rna-XM_004489772.3
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Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_004489772.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:22314426-22316867 REVERSE LENGTH=540) HSP 1 Score: 687.182 bits (1772), Expect = 0.000e+0 Identity = 351/541 (64.88%), Postives = 422/541 (78.00%), Query Frame = 0
Query: 4 LSLKGFTYMLLIAFLIWSSNFKCCIARRGKHWRQSISFSSSLYK----KKGKSYSYGNDHKKNHHNGGSNSKPKSPPTHKSVPQLPNSPPPYKSIPISPPISKPKYSPSTPPPKAYSII-----FNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQ-DFPYDNPIDDEEKLIVPLNHT--QTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPPIGCLQIGKPSNNRIQTDHDIC 532
L+L+ T M L+ L+WS+ + CIARRG+HWR SSSL KK KS H+ NHH+ SKPK P K+ P N P S P P + P P + FNVLD+GAKGDG +DDT+AFEA WA+ CKVEASTM++P DY+F VGPISFSGPYC+ NIVFQL+G I+APT+ +W G ++ WIEFTKL GITIQGNGVIDGRG++WWQ D+ D PIDD+ KLIVPLN++ + PP+P+++E+ +MPS KPTALRFYGS TVTGITIQNSPQCHLKFDNC VLVHDV++SSPGDSPNTDGIHLQN++DV+IH++ LACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKD+T+ACVSNITVRDV +HN+M GVRIKTWQGG GSV+G+LFSN+Q++EVQLPIVIDQFYCD C NHTSAV++ G+ YE+I+GTYTVKPVHFACSDS PC+DV L+ +ELKP+Q +YH+ DPFCW+TFGEL + TVPPI CLQIGKP+ N + +DHDIC
Sbjct: 7 LTLRSITMMTLVTILVWSATLETCIARRGRHWRHHHRSSSSLSDSLSSKKPKS------HENNHHHMSHKSKPK--PKMKTQPPKSNDGSPVVSQPPQVQQPPPPHVQPPPTPLPLQPVEDSQQFNVLDFGAKGDGMSDDTQAFEAAWASACKVEASTMIIPPDYIFLVGPISFSGPYCQANIVFQLEGMIVAPTDTESWGGGLMWWIEFTKLSGITIQGNGVIDGRGTVWWQQDYLSDYPIDDDFKLIVPLNNSVQERPPMPIRSELNWRMPSIKPTALRFYGSIDVTVTGITIQNSPQCHLKFDNCVKVLVHDVNVSSPGDSPNTDGIHLQNTRDVMIHTTTLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDSTKACVSNITVRDVVMHNTMTGVRIKTWQGGIGSVKGILFSNIQLTEVQLPIVIDQFYCDHSKCMNHTSAVSVEGVTYEKIRGTYTVKPVHFACSDSFPCIDVQLSGIELKPVQLQYHMYDPFCWKTFGELNSATVPPIDCLQIGKPARNGVHSDHDIC 539
BLAST of rna-XM_004489772.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:3515478-3517807 REVERSE LENGTH=532) HSP 1 Score: 649.047 bits (1673), Expect = 0.000e+0 Identity = 299/420 (71.19%), Postives = 359/420 (85.48%), Query Frame = 0
Query: 116 SIIFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQ-DFPYDNPIDDEEKLIVPLNHT--QTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPPIGCLQIGKPSNNRIQTDHDIC 532
S +FNV+D+GAKGDG DDTKAFEA W A CK+EAS M+VP +Y + VGPISFSGPYC+ NIVFQLDGTIIAPT+ W ++ WI+FTKL GI +QG GVIDGRGS WWQ D P+ ID + KLIVPLN++ Q PP+P+++E+ +MPS KPTALRF GS+G VTGITIQNSPQCHLKFD+C GV+VHD+++SSPGDSPNTDGIHLQN+KDVLIHS+ LACGDDCISIQTGCSNV+VHNVNCGPGHGISIGSLGK+ T+ACVSNITVRDV +HN+M GVRIKTWQGG GSV+G++FSN+Q+++VQ+PI I+QFYCD C N TSAVA+ G+ YERIKGTYTVKPVHFACSD+ PCVDV L+++ELKP+QEKY + D +CWQTFGEL TPT+PPI CL+IGKP N++Q+DHD+C
Sbjct: 116 SQVFNVMDFGAKGDGKCDDTKAFEAAWVAACKIEASVMLVPPEYTYLVGPISFSGPYCQANIVFQLDGTIIAPTDSKTWGKGLMWWIDFTKLKGIKVQGKGVIDGRGSGWWQQDSPF---IDSDTKLIVPLNNSANQNPPMPIRSELDERMPSIKPTALRFSGSFGVEVTGITIQNSPQCHLKFDDCVGVVVHDIAVSSPGDSPNTDGIHLQNTKDVLIHSTTLACGDDCISIQTGCSNVFVHNVNCGPGHGISIGSLGKEGTKACVSNITVRDVAMHNTMTGVRIKTWQGGVGSVKGIIFSNIQLNQVQIPITINQFYCDHSKCKNQTSAVAVEGVTYERIKGTYTVKPVHFACSDNFPCVDVQLSSIELKPVQEKYRMYDAYCWQTFGELNTPTLPPIDCLKIGKPPRNKVQSDHDVC 532
BLAST of rna-XM_004489772.3 vs. Araport11
Match: | (Symbols: PGLR | | chr5:4724509-4726328 FORWARD LENGTH=435) HSP 1 Score: 526.939 bits (1356), Expect = 0.000e+0 Identity = 255/414 (61.59%), Postives = 301/414 (72.71%), Query Frame = 0
Query: 119 FNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPPIGCLQIGKPSNNRIQTDHDIC 532
NVLD+GAKGDG +DDTKAFE W CKV AST++VP+ F VGP+SF G CK IVFQL+G IIAPT+ +AW +LQWIEF L GITI+G G+IDGRGS+WW D MG KMP KPTALRFYGS G TV+GITIQNSPQ HLKFDNC + V D + SSPGDSPNTDGIHLQNS+D +I+ S LACGDDCISIQTGCSN+ +H+V+CGPGHGISIG LGKDNT+ACVSNITVRDV +H + NGVRIK+WQGGSGSV+ V+FSN+QVS V PI+IDQ+YCD C N TSAVA++ INY IKGTYT +PV FACSDSLPC +SL+T+ELKP K DPFCW+ GEL+T T+PPI CL+ K ++++D C
Sbjct: 51 INVLDHGAKGDGTSDDTKAFEDAWQVACKVAASTLLVPSGSTFLVGPVSFLGKECKEKIVFQLEGKIIAPTSASAWGSGLLQWIEFKALQGITIKGKGIIDGRGSVWWNDM-----------------------------MGTKMPRTKPTALRFYGSNGVTVSGITIQNSPQTHLKFDNCISIQVSDFTTSSPGDSPNTDGIHLQNSQDAVIYRSTLACGDDCISIQTGCSNINIHDVDCGPGHGISIGGLGKDNTKACVSNITVRDVTMHETTNGVRIKSWQGGSGSVKQVMFSNIQVSNVANPIIIDQYYCDGGGCHNETSAVAVSNINYINIKGTYTKEPVRFACSDSLPCTGISLSTIELKPATGKASSLDPFCWKAHGELKTKTLPPIQCLKTEKSPEAASRSNNDAC 435
BLAST of rna-XM_004489772.3 vs. Araport11
Match: | (Symbols: PGX1 | POLYGALACTURONASE INVOLVED IN EXPANSION 1 | chr3:9777025-9780267 FORWARD LENGTH=470) HSP 1 Score: 391.349 bits (1004), Expect = 1.752e-131 Identity = 203/443 (45.82%), Postives = 281/443 (63.43%), Query Frame = 0
Query: 103 PKYSPS-TPPPKAYSIIFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAW-SGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPI-----QEKYHLDDPFCWQTFGELRTPTVP-PIG-CLQ---IGKPSNNRIQTDHD-IC 532
P SP+ P P +FN+ YGAKGDG +DD+KA W A CKV + +PA F V ++ GP CK V Q++G ++AP +W + + QW+ F + +TIQG+G ++GRG WW Y TQT + +P KPTALRFY S TV I+I NSP CHLKFD+ +GV V++++ISSP +SPNTDGIHLQN+++V I S +ACGDDC+SIQTG SNV++H++NCGPGHGISIG LGKD + ACVS+I V D++I N++ GVRIKTWQGG G V+ + FSN+QV +V++PIVIDQ+YCDK C N T AV+++G+ Y I G++TV+PV ACS+++PC+DV L + L+P + + CW ++G+ + P VP IG CL+ IG + ++ +D IC
Sbjct: 50 PTGSPAPAPYPSTNEGVFNIFSYGAKGDGVSDDSKALVGAWKAACKVVGGKVEIPAGTQFLVKAVTLQGP-CKEETVVQIEGILVAPEKIGSWPNSSLFQWLNFKWVSHLTIQGSGTLNGRGYNWWNLDTY---------------QTQT--------RNKYIPPMKPTALRFYSSNNVTVRDISIVNSPLCHLKFDDSDGVKVNNITISSPENSPNTDGIHLQNTRNVEIQHSNIACGDDCVSIQTGSSNVHIHHINCGPGHGISIGGLGKDKSVACVSDIIVEDISIQNTLAGVRIKTWQGGLGVVKNLTFSNIQVKDVKVPIVIDQYYCDKSKCKNQTRAVSISGVKYNNIVGSFTVQPVRIACSNNVPCMDVDLMDIRLRPSGGIRGLQTHQQQQALCWNSYGKTQGPLVPSSIGYCLRKSNIGGYYSQKVSRSYDKIC 468
BLAST of rna-XM_004489772.3 vs. Araport11
Match: | (Symbols: PGLR | | chr5:4724509-4725859 FORWARD LENGTH=314) HSP 1 Score: 374.4 bits (960), Expect = 4.501e-127 Identity = 180/284 (63.38%), Postives = 207/284 (72.89%), Query Frame = 0
Query: 119 FNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQ 402
NVLD+GAKGDG +DDTKAFE W CKV AST++VP+ F VGP+SF G CK IVFQL+G IIAPT+ +AW +LQWIEF L GITI+G G+IDGRGS+WW D MG KMP KPTALRFYGS G TV+GITIQNSPQ HLKFDNC + V D + SSPGDSPNTDGIHLQNS+D +I+ S LACGDDCISIQTGCSN+ +H+V+CGPGHGISIG LGKDNT+ACVSNITVRDV +H + NGVRIK+WQ
Sbjct: 51 INVLDHGAKGDGTSDDTKAFEDAWQVACKVAASTLLVPSGSTFLVGPVSFLGKECKEKIVFQLEGKIIAPTSASAWGSGLLQWIEFKALQGITIKGKGIIDGRGSVWWNDM-----------------------------MGTKMPRTKPTALRFYGSNGVTVSGITIQNSPQTHLKFDNCISIQVSDFTTSSPGDSPNTDGIHLQNSQDAVIYRSTLACGDDCISIQTGCSNINIHDVDCGPGHGISIGGLGKDNTKACVSNITVRDVTMHETTNGVRIKSWQ 305
BLAST of rna-XM_004489772.3 vs. Araport11
Match: | (Symbols: PGX3 | POLYGALACTURONASE INVOLVED IN EXPANSION3 | chr1:17766921-17769625 FORWARD LENGTH=475) HSP 1 Score: 376.711 bits (966), Expect = 9.607e-126 Identity = 192/407 (47.17%), Postives = 255/407 (62.65%), Query Frame = 0
Query: 118 IFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAW--SGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVK--PVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPPIGCLQIGKP 520
+F+V +GA GDG+ DDT AF+ W A C VE+ ++ P VF + FSGP CKP +VFQLDG ++ P P W QW+ F +LDG T G G ++G G WW D P P + P PT +RF+ S V G+ IQNSPQ H+KFD C GVL++++ ISSP SPNTDGIHL N++ V I++S ++ GDDCISI TGCS+V + V CGP HGISIGSLG N++ACVSNITVR+ I +S NG+R+KTWQGG+GSV +LF N+Q+ V I++DQ+YC + C N TSAV + + Y IKGTY V+ P+HFACSD++ C +++++ VEL P +E +DDPFCW +G+ T T+PPI CL G P
Sbjct: 79 VFDVTSFGAVGDGSCDDTAAFQDAWKAACAVESGVVLAPEGGVFKITSTIFSGP-CKPGLVFQLDGVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWW-DLP-------------------CKPHRGPDGSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLGVHNSQACVSNITVRNTVIRDSDNGLRVKTWQGGTGSVSNLLFENIQMENVLNCIIVDQYYCQSKDCRNETSAVKVFDVEYRNIKGTYDVRSPPIHFACSDTVACTNITMSEVELLP-EEGELVDDPFCWNAYGKQETLTIPPIDCLLDGSP 463
BLAST of rna-XM_004489772.3 vs. Araport11
Match: | (Symbols: PGL1 | POLYGALACTURONASE LIKE 1 | chr1:21258206-21259922 REVERSE LENGTH=434) HSP 1 Score: 361.303 bits (926), Expect = 2.616e-120 Identity = 192/428 (44.86%), Postives = 269/428 (62.85%), Query Frame = 0
Query: 106 SPSTPPPKAYS-------IIFNVLDYGAKGDGNTDDTKAFEATWAATCKV---EASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAW-SGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVK--PVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPPIGCLQIGKP 520
SPS P AY+ +F+V +GA GD +TDDT AF+ W A C +++ ++VP + F V P +F+GP C+ N+V Q+DG I++P P +W S QW+ F +++G++IQG+GVI+GRG WW + P + L N + P + P A+R + S + GI NS Q H++FDNC+ V+V V I +P SPNTDGIH++N+ +V I +S ++ GDDCISI GC NV + NV CGP HGISIGSLG N++A VSNITV + I NS NGVRIKTWQGGSGSV ++FSN+ + V+ PI+IDQ+YC C N TSAV ++ + Y IKGTY ++ P+HF CSDS+PC +++LT V+L P + + HL++PFCW +G ++ TVPP+ CL P
Sbjct: 28 SPSPAPNPAYNDNDNIAPTVFDVTSFGAIGDCSTDDTSAFKMAWDAACMSTGPKSALLLVPYTFCFLVKPTTFNGP-CRTNLVLQIDGFIVSPDGPRSWPSNYQRQWMMFYRVNGLSIQGSGVINGRGQKWW-----NLPCKPHKGL---------------NGTTQTGPCDSPVAIRLFQSSKVRIQGINFMNSAQFHVRFDNCSDVVVDSVIIKAPASSPNTDGIHIENTHNVQIRNSMISNGDDCISIGAGCFNVDIKNVTCGPSHGISIGSLGVHNSQAYVSNITVTNSTIWNSDNGVRIKTWQGGSGSVSRIVFSNILMVNVRNPIMIDQYYCQTNNCANQTSAVIISDVLYANIKGTYDLRSPPIHFGCSDSVPCTNLTLTEVDLFPSKGQ-HLENPFCWNAYGSMKI-TVPPVYCLLDAPP 432
BLAST of rna-XM_004489772.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:504897-507099 REVERSE LENGTH=491) HSP 1 Score: 362.073 bits (928), Expect = 8.722e-120 Identity = 191/411 (46.47%), Postives = 258/411 (62.77%), Query Frame = 0
Query: 118 IFNVLDYGAKGDGNTDDTKAFEATWAATCKVEAST---MVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVM--LQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPG-HGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVK--PVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPPIGCLQIGKP 520
I+NV YGA GDG TDDT+AF+ W ++C E +T ++VP Y F + F+GP C+ FQ+DGTI+ P P +W + QW+ F +++G+ ++G GVIDGRG WW D P P V P + P ALRF+ S V G+ I+NSPQ H +FD C GV V + I++P SPNTDGIH++NS V I++S ++ GDDC+SI +G +V + N+ CGPG HGISIGSLG N+RACVSNITVRD I S NGVRIKTWQGGSGSV GV F+N+ V V+ PI+IDQ+YC + C N TSAV ++ I Y+ IKGTY ++ P+HF CSD++PC +++L+ +EL P + + L DPFCW +G ++PP+ CL P
Sbjct: 88 IYNVRKYGAVGDGETDDTEAFKTAWDSSCNNENNTDSVLLVPYGYTFMIQSTIFTGP-CRSYQFFQVDGTIVTPDGPESWPSNISKRQWLVFYRVNGMALKGEGVIDGRGQKWW-DLPC------------------KPHRSVNKSAIVTGPCDSPIALRFFMSSNLRVEGLQIKNSPQFHFRFDGCQGVHVESLHITAPPLSPNTDGIHIENSNSVTIYNSIISNGDDCVSIGSGSYDVDIRNLTCGPGGHGISIGSLGNHNSRACVSNITVRDSVIKYSDNGVRIKTWQGGSGSVSGVTFNNIHVDSVRNPIIIDQYYCMTKDCANKTSAVFVSDIAYQGIKGTYDIRSPPMHFGCSDAVPCTNLTLSDIELLPAKGEIVL-DPFCWNAYGIAEELSIPPVWCLMSDPP 477
BLAST of rna-XM_004489772.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:816210-818428 FORWARD LENGTH=467) HSP 1 Score: 341.658 bits (875), Expect = 3.680e-112 Identity = 184/422 (43.60%), Postives = 255/422 (60.43%), Query Frame = 0
Query: 106 SPSTPPPKAYSIIFNVLDYGAKGDGNTDDTKAFEATWAATCKVE----ASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVM--LQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKM--PSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPG-HGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVK--PVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPPIGCLQ 516
SPS + ++++V YGA G+G DDT +F+ W + C AS + VP + F + F+GP C+ FQ+DGTI+ P +W + QW+ F +++G+ +QG GVIDGRG WW P P QN K+ P P ALRF+ S V G++I+NSPQ HLK D C+ V ++ + I SP SPNTDGIH++NS V I++S ++ GDDC+SI G ++ + N+ CGPG HGISIGSLG+ N+ ACVSN+TVRD I S NGVRIKTWQGGSGSV GV F N+ V V+ PI+IDQ+YC ++C N TSAV + I Y+ IKGTY ++ P+HF CS+++PC +++L+ +EL P +E + PFCW +G +VP I CL+
Sbjct: 52 SPSRSQDLDHEVVYDVRKYGAVGNGVADDTVSFKTAWDSACSNNKNNTASVLHVPYGFTFMIRSTIFTGP-CRSYQYFQVDGTIVPRDGPKSWPSSLNKRQWLAFYRINGMALQGAGVIDGRGQNWWD----------------------LPCKPHQNVNKTKLAGPCESPAALRFFMSSNVIVKGLSIKNSPQVHLKLDGCHVVHINSLRIISPPASPNTDGIHIENSNSVEIYNSVISNGDDCVSIGPGAYDIDIRNITCGPGGHGISIGSLGEKNSHACVSNVTVRDSFIKFSENGVRIKTWQGGSGSVSGVTFDNIHVDTVRNPIIIDQYYCTTKSCANKTSAVFVNDIVYQSIKGTYDIRSPPMHFGCSNNVPCTNLTLSNIELLPSKEDIVV-GPFCWNAYGITDEFSVPLISCLK 449
BLAST of rna-XM_004489772.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:8327382-8329622 FORWARD LENGTH=460) HSP 1 Score: 301.982 bits (772), Expect = 7.840e-97 Identity = 160/370 (43.24%), Postives = 216/370 (58.38%), Query Frame = 0
Query: 118 IFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAW-SGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDK-RTCTNHTSAVALAGINYERIKGTY-TVKPVHFACSDSLPCVDVSLTTVELK 484
+ NV +GA GDG +DDT+AF + W+ C S +VP + V F+GP C+ ++ Q+DGTI+AP P+ W S W+EF+KL G+ QG GVIDG GS WW ++ P + PTAL S G V+G+TIQNS Q + + V V V +SSPGDSPNTDGIH+ S +V++ K+ GDDC+SI SN+ + N+ CGPGHGISIGSLGKDNT V+ + + + + NG+RIKT+QGGSG VQG+ F+NV++ +V PI+IDQFYCD TC N TSAV ++ I Y I GT + K + FACSD++PC + L V L+
Sbjct: 66 LVNVDTFGAAGDGVSDDTQAFVSAWSKACSTSKSVFLVPEGRRYLVNATKFNGP-CEQKLIIQIDGTIVAPDEPSNWDSKFQRIWLEFSKLKGVVFQGKGVIDGSGSKWWA---------------ASCKKNKSNPCK-----------SAPTALTIESSSGVKVSGLTIQNSQQMNFIIARSDSVRVSKVMVSSPGDSPNTDGIHITGSTNVILQDCKIGTGDDCVSIVNASSNIKMKNIYCGPGHGISIGSLGKDNTTGIVTQVVLDTALLRETTNGLRIKTYQGGSGYVQGIRFTNVEMQDVANPILIDQFYCDSPTTCQNQTSAVKISQIMYRNITGTTKSAKAIKFACSDTVPCSHIVLNNVNLE 408
BLAST of rna-XM_004489772.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q949Z1|PGLR4_ARATH (Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV=1) HSP 1 Score: 376.711 bits (966), Expect = 9.178e-125 Identity = 192/407 (47.17%), Postives = 255/407 (62.65%), Query Frame = 0
Query: 118 IFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAW--SGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVK--PVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPPIGCLQIGKP 520
+F+V +GA GDG+ DDT AF+ W A C VE+ ++ P VF + FSGP CKP +VFQLDG ++ P P W QW+ F +LDG T G G ++G G WW D P P + P PT +RF+ S V G+ IQNSPQ H+KFD C GVL++++ ISSP SPNTDGIHL N++ V I++S ++ GDDCISI TGCS+V + V CGP HGISIGSLG N++ACVSNITVR+ I +S NG+R+KTWQGG+GSV +LF N+Q+ V I++DQ+YC + C N TSAV + + Y IKGTY V+ P+HFACSD++ C +++++ VEL P +E +DDPFCW +G+ T T+PPI CL G P
Sbjct: 79 VFDVTSFGAVGDGSCDDTAAFQDAWKAACAVESGVVLAPEGGVFKITSTIFSGP-CKPGLVFQLDGVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWW-DLP-------------------CKPHRGPDGSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLGVHNSQACVSNITVRNTVIRDSDNGLRVKTWQGGTGSVSNLLFENIQMENVLNCIIVDQYYCQSKDCRNETSAVKVFDVEYRNIKGTYDVRSPPIHFACSDTVACTNITMSEVELLP-EEGELVDDPFCWNAYGKQETLTIPPIDCLLDGSP 463
BLAST of rna-XM_004489772.3 vs. UniProtKB/Swiss-Prot
Match: sp|P43212|PGLR2_CRYJA (Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 2.061e-91 Identity = 152/371 (40.97%), Postives = 222/371 (59.84%), Query Frame = 0
Query: 118 IFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKM--PSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRT-CTNHTSAVALAGINYERIKGT-YTVKPVHFACSDSLPCVDVSLTTVELK 484
IFNV YGA GDG D T+AF W A CK ++ ++VP + F V + F+GP C+P+ F++DG I A NP +W + W++F KL G T+ G GVIDG+G WW + K + GR++ ++PTA++F S G + G+ + NSP+ HL F NC GV + +SI++P DSPNTDGI + SK+ + + + GDDC++I TG SN+ + ++ CGPGHGISIGSLG++N+RA VS + V ++ NG+RIKTWQGGSG +++ NV++ + PI+I+QFYC + C N SAV + + Y+ I+GT T + CSDS+PC D+ L+ + LK
Sbjct: 58 IFNVEKYGAVGDGKHDCTEAFSTAWQAACKKPSAMLLVPGNKKFVVNNLFFNGP-CQPHFTFKVDGIIAAYQNPASWKNNRI-WLQFAKLTGFTLMGKGVIDGQGKQWWA---------GQCKWV----------------NGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKFIDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQDVTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDISLK 401
BLAST of rna-XM_004489772.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q7M1E7|PGLR2_CHAOB (Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 5.287e-90 Identity = 152/371 (40.97%), Postives = 213/371 (57.41%), Query Frame = 0
Query: 116 SIIFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRT-CTNHTSAVALAGINYERIKGT-YTVKPVHFACSDSLPCVDVSLTTVELK 484
+ +FNV YGA GDG D T+AF TW A CK ++ ++VPA+ F+V + F GP C+P++ F++DGTI+A +P W + W++F +L + G GVIDG+G WW V N N+PTA++ S TV +T+ NSP+ HL F C GV + + I +P DSPNTDGI + SK I + GDDCI+I TG SN+ + ++ CGPGHGISIGSLG+DN+RA VS++ V ++ NG+RIKTWQGGSG + + NV++ + PI+I+QFYC + C N SAV + G+ Y+ I GT T + CSDS+PC + L+ V LK
Sbjct: 56 ATVFNVEQYGAVGDGKHDSTEAFATTWNAACKKASAVLLVPANKKFFVNNLVFRGP-CQPHLSFKVDGTIVAQPDPARWKNSKI-WLQFAQLTDFNLMGTGVIDGQGQQWW-----------------------AGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTGSSNITIKDLICGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGLASYITYENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTSATAAAIQLMCSDSVPCTGIQLSNVSLK 401
BLAST of rna-XM_004489772.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q94AJ5|PGLR5_ARATH (Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana OX=3702 GN=At1g80170 PE=1 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 1.201e-88 Identity = 149/413 (36.08%), Postives = 229/413 (55.45%), Query Frame = 0
Query: 103 PKYSPSTPPPKAYSIIFNVLDYGAKGDGNTDDTKAFEATWAATCKVEAST-MVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGV-MLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRT-CTNHTSAVALAGINYERIKGTYTVK-PVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPP 511
P+ + P++ ++ +V ++GAKG+G TDDTKAF W C + T ++VP +Y + PI SGP CK + Q+ GTIIAP +P+ W G+ +W+ F L +T++G G ++G G WW+ H + P PTAL F+ V + + +S Q H+ +C V + + + +P SPNTDGIH+ S+ ++I ++ ++ GDDCISI + + + N+ CGPGHGISIGSLGK + V +ITV I ++ NGVRIKTWQGGSG V ++F N++++ V PI+IDQ+YCD R C N TSA+++ I++ ++GT K + +CSDS PC ++ L ++L+P + FCW+ +G PP
Sbjct: 38 PRRQSRSTRPRSERLL-HVGNFGAKGNGVTDDTKAFADAWKTACSSKVKTRILVPENYTCLLRPIDLSGP-CKARLTLQISGTIIAPNDPDVWEGLNRRKWLYFHGLSRLTVEGGGTVNGMGQEWWER---------------SCKHNHSNPC-----------RGAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGIHISVSRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGSLGKSKSWEEVRDITVDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKPCANQTSAISIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDIDLEP-SNGDGFTESFCWEAYGSSSGQVYPP 421
BLAST of rna-XM_004489772.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FY19|PGLR2_JUNAS (Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 3.481e-85 Identity = 150/371 (40.43%), Postives = 212/371 (57.14%), Query Frame = 0
Query: 116 SIIFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYC-DKRTCTNHTSAVALAGINYERIKGT-YTVKPVHFACSDSLPCVDVSLTTVELK 484
+I+FNV YGA GDG D T AFE TW A C ++ +VPA+ F V + F GP C+P+ F++DGTI A +P W + W+ F +L + G GVIDG+G+ WW D + K I V N+ GR PTA++ S TV +T+ NSP+ HL F C+GV + + I +P DSPNTDGI + SK I + GDDC+++ TG SN+ + ++ CGPGHG+SIGSLGK N+R+ VS + + ++ NG+RIKTWQGGSG + + NV++ + PI+I+QFYC C N SAV + + ++ I GT T + CSDS+PC ++ L+ V LK
Sbjct: 57 AIVFNVEHYGAVGDGKHDSTDAFEKTWNAACNKLSAVFLVPANKKFVVNNLVFYGP-CQPHFSFKVDGTIAAYPDPAKWKNSKI-WMHFARLTDFNLMGTGVIDGQGNRWWSD---------QCKTI--------NGRTVCNDKGR------PTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTDGIDIFASKRFEIEKCTIGTGDDCVAVGTGSSNITIKDLTCGPGHGMSIGSLGKGNSRSEVSFVHLDGAKFIDTQNGLRIKTWQGGSGLASHITYENVEMINAENPILINQFYCTSAAACKNQRSAVKIQDVTFKNIHGTSATTAAIQLMCSDSVPCSNIKLSNVFLK 402
BLAST of rna-XM_004489772.3 vs. UniProtKB/Swiss-Prot
Match: sp|P35336|PGLR_ACTDE (Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 1.122e-81 Identity = 148/367 (40.33%), Postives = 207/367 (56.40%), Query Frame = 0
Query: 120 NVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDK-RTCTNHTSAVALAGINYERIKGTYTVK-PVHFACSDSLPCVDVSLTTVELK 484
NV D+GAKGDG DDTKAFE W A C +S +++ + V PISFSGP CK + Q+ GTI A + + + W+ F + + ++G G I+G G IWWQ+ N LP ++ PTAL FY S V + I+N+ Q H+ FDNC V ++ +++P +SPNTDGIH+ ++++ I S + GDDCISI G V V+++ CGPGHGISIGSLG N+ A VS++ V + + NGVRIKTWQGGSGS + F NV++ V+ PI+IDQ YCD+ + C +SAV + + Y+ IKGT + F CS PC + L V+L+
Sbjct: 91 NVDDFGAKGDGR-DDTKAFEKAWKAACSSTSSAVLLVPKKNYLVRPISFSGP-CKSGLTMQIYGTIEASDDRSDYRKDGRHWLVFDSVQNLRVEGGGTINGNGKIWWQNSCKTNK-----------------ALPCKD---------APTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASNLMVTAPENSPNTDGIHVTGTQNIHISSCVIGTGDDCISIVNGSRKVRVNDITCGPGHGISIGSLGYGNSEAHVSDVVVNGAKLCGTTNGVRIKTWQGGSGSASNIKFQNVEMHNVENPIIIDQNYCDQDKPCQEQSSAVQVKNVVYQNIKGTCASNVAITFDCSKRFPCQGIVLEDVDLE 429
BLAST of rna-XM_004489772.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q02096|PGLR_PERAE (Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 1.219e-77 Identity = 145/388 (37.37%), Postives = 214/388 (55.15%), Query Frame = 0
Query: 89 PPYKSIPISPPISKPKYSPSTPPPKAYSIIFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSG-VMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRT-CTNHTSAVALAGINYERIKGTYTVK-PVHFACSDSLPC 473
P S+ P+ P+ SP T +V D+GA+GDG TDDTKAFE W C S ++VP + + + I+FSGP CK ++ ++ GTI A ++ + W G +WIEF + +T++G G +G G WW + + LP ++ PTAL F V+ ++I++S + HL FD C V+ ++ +++P SPNTDGIH+ ++ + + +S + GDDCISI++G V N+ CGPGHGISIGSLG N+ A VS + V N+ ++ NG+RIKTWQGGSGS + + F N+ + V PI+IDQ+YCD + C SAV ++ + Y I+GT + V F CS S PC
Sbjct: 63 PSILSLERFNPVGGPETSPDTD--------ISVDDFGARGDG-TDDTKAFEKAWKDACS-SGSVLIVPENKNYLLKQITFSGP-CKSDLRVKIRGTIEASSDQSDWVGHNRKRWIEFEDISNLTLEGGGTSNGNGETWWDS-----------------SCKRKKSLPCKS---------APTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQDVIASNLMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESGSKMVIATNITCGPGHGISIGSLGDRNSEAHVSGVLVDGGNLFDTTNGLRIKTWQGGSGSAKNIKFQNIVMHNVTNPIIIDQYYCDSKDPCPEQESAVKVSNVAYMNIRGTSASEVAVKFDCSKSSPC 413
BLAST of rna-XM_004489772.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SFB7|QRT2_ARATH (Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2) HSP 1 Score: 252.677 bits (644), Expect = 3.718e-77 Identity = 145/383 (37.86%), Postives = 210/383 (54.83%), Query Frame = 0
Query: 105 YSPSTPPPKAYSIIFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVV-PADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDK-RTCTNHTSAVALAGINYERIKGTYTVKP--VHFACSDSLPCVDVSLTTVEL 483
Y+P + P FNV +GAK +GN DD+KAF W A C +V P + + + ++FSGP I+F++ G I A NP+ + WI F ++ + ++G G IDG G IWW NP Q P L PTA+ F V+ I ++N+ Q HL F +C V ++ ++SP DSPNTDGIH+ ++++LI S + GDDCISI +G NV + CGPGHGISIGSLG+DN+ A VSN+ V + + NGVRIKTWQGG G + ++F ++ + V PI+I+Q YCD+ C SAV ++ + Y+ I+GT + +P V F CS ++PC +S+ V+L
Sbjct: 62 YAPRSSPRS-----FNVNTFGAKANGN-DDSKAFMKAWEAACSSTGIVYIVAPKNRDYMLKAVTFSGPCKSSLIIFKIYGRIEAWENPSDYKE-RRHWIVFENVNNLRVEGGGRIDGNGHIWWPKSCKINP--------------QLPCLGA------------PTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSGTQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEAYVSNVVVNKATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEACPEQKSAVQVSNVLYKNIQGTSS-RPIAVKFVCSKNIPCRGISMQNVKL 410
BLAST of rna-XM_004489772.3 vs. UniProtKB/Swiss-Prot
Match: sp|O23147|ADPG1_ARATH (Polygalacturonase ADPG1 OS=Arabidopsis thaliana OX=3702 GN=ADPG1 PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 1.278e-76 Identity = 138/369 (37.40%), Postives = 203/369 (55.01%), Query Frame = 0
Query: 121 VLDYGAKGDGNTDDTKAFEATWAATCKVEA-STMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQG--NGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNK-PTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGT-YTVKPVHFACSDSLPCVDVSLTTVELK 484
V ++GAKGDG TDDT+AF+ W C +T +VP + + F GP CK FQ+ GT+ A T + + W+ ++ ++I G G+I+G G WWQ+ ++ + P K PTAL Y V + ++N+ Q + + CN V V +V I++PGDSPNTDGIH+ N++++ + +S + GDDCISI+ G N+ + ++ CGPGHGISIGSLG DN++A VS I V S NGVRIKT+QGGSG+ + + F N+++ V+ PI+IDQ YCDK C + SAV + + Y+ I GT T + CS+ PC + L V++K
Sbjct: 70 VSNFGAKGDGKTDDTQAFKKAWKKACSTNGVTTFLVPKGKTYLLKSTRFRGP-CKSLRNFQILGTLSASTKRSDYKDKN-HWLILEDVNNLSIDGGSTGIINGNGKTWWQNSC---------------------------KIDKSKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIFDLTCGPGHGISIGSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIRMENVKNPIIIDQDYCDKDKCEDQESAVQVKNVVYKNISGTSATDVAITLNCSEKYPCQGIVLENVKIK 409
BLAST of rna-XM_004489772.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8RY29|ADPG2_ARATH (Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=1 SV=2) HSP 1 Score: 250.751 bits (639), Expect = 2.299e-76 Identity = 140/369 (37.94%), Postives = 206/369 (55.83%), Query Frame = 0
Query: 121 VLDYGAKGDGNTDDTKAFEATWAATCKVE-ASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQG--NGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNK-PTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVK-PVHFACSDSLPCVDVSLTTVELK 484
V D+GAKGDG TDDT+AF W C A ++VP + + I +GP C + Q+ GT+ A + + + +WI F ++ +++ G GV+DG G WWQ+ N + P K PTAL FY S V + ++N+ Q + + C+ V V +V +++P DSPNTDGIH+ N++++ + S + GDDCISI++G NV ++++ CGPGHGISIGSLG DN++A VS +TV + + NGVRIKT+QGGSG+ ++F N+Q+ V+ PI+IDQ YCDK CT SAV + + Y I GT + + F CS + PC + L V +K
Sbjct: 70 VSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVNLLVPKGNTYLLKSIQLTGP-CNSILTVQIFGTLSASQKRSDYKDIS-KWIMFDGVNNLSVDGGDTGVVDGNGETWWQNSCKRN---------------------------KAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVKNPIIIDQDYCDKSKCTTEKSAVQVKNVVYRDISGTSASENAITFNCSKNYPCQGIVLDRVNIK 409
BLAST of rna-XM_004489772.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XK12|A0A1S2XK12_CICAR (Polygalacturonase At1g48100-like OS=Cicer arietinum OX=3827 GN=LOC101495607 PE=3 SV=1) HSP 1 Score: 1095.49 bits (2832), Expect = 0.000e+0 Identity = 532/532 (100.00%), Postives = 532/532 (100.00%), Query Frame = 0
Query: 1 MSGLSLKGFTYMLLIAFLIWSSNFKCCIARRGKHWRQSISFSSSLYKKKGKSYSYGNDHKKNHHNGGSNSKPKSPPTHKSVPQLPNSPPPYKSIPISPPISKPKYSPSTPPPKAYSIIFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPPIGCLQIGKPSNNRIQTDHDIC 532
MSGLSLKGFTYMLLIAFLIWSSNFKCCIARRGKHWRQSISFSSSLYKKKGKSYSYGNDHKKNHHNGGSNSKPKSPPTHKSVPQLPNSPPPYKSIPISPPISKPKYSPSTPPPKAYSIIFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPPIGCLQIGKPSNNRIQTDHDIC
Sbjct: 1 MSGLSLKGFTYMLLIAFLIWSSNFKCCIARRGKHWRQSISFSSSLYKKKGKSYSYGNDHKKNHHNGGSNSKPKSPPTHKSVPQLPNSPPPYKSIPISPPISKPKYSPSTPPPKAYSIIFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPPIGCLQIGKPSNNRIQTDHDIC 532
BLAST of rna-XM_004489772.3 vs. UniProtKB/TrEMBL
Match: tr|G7K092|G7K092_MEDTR (Polygalacturonase OS=Medicago truncatula OX=3880 GN=11407103 PE=3 SV=2) HSP 1 Score: 1011.13 bits (2613), Expect = 0.000e+0 Identity = 491/536 (91.60%), Postives = 511/536 (95.34%), Query Frame = 0
Query: 1 MSGLSLKGFTYMLLIAFLIWSSNFKCCIARRGKHWRQSISFSSSLYKKKGKSYSYGNDHKKNHHNGGSNSKPKSPPTHKSVPQLPNSPPPYKSIPISPPISKPKYSPSTPPPKA----YSIIFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPPIGCLQIGKPSNNRIQTDHDIC 532
MSG SL+GFTYMLLIAFLIWSSNF+CCIARRGKH RQS +FSSSL+KKKGKSY+ GN H KNHH+GGSNSKPKSPP HKS P LP SPP +KS+P SPPISKPKYSPS PPPKA +S FNVLDYGAKGDGNTDDTKAF+ATWAATCKVEASTMV+PA+Y+FYVGPISFSGPYCK NIVFQLDGTIIAPTNPNAWSGV LQW+EFTKL+GITIQGNGVIDGRGS+WWQDFPYDNPIDDEEKLIVPLN TQ PP+PVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIH+SMNGVRIKTWQGGSGSVQGVLFSN+QVSEVQLPIVIDQFYCDKR CTNHTSAV+LAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPIQEKYHL DPFCWQTFGELRTPTVPPIGCLQIGKPSNNRIQTDHDIC
Sbjct: 1 MSGFSLRGFTYMLLIAFLIWSSNFECCIARRGKHLRQSRTFSSSLFKKKGKSYN-GNSHNKNHHSGGSNSKPKSPP-HKSTPPLPKSPPSHKSVPSSPPISKPKYSPSIPPPKANNGVHSTFFNVLDYGAKGDGNTDDTKAFQATWAATCKVEASTMVIPANYIFYVGPISFSGPYCKANIVFQLDGTIIAPTNPNAWSGVTLQWLEFTKLEGITIQGNGVIDGRGSVWWQDFPYDNPIDDEEKLIVPLNQTQKPPMPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHDSMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKRVCTNHTSAVSLAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPIQEKYHLYDPFCWQTFGELRTPTVPPIGCLQIGKPSNNRIQTDHDIC 534
BLAST of rna-XM_004489772.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D5B7L0|A0A9D5B7L0_PEA (Polygalacturonase OS=Pisum sativum OX=3888 GN=KIW84_023151 PE=3 SV=1) HSP 1 Score: 956.436 bits (2471), Expect = 0.000e+0 Identity = 468/537 (87.15%), Postives = 496/537 (92.36%), Query Frame = 0
Query: 1 MSGLSLKGFTYMLLIAFLIWSSNFKCCIARRGKHWRQSISFSSSLYKKKGKSYSYGNDHKKNHHNGGSNSKPKSPPTHKSVPQLPNSPPPYKSIPISPPISKPKYSPSTPPPKAY-----SIIFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPPIGCLQIGKPSNNRIQTDHDIC 532
MS L+LK FTYM LI FLIWSSNF+CCIARRGKHWRQ+ +FSSSL+KKKGKSY+ GN H KNHHNGGSNSKPKSPP +K++P SPPISKPKYSPSTPPP+ Y S FNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTM+VPA+Y F+VGPISFSGPYCKPNIVFQLDGTIIAPTNP+AWSGV LQW+EFTKL+GI IQGNGVIDGRGS+WWQDFPYDNPIDDEEKLI+PLNHTQ PP+PVQNEMGR MPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFD+CN VLVHDVSISSPGDSPNTDGIHLQNSKDVLI+SSKLACGDDCISIQTGCSNVYVHNV+CGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSN+QV+EVQLPIVIDQFYCDKRTCTNHTSAV+L GINYERIKGTYTVKPVHFACSDS PCVDVSL TVELKPIQE+YHL DPFCWQTFGEL+TPTVPPIGCLQIGKP+NNRIQTDHDIC
Sbjct: 27 MSALTLKAFTYMFLITFLIWSSNFECCIARRGKHWRQTRTFSSSLFKKKGKSYN-GNTHNKNHHNGGSNSKPKSPPPLSPKSPPS-----HKNVPSSPPISKPKYSPSTPPPRGYNGMQHSTFFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMIVPANYTFFVGPISFSGPYCKPNIVFQLDGTIIAPTNPSAWSGVTLQWLEFTKLEGIVIQGNGVIDGRGSVWWQDFPYDNPIDDEEKLIIPLNHTQNPPMPVQNEMGRTMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDSCNRVLVHDVSISSPGDSPNTDGIHLQNSKDVLIYSSKLACGDDCISIQTGCSNVYVHNVDCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNIQVTEVQLPIVIDQFYCDKRTCTNHTSAVSLEGINYERIKGTYTVKPVHFACSDSFPCVDVSLATVELKPIQEQYHLYDPFCWQTFGELKTPTVPPIGCLQIGKPTNNRIQTDHDIC 557
BLAST of rna-XM_004489772.3 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5MEW2|A0A6A5MEW2_LUPAL (Phosphatidylinositol 3-kinase OS=Lupinus albus OX=3870 GN=Lal_00016331 PE=3 SV=1) HSP 1 Score: 880.167 bits (2273), Expect = 0.000e+0 Identity = 429/537 (79.89%), Postives = 468/537 (87.15%), Query Frame = 0
Query: 1 MSGLSLKGFTYMLLIAFLIWSSNFKCCIARRGKHWRQSISFSSSLYKKKGKSYSYGNDHKKNHHNGGSNSKPKSPPTHKS--VPQLPNSPPPYKSIPISPPISKPKYSPSTPPPKAY----SIIFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPPIGCLQIGKPSNNRIQTDHDI 531
MSGLS+ GFTYM LIA+LIW SNF+ CIARR KHWR S + S S +KKKGKSY Y N H NHH GGS KPK PP++KS P LP +PP YKS S P TPPP AY S IFNVLD+GAKGDG+TDDTKAF+ATW A C VEASTM+VPADYVFYVGPISF GPYCKPNIVFQLDGTI+APTN NAW G +LQW+EFTKL GITIQGNGVIDGRGS+WWQD P+D PIDDEEKLIV LNHT+ P+P+Q+EMGRKMPS KPTALRFYGS+ TVTGITIQNSPQCHLKFD+CNG+LVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHN+NCGPGHGISIGSLGKDNTRACVSNITV+DVN+HN+MNGVRIKTWQGGSGSVQG+LFSN+QVSEVQLPIVIDQFYCDKRTC N +SAV+L GINYERI+GTYTVKPVHFACS+ PCVDVSLT+VELKP+QE+YHL DPFCW T+GELRTPTVPPI CLQIGKPS+NRIQTDHD
Sbjct: 1 MSGLSMSGFTYMFLIAYLIWCSNFESCIARRSKHWRHSRTVSGSEFKKKGKSY-YSNSH--NHHGGGS--KPK-PPSNKSSSTPTLPKAPP-YKSTTPSSPPIPKP-KVGTPPPNAYNAAHSTIFNVLDFGAKGDGSTDDTKAFQATWVAACNVEASTMLVPADYVFYVGPISFCGPYCKPNIVFQLDGTIVAPTNSNAWGGGLLQWLEFTKLVGITIQGNGVIDGRGSVWWQDQPFDEPIDDEEKLIVLLNHTRKTPVPIQSEMGRKMPSIKPTALRFYGSFNTTVTGITIQNSPQCHLKFDSCNGILVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNINCGPGHGISIGSLGKDNTRACVSNITVKDVNMHNTMNGVRIKTWQGGSGSVQGILFSNIQVSEVQLPIVIDQFYCDKRTCKNQSSAVSLEGINYERIRGTYTVKPVHFACSEYSPCVDVSLTSVELKPVQEQYHLYDPFCWHTYGELRTPTVPPIPCLQIGKPSSNRIQTDHDF 529
BLAST of rna-XM_004489772.3 vs. UniProtKB/TrEMBL
Match: tr|A0A172GY42|A0A172GY42_LUPAN (Putative polygalacturonase OS=Lupinus angustifolius OX=3871 PE=3 SV=1) HSP 1 Score: 876.7 bits (2264), Expect = 0.000e+0 Identity = 437/565 (77.35%), Postives = 483/565 (85.49%), Query Frame = 0
Query: 1 MSGLSLKGFTYMLLIAFLIWSSNFKCCIARRGKHWRQSISFSSSLYKKKGKSYSYGNDHKKNHHNGGSNSKPKSPPTHKSVPQLPNSPPPYKSIPISPPISKPKY-SPSTPPPKAY----SIIFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPT----------------------------ALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPPIGCLQIGKPSNNRIQTDHDIC 532
MSG+S++GFT MLLIA+LIW SNF+ CIA R KHW S S S S +KKKGKSYS N H NHH G SKPK PPTHK+ P LP +PP +K+ P SPPI KPK +PSTPPPKAY S IFNVL +GAKGDGNTDDTKAF+ATWA++CKVEASTM+VP DYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTN NAW G +LQW+EFTKL GITIQGNGVIDGRGS+WWQD P+D PIDDEEKLIVPLNHT+ PPLP+Q+EMGRKMPS KPT ALRFYGS+ TVTGITIQNSPQCHLKFDNCNGVLVH+VS+SSPGDSPNTDGIHLQNSK+V+IHSSKLACGDDCISIQTGCSNVYV+++NCGPGHGISIGSLGKDNTRACVSNITVRDV +HN+MNGVRIKTWQGGSGSVQG++FSN+QVSEV+LPIVIDQFYCDKRTC N +SAV+L GINYERI+GTYTVKPVHFACSD LPCVDVSLT+VELKP+QE+YHL DPFCWQT+GELRTPTVPPIGCLQIGKPS+NR+QTDHD C
Sbjct: 1 MSGMSIRGFTCMLLIAYLIWCSNFESCIAVRSKHWMHSRSTSLSEFKKKGKSYS--NSH--NHHGIGG-SKPK-PPTHKNTPTLPKAPP-HKNTPSSPPIHKPKVGTPSTPPPKAYNRGKSTIFNVLHFGAKGDGNTDDTKAFKATWASSCKVEASTMLVPTDYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNSNAWGGGLLQWLEFTKLVGITIQGNGVIDGRGSVWWQDQPFDEPIDDEEKLIVPLNHTEKPPLPIQSEMGRKMPSIKPTVRTTLTLQDQLGLCLEVFSLHGCVFVAQALRFYGSFNTTVTGITIQNSPQCHLKFDNCNGVLVHNVSVSSPGDSPNTDGIHLQNSKNVVIHSSKLACGDDCISIQTGCSNVYVYDINCGPGHGISIGSLGKDNTRACVSNITVRDVKMHNTMNGVRIKTWQGGSGSVQGIVFSNIQVSEVKLPIVIDQFYCDKRTCKNQSSAVSLEGINYERIRGTYTVKPVHFACSDFLPCVDVSLTSVELKPVQEQYHLYDPFCWQTYGELRTPTVPPIGCLQIGKPSSNRVQTDHDSC 558
BLAST of rna-XM_004489772.3 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4Q095|A0A6A4Q095_LUPAL (Putative polygalacturonase OS=Lupinus albus OX=3870 GN=Lalb_Chr09g0326311 PE=3 SV=1) HSP 1 Score: 876.315 bits (2263), Expect = 0.000e+0 Identity = 431/536 (80.41%), Postives = 475/536 (88.62%), Query Frame = 0
Query: 1 MSGLSLKGFTYMLLIAFLIWSSNFKCCIARRGKHWRQSISFSSSLYKKKGKSYSYGNDHKKNHHNGGSNSKPKSPPTHKSVPQLPNSPPPYKSIPISPPISKPKYSPSTPPPKAY----SIIFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHTQTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPPIGCLQIGKPSNNRIQTDHDIC 532
MS +S++G T MLLIA+LIW SNF+ CIA R KHW S S S S +KKKGKSYS N H NHH G SKPK PPTHKS P LP + P +KS P SPP +PS PPPKAY S IFNVLD+GAKGDG+TDDTKAF+ATWA +CKVEASTM+VPADYVFYVGPISFSGPYCKPNIVFQLDG IIAPTN NAW G +LQW+EFTKL GITIQGNG+IDGRGS+WWQD P+D PIDDEEKLIVPLNHT+ PPLP+Q+EMGRKMPS KPTALRFYGS+ TVTGITIQNSPQCHLKFDNCNGVLVH+V++SSPGDSPNTDGIHLQNSK V IHSSKLACGDDCISIQTGCSNVYV+N+NCGPGHGISIGSLGKDNTRACVSNITVRDVN+HN+MNGVRIKTWQGGSGSVQG++FSN+QVSEV+LPIVIDQFYCDKRTC N +SAV+L GINYERI+GTYTVKPVHFACSD LPCVDVSLT+VELKP+QE+YHL DPFCWQT+GELRTPTVPPIGCLQIGKPS+NR+QTDHD+C
Sbjct: 1 MSDMSIRGLTCMLLIAYLIWCSNFESCIAGRSKHWMHSRSASPSEFKKKGKSYS--NSH--NHHGLGG-SKPK-PPTHKSTPALPKTSP-HKSTPSSPPKVG---TPSIPPPKAYNGGKSTIFNVLDFGAKGDGSTDDTKAFQATWATSCKVEASTMLVPADYVFYVGPISFSGPYCKPNIVFQLDGKIIAPTNSNAWGGGLLQWLEFTKLVGITIQGNGIIDGRGSVWWQDQPFDEPIDDEEKLIVPLNHTEKPPLPIQSEMGRKMPSIKPTALRFYGSFNTTVTGITIQNSPQCHLKFDNCNGVLVHNVNVSSPGDSPNTDGIHLQNSKYVSIHSSKLACGDDCISIQTGCSNVYVYNINCGPGHGISIGSLGKDNTRACVSNITVRDVNMHNTMNGVRIKTWQGGSGSVQGIVFSNIQVSEVKLPIVIDQFYCDKRTCKNQSSAVSLEGINYERIRGTYTVKPVHFACSDFLPCVDVSLTSVELKPVQEQYHLYDPFCWQTYGELRTPTVPPIGCLQIGKPSSNRVQTDHDLC 526
BLAST of rna-XM_004489772.3 vs. UniProtKB/TrEMBL
Match: tr|I1KXE1|I1KXE1_SOYBN (Polygalacturonase OS=Glycine max OX=3847 GN=732602 PE=3 SV=1) HSP 1 Score: 875.544 bits (2261), Expect = 0.000e+0 Identity = 431/543 (79.37%), Postives = 478/543 (88.03%), Query Frame = 0
Query: 1 MSGLSLKGFTYMLLIAFLIWSSNFKCCIARRGKHWRQSISFSSSLYKKKGKSYSYGNDHKKNHHNGGSNSKPKSPPTHKSVPQLPNSPPPYKSIPISPPISKP-KYSPSTPPPKAY-------SIIFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHT---QTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPPIGCLQIGKPSNNRIQTDHDIC 532
MSGLS KGFTYM LIAFLIWS NF+ CIARRGKHWRQS S+SLYKKKGK+YS N H KNH GGS SKP P +HK P LP PP +K+ P P + P +P+TPPPK Y + FNVLD+GAKGDG +DDTKAF+ WA CKVE+STM+VPADYVF+VGPISFSGPYCKP+IVFQLDGTI+APT+PNAW +LQW+EF+KL GITIQGNG+IDGRGS+WWQD PYD+PIDDEEKLIVPLNHT +PPLP+Q+EMG KMPS KPTALRFYGS+ PTVTGITIQNSPQCHLKFD+CNGV+VH+V+ISSPGDSPNTDGIHLQNSKDVLI+ S +ACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVN+HN+MNGVRIKTWQGGSGSVQGVLFSN+QVSEV+LPIVIDQFYCDKRTC N TSAV+LAGINYERI+GTYTVKPVHFACSDSLPCVDVSLT+VELKPIQEKYHL +PFCWQT+GEL+TPTVPPI CLQIGKP+NNRIQTDHD+C
Sbjct: 1 MSGLSFKGFTYMFLIAFLIWSFNFEACIARRGKHWRQSRDVSASLYKKKGKNYS--NAHNKNH-GGGSKSKP--PSSHKGTPTLPKPPPQHKNTPSPPYPTPPSDDTPTTPPPKGYNGGGHSPTTTFNVLDFGAKGDGKSDDTKAFQEAWAEACKVESSTMLVPADYVFFVGPISFSGPYCKPSIVFQLDGTIVAPTSPNAWGKGLLQWLEFSKLVGITIQGNGIIDGRGSVWWQDNPYDDPIDDEEKLIVPLNHTIGSPSPPLPIQSEMGGKMPSVKPTALRFYGSFNPTVTGITIQNSPQCHLKFDSCNGVMVHNVTISSPGDSPNTDGIHLQNSKDVLIYGSTMACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVELPIVIDQFYCDKRTCKNQTSAVSLAGINYERIRGTYTVKPVHFACSDSLPCVDVSLTSVELKPIQEKYHLYNPFCWQTYGELKTPTVPPIDCLQIGKPTNNRIQTDHDLC 538
BLAST of rna-XM_004489772.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2R4H5|A0A0B2R4H5_GLYSO (Polygalacturonase OS=Glycine soja OX=3848 GN=D0Y65_021952 PE=3 SV=1) HSP 1 Score: 875.544 bits (2261), Expect = 0.000e+0 Identity = 431/543 (79.37%), Postives = 478/543 (88.03%), Query Frame = 0
Query: 1 MSGLSLKGFTYMLLIAFLIWSSNFKCCIARRGKHWRQSISFSSSLYKKKGKSYSYGNDHKKNHHNGGSNSKPKSPPTHKSVPQLPNSPPPYKSIPISPPISKP-KYSPSTPPPKAY-------SIIFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHT---QTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPPIGCLQIGKPSNNRIQTDHDIC 532
MSGLS KGFTYM LIAFLIWS NF+ CIARRGKHWRQS S+SLYKKKGK+YS N H KNH GGS SKP P +HK P LP PP +K+ P P + P +P+TPPPK Y + FNVLD+GAKGDG +DDTKAF+ WA CKVE+STM+VPADYVF+VGPISFSGPYCKP+IVFQLDGTI+APT+PNAW +LQW+EF+KL GITIQGNG+IDGRGS+WWQD PYD+PIDDEEKLIVPLNHT +PPLP+Q+EMG KMPS KPTALRFYGS+ PTVTGITIQNSPQCHLKFD+CNGV+VH+V+ISSPGDSPNTDGIHLQNSKDVLI+ S +ACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVN+HN+MNGVRIKTWQGGSGSVQGVLFSN+QVSEV+LPIVIDQFYCDKRTC N TSAV+LAGINYERI+GTYTVKPVHFACSDSLPCVDVSLT+VELKPIQEKYHL +PFCWQT+GEL+TPTVPPI CLQIGKP+NNRIQTDHD+C
Sbjct: 1 MSGLSFKGFTYMFLIAFLIWSFNFEACIARRGKHWRQSRDVSASLYKKKGKNYS--NAHNKNH-GGGSKSKP--PSSHKGTPTLPKPPPQHKNTPSPPYPTPPSDDTPTTPPPKGYNGGGHSPTTTFNVLDFGAKGDGKSDDTKAFQEAWAEACKVESSTMLVPADYVFFVGPISFSGPYCKPSIVFQLDGTIVAPTSPNAWGKGLLQWLEFSKLVGITIQGNGIIDGRGSVWWQDNPYDDPIDDEEKLIVPLNHTIGSPSPPLPIQSEMGGKMPSVKPTALRFYGSFNPTVTGITIQNSPQCHLKFDSCNGVMVHNVTISSPGDSPNTDGIHLQNSKDVLIYGSTMACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVELPIVIDQFYCDKRTCKNQTSAVSLAGINYERIRGTYTVKPVHFACSDSLPCVDVSLTSVELKPIQEKYHLYNPFCWQTYGELKTPTVPPIDCLQIGKPTNNRIQTDHDLC 538
BLAST of rna-XM_004489772.3 vs. UniProtKB/TrEMBL
Match: tr|I1N1I1|I1N1I1_SOYBN (Polygalacturonase OS=Glycine max OX=3847 GN=100783813 PE=3 SV=1) HSP 1 Score: 873.618 bits (2256), Expect = 0.000e+0 Identity = 426/543 (78.45%), Postives = 478/543 (88.03%), Query Frame = 0
Query: 1 MSGLSLKGFTYMLLIAFLIWSSNFKCCIARRGKHWRQSISFSSSLYKKKGKSYSYGNDHKKNHHNGGSNSKPKSPPTHKSVPQLPNSPPPYKSIPISPPISKP-KYSPSTPPPKAY-------SIIFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHT---QTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPPIGCLQIGKPSNNRIQTDHDIC 532
MSGLS +GFTYMLLIAFLIWS NF+ CIARRGKHWRQS S+S+YKKKGK+Y GN H K +H GGS SKP P +HK P LP PP +K+ P P + P +P+TPPPKAY + FNVLD+GAKGDG +DDTKAF+ WA CK+E+STM+VPADY F+VGPISFSGPYCKP+IVFQLDGTI+APT+P AW +LQW+EF+KL GITIQGNG+IDGRGS+WWQD YD+PIDDEEKLIVPLNHT +PPLP+Q+EMG KMPS KPTALRFYGS+ PTVTGITIQNSPQCHLKFDNCNGV+VHDV+ISSPGDSPNTDGIHLQNSKDVLI+SS +ACGDDCISIQTGCSN+YVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVN+HN+MNGVRIKTWQGGSGSVQGVLFSN+QVSEV+LPIVIDQFYCDKRTC N TSAV+LAGINYERI+GTYTVKPVHFACSD+LPCVDVSLT+VELKPIQE+YHL +PFCWQT+GEL+TPTVPPI CLQIGKP+NNRIQTDHD+C
Sbjct: 1 MSGLSFRGFTYMLLIAFLIWSFNFEACIARRGKHWRQSRDVSASVYKKKGKNY--GNAHNK-YHGGGSKSKP--PSSHKGTPTLPKPPPQHKNTPSPPYPTPPSDDTPTTPPPKAYNGGGHSSATTFNVLDFGAKGDGKSDDTKAFQEAWAEACKIESSTMLVPADYAFFVGPISFSGPYCKPSIVFQLDGTIVAPTSPKAWGKGLLQWLEFSKLVGITIQGNGIIDGRGSVWWQDNQYDDPIDDEEKLIVPLNHTVGSPSPPLPIQSEMGGKMPSVKPTALRFYGSFNPTVTGITIQNSPQCHLKFDNCNGVMVHDVTISSPGDSPNTDGIHLQNSKDVLIYSSSMACGDDCISIQTGCSNIYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVELPIVIDQFYCDKRTCKNQTSAVSLAGINYERIRGTYTVKPVHFACSDNLPCVDVSLTSVELKPIQEQYHLYNPFCWQTYGELKTPTVPPIDCLQIGKPTNNRIQTDHDLC 538
BLAST of rna-XM_004489772.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2QTT2|A0A0B2QTT2_GLYSO (Polygalacturonase OS=Glycine soja OX=3848 GN=D0Y65_048423 PE=3 SV=1) HSP 1 Score: 873.618 bits (2256), Expect = 0.000e+0 Identity = 426/543 (78.45%), Postives = 478/543 (88.03%), Query Frame = 0
Query: 1 MSGLSLKGFTYMLLIAFLIWSSNFKCCIARRGKHWRQSISFSSSLYKKKGKSYSYGNDHKKNHHNGGSNSKPKSPPTHKSVPQLPNSPPPYKSIPISPPISKP-KYSPSTPPPKAY-------SIIFNVLDYGAKGDGNTDDTKAFEATWAATCKVEASTMVVPADYVFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWSGVMLQWIEFTKLDGITIQGNGVIDGRGSIWWQDFPYDNPIDDEEKLIVPLNHT---QTPPLPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNVQVSEVQLPIVIDQFYCDKRTCTNHTSAVALAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPIQEKYHLDDPFCWQTFGELRTPTVPPIGCLQIGKPSNNRIQTDHDIC 532
MSGLS +GFTYMLLIAFLIWS NF+ CIARRGKHWRQS S+S+YKKKGK+Y GN H K +H GGS SKP P +HK P LP PP +K+ P P + P +P+TPPPKAY + FNVLD+GAKGDG +DDTKAF+ WA CK+E+STM+VPADY F+VGPISFSGPYCKP+IVFQLDGTI+APT+P AW +LQW+EF+KL GITIQGNG+IDGRGS+WWQD YD+PIDDEEKLIVPLNHT +PPLP+Q+EMG KMPS KPTALRFYGS+ PTVTGITIQNSPQCHLKFDNCNGV+VHDV+ISSPGDSPNTDGIHLQNSKDVLI+SS +ACGDDCISIQTGCSN+YVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVN+HN+MNGVRIKTWQGGSGSVQGVLFSN+QVSEV+LPIVIDQFYCDKRTC N TSAV+LAGINYERI+GTYTVKPVHFACSD+LPCVDVSLT+VELKPIQE+YHL +PFCWQT+GEL+TPTVPPI CLQIGKP+NNRIQTDHD+C
Sbjct: 1 MSGLSFRGFTYMLLIAFLIWSFNFEACIARRGKHWRQSRDVSASVYKKKGKNY--GNAHNK-YHGGGSKSKP--PSSHKGTPTLPKPPPQHKNTPSPPYPTPPSDDTPTTPPPKAYNGGGHSSATTFNVLDFGAKGDGKSDDTKAFQEAWAEACKIESSTMLVPADYAFFVGPISFSGPYCKPSIVFQLDGTIVAPTSPKAWGKGLLQWLEFSKLVGITIQGNGIIDGRGSVWWQDNQYDDPIDDEEKLIVPLNHTVGSPSPPLPIQSEMGGKMPSVKPTALRFYGSFNPTVTGITIQNSPQCHLKFDNCNGVMVHDVTISSPGDSPNTDGIHLQNSKDVLIYSSSMACGDDCISIQTGCSNIYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVELPIVIDQFYCDKRTCKNQTSAVSLAGINYERIRGTYTVKPVHFACSDNLPCVDVSLTSVELKPIQEQYHLYNPFCWQTYGELKTPTVPPIDCLQIGKPTNNRIQTDHDLC 538 The following BLAST results are available for this feature:
BLAST of rna-XM_004489772.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11) Total hits: 10
BLAST of rna-XM_004489772.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot) Total hits: 10
BLAST of rna-XM_004489772.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_004489772.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004489772.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004489772.3; organism=Cicer arietinum; type=mRNA; length=1599bpback to top protein sequence of rna-XM_004489772.3_CaCDCfrontier-NCBI_v1 >rna-XM_004489772.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004489772.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004489772.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=532bpback to top mRNA from alignment at chr2:8325125..8330754+ Legend: mRNAexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_004489772.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004489772.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004489772.3; organism=Cicer arietinum; type=mRNA; length=5630bp; location=Sequence derived from: chr2:8325125..8330754+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at chr2:8325125..8330754+ >rna-XM_004489772.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004489772.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004489772.3; organism=Cicer arietinum; type=CDS; length=1599bp; location=Sequence derived from: chr2:8325125..8330754+ (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|