rna-XM_004494780.3
|
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_004494780.3 vs. Araport11
Match: | (Symbols: DOF4.1, AtDOF4.1, ITD1 | DNA binding with one finger 4.1, INTERCELLULAR TRAFFICKING DOF 1 | chr4:403320-404204 REVERSE LENGTH=294) HSP 1 Score: 140.584 bits (353), Expect = 1.101e-40 Identity = 92/239 (38.49%), Postives = 115/239 (48.12%), Query Frame = 0
Query: 12 MSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKL-------------------------------ISSSSQNNIIKGHDLNLAF--PSMDKYPASMFSSTSGLINNSATNYVPNNSLMMMSSSDASGQEIKPTNLGFSL---ENRYSNSYEVQVQENVGTLLFPFGDMNQISTTHHVEVEHD----KEQGNSTGYNWNGVIGEGSS 210
M+ TR +E NCPRC SSNTKFCYYNNYSL QPRYLCK+C+RYWT+GGSLRN+PVGG SRKN KL S + QNN +DL+L+F P DK + S + N + + M+ E NLGFSL E N V E +++P+GD HH V HD K +G S+ W+G+I G S
Sbjct: 57 MTTMSTRPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKKLPFPNSSTSSSTKNLPDLNPPFVFTSSASSSNPSKTHQNN----NDLSLSFSSPMQDKRAQGHYGHFSEQVVTGGQNCLFQAPMGMIQFRQEYDHEHPKKNLGFSLDRNEEEIGNHDNFVVNEEGSKMMYPYGDHEDRQQHHH--VRHDDGNKKREGGSSNELWSGIILGGDS 289
BLAST of rna-XM_004494780.3 vs. Araport11
Match: | (Symbols: DOF4.1, AtDOF4.1, ITD1 | DNA binding with one finger 4.1, INTERCELLULAR TRAFFICKING DOF 1 | chr4:403320-404204 REVERSE LENGTH=294) HSP 1 Score: 140.584 bits (353), Expect = 1.101e-40 Identity = 92/239 (38.49%), Postives = 115/239 (48.12%), Query Frame = 0
Query: 12 MSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKL-------------------------------ISSSSQNNIIKGHDLNLAF--PSMDKYPASMFSSTSGLINNSATNYVPNNSLMMMSSSDASGQEIKPTNLGFSL---ENRYSNSYEVQVQENVGTLLFPFGDMNQISTTHHVEVEHD----KEQGNSTGYNWNGVIGEGSS 210
M+ TR +E NCPRC SSNTKFCYYNNYSL QPRYLCK+C+RYWT+GGSLRN+PVGG SRKN KL S + QNN +DL+L+F P DK + S + N + + M+ E NLGFSL E N V E +++P+GD HH V HD K +G S+ W+G+I G S
Sbjct: 57 MTTMSTRPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKKLPFPNSSTSSSTKNLPDLNPPFVFTSSASSSNPSKTHQNN----NDLSLSFSSPMQDKRAQGHYGHFSEQVVTGGQNCLFQAPMGMIQFRQEYDHEHPKKNLGFSLDRNEEEIGNHDNFVVNEEGSKMMYPYGDHEDRQQHHH--VRHDDGNKKREGGSSNELWSGIILGGDS 289
BLAST of rna-XM_004494780.3 vs. Araport11
Match: | (Symbols: DOF4.1, AtDOF4.1, ITD1 | DNA binding with one finger 4.1, INTERCELLULAR TRAFFICKING DOF 1 | chr4:403320-404204 REVERSE LENGTH=294) HSP 1 Score: 140.584 bits (353), Expect = 1.101e-40 Identity = 92/239 (38.49%), Postives = 115/239 (48.12%), Query Frame = 0
Query: 12 MSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKL-------------------------------ISSSSQNNIIKGHDLNLAF--PSMDKYPASMFSSTSGLINNSATNYVPNNSLMMMSSSDASGQEIKPTNLGFSL---ENRYSNSYEVQVQENVGTLLFPFGDMNQISTTHHVEVEHD----KEQGNSTGYNWNGVIGEGSS 210
M+ TR +E NCPRC SSNTKFCYYNNYSL QPRYLCK+C+RYWT+GGSLRN+PVGG SRKN KL S + QNN +DL+L+F P DK + S + N + + M+ E NLGFSL E N V E +++P+GD HH V HD K +G S+ W+G+I G S
Sbjct: 57 MTTMSTRPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKKLPFPNSSTSSSTKNLPDLNPPFVFTSSASSSNPSKTHQNN----NDLSLSFSSPMQDKRAQGHYGHFSEQVVTGGQNCLFQAPMGMIQFRQEYDHEHPKKNLGFSLDRNEEEIGNHDNFVVNEEGSKMMYPYGDHEDRQQHHH--VRHDDGNKKREGGSSNELWSGIILGGDS 289
BLAST of rna-XM_004494780.3 vs. Araport11
Match: | (Symbols: DAG1 | dof affecting germination 1 | chr3:22896212-22897150 FORWARD LENGTH=284) HSP 1 Score: 135.576 bits (340), Expect = 9.396e-39 Identity = 93/241 (38.59%), Postives = 128/241 (53.11%), Query Frame = 0
Query: 12 MSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKN------------------NKLISSSSQNNIIKGHDLN-LAFPSMDK--YPASMFSSTSGLINNSATNYVP-----NNSLMMMSSSDASGQEIKPT--NLGFSLENRYSNSYEV-----QVQEN------VGTLLFPFGDMNQISTTHHVEVEHDKEQGNSTGYNWNGVIGE--GSSW 211
M +K R +E++NCPRC S+NTKFCYYNNYSLTQPRY CK C+RYWT+GGSLRN+PVGGSSRKN N I SSQ DLN L+FP M + A ++G+ + ++P +NS++ S + + K + NL FS+++ + + Q+N +LFPF DM ++S+T +K GN+T WNG+ GSSW
Sbjct: 51 METRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSSTPLASPSNPKLPDLNPPILFSSQIPNKSNKDLNLLSFPVMQDHHHHALELLRSNGVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSIDHHQGIGHNTINSNQRAQDNNDDMNGASRVLFPFSDMKELSST-----TQEKSHGNNTY--WNGMFSNTGGSSW 284
BLAST of rna-XM_004494780.3 vs. Araport11
Match: | (Symbols: DAG1 | dof affecting germination 1 | chr3:22896212-22897150 FORWARD LENGTH=284) HSP 1 Score: 135.576 bits (340), Expect = 9.396e-39 Identity = 93/241 (38.59%), Postives = 128/241 (53.11%), Query Frame = 0
Query: 12 MSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKN------------------NKLISSSSQNNIIKGHDLN-LAFPSMDK--YPASMFSSTSGLINNSATNYVP-----NNSLMMMSSSDASGQEIKPT--NLGFSLENRYSNSYEV-----QVQEN------VGTLLFPFGDMNQISTTHHVEVEHDKEQGNSTGYNWNGVIGE--GSSW 211
M +K R +E++NCPRC S+NTKFCYYNNYSLTQPRY CK C+RYWT+GGSLRN+PVGGSSRKN N I SSQ DLN L+FP M + A ++G+ + ++P +NS++ S + + K + NL FS+++ + + Q+N +LFPF DM ++S+T +K GN+T WNG+ GSSW
Sbjct: 51 METRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSSTPLASPSNPKLPDLNPPILFSSQIPNKSNKDLNLLSFPVMQDHHHHALELLRSNGVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSIDHHQGIGHNTINSNQRAQDNNDDMNGASRVLFPFSDMKELSST-----TQEKSHGNNTY--WNGMFSNTGGSSW 284
BLAST of rna-XM_004494780.3 vs. Araport11
Match: | (Symbols: DAG1 | dof affecting germination 1 | chr3:22895495-22897150 FORWARD LENGTH=296) HSP 1 Score: 135.191 bits (339), Expect = 1.460e-38 Identity = 93/241 (38.59%), Postives = 128/241 (53.11%), Query Frame = 0
Query: 12 MSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKN------------------NKLISSSSQNNIIKGHDLN-LAFPSMDK--YPASMFSSTSGLINNSATNYVP-----NNSLMMMSSSDASGQEIKPT--NLGFSLENRYSNSYEV-----QVQEN------VGTLLFPFGDMNQISTTHHVEVEHDKEQGNSTGYNWNGVIGE--GSSW 211
M +K R +E++NCPRC S+NTKFCYYNNYSLTQPRY CK C+RYWT+GGSLRN+PVGGSSRKN N I SSQ DLN L+FP M + A ++G+ + ++P +NS++ S + + K + NL FS+++ + + Q+N +LFPF DM ++S+T +K GN+T WNG+ GSSW
Sbjct: 63 METRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSSTPLASPSNPKLPDLNPPILFSSQIPNKSNKDLNLLSFPVMQDHHHHALELLRSNGVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSIDHHQGIGHNTINSNQRAQDNNDDMNGASRVLFPFSDMKELSST-----TQEKSHGNNTY--WNGMFSNTGGSSW 296
BLAST of rna-XM_004494780.3 vs. Araport11
Match: | (Symbols: DAG1 | dof affecting germination 1 | chr3:22896212-22897150 FORWARD LENGTH=312) HSP 1 Score: 127.487 bits (319), Expect = 2.251e-35 Identity = 98/269 (36.43%), Postives = 132/269 (49.07%), Query Frame = 0
Query: 12 MSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKN------------------NKLISSSSQNNIIKGHDLNL-AFPSMDKYP---ASMFSSTSGLINNSATNYV-----PNNSLMMMSSSDAS---------GQEIK-----------PT---------NLGFSLENRYSNSYEV-----QVQEN------VGTLLFPFGDMNQISTTHHVEVEHDKEQGNSTGYNWNGVIGE--GSSW 211
M +K R +E++NCPRC S+NTKFCYYNNYSLTQPRY CK C+RYWT+GGSLRN+PVGGSSRKN N I SSQ DLNL +FP M + S F + NN+ ++ + P ++L ++ S+ S GQ + PT NL FS+++ + + Q+N +LFPF DM ++S+T +K GN+T WNG+ GSSW
Sbjct: 51 METRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSSTPLASPSNPKLPDLNPPILFSSQIPNKSNKDLNLLSFPVMQDHHHHGMSHFFHMPKIENNNTSSSIYASSSPVSALELLRSNGVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSIDHHQGIGHNTINSNQRAQDNNDDMNGASRVLFPFSDMKELSST-----TQEKSHGNNTY--WNGMFSNTGGSSW 312
BLAST of rna-XM_004494780.3 vs. Araport11
Match: | (Symbols: DAG1 | dof affecting germination 1 | chr3:22895495-22897150 FORWARD LENGTH=324) HSP 1 Score: 127.102 bits (318), Expect = 2.975e-35 Identity = 98/269 (36.43%), Postives = 132/269 (49.07%), Query Frame = 0
Query: 12 MSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKN------------------NKLISSSSQNNIIKGHDLNL-AFPSMDKYP---ASMFSSTSGLINNSATNYV-----PNNSLMMMSSSDAS---------GQEIK-----------PT---------NLGFSLENRYSNSYEV-----QVQEN------VGTLLFPFGDMNQISTTHHVEVEHDKEQGNSTGYNWNGVIGE--GSSW 211
M +K R +E++NCPRC S+NTKFCYYNNYSLTQPRY CK C+RYWT+GGSLRN+PVGGSSRKN N I SSQ DLNL +FP M + S F + NN+ ++ + P ++L ++ S+ S GQ + PT NL FS+++ + + Q+N +LFPF DM ++S+T +K GN+T WNG+ GSSW
Sbjct: 63 METRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSSTPLASPSNPKLPDLNPPILFSSQIPNKSNKDLNLLSFPVMQDHHHHGMSHFFHMPKIENNNTSSSIYASSSPVSALELLRSNGVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSIDHHQGIGHNTINSNQRAQDNNDDMNGASRVLFPFSDMKELSST-----TQEKSHGNNTY--WNGMFSNTGGSSW 324
BLAST of rna-XM_004494780.3 vs. Araport11
Match: | (Symbols: DAG2 | DOF AFFECTING GERMINATION 2 | chr2:19133832-19134905 FORWARD LENGTH=357) HSP 1 Score: 115.161 bits (287), Expect = 1.994e-30 Identity = 45/59 (76.27%), Postives = 54/59 (91.53%), Query Frame = 0
Query: 12 MSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGG 70
++E+K R +E+LNCPRC S+NTKFCYYNNYSLTQPRY CK C+RYWT+GGSLRN+PVGG
Sbjct: 57 VAERKARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 115
BLAST of rna-XM_004494780.3 vs. Araport11
Match: | (Symbols: DAG2 | DOF AFFECTING GERMINATION 2 | chr2:19133166-19134905 FORWARD LENGTH=369) HSP 1 Score: 115.161 bits (287), Expect = 2.528e-30 Identity = 45/59 (76.27%), Postives = 54/59 (91.53%), Query Frame = 0
Query: 12 MSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGG 70
++E+K R +E+LNCPRC S+NTKFCYYNNYSLTQPRY CK C+RYWT+GGSLRN+PVGG
Sbjct: 69 VAERKARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 127
BLAST of rna-XM_004494780.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M161|DOF41_ARATH (Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana OX=3702 GN=DOF4.1 PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 1.061e-39 Identity = 92/239 (38.49%), Postives = 115/239 (48.12%), Query Frame = 0
Query: 12 MSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKL-------------------------------ISSSSQNNIIKGHDLNLAF--PSMDKYPASMFSSTSGLINNSATNYVPNNSLMMMSSSDASGQEIKPTNLGFSL---ENRYSNSYEVQVQENVGTLLFPFGDMNQISTTHHVEVEHD----KEQGNSTGYNWNGVIGEGSS 210
M+ TR +E NCPRC SSNTKFCYYNNYSL QPRYLCK+C+RYWT+GGSLRN+PVGG SRKN KL S + QNN +DL+L+F P DK + S + N + + M+ E NLGFSL E N V E +++P+GD HH V HD K +G S+ W+G+I G S
Sbjct: 57 MTTMSTRPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKKLPFPNSSTSSSTKNLPDLNPPFVFTSSASSSNPSKTHQNN----NDLSLSFSSPMQDKRAQGHYGHFSEQVVTGGQNCLFQAPMGMIQFRQEYDHEHPKKNLGFSLDRNEEEIGNHDNFVVNEEGSKMMYPYGDHEDRQQHHH--VRHDDGNKKREGGSSNELWSGIILGGDS 289
BLAST of rna-XM_004494780.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q43385|DOF37_ARATH (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 1.407e-37 Identity = 93/241 (38.59%), Postives = 128/241 (53.11%), Query Frame = 0
Query: 12 MSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKN------------------NKLISSSSQNNIIKGHDLN-LAFPSMDK--YPASMFSSTSGLINNSATNYVP-----NNSLMMMSSSDASGQEIKPT--NLGFSLENRYSNSYEV-----QVQEN------VGTLLFPFGDMNQISTTHHVEVEHDKEQGNSTGYNWNGVIGE--GSSW 211
M +K R +E++NCPRC S+NTKFCYYNNYSLTQPRY CK C+RYWT+GGSLRN+PVGGSSRKN N I SSQ DLN L+FP M + A ++G+ + ++P +NS++ S + + K + NL FS+++ + + Q+N +LFPF DM ++S+T +K GN+T WNG+ GSSW
Sbjct: 63 METRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSSTPLASPSNPKLPDLNPPILFSSQIPNKSNKDLNLLSFPVMQDHHHHALELLRSNGVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSIDHHQGIGHNTINSNQRAQDNNDDMNGASRVLFPFSDMKELSST-----TQEKSHGNNTY--WNGMFSNTGGSSW 296
BLAST of rna-XM_004494780.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9ZPY0|DOF25_ARATH (Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 2.456e-29 Identity = 45/59 (76.27%), Postives = 54/59 (91.53%), Query Frame = 0
Query: 12 MSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGG 70
++E+K R +E+LNCPRC S+NTKFCYYNNYSLTQPRY CK C+RYWT+GGSLRN+PVGG
Sbjct: 69 VAERKARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 127
BLAST of rna-XM_004494780.3 vs. UniProtKB/Swiss-Prot
Match: sp|O82155|DOF17_ARATH (Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.971e-29 Identity = 46/81 (56.79%), Postives = 63/81 (77.78%), Query Frame = 0
Query: 7 LNSCRMSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKLISSSSQNNI 87
+ + + ++ + +EQL CPRC S NTKFCYYNNY+L+QPR+ CK C+RYWT+GG+LRNIPVGG +RK+NK SS +N+
Sbjct: 17 MTTAKQNQPELPEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNKRSGSSPSSNL 97
BLAST of rna-XM_004494780.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8LAP8|DOF46_ARATH (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 4.621e-29 Identity = 49/66 (74.24%), Postives = 56/66 (84.85%), Query Frame = 0
Query: 14 EKKTRVE--EQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNK 77
E+K R E + +NCPRC S+NTKFCYYNNYSLTQPRY CK C+RYWT+GGSLRNIPVGG SRKN +
Sbjct: 42 ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKR 107
BLAST of rna-XM_004494780.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FGD6|DOF58_ARATH (Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana OX=3702 GN=DOF5.8 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.861e-29 Identity = 70/182 (38.46%), Postives = 106/182 (58.24%), Query Frame = 0
Query: 17 TRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNK---LISSSSQNNIIKGHDLNL-AFPSMDKYPASMFSSTSGLIN--NSATNYVPNNSLMM-----MSSSDASGQEIKPTNLGFSLENRYSNSYEVQVQENVGTLLFPF--GDMNQISTTHHV 185
T +EQL+CPRC+S+NTKFCYYNNY+ +QPR+ CK+C+RYWT GG+LR+IPVGG SRK++K SS++ +++ + L A P + +P S SS G+ SA+++ S ++ +S + G P G L + SY V+ G ++PF G + +TT H+
Sbjct: 26 TDQQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKSSKRSRTYSSAATTSVVGSRNFPLQATPVL--FPQS--SSNGGITTAKGSASSFYGGFSSLINYNAAVSRNGPGGGFNGPDAFGLGLGH---GSYYEDVRYGQGITVWPFSSGATDAATTTSHI 200
BLAST of rna-XM_004494780.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q84TE9|DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.334e-28 Identity = 46/65 (70.77%), Postives = 55/65 (84.62%), Query Frame = 0
Query: 20 EEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKLISSSSQ 84
E L CPRC S+NTKFCYYNNYSLTQPRY CK+C+RYWT+GG+LRNIPVGG RKN + SS+++
Sbjct: 52 ELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRSTSSAAR 116
BLAST of rna-XM_004494780.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8LE43|DOF21_ARATH (Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana OX=3702 GN=DOF2.1 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 9.970e-28 Identity = 56/118 (47.46%), Postives = 72/118 (61.02%), Query Frame = 0
Query: 21 EQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKLISSSS----------------QNNIIKGH-----------DLNLAFPSMDKYPASMFSST 111
E NCPRC+S NTKFCYYNNYSL+QPRY CK+C+RYWT+GG+LRN+PVGG R+N + SS+ QN +I G DLNLAF ++ K+ S ++T
Sbjct: 46 EAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSSSAFSKNNNNKSINFHTDPLQNPLITGMPPSSFGYDHSIDLNLAFATLQKHHLSSQATT 163
BLAST of rna-XM_004494780.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SXG8|DOF1_ORYSJ (Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.435e-27 Identity = 98/320 (30.63%), Postives = 130/320 (40.62%), Query Frame = 0
Query: 13 SEKKTRV--EEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPV-----------------------------------------GGSSRKNNKLISSSSQNNIIKGHDLNLAFP------SMDKYPASMFSSTSGLIN---------------------NSATNYVPNNSLMMMSSSDASG----QEIKPTN---------LGFSLENR----------YSNSYEVQ-VQENVGTLLFPFGDMNQISTTHHV---------------EVEHDKEQ----------GNSTGYNWNGVIGEGS--SW 211
+E++ R E+ LNCPRC S+NTKFCYYNNYSL QPRY CKTC+RYWT+GGSLRN+PV GG + KN KL+ +Q DLNLAFP + ++PA +S + N S Y+P M M + A+ E + LGFSL+ + +S +Q V E+ G LLFPF D+ ++ + +H KEQ G+ T WNG+IG GS SW
Sbjct: 66 TERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSSSAASASPASASTANSVVTSASMSMSMASTGGGASKNPKLVHEGAQ-------DLNLAFPHHGGLQAPGEFPAFPSLESSSVCNPGGPMGTNGRGGGALSAMELLRSTGCYMPLQVPMQMPAEYATPGFALGEFRAPPPPPQSSQSLLGFSLDAHGSVGGPSAAGFGSSAGLQGVPESTGRLLFPFEDLKPTVSSGTGGGGASGGGAGVDGGHQFDHGKEQQAGGGGGGPGGHDTPGFWNGMIGGGSGTSW 378
BLAST of rna-XM_004494780.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M2U1|DOF36_ARATH (Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana OX=3702 GN=DOF3.6 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.576e-27 Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0
Query: 20 EEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKLISSSSQNNII 88
E LNCPRC S+NTKFCY+NNYSLTQPR+ CKTC+RYWT+GGSLRN+PVGG R+N + S S ++
Sbjct: 73 EAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRRNKRSKSRSKSTVVV 141
BLAST of rna-XM_004494780.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XUS6|A0A1S2XUS6_CICAR (Dof zinc finger protein OS=Cicer arietinum OX=3827 GN=LOC101515645 PE=4 SV=1) HSP 1 Score: 437.573 bits (1124), Expect = 4.015e-155 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
Query: 1 MEGINDLNSCRMSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKLISSSSQNNIIKGHDLNLAFPSMDKYPASMFSSTSGLINNSATNYVPNNSLMMMSSSDASGQEIKPTNLGFSLENRYSNSYEVQVQENVGTLLFPFGDMNQISTTHHVEVEHDKEQGNSTGYNWNGVIGEGSSW 211
MEGINDLNSCRMSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKLISSSSQNNIIKGHDLNLAFPSMDKYPASMFSSTSGLINNSATNYVPNNSLMMMSSSDASGQEIKPTNLGFSLENRYSNSYEVQVQENVGTLLFPFGDMNQISTTHHVEVEHDKEQGNSTGYNWNGVIGEGSSW
Sbjct: 1 MEGINDLNSCRMSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKLISSSSQNNIIKGHDLNLAFPSMDKYPASMFSSTSGLINNSATNYVPNNSLMMMSSSDASGQEIKPTNLGFSLENRYSNSYEVQVQENVGTLLFPFGDMNQISTTHHVEVEHDKEQGNSTGYNWNGVIGEGSSW 211
BLAST of rna-XM_004494780.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0K8K5U8|A0A0K8K5U8_CAJCA (Dof zinc finger protein OS=Cajanus cajan OX=3821 GN=Dof24 PE=4 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 2.272e-62 Identity = 125/247 (50.61%), Postives = 151/247 (61.13%), Query Frame = 0
Query: 12 MSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKLISS------------SSQNNIIKG-HDLNLAFP-SMDKYPASMFSSTSGL----INNSATNY-----------------------VPNNSLMMMSSSDASGQ------EIKPTNLGFSLENRYSNSYEVQVQENVGTLLFPFGDMNQISTTHHVEVEHDKEQGNSTGYNWNGVIGEGSSW 211
+SEKK + +EQLNCPRC S+NTKFCYYNNYSLTQPRY CKTC+RYWT+GGSLRN+PVGG SRKN K+I S SSQN ++G HDLNLAFP +MDKY S + I +S T++ P + MMS SD+ Q EIKP NL FS++ + SY VQ + G LLFPFGD+ Q+S VEVEH+KEQGN+T W G+IGEGSSW
Sbjct: 5 VSEKKAKPQEQLNCPRCSSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKVIVSSKVPDLNPPSLVSSQNPKMQGVHDLNLAFPAAMDKYHGMSMSPYVEVPKLEIGDSTTHHHSSSSSSLSALELLQSGMASRGLSPYAANSMMSGSDSLYQPGYPMHEIKP-NLTFSVDGFGNRSYGVQ-ENGSGRLLFPFGDIKQLSAG--VEVEHNKEQGNNTTGYWTGIIGEGSSW 247
BLAST of rna-XM_004494780.3 vs. UniProtKB/TrEMBL
Match: tr|V7BQJ6|V7BQJ6_PHAVU (Dof zinc finger protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G114900g PE=4 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 2.394e-62 Identity = 132/263 (50.19%), Postives = 156/263 (59.32%), Query Frame = 0
Query: 1 MEGINDLNSCRMS--EKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKLISS----------------SSQNNIIKG-HDLNLAFP-SMDKY-------------------------PASMFSSTSGLINNSATNYVPNNSLMMMSSSDA------SGQEIKPTNLGFSLENRYSNSYEVQVQENVGTLLFPFGDMNQISTTHHVEVEHDKEQG-NSTGYNWNGVIGEGSSW 211
ME I NSC + EKK R +EQLNCPRC S+NTKFCYYNNYSLTQPRY CKTC+RYWT+GGSLRN+PVGG SRKN K SS SSQN ++G HDLNLAFP +MDKY P+S+ S G+++ Y PN M+SSD+ QEIKP NL FS++ + S+ VQ G LLFPFGD+ +S VEVEH+KEQG N TGY W G+IGEGSSW
Sbjct: 1 MEEIGP-NSCAQASLEKKARPQEQLNCPRCSSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKATSSKVPDLNPPSLSSVSAISSQNPKMQGVHDLNLAFPAAMDKYHGMSPYGEMPKLEIGGENNTGHHHSPSSL-SPPYGMVSRGLNPYAPN---PFMTSSDSLYTPNYPMQEIKP-NLSFSVDGFGNRSHGVQENGGGGRLLFPFGDIKHLSAG--VEVEHNKEQGNNPTGY-WTGIIGEGSSW 254
BLAST of rna-XM_004494780.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0B5JFD9|A0A0B5JFD9_CAJCA (Dof zinc finger protein (Fragment) OS=Cajanus cajan OX=3821 GN=Dof24 PE=4 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 3.467e-62 Identity = 125/246 (50.81%), Postives = 150/246 (60.98%), Query Frame = 0
Query: 13 SEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKLISS------------SSQNNIIKG-HDLNLAFP-SMDKYPASMFSSTSGL----INNSATNY-----------------------VPNNSLMMMSSSDASGQ------EIKPTNLGFSLENRYSNSYEVQVQENVGTLLFPFGDMNQISTTHHVEVEHDKEQGNSTGYNWNGVIGEGSSW 211
SEKK + +EQLNCPRC S+NTKFCYYNNYSLTQPRY CKTC+RYWT+GGSLRN+PVGG SRKN K+I S SSQN ++G HDLNLAFP +MDKY S + I +S T++ P + MMS SD+ Q EIKP NL FS++ + SY VQ + G LLFPFGD+ Q+S VEVEH+KEQGN+T W G+IGEGSSW
Sbjct: 1 SEKKAKPQEQLNCPRCSSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKVIVSSKVPDLNPPSLVSSQNPKMQGVHDLNLAFPAAMDKYHGMSMSPYVEVPKLEIGDSTTHHHSSSSSSLSALELLQSGMASRGLSPYAANSMMSGSDSLYQPGYPMHEIKP-NLTFSVDGFGNRSYGVQ-ENGSGRLLFPFGDIKQLSAG--VEVEHNKEQGNNTTGYWTGIIGEGSSW 242
BLAST of rna-XM_004494780.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TCC9|A0A1S3TCC9_VIGRR (Dof zinc finger protein OS=Vigna radiata var. radiata OX=3916 GN=LOC106754008 PE=4 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.593e-61 Identity = 128/260 (49.23%), Postives = 153/260 (58.85%), Query Frame = 0
Query: 1 MEGINDLNSCRMS-EKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKLISS------------SSQNNIIKG-HDLNLAFP-SMDKY------------------------PASM---FSSTSGLINNSATNYVPNNSLMMMSSSDA------SGQEIKPTNLGFSLENRYSNSYEVQVQENVGTLLFPFGDMNQISTTHHVEVEHDKEQG-NSTGYNWNGVIGEGSSW 211
ME I + R S EKK + +EQLNCPRC S+NTKFCYYNNYSLTQPRY CKTC+RYWT+GGSLRN+PVGG SRKN K S SSQN ++G HDLNLAFP ++DKY P+S S T G++ Y PN+ + SSD+ QEIKP NL FS++ + S+ VQ G LLFPFGD+ +S VEVEH+KEQG N TGY W G+IGEGSSW
Sbjct: 1 MEEIGPNSCARPSLEKKAKPQEQLNCPRCSSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKATLSKVPDLNPPVSAISSQNPKMQGVHDLNLAFPAAIDKYHGMSPYVEMPKLEIGGENTSHHHSPSSAPTSLSPTYGMLPRGLNPYAPNS---FLPSSDSLYTPIYPMQEIKP-NLSFSVDGFGNRSHGVQENGGGGRLLFPFGDIKHLSAG--VEVEHNKEQGNNPTGY-WTGIIGEGSSW 253
BLAST of rna-XM_004494780.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3S4T1|A0A0S3S4T1_PHAAN (Dof zinc finger protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G123900 PE=4 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 3.564e-61 Identity = 128/261 (49.04%), Postives = 154/261 (59.00%), Query Frame = 0
Query: 1 MEGINDLNSCRM--SEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKLISS------------SSQNNIIKG-HDLNLAFP-SMDKY------------------------PASM---FSSTSGLINNSATNYVPNNSLMMMSSSDA------SGQEIKPTNLGFSLENRYSNSYEVQVQENVGTLLFPFGDMNQISTTHHVEVEHDKEQG-NSTGYNWNGVIGEGSSW 211
ME I NSC SEKK + +EQLNCPRC S+NTKFCYYNNYSLTQPRY CKTC+RYWT+GGSLRN+PVGG SRKN K S SSQN ++G HDLNLAFP ++DKY P+S S T G++ Y PN+ M +SD+ QEIKP NL FS++ + ++ VQ G LLFPFGD+ +S VEVEH+KEQG N TGY W G+IG+GSSW
Sbjct: 1 MEEIGP-NSCARPSSEKKAKPQEQLNCPRCSSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKATLSKVPDLNPPVSAISSQNPKMQGVHDLNLAFPAAIDKYHGMSPYAEMPKLEIGGDNTSHHHSPSSAPTSLSPTYGMLPRGLNPYAPNS---FMPNSDSLYTPIYPMQEIKP-NLSFSVDGFGNRAHGVQENGGGGRLLFPFGDIKHLSAG--VEVEHNKEQGNNPTGY-WTGIIGDGSSW 253
BLAST of rna-XM_004494780.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9VD64|A0A0L9VD64_PHAAN (Dof zinc finger protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0072600 PE=4 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 3.564e-61 Identity = 128/261 (49.04%), Postives = 154/261 (59.00%), Query Frame = 0
Query: 1 MEGINDLNSCRM--SEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKLISS------------SSQNNIIKG-HDLNLAFP-SMDKY------------------------PASM---FSSTSGLINNSATNYVPNNSLMMMSSSDA------SGQEIKPTNLGFSLENRYSNSYEVQVQENVGTLLFPFGDMNQISTTHHVEVEHDKEQG-NSTGYNWNGVIGEGSSW 211
ME I NSC SEKK + +EQLNCPRC S+NTKFCYYNNYSLTQPRY CKTC+RYWT+GGSLRN+PVGG SRKN K S SSQN ++G HDLNLAFP ++DKY P+S S T G++ Y PN+ M +SD+ QEIKP NL FS++ + ++ VQ G LLFPFGD+ +S VEVEH+KEQG N TGY W G+IG+GSSW
Sbjct: 1 MEEIGP-NSCARPSSEKKAKPQEQLNCPRCSSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKATLSKVPDLNPPVSAISSQNPKMQGVHDLNLAFPAAIDKYHGMSPYAEMPKLEIGGDNTSHHHSPSSAPTSLSPTYGMLPRGLNPYAPNS---FMPNSDSLYTPIYPMQEIKP-NLSFSVDGFGNRAHGVQENGGGGRLLFPFGDIKHLSAG--VEVEHNKEQGNNPTGY-WTGIIGDGSSW 253
BLAST of rna-XM_004494780.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3M0E2|A0A2K3M0E2_TRIPR (Dof zinc finger protein OS=Trifolium pratense OX=57577 GN=L195_g040311 PE=4 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.126e-61 Identity = 130/261 (49.81%), Postives = 160/261 (61.30%), Query Frame = 0
Query: 1 MEGINDLNSCRMS--EKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKLIS--------------------SSSQNNIIK-GHDLNLAFPSMDKYPASMF---------------SSTSGLINNSATN-----YVPNNSLMMMSS-----SDASGQEIKPTNLGFSLENRYSN-SYE--VQVQE-NVGTLLFPFGDMNQISTTHHVEVEHDKEQGNSTGYNWNGVIGEGS 209
MEG+ NSC EKK R +EQ+NCPRC S+NTKFCYYNNYSLTQPRY CKTC+RYWT+GGSLRN+PVGG SRKN K+I+ S+SQN ++ G DLNLAFPSM+ Y SS L+ +S + Y NN+ +M +S S QE+KP+ LGFS++ N SY+ V VQE G LLFPFGD+N+ +T VEVEH+KEQGNSTG+ WNG+IGEGS
Sbjct: 1 MEGLAP-NSCPRQGLEKKARPQEQINCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKVINPSSTKIPDLNPPTLVQVSPLSNSQNPKMQGGQDLNLAFPSMENYHQHHHGMSSYVEMHNNNESSSSALDLLRSSMASRGLNPYANNNNTLMTNSNTIFPSGFPMQEVKPS-LGFSIDGINGNRSYDDHVHVQEGGGGRLLFPFGDVNKQLSTSGVEVEHNKEQGNSTGF-WNGMIGEGS 258
BLAST of rna-XM_004494780.3 vs. UniProtKB/TrEMBL
Match: tr|I3S8S6|I3S8S6_LOTJA (Dof zinc finger protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 3.575e-59 Identity = 129/276 (46.74%), Postives = 159/276 (57.61%), Query Frame = 0
Query: 1 MEGINDLNSC---RMSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKLIS------------------------------SSSQNNIIKG-HDLNLAFPSMDKY-----------------------PASMFSSTSGLINNSATN----YVPNNSLMM----MSSSDASGQEIKPTNLGFSLENRYSNSYEVQVQEN-VGTLLFPFGD-MNQISTTHHVEVEHDKEQGNSTGYNWNGVIGEGS 209
MEGI D NSC + EKKTR +EQ+NCPRC S+NTKFCYYNNYSLTQPRY CKTC+RYWT+GGSLRN+PVGG SRKN K+++ S+SQN + G DLNLAFP M+ Y P + S+ L + A+ Y PNNSLM + S QE+KP+ LGFS++ + SYE QVQE+ G LLFPFGD + Q+S +VE +KEQGNSTGY W G++GEGS
Sbjct: 1 MEGI-DPNSCVNRTVMEKKTRPQEQINCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKVLTSSAAAAAAAAASSKAIPDLNPQPTTLSSSVSNSQNPKMHGGQDLNLAFPPMENYHHHHGMVPYVEMHNGGDHSSSSAPTNSLSALELLRYSMASRGMNPYAPNNSLMPNTNSLYPSGFPMQEVKPS-LGFSVDGIGNRSYEHQVQESGGGRLLFPFGDHVKQLSAE---QVEQNKEQGNSTGY-WTGMMGEGS 270
BLAST of rna-XM_004494780.3 vs. UniProtKB/TrEMBL
Match: tr|I3SV35|I3SV35_LOTJA (Dof zinc finger protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 4.884e-59 Identity = 129/277 (46.57%), Postives = 159/277 (57.40%), Query Frame = 0
Query: 1 MEGINDLNSC---RMSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKLIS------------------------------SSSQN-NIIKGHDLNLAFPSMDKY-----------------------PASMFSSTSGLINNSATN----YVPNNSLMM----MSSSDASGQEIKPTNLGFSLENRYSNSYEVQVQEN--VGTLLFPFGD-MNQISTTHHVEVEHDKEQGNSTGYNWNGVIGEGS 209
MEGI D NSC + EKKTR +EQ+NCPRC S+NTKFCYYNNYSLTQPRY CKTC+RYWT+GGSLRN+PVGG SRKN K+++ S+SQN + G DLNLAFP M+ Y P + S+ L + A+ Y PNNSLM + S QE+KP+ LGFS++ + SYE QVQE+ G LLFPFGD + Q+S +VE +KEQGNSTGY W G++GEGS
Sbjct: 1 MEGI-DPNSCVNRTVMEKKTRPQEQINCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKVLTSSAAAAAAAAASSKAIPDLNPQPTTLSSSVSNSQNPKMHGGQDLNLAFPPMENYHHHHGMVPYVEMHNGGDHSSSSAPTNSLSALELLRYSMASRGMNPYAPNNSLMPNTNSLYPSGFPMQEVKPS-LGFSVDGIGNRSYEHQVQESGGGGRLLFPFGDHVKQLSAE---QVEQNKEQGNSTGY-WTGMMGEGS 271 The following BLAST results are available for this feature:
BLAST of rna-XM_004494780.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11) Total hits: 10
BLAST of rna-XM_004494780.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot) Total hits: 10
BLAST of rna-XM_004494780.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_004494780.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004494780.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004494780.3; organism=Cicer arietinum; type=mRNA; length=636bpback to top protein sequence of rna-XM_004494780.3_CaCDCfrontier-NCBI_v1 >rna-XM_004494780.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004494780.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004494780.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=211bpback to top mRNA from alignment at chr3:39572894..39574015+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_004494780.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004494780.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004494780.3; organism=Cicer arietinum; type=mRNA; length=1122bp; location=Sequence derived from: chr3:39572894..39574015+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at chr3:39572894..39574015+ >rna-XM_004494780.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004494780.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004494780.3; organism=Cicer arietinum; type=CDS; length=636bp; location=Sequence derived from: chr3:39572894..39574015+ (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|