rna-XM_004494336.3

Transcript Overview
Namerna-XM_004494336.3
Unique Namerna-XM_004494336.3_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length921
Productuncharacterized LOC101491431, transcript variant X2
References
External references for this mRNA
DatabaseAccession
GeneID101491431
GenBankXM_004494336.3
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr3chromosomechr3:36609563..36611001 -Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cacanL081Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cacanL121Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cacanL125Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascanL430Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ancanL0568Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0615Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0755Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0760Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cancanR089Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cancanR095Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanL0244Cicer arietinum ICC 4958 genome v2Cicer arietinum
canccR0286Cajanus cajan Asha genome v1.0Cajanus cajan
canccR0302Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR229Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR274Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR282Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canpvR176Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvrvR176Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR170Vicia faba cv. Tiffany genome v1.0Vicia faba
canvfhR176Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvrvR212Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR183Vicia faba cv. Tiffany genome v1.0Vicia faba
canpvR228Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canpvR232Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvfhR192Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvuaR134Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR143Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR150Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR175Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR188Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR185Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR197Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canpsR194Pisum sativum Cameor genome v1aPisum sativum
canpsR223Pisum sativum Cameor genome v1aPisum sativum
canpsR238Pisum sativum Cameor genome v1aPisum sativum
avjcanL298Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL396Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR133Cicer arietinum
cancarR156Cicer arietinum
cancarR160Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101491431gene-LOC101491431_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_004494336.3_CaCDCfrontier-NCBI_v1rna-XM_004494336.3_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_004494336.3_CaCDCfrontier-NCBI_v1rna-XM_004494336.3_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_004494336.3-3exon-XM_004494336.3-3_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004494336.3-2exon-XM_004494336.3-2_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004494336.3-1exon-XM_004494336.3-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_004494393.1cds-XP_004494393.1_CaCDCfrontier-NCBI_v1_3Cicer arietinumCDS
cds-XP_004494393.1cds-XP_004494393.1_CaCDCfrontier-NCBI_v1_2Cicer arietinumCDS
cds-XP_004494393.1cds-XP_004494393.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS


Homology
BLAST of rna-XM_004494336.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XTQ1|A0A1S2XTQ1_CICAR (Uncharacterized protein LOC101491431 isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101491431 PE=4 SV=1)

HSP 1 Score: 630.943 bits (1626), Expect = 0.000e+0
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0
Query:    1 MEDEKTNRHGKKKMHHSLGTLTIGGEGGITGLLVFGGALAIAGFMAVTSFATQRTKKKAIHPYQPIPQHLLLDDDQDIQYSTTQVEEDVTSCLTSNVCTNTVSSSELPSVQSLIPEEKIDNEPNSACFHHQEIAFSDYSLPESATSSNENAVAEECSMSLFNNSTDHEQDEEKDESQDGLTSTETEVKDDDDVTETDEEDSSDLDHNEELIEHEFKNYYCESHVCSDLYSDGSYYAENEKAMTVPKEAIFNRTSNFSLVQNDQPSIFTTWIMPMMLLGLLMILVLLTSGLQESLYILDDGDSIIVP 306
            MEDEKTNRHGKKKMHHSLGTLTIGGEGGITGLLVFGGALAIAGFMAVTSFATQRTKKKAIHPYQPIPQHLLLDDDQDIQYSTTQVEEDVTSCLTSNVCTNTVSSSELPSVQSLIPEEKIDNEPNSACFHHQEIAFSDYSLPESATSSNENAVAEECSMSLFNNSTDHEQDEEKDESQDGLTSTETEVKDDDDVTETDEEDSSDLDHNEELIEHEFKNYYCESHVCSDLYSDGSYYAENEKAMTVPKEAIFNRTSNFSLVQNDQPSIFTTWIMPMMLLGLLMILVLLTSGLQESLYILDDGDSIIVP
Sbjct:    1 MEDEKTNRHGKKKMHHSLGTLTIGGEGGITGLLVFGGALAIAGFMAVTSFATQRTKKKAIHPYQPIPQHLLLDDDQDIQYSTTQVEEDVTSCLTSNVCTNTVSSSELPSVQSLIPEEKIDNEPNSACFHHQEIAFSDYSLPESATSSNENAVAEECSMSLFNNSTDHEQDEEKDESQDGLTSTETEVKDDDDVTETDEEDSSDLDHNEELIEHEFKNYYCESHVCSDLYSDGSYYAENEKAMTVPKEAIFNRTSNFSLVQNDQPSIFTTWIMPMMLLGLLMILVLLTSGLQESLYILDDGDSIIVP 306          
BLAST of rna-XM_004494336.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XTV6|A0A1S2XTV6_CICAR (Uncharacterized protein LOC101491431 isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101491431 PE=4 SV=1)

HSP 1 Score: 625.165 bits (1611), Expect = 0.000e+0
Identity = 306/309 (99.03%), Postives = 306/309 (99.03%), Query Frame = 0
Query:    1 MEDEKTNRHGKKKMHHSLGTLTIGGEGGITGLLVFGGALAIAGFMAVTSFATQRTKKKAIHPYQPIPQHLLLDDDQDIQYSTTQVEEDVTSC---LTSNVCTNTVSSSELPSVQSLIPEEKIDNEPNSACFHHQEIAFSDYSLPESATSSNENAVAEECSMSLFNNSTDHEQDEEKDESQDGLTSTETEVKDDDDVTETDEEDSSDLDHNEELIEHEFKNYYCESHVCSDLYSDGSYYAENEKAMTVPKEAIFNRTSNFSLVQNDQPSIFTTWIMPMMLLGLLMILVLLTSGLQESLYILDDGDSIIVP 306
            MEDEKTNRHGKKKMHHSLGTLTIGGEGGITGLLVFGGALAIAGFMAVTSFATQRTKKKAIHPYQPIPQHLLLDDDQDIQYSTTQVEEDVTSC   LTSNVCTNTVSSSELPSVQSLIPEEKIDNEPNSACFHHQEIAFSDYSLPESATSSNENAVAEECSMSLFNNSTDHEQDEEKDESQDGLTSTETEVKDDDDVTETDEEDSSDLDHNEELIEHEFKNYYCESHVCSDLYSDGSYYAENEKAMTVPKEAIFNRTSNFSLVQNDQPSIFTTWIMPMMLLGLLMILVLLTSGLQESLYILDDGDSIIVP
Sbjct:    1 MEDEKTNRHGKKKMHHSLGTLTIGGEGGITGLLVFGGALAIAGFMAVTSFATQRTKKKAIHPYQPIPQHLLLDDDQDIQYSTTQVEEDVTSCCSCLTSNVCTNTVSSSELPSVQSLIPEEKIDNEPNSACFHHQEIAFSDYSLPESATSSNENAVAEECSMSLFNNSTDHEQDEEKDESQDGLTSTETEVKDDDDVTETDEEDSSDLDHNEELIEHEFKNYYCESHVCSDLYSDGSYYAENEKAMTVPKEAIFNRTSNFSLVQNDQPSIFTTWIMPMMLLGLLMILVLLTSGLQESLYILDDGDSIIVP 309          
BLAST of rna-XM_004494336.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NTU5|A0A2K3NTU5_TRIPR (Transmembrane protein OS=Trifolium pratense OX=57577 GN=L195_g002925 PE=4 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 6.062e-99
Identity = 201/320 (62.81%), Postives = 236/320 (73.75%), Query Frame = 0
Query:    1 MEDEKTNRHGKKKMHHSLGTLTIGGEGGITGLLVFGGALAIAGFMAVTSFATQRTKKKAIHPYQPIPQHLLLDDDQD--IQYSTTQVEEDVTSCLTSNVCTNTVSSSELPSVQSLIPEEKIDNEPNSACFHHQEIAFSDYSLPESATSSNENAVAEECSMSLFNNSTDHEQDEE-KDESQDGLTSTETEVKDDDDVT-----------ETDEEDSS------DLDHNEELIEHEFKNYYCESHVCSDLYSDGSYYAENEKAMTVPKEAIFNRTSNFSLVQNDQPSIFTTWIMPMMLLGLLMILVLLTSGLQESLYILDDG 300
            MEDEKTN+HGKKK + S+G++TIGGEGGITGL+VFGGALA+AGFMAVTSF  ++ K+KAIHP+    Q +LLD+D+D  + YSTTQ  EDVTSCL SN CT  VSSSEL   Q LI EEKIDNEPN+ACFH QEIAFSD+S PES TSSNEN VAEEC      ++ DHEQ EE KDESQD LT+TETE  DDDD             ETD+EDSS       LD  EELIE E+K YYCES++C            NE+ MTV KEA+ N+T+N S+VQNDQPSI  TW+MP+++LGLLMI+ LLT GLQESLY+LDDG
Sbjct:    2 MEDEKTNKHGKKKKNTSIGSITIGGEGGITGLIVFGGALALAGFMAVTSFGRKKHKRKAIHPHH---QQILLDEDKDSLVPYSTTQFGEDVTSCLASNECTKAVSSSEL---QPLIMEEKIDNEPNNACFHPQEIAFSDHSHPES-TSSNENGVAEEC-----QDTCDHEQKEEQKDESQDSLTTTETEDDDDDDDDDDDDDVDDDVMETDKEDSSITTGTTSLDEKEELIEQEYKKYYCESNLC------------NEEEMTVQKEALLNKTANLSVVQNDQPSILRTWVMPILMLGLLMIIALLTRGLQESLYVLDDG 297          
BLAST of rna-XM_004494336.3 vs. UniProtKB/TrEMBL
Match: tr|A0A072U4Z0|A0A072U4Z0_MEDTR (Transmembrane protein, putative OS=Medicago truncatula OX=3880 GN=25499617 PE=4 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 2.492e-91
Identity = 193/322 (59.94%), Postives = 232/322 (72.05%), Query Frame = 0
Query:    1 MEDEKT-NRHGKKKMHHSLGTLTIGGEGGITGLLVFGGALAIAGFMAVTSFATQRTKKKAI-HPYQPIPQHLLLDDDQDIQYSTTQVEEDVTSCLTSNVCTNTVSSSELPSVQSLIPEEKIDNEPNSACFHHQEIAFSDYSLPESATSSNENAVAEECSMSLFNNSTDHEQDEEKDESQDGLTSTETEVKDDD-------------------DVTETDEEDSSDLDHNEELIEHEFKNYYCESHVCSDLYS-DGSYYAENEKAMTVPKEAIFNRTSNFSLVQNDQPSIFTTWIMPMMLLGLLMILVLLTSGLQESLYILDDG 300
            MEDEKT N+HGKKK+H SLG++TIGGEGGITGLLVFGGALAIAGFMAVTSF +++ KKK I HP+    Q LL DD   +Q ST+Q+EED TSCLTSN CT T+SS EL S Q LI E KI+NEP++ CFHHQEIAFSD+S PESA+SSNENAVAEE S            +EEKDE ++GLT+TETE +  D                   D   +   +++ LD  E LIE EFK YYCES+VCSDLY+ DGS Y  NE A  V KEAI N T+NF+++Q +QPSI T+W+MPM++LGLLM+LVLLT GLQESL +LDD 
Sbjct:    1 MEDEKTTNKHGKKKIHTSLGSITIGGEGGITGLLVFGGALAIAGFMAVTSFGSKQHKKKPIIHPHHQ--QLLLADDKHSLQNSTSQLEEDATSCLTSNECTKTISSFELLSEQPLILEGKINNEPSNTCFHHQEIAFSDHSHPESASSSNENAVAEESS-----------GEEEKDEPREGLTTTETEDEPQDDITTTETENTDDDDDVTYTDEDTSKATETTSLDDKEGLIEQEFKKYYCESNVCSDLYANDGSRYVGNEDA--VQKEAILNETANFTMLQKEQPSILTSWVMPMLMLGLLMLLVLLTRGLQESLNVLDDA 307          
BLAST of rna-XM_004494336.3 vs. UniProtKB/TrEMBL
Match: tr|A0A396H8W9|A0A396H8W9_MEDTR (Transmembrane protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr7g0269601 PE=4 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 1.618e-83
Identity = 193/358 (53.91%), Postives = 232/358 (64.80%), Query Frame = 0
Query:    1 MEDEKT-NRHGKKKMHHSLGTLTIGGEGGITGLLVFGGALAIAGFMAVTSFATQRTKKKA-IHPYQPIPQHLLLDDDQDIQYSTTQVEEDVTS------------------------------------CLTSNVCTNTVSSSELPSVQSLIPEEKIDNEPNSACFHHQEIAFSDYSLPESATSSNENAVAEECSMSLFNNSTDHEQDEEKDESQDGLTSTETEVKDDD-------------------DVTETDEEDSSDLDHNEELIEHEFKNYYCESHVCSDLYS-DGSYYAENEKAMTVPKEAIFNRTSNFSLVQNDQPSIFTTWIMPMMLLGLLMILVLLTSGLQESLYILDDG 300
            MEDEKT N+HGKKK+H SLG++TIGGEGGITGLLVFGGALAIAGFMAVTSF +++ KKK  IHP+    Q LL DD   +Q ST+Q+EED TS                                    CLTSN CT T+SS EL S Q LI E KI+NEP++ CFHHQEIAFSD+S PESA+SSNENAVAEE S            +EEKDE ++GLT+TETE +  D                   D   +   +++ LD  E LIE EFK YYCES+VCSDLY+ DGS Y  NE A  V KEAI N T+NF+++Q +QPSI T+W+MPM++LGLLM+LVLLT GLQESL +LDD 
Sbjct:    1 MEDEKTTNKHGKKKIHTSLGSITIGGEGGITGLLVFGGALAIAGFMAVTSFGSKQHKKKPIIHPHH--QQLLLADDKHSLQNSTSQLEEDATSYDRHCSYAANLYAVIAVADSDLKHSFINNYVLPFVICLTSNECTKTISSFELLSEQPLILEGKINNEPSNTCFHHQEIAFSDHSHPESASSSNENAVAEESS-----------GEEEKDEPREGLTTTETEDEPQDDITTTETENTDDDDDVTYTDEDTSKATETTSLDDKEGLIEQEFKKYYCESNVCSDLYANDGSRYVGNEDA--VQKEAILNETANFTMLQKEQPSILTSWVMPMLMLGLLMLLVLLTRGLQESLNVLDDA 343          
BLAST of rna-XM_004494336.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8KZQ9|A0A8B8KZQ9_ABRPR (Histone-lysine N-methyltransferase SETD1B-like OS=Abrus precatorius OX=3816 GN=LOC113861009 PE=4 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 7.745e-67
Identity = 156/355 (43.94%), Postives = 214/355 (60.28%), Query Frame = 0
Query:    1 MEDEK---TNRHGKKKMHHSLGTLTIGGEGGITGLLVFGGALAIAGFMAVTSFATQRTKKKAIHPYQPIP--QHLLLD-------DDQDI--------QYSTTQVEEDVTSCLTSNVCTNTVSSSELPSVQSLIPEEKIDNEPNSA-----CFHHQEIAFSDYSLPESATSSNENAVAEECSMSLFNNSTDHEQDEEKDESQDGLTSTETEVKDDDDV-------------TETDEEDSSD--------LDHNEELIEH---EFKNYYCESHVCSDLYSDGSYYAENEKAMTVPKEAIFNRTSNFSLVQNDQPSIFTTWIMPMMLLGLLMILVLLTSGLQESLYILDDGDSIIVP 306
            MED++   TN+ GKKK+H  L +L+IGGEGGI GLLVFGGALAIAGFMAV SFA+++ K K  H +QP P  QH+LLD       +D +I        Q+ST    ED T C TSN              +S+  EEKI+ +P+S       F  Q+  FSD S PE+A SSN++ VAEEC M L +NS+   Q+ EKDE++DGLTS+ETE  D+++              +E  EEDSS         L++N+E + H   +FK  YC+S VC+D   D + Y  +++A+ V KEA  N    FS+V N + SI  +W+ P++LL L+++LVLLT   QES Y+LDD +S++VP
Sbjct:    1 MEDKRITITNKRGKKKIH-PLSSLSIGGEGGIVGLLVFGGALAIAGFMAVASFASKKRKGKGTHDHQPKPKQQHILLDQNGCKSEEDHEITQTLTSLLQHSTIH-HEDATCCWTSN--------------KSIDQEEKIELKPSSVEESPTHFKDQQTVFSDNSHPENAVSSNQSGVAEECLMPLLHNSSGQAQEVEKDEARDGLTSSETEDDDNEEDVDDDDDDMMSDNVSEIGEEDSSKEIATTSLSLNYNKEQVWHADRKFKGEYCDSQVCNDSDEDDTDYGGDDEAVIVGKEASLNEKVKFSMVANSEASIIRSWVFPLLLLALVLLLVLLTRRPQESFYVLDDSNSVLVP 339          
BLAST of rna-XM_004494336.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4XRX0|A0A9D4XRX0_PEA (Uncharacterized protein OS=Pisum sativum OX=3888 GN=KIW84_030951 PE=4 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 2.270e-59
Identity = 135/191 (70.68%), Postives = 151/191 (79.06%), Query Frame = 0
Query:    1 MEDEKTNRHGKKKMHHSLG-TLTIGGEGGITGLLVFGGALAIAGFMAVTSFATQRTKKKAIHPYQPIPQHLLLDDDQD-IQYSTTQVEEDVTSCLTSNVCTNTVSSSELPSVQSLIPEEKIDNEPNSACFHHQEIAFSDYSLPESATSS---NENAVAEECSMSLFNNSTDHEQDEEKDESQDGL-TSTET 185
            MEDE+TNR  K+K + SLG +LTIGGEGGITGLLVFGGALAIAGFMAVTSF T++ KKK+IHP+Q   Q+LL DD++D +QYSTTQ  EDVTSCL SN C  T  SSEL   Q L  EEKIDNEPNS CFHHQEIAFSDYS PESATSS   NEN VAEE S  +FNNS D EQ+E+KDES+D L T TET
Sbjct:    1 MEDERTNRDRKRKTNTSLGRSLTIGGEGGITGLLVFGGALAIAGFMAVTSFGTKKHKKKSIHPHQ--QQYLLDDDEKDSLQYSTTQFGEDVTSCLASNECAKTDDSSEL---QPLTLEEKIDNEPNSDCFHHQEIAFSDYSQPESATSSNENNENMVAEESS-RMFNNSGDCEQEEKKDESEDSLITFTET 185          

HSP 2 Score: 133.265 bits (334), Expect = 2.704e-32
Identity = 61/108 (56.48%), Postives = 83/108 (76.85%), Query Frame = 0
Query:  200 DSSDLDHNEELIEHEFKNYYCESHVCSDLYSD-GSYYAENEKAMTVPKEAIFNRTSNFSLVQNDQPSIFTTWIMPMMLLGLLMILVLLTSGLQESLYILDDGDSIIVP 306
            +++ LD NEELI+H++K YYCE   CS+LY+D GSYYA N+   T PKEA++N+T++F +  N QPSI  TWI+P+++LG LM+L  LT GL ESLY+LDD DS+ VP
Sbjct:  267 ETTSLDDNEELIQHKYKKYYCECDECSNLYADDGSYYALNK---TAPKEAMWNKTASFPVALNVQPSILATWILPVLMLGFLMLLAALTCGLLESLYVLDDDDSVRVP 371          
BLAST of rna-XM_004494336.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445LF91|A0A445LF91_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_007849 PE=4 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 8.117e-57
Identity = 155/355 (43.66%), Postives = 198/355 (55.77%), Query Frame = 0
Query:    1 MEDEKT---NRHGKKKMHHSLGTLTIGGEGGITGLLVFGGALAIAGFMAVTSFATQRTKKKAIH------------PYQPIPQHLLL-DDDQDIQYSTTQVEE--DVTSCLTSNVCTNTVS-SSELPSVQSLIPEEK-------IDNEPNSACFHHQEIAFSDYSLPESATSSNENAVAEECSMSLFNNSTDHEQDEEKDESQDGLTSTETEV----------------KDDDDVTETDEEDSSDLDHN---------EELIEHEFKNYYCESHVCSDLYSDGSYYAENEKAMTVPKEAIFNRTSNFSLVQNDQPSIFTTWIMPMMLLGLLMILVLLTSGLQESLYILDDGDSII 304
            MED++T   N   +KK+H  + +L+IGGEGGI GL+VFGGALAIAGFMAV SFA+ + K K  H                + +H+   ++D D   S T + +  D T C  SN+    VS SSE  SVQSLI EEK       ++  P    FHHQEI FSD S PESA SSNE  VAEEC MSL N+ +   QDEE    QD  TS+ETE                    DDV+E  E+D S +            EELI+H  + +  +SHVCSD   DGS    +E  MTV  +A  N+  NF +V N+QP   TTW+ P +LL LL+ILVLLT   QES Y+LD+G +++
Sbjct:    1 MEDKRTAITNNQARKKIHPLIRSLSIGGEGGIAGLVVFGGALAIAGFMAVASFASNKNKAKDTHDDHQPPKPKPKPQQLLLEEHICKSEEDHDTTQSLTSLIQHGDSTCCWASNMSKTQVSDSSESLSVQSLILEEKNELKARSVEESPTD--FHHQEIVFSDSSHPESAASSNEGGVAEECMMSLLNSPSG--QDEEP---QDDSTSSETETVTEDDDIKDDDDDDDEMLSDDVSEIGEQDGSKVATGTTSMEPVWPEELIQHAKQKFKGDSHVCSDSEVDGSDDL-DEAMMTVANQATMNQNLNFFMVPNNQP--LTTWVFPFLLLALLLILVLLTRRPQESFYVLDEGTTVV 345          
BLAST of rna-XM_004494336.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0KN08|A0A0R0KN08_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_03G216500 PE=4 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 5.160e-56
Identity = 155/355 (43.66%), Postives = 198/355 (55.77%), Query Frame = 0
Query:    1 MEDEKT---NRHGKKKMHHSLGTLTIGGEGGITGLLVFGGALAIAGFMAVTSFATQRTKKKAIH------------PYQPIPQHLLL-DDDQDIQYSTTQVEE--DVTSCLTSNVCTNTVS-SSELPSVQSLIPEEK-------IDNEPNSACFHHQEIAFSDYSLPESATSSNENAVAEECSMSLFNNSTDHEQDEEKDESQDGLTSTETEV----------------KDDDDVTETDEEDSSDLDHN---------EELIEHEFKNYYCESHVCSDLYSDGSYYAENEKAMTVPKEAIFNRTSNFSLVQNDQPSIFTTWIMPMMLLGLLMILVLLTSGLQESLYILDDGDSII 304
            MED++T   N   +KK+H  + +L+IGGEGGI GL+VFGGALAIAGFMAV SFA+ + K K  H                + +H+   ++D D   S T + +  D T C  SN+    VS SSE  SVQSLI EEK       ++  P    FHHQEI FSD S PESA SSNE  VAEEC MSL N+ +   QDE   E QD  TS+ETE                    DDV+E  E+D S +            EELI+H  + +  +SHVCSD   DGS   + E  MTV  +A  N+  NF +V N+QP   TTW+ P +LL LL+ILVLLT   QES Y+LD+G +++
Sbjct:   53 MEDKRTAITNNQARKKIHPLIRSLSIGGEGGIAGLVVFGGALAIAGFMAVASFASNKNKAKDTHDDHQPPKPKPKPQQLLLEEHICKSEEDHDTTQSLTSLIQHGDSTCCWASNMSKTQVSDSSESLSVQSLILEEKNELKARSVEESPTD--FHHQEIVFSDSSHPESAASSNEGGVAEECMMSLLNSPSG--QDE---EPQDDSTSSETETVTEDDDIKDDDDDDDEMLSDDVSEIGEQDGSKVATGTTSMEPVWPEELIQHAKQKFKGDSHVCSDSEVDGSDDLD-EAMMTVANQATMNQNLNFFMVPNNQP--LTTWVFPFLLLALLLILVLLTRRPQESFYVLDEGTTVV 397          
BLAST of rna-XM_004494336.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2QJK6|A0A0B2QJK6_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_039682 PE=4 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.512e-56
Identity = 154/355 (43.38%), Postives = 197/355 (55.49%), Query Frame = 0
Query:    1 MEDEKT---NRHGKKKMHHSLGTLTIGGEGGITGLLVFGGALAIAGFMAVTSFATQRTKKKAIH------------PYQPIPQHLLL-DDDQDIQYSTTQVEE--DVTSCLTSNVCTNTVS-SSELPSVQSLIPEEK-------IDNEPNSACFHHQEIAFSDYSLPESATSSNENAVAEECSMSLFNNSTDHEQDEEKDESQDGLTSTETEV----------------KDDDDVTETDEEDSSDLDHN---------EELIEHEFKNYYCESHVCSDLYSDGSYYAENEKAMTVPKEAIFNRTSNFSLVQNDQPSIFTTWIMPMMLLGLLMILVLLTSGLQESLYILDDGDSII 304
            MED++T   N   +KK+H  + +L+IGGEGGI GL+VFGGALAIAGFM V SFA+ + K K  H                + +H+   ++D D   S T + +  D T C  SN+    VS SSE  SVQSLI EEK       ++  P    FHHQEI FSD S PESA SSNE  VAEEC MSL N+ +   QDEE    QD  TS+ETE                    DDV+E  E+D S +            EELI+H  + +  +SHVCSD   DGS    +E  MTV  +A  N+  NF +V N+QP   TTW+ P +LL LL+ILVLLT   QES Y+LD+G +++
Sbjct:    1 MEDKRTAITNNQARKKIHPLIRSLSIGGEGGIVGLVVFGGALAIAGFMEVASFASNKNKAKDTHDDHQPPKPKPKPQQLLLEEHICKSEEDHDTTQSLTSLIQHGDSTCCWASNMSKTQVSDSSESLSVQSLILEEKNELKARSVEESPTD--FHHQEIVFSDSSHPESAASSNEGGVAEECMMSLLNSPSG--QDEEP---QDDSTSSETETVTEDDDIKDDDDDDDEMLSDDVSEIGEQDGSKVATGTTSMEPVWPEELIQHAKQKFKGDSHVCSDSEVDGSDDL-DEAMMTVANQATMNQNLNFFMVPNNQP--LTTWVFPFLLLALLLILVLLTRRPQESFYVLDEGTTVV 345          
The following BLAST results are available for this feature:
BLAST of rna-XM_004494336.3 vs.
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of rna-XM_004494336.3 vs.
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of rna-XM_004494336.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2XTQ1|A0A1S2XTQ1_CICAR0.000e+0100.00Uncharacterized protein LOC101491431 isoform X2 OS... [more]
tr|A0A1S2XTV6|A0A1S2XTV6_CICAR0.000e+099.03Uncharacterized protein LOC101491431 isoform X1 OS... [more]
tr|A0A2K3NTU5|A0A2K3NTU5_TRIPR6.062e-9962.81Transmembrane protein OS=Trifolium pratense OX=575... [more]
tr|A0A072U4Z0|A0A072U4Z0_MEDTR2.492e-9159.94Transmembrane protein, putative OS=Medicago trunca... [more]
tr|A0A396H8W9|A0A396H8W9_MEDTR1.618e-8353.91Transmembrane protein OS=Medicago truncatula OX=38... [more]
tr|A0A8B8KZQ9|A0A8B8KZQ9_ABRPR7.745e-6743.94Histone-lysine N-methyltransferase SETD1B-like OS=... [more]
tr|A0A9D4XRX0|A0A9D4XRX0_PEA2.270e-5970.68Uncharacterized protein OS=Pisum sativum OX=3888 G... [more]
tr|A0A445LF91|A0A445LF91_GLYSO8.117e-5743.66Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|A0A0R0KN08|A0A0R0KN08_SOYBN5.160e-5643.66Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A0B2QJK6|A0A0B2QJK6_GLYSO6.512e-5643.38Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
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Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_004494336.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004494336.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004494336.3; organism=Cicer arietinum; type=mRNA; length=921bp
ATGGAGGACGAAAAGACAAACAGGCATGGAAAGAAGAAAATGCATCATTC
TTTAGGCACCTTAACTATTGGTGGTGAAGGTGGGATTACAGGACTTCTTG
TGTTCGGTGGAGCATTGGCCATTGCTGGTTTTATGGCTGTCACCTCTTTT
GCGACCCAAAGAACTAAGAAAAAGGCCATTCATCCCTACCAACCTATACC
TCAACATTTATTATTGGATGACGATCAAGACATTCAATATTCAACAACCC
AAGTTGAGGAGGATGTCACATCCTGTTTGACATCCAATGTGTGTACCAAT
ACAGTTAGTTCCTCCGAGTTGCCCTCTGTCCAATCTTTGATTCCGGAAGA
GAAAATTGACAATGAACCCAATAGTGCGTGCTTTCACCATCAAGAAATTG
CCTTCTCTGACTATTCCCTCCCAGAAAGTGCAACATCCTCAAACGAAAAC
GCTGTTGCTGAAGAATGTTCGATGTCATTGTTTAACAACTCCACTGACCA
TGAACAAGACGAAGAGAAGGATGAATCTCAAGATGGCCTAACATCCACAG
AAACAGAGGTGAAGGACGACGATGATGTTACAGAGACCGATGAAGAAGAT
AGCTCAGACCTTGATCACAACGAGGAGCTGATAGAACATGAATTCAAGAA
TTACTACTGCGAAAGCCATGTCTGCAGTGACTTATATTCAGATGGTTCCT
ACTATGCTGAAAATGAGAAGGCCATGACAGTACCGAAAGAAGCAATTTTT
AACAGAACATCAAATTTCTCTCTGGTGCAGAATGATCAACCATCAATATT
TACAACCTGGATTATGCCCATGATGTTGTTAGGATTGCTAATGATCCTAG
TTTTGCTGACCAGTGGCCTACAGGAATCTCTTTATATCCTTGATGATGGC
GATTCTATAATAGTCCCATGA
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protein sequence of rna-XM_004494336.3_CaCDCfrontier-NCBI_v1

>rna-XM_004494336.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004494336.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004494336.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=306bp
MEDEKTNRHGKKKMHHSLGTLTIGGEGGITGLLVFGGALAIAGFMAVTSF
ATQRTKKKAIHPYQPIPQHLLLDDDQDIQYSTTQVEEDVTSCLTSNVCTN
TVSSSELPSVQSLIPEEKIDNEPNSACFHHQEIAFSDYSLPESATSSNEN
AVAEECSMSLFNNSTDHEQDEEKDESQDGLTSTETEVKDDDDVTETDEED
SSDLDHNEELIEHEFKNYYCESHVCSDLYSDGSYYAENEKAMTVPKEAIF
NRTSNFSLVQNDQPSIFTTWIMPMMLLGLLMILVLLTSGLQESLYILDDG
DSIIVP
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mRNA from alignment at chr3:36609563..36611001-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_004494336.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004494336.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004494336.3; organism=Cicer arietinum; type=mRNA; length=1439bp; location=Sequence derived from: chr3:36609563..36611001- (Cicer arietinum
ATCTCTTGGCTATTCTTCTATTACCAAGTACAAGAAAGGATATCATGGAG GACGAAAAGACAAACAGGCATGGAAAGAAGAAAATGCATCATTCTTTAGG CACCTTAACTATTGGTGGTGAAGGTGGGATTACAGGACTTCTTGTGTTCG GTGGAGCATTGGCCATTGCTGGTTTTATGGCTGTCACCTCTTTTGCGACC CAAAGAACTAAGAAAAAGGCCATTCATCCCTACCAACCTATACCTCAACA TTTATTATTGGATGACGATCAAGACATTCAATATTCAACAACCCAAGTTG AGGAGGATGTCACATCGTATGATATAACATTAGTATATATAAATAAATAT TTACACACATGTACACCTAAGTTTATTTGTTAATGTATAATTGATTGATT AATTAATTAATTAATTAATTAATTGTGTCAGTTGCTGCAGCTGTTTGACA TCCAATGTGTGTACCAATACAGTTAGTTCCTCCGAGTTGCCCTCTGTCCA ATCTTTGATTCCGGTAATTCGTGCTGCATGTTGGATTAATAGTGAGTTTG GAGGAATTACAGTGAGGAACGGTGATTTGATAAAAATTACTGTTGAATTT CAACATGATTGCATCAAACTCACCTCTCCAATCCACAGATGCAGTTCATC CTTCTTTATTCAATGCAGTTGGTTGTGTTTTAATTATATATATTGTCTTT AGTTAACTTGGATGTTGAATTTGGTTCAGGAAGAGAAAATTGACAATGAA CCCAATAGTGCGTGCTTTCACCATCAAGAAATTGCCTTCTCTGACTATTC CCTCCCAGAAAGTGCAACATCCTCAAACGAAAACGCTGTTGCTGAAGAAT GTTCGATGTCATTGTTTAACAACTCCACTGACCATGAACAAGACGAAGAG AAGGATGAATCTCAAGATGGCCTAACATCCACAGAAACAGAGGTGAAGGA CGACGATGATGTTACAGAGACCGATGAAGAAGATAGCTCAGACCTTGATC ACAACGAGGAGCTGATAGAACATGAATTCAAGAATTACTACTGCGAAAGC CATGTCTGCAGTGACTTATATTCAGATGGTTCCTACTATGCTGAAAATGA GAAGGCCATGACAGTACCGAAAGAAGCAATTTTTAACAGAACATCAAATT TCTCTCTGGTGCAGAATGATCAACCATCAATATTTACAACCTGGATTATG CCCATGATGTTGTTAGGATTGCTAATGATCCTAGTTTTGCTGACCAGTGG CCTACAGGAATCTCTTTATATCCTTGATGATGGCGATTCTATAATAGTCC CATGAAGTGAATTTAGGATCAATGTTTTGGTCTAAAAAGAAGAATCAATA TATAAAACATATATGTTCTGTTTTGTGAGTTAGTATCAATATATGTATTT GTTCTATTTCAATGAGTTTTGAAATGGACGTTGCTATAA
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Coding sequence (CDS) from alignment at chr3:36609563..36611001-

>rna-XM_004494336.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004494336.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004494336.3; organism=Cicer arietinum; type=CDS; length=921bp; location=Sequence derived from: chr3:36609563..36611001- (Cicer arietinum
ATGGAGGACGAAAAGACAAACAGGCATGGAAAGAAGAAAATGCATCATTC
TTTAGGCACCTTAACTATTGGTGGTGAAGGTGGGATTACAGGACTTCTTG
TGTTCGGTGGAGCATTGGCCATTGCTGGTTTTATGGCTGTCACCTCTTTT
GCGACCCAAAGAACTAAGAAAAAGGCCATTCATCCCTACCAACCTATACC
TCAACATTTATTATTGGATGACGATCAAGACATTCAATATTCAACAACCC
AAGTTGAGGAGGATGTCACATCCTGTTTGACATCCAATGTGTGTACCAAT
ACAGTTAGTTCCTCCGAGTTGCCCTCTGTCCAATCTTTGATTCCGGAAGA
GAAAATTGACAATGAACCCAATAGTGCGTGCTTTCACCATCAAGAAATTG
CCTTCTCTGACTATTCCCTCCCAGAAAGTGCAACATCCTCAAACGAAAAC
GCTGTTGCTGAAGAATGTTCGATGTCATTGTTTAACAACTCCACTGACCA
TGAACAAGACGAAGAGAAGGATGAATCTCAAGATGGCCTAACATCCACAG
AAACAGAGGTGAAGGACGACGATGATGTTACAGAGACCGATGAAGAAGAT
AGCTCAGACCTTGATCACAACGAGGAGCTGATAGAACATGAATTCAAGAA
TTACTACTGCGAAAGCCATGTCTGCAGTGACTTATATTCAGATGGTTCCT
ACTATGCTGAAAATGAGAAGGCCATGACAGTACCGAAAGAAGCAATTTTT
AACAGAACATCAAATTTCTCTCTGGTGCAGAATGATCAACCATCAATATT
TACAACCTGGATTATGCCCATGATGTTGTTAGGATTGCTAATGATCCTAG
TTTTGCTGACCAGTGGCCTACAGGAATCTCTTTATATCCTTGATGATGGC
GATTCTATAATAGTCCCATGA
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