGISWSSSRRRNNFIHNPPPPPQLPPPPPYYYSTESHPPLPPQQNYYLPSTTT--PYTTAYVTTPPPPPPPPQSQTHHP--FYYSNPNCYTNYVN----RLQYHPYYPNQQQQQQQWAPPPPSSSTAPPPYVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKVNNSDR 376
MGISWS RRRNN+I NPPPP PP + P PP Q Y+LPSTTT P + Y PP PPP H FYY+N + Y NY N RLQY P+Y Q W + ++ PPPYVDHQ AKKIRN VNVHK TLRL++D ++PDHHL+SFVFDAVYDGSIT+FYFAKEEEKC+FVP FPDAF+PV++PFQKGVGQ FSQPSGTGIDLGFFELDDLSKPSP EDVFPLVICAET L+TPSE++T DS LDA+PH QITQ VLEKSNG G F IKVVRQILWIDGVRYELRELYGI SS+AADFDD+D GKECVICMTE KDTAVLPCRHMCMC ECAK+LR+QSNKCPICRQSIEEL+EIKVNN ++
Sbjct: 1 MGISWSG-RRRNNYIQNPPPPLPPPPYYYPP-QSHHPPLPPPPQGYFLPSTTTYAPNSNNYAAPPPLVPPPQPPPQTHSISFYYTNQSAYPNYANSAPNRLQYQPFY---HPQPSVWPAATGAPASTPPPYVDHQAAKKIRNYVNVHKDTLRLEVDQENPDHHLISFVFDAVYDGSITVFYFAKEEEKCRFVPLFPDAFQPVRIPFQKGVGQTFSQPSGTGIDLGFFELDDLSKPSPEEDVFPLVICAETSLKTPSEDETLGDSVLDASPHMQITQGVLEKSNGAGPFLIKVVRQILWIDGVRYELRELYGIASSSAADFDDNDPGKECVICMTEAKDTAVLPCRHMCMCGECAKSLRLQSNKCPICRQSIEELIEIKVNNDNQ 379
BLAST of rna-XM_004486091.3 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6KIA4|A0A4D6KIA4_VIGUN (RING-type E3 ubiquitin transferase OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g720 PE=3 SV=1) HSP 1 Score: 503.442 bits (1295), Expect = 1.054e-172 Identity = 269/379 (70.98%), Postives = 298/379 (78.63%), Query Frame = 0
Query: 1 MGISWSSSRRRNNFIHNPPPPPQLPPPPPYYYSTESHPPLPPQQNYYLPSTTT--PYTTAYVTTPPPPPPPPQS--QTHH-PFYYSNPNCYTNYVN----RLQYHPYYPNQQQQQQQWAPPPPSSSTAPPPYVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIK 370
MGISWS RRRNN+I NPPPP PP + S PP PP Q Y+LPS TT P+ Y PP PP QTH FYY N Y NY N L Y P+Y Q W SS++ PPPYVDHQ AKKIRN VNVHK TLRL++D ++PDHHL+SFVFDAVYDGSIT+FYFAKEEEKC+FVP FPDAF+PV++PFQKGVGQ FSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAET L+TPSE++TP +S LDA+PH QITQ VLEKSNG G F IKVV+QILWIDGVRYELRELYGI SS+AADF+D+D GKECVIC+TEPKDTAVLPCRHMCMCSECAKALR+QSNKCPICRQSIEEL+EIK
Sbjct: 1 MGISWSG-RRRNNYIQNPPPPLPPPPYYYHPQSNHPPPP-PPPQGYFLPSATTYAPHCNNYAAPPPLAPPSQPPPPQTHSISFYYPNQGAYPNYANTVPNHLHYQPFY---HSQPSAWPGATRSSASTPPPYVDHQAAKKIRNYVNVHKDTLRLEVDQENPDHHLISFVFDAVYDGSITVFYFAKEEEKCRFVPLFPDAFQPVRIPFQKGVGQTFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETSLKTPSEDETPGESVLDASPHMQITQGVLEKSNGAGPFLIKVVKQILWIDGVRYELRELYGIASSSAADFEDNDPGKECVICLTEPKDTAVLPCRHMCMCSECAKALRIQSNKCPICRQSIEELIEIK 374
BLAST of rna-XM_004486091.3 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6KNA6|A0A4D6KNA6_VIGUN (RING-type E3 ubiquitin transferase OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g719 PE=3 SV=1) HSP 1 Score: 494.197 bits (1271), Expect = 4.234e-172 Identity = 270/386 (69.95%), Postives = 301/386 (77.98%), Query Frame = 0
Query: 1 MGISWSSSRRRNNFIHNPPPPPQLPPPPPYYYSTESHPPLPPQQNYYLPSTTT--PYTTAYVTTPPPPPPPPQSQ---THH-PFYYSNPNCYTNYVN----RLQYHPYYPNQQQQQQQWAPPPPSSSTAPPPYVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKVNNSDR 376
MGISWS RRRNNFI N PPP PP +HPP PP Q Y+LPSTT+ P+ Y PP PPPP TH FYY N N Y NY N RL Y P+Y Q +S++ PPPYVDHQ AKKIRN VNVHK TLRL++D ++PDHHL+SFVFDAVYDGSIT+ YFAKEEEKC+FVP FPDAF+PV +PFQKGVGQ F+QPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAET L+T SE++TP DS LDA+PH QITQ VLEKSNG G FQIKVVRQILWIDGVRYELRELYGI SS+AADFDD+D GKECV+CMTEPKDTAVLPCRHMC+C +CAKALR+Q NKCPICRQSIEEL+EIKVNN ++
Sbjct: 1 MGISWSG-RRRNNFIQNTPPPLPPPPYYYP--PQSNHPPPPPPQGYFLPSTTSYSPHNNNYAAAPPLPPPPQPPPPPQTHSISFYYPNQNAYPNYANSAPNRLHYQPFY---HPQPSMLPAATRASASTPPPYVDHQAAKKIRNYVNVHKDTLRLEVDQENPDHHLISFVFDAVYDGSITVSYFAKEEEKCRFVPLFPDAFQPVTIPFQKGVGQTFNQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETSLKTSSEDETPGDSVLDASPHMQITQGVLEKSNGAGPFQIKVVRQILWIDGVRYELRELYGIASSSAADFDDNDPGKECVVCMTEPKDTAVLPCRHMCLCGDCAKALRLQYNKCPICRQSIEELIEIKVNNDNQ 380
BLAST of rna-XM_004486091.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3S3N8|A0A0S3S3N8_PHAAN (RING-type E3 ubiquitin transferase OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G078500 PE=3 SV=1) HSP 1 Score: 493.812 bits (1270), Expect = 4.945e-172 Identity = 267/377 (70.82%), Postives = 296/377 (78.51%), Query Frame = 0
Query: 1 MGISWSSSRRRNNFIHNPPPPPQLPPPPPYYYSTESHPPLPPQQNYYLPSTTT--PYTTAYVTTPPPPPPPPQSQTHHPFYYSNPNCYTNYVNRLQYHPYYPNQQQ-QQQQWAPPPPSSSTAPPPYVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKVNNS 374
MGISWS RRRNN+I NPPPP PP + S PP P Q Y+LPSTTT P+ Y PP P P YY N + Y NY N + H +Y Q W SS++ PPPYVDHQ AKKIRN VNVHK TLRL++D ++PDHHL+SFVFDAVYDGSITIFYFAKEEE+C+FVP FPDAF+PV +PFQKGVGQ FSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAET L+TPSE++TP DS LDA+PH QITQ VLEKSNG G F I VVRQILWIDGVRYELRELYGI SS+AADF+D+D GKECVIC+TEPKDTAVLPCRHMCMCSECAKALR+QSNKCPICRQSIEEL+EIKVNN+
Sbjct: 1 MGISWSG-RRRNNYIQNPPPPFPPPPYYYHPQSNHP-PPPQPPQGYFLPSTTTYAPHCNNYAAPPPFTPLPQPPPP----YYHNQSVYPNYANSVPSHLHYQLFYHPQICAWPGATRSSASTPPPYVDHQAAKKIRNYVNVHKDTLRLEVDQENPDHHLISFVFDAVYDGSITIFYFAKEEERCRFVPLFPDAFQPVSIPFQKGVGQTFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETSLKTPSEDQTPGDSVLDASPHMQITQGVLEKSNGAGPFLINVVRQILWIDGVRYELRELYGIASSSAADFEDNDPGKECVICLTEPKDTAVLPCRHMCMCSECAKALRIQSNKCPICRQSIEELIEIKVNNT 371
BLAST of rna-XM_004486091.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0K7S3|A0A8T0K7S3_PHAAN (RING-type E3 ubiquitin transferase OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0068740 PE=3 SV=1) HSP 1 Score: 493.812 bits (1270), Expect = 4.945e-172 Identity = 267/377 (70.82%), Postives = 296/377 (78.51%), Query Frame = 0
Query: 1 MGISWSSSRRRNNFIHNPPPPPQLPPPPPYYYSTESHPPLPPQQNYYLPSTTT--PYTTAYVTTPPPPPPPPQSQTHHPFYYSNPNCYTNYVNRLQYHPYYPNQQQ-QQQQWAPPPPSSSTAPPPYVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKVNNS 374
MGISWS RRRNN+I NPPPP PP + S PP P Q Y+LPSTTT P+ Y PP P P YY N + Y NY N + H +Y Q W SS++ PPPYVDHQ AKKIRN VNVHK TLRL++D ++PDHHL+SFVFDAVYDGSITIFYFAKEEE+C+FVP FPDAF+PV +PFQKGVGQ FSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAET L+TPSE++TP DS LDA+PH QITQ VLEKSNG G F I VVRQILWIDGVRYELRELYGI SS+AADF+D+D GKECVIC+TEPKDTAVLPCRHMCMCSECAKALR+QSNKCPICRQSIEEL+EIKVNN+
Sbjct: 1 MGISWSG-RRRNNYIQNPPPPFPPPPYYYHPQSNHP-PPPQPPQGYFLPSTTTYAPHCNNYAAPPPFTPLPQPPPP----YYHNQSVYPNYANSVPSHLHYQLFYHPQICAWPGATRSSASTPPPYVDHQAAKKIRNYVNVHKDTLRLEVDQENPDHHLISFVFDAVYDGSITIFYFAKEEERCRFVPLFPDAFQPVSIPFQKGVGQTFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETSLKTPSEDQTPGDSVLDASPHMQITQGVLEKSNGAGPFLINVVRQILWIDGVRYELRELYGIASSSAADFEDNDPGKECVICLTEPKDTAVLPCRHMCMCSECAKALRIQSNKCPICRQSIEELIEIKVNNT 371
BLAST of rna-XM_004486091.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445I841|A0A445I841_GLYSO (RING-type E3 ubiquitin transferase OS=Glycine soja OX=3848 GN=D0Y65_031323 PE=3 SV=1) HSP 1 Score: 493.041 bits (1268), Expect = 1.012e-171 Identity = 275/382 (71.99%), Postives = 302/382 (79.06%), Query Frame = 0
Query: 1 MGISWSSSRRRNNFIHNPPPPPQLPPPPPYYYSTESHPPLPPQ-QNYYLPSTTTPYTTAYVTTPPPPPPPPQSQTHH-PFYYS-NPNCYTN--YVNRLQY--HPYYPNQQQQQQQWAPPPPSSSTAPPPYVDHQTAKKIRNNVNVHKHTLRLDLDHQHPDHHLVSFVFDAVYDGSITIFYFAKEEEKCKFVPQFPDAFEPVKVPFQKGVGQKFSQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENKTPDDSKLDATPHKQITQAVLEKSNGDGAFQIKVVRQILWIDGVRYELRELYGIGSSTAADFDDSDTGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNKCPICRQSIEELMEIKVNNSD 375
MGISWS RRRNN++ N PPPP P YYY TESHP PPQ Q Y+LPS T PY PPP QTH FYYS NPN Y R Y H Y+P Q Q W P P++ T PP YVDHQTAKKIRN VNVHK TLRL++D +PD HL+SFVFDAVYDGSITI YFAKEEEKC+FVP +P+AF+PV++PFQKGVGQKF+QPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAET L+T SE++TP DS LDA+PH QITQ VLEKSNG G F IKVV+QILWIDGVRYELRELYGIG+S+AADFDD+D GKECVICMTEPKDTAVLPCRHMCMCSECA A R+QSNKCPICRQSIEEL+EIKVNN D
Sbjct: 1 MGISWSG-RRRNNYLQNRPPPPP----PSYYYHTESHPAPPPQPQGYFLPSAT-PYAPPPPMPPPP-----PPQTHSISFYYSSNPNSYGTPTLAPRFHYQQHYYHPQPQPQLAAWPVPRPAAPTPPP-YVDHQTAKKIRNYVNVHKDTLRLEVDDHNPDLHLLSFVFDAVYDGSITILYFAKEEEKCRFVPLYPEAFQPVRIPFQKGVGQKFAQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETSLKTTSEDETPGDSLLDASPHMQITQGVLEKSNGAGPFLIKVVKQILWIDGVRYELRELYGIGNSSAADFDDNDPGKECVICMTEPKDTAVLPCRHMCMCSECANAHRLQSNKCPICRQSIEELIEIKVNNGD 370 The following BLAST results are available for this feature:
BLAST of rna-XM_004486091.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11) Total hits: 9
BLAST of rna-XM_004486091.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot) Total hits: 10
BLAST of rna-XM_004486091.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_004486091.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004486091.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004486091.3; organism=Cicer arietinum; type=mRNA; length=1131bpback to top protein sequence of rna-XM_004486091.3_CaCDCfrontier-NCBI_v1 >rna-XM_004486091.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004486091.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004486091.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=376bpback to top mRNA from alignment at chr1:5303972..5309138- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_004486091.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004486091.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004486091.3; organism=Cicer arietinum; type=mRNA; length=5167bp; location=Sequence derived from: chr1:5303972..5309138- (Cicer arietinumback to top Coding sequence (CDS) from alignment at chr1:5303972..5309138- >rna-XM_004486091.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004486091.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004486091.3; organism=Cicer arietinum; type=CDS; length=1131bp; location=Sequence derived from: chr1:5303972..5309138- (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|