rna-XM_004494913.3
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_004494913.3 vs. Araport11
Match: | (Symbols: AtMLKL1 | Mixed Lineage Kinase Like 1 | chr1:166853-167798 REVERSE LENGTH=267) HSP 1 Score: 129.413 bits (324), Expect = 3.386e-36 Identity = 86/257 (33.46%), Postives = 140/257 (54.47%), Query Frame = 0 Query: 3 SSSSPPQPKPIILQKPPGYRDPNTAQKPLPPRKAA-----LPPSFRPKPKKRRCCRKCCC--TFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNIT---VNDDVAYLNANTTTMVELKNRNKKIAWHFDQSNVHILAENGDL--NLGSTKVAPFDVKVRNTTQLKVETKVRGVELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTLRQLQNGVSPHCSLTILKWIKIR 247 ++ P QP LQKPPG+RD Q PP A P P KKRRC CI+ +++L++++AVAV ++ Y P LP + SF++S FN + +D ++L+A+TT++++ +N N K+ +++ ++V ++ D NL STKV F K N T + V T VR ++D +RL+ SK L V KT+ G+ V + + V++ C GV L+ L + ++ C++ +LKWIK+R Sbjct: 15 AAEKPLQPA---LQKPPGFRDQQN-QPSAPPSGTATLPRRRPRPIHPADKKRRCSFCRVFCCCVCILFAVILLLILIAVAVFFLWYSPKLPVVRLASFKISNFNFSDGKSDDGWSFLSADTTSVLDFRNPNGKLTFYYGDTDVAVILGEKDFETNLESTKVKGFIEKPGNRTAVIVPTTVRKRQVDDPTAKRLQVELKSKKLLVTVTAKTKVGLAVGSRKIVTVGVSLRCGGVILQTLDSKMA-QCTIKMLKWIKLR 266
BLAST of rna-XM_004494913.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:19008392-19009247 FORWARD LENGTH=252) HSP 1 Score: 125.946 bits (315), Expect = 6.125e-35 Identity = 96/245 (39.18%), Postives = 138/245 (56.33%), Query Frame = 0 Query: 14 ILQKPPGYRDPNTAQKPLPP--------RKAA-LPPSFRPKPKKRRCCRKCCCTFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAYLNANTTTMVELKNRNKKIAWHFDQSNVHILAENG--DLNLGSTKVAPFDVKVRNTTQLKVETKVRGVELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTLRQLQNGVSPHCSLTILKWIKIR 247 +LQKPPGYRDPN + P PP RKA +P S+RPK K+R CCR CCC CI L+L I +L+V AV Y+ + P LP F + SFR+ F + + D A L+A VE+KN N K+ +++ + V + +G + +G T + F +N+T +KVET V+ ++ +RL + F SK L V KT+ G+ V G + V + C GV+L +L SP C L LKW+ I+ Sbjct: 9 VLQKPPGYRDPNMSSPPPPPPPIQQQPMRKAVPMPTSYRPKKKRRSCCRFCCCCICITLVLFIFLLLVGTAVFYLWFDPKLPTFSLASFRLDGFKLADDPDGASLSATAVARVEMKNPNSKLVFYYGNTAVDLSVGSGNDETGMGETTMNGFRQGPKNSTSVKVETTVKNQLVERGLAKRLAAKFQSKDLVINVVAKTKVGLGVGGIKIGMLAVNLRCGGVSLNKLDTD-SPKCILNTLKWVTIQ 252
BLAST of rna-XM_004494913.3 vs. Araport11
Match: | (Symbols: AtMLKL1 | Mixed Lineage Kinase Like 1 | chr1:166929-167798 REVERSE LENGTH=289) HSP 1 Score: 123.25 bits (308), Expect = 1.497e-33 Identity = 82/252 (32.54%), Postives = 135/252 (53.57%), Query Frame = 0 Query: 3 SSSSPPQPKPIILQKPPGYRDPNTAQKPLPPRKAALPPS----FRPKPKKRRCCRKCCC--TFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNIT---VNDDVAYLNANTTTMVELKNRNKKIAWHFDQSNVHILAENGDL--NLGSTKVAPFDVKVRNTTQLKVETKVRGVELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTLRQLQNGVSPHCSLTILKW 243 ++ P QP LQKPPG+RD P A LP P KKRRC CI+ +++L++++AVAV ++ Y P LP + SF++S FN + +D ++L+A+TT++++ +N N K+ +++ ++V ++ D NL STKV F K N T + V T VR ++D +RL+ SK L V KT+ G+ V + + V++ C GV L+ L + ++ C++ +LKW Sbjct: 15 AAEKPLQPA---LQKPPGFRDQQNQPSAPPSGTATLPRRRPRPIHPADKKRRCSFCRVFCCCVCILFAVILLLILIAVAVFFLWYSPKLPVVRLASFKISNFNFSDGKSDDGWSFLSADTTSVLDFRNPNGKLTFYYGDTDVAVILGEKDFETNLESTKVKGFIEKPGNRTAVIVPTTVRKRQVDDPTAKRLQVELKSKKLLVTVTAKTKVGLAVGSRKIVTVGVSLRCGGVILQTLDSKMA-QCTIKMLKW 262
BLAST of rna-XM_004494913.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:480176-481056 REVERSE LENGTH=261) HSP 1 Score: 121.324 bits (303), Expect = 4.437e-33 Identity = 87/251 (34.66%), Postives = 138/251 (54.98%), Query Frame = 0 Query: 14 ILQKPPGYRDPNTA-QKPLP-----------PRKAALPPSFRPKPKKR-RCCRKCCCTFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNIT---VNDDVAYLNANTTTMVELKNRNKKIAWHFDQSNVHILAENGDL--NLGSTKVAPFDVKVRNTTQLKVETKVRGVELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTLRQLQNGVSPHCSLTILKWIKI 246 +LQKPPGYR+ ++ Q PL P K A+P +F P K++ CR CC CI + ++IL+L++ V+V ++ Y P LP + SFRVS FN + D ++ L A T ++ +N N K+ +++ +V + D +LGSTKV F K N T + V KV+ ++D +RL++ SK L +V KT+ G+ V + + VT+ C GV L+ L + +S C++ +LKWIK+ Sbjct: 10 VLQKPPGYRELHSQPQTPLGSSSSSSSMLRRPPKHAIPAAFYPTKKRQWSRCRVFCCCVCITVAIVILLLILTVSVFFLYYSPRLPVVRLSSFRVSNFNFSGGKAGDGLSQLTAEATARLDFRNPNGKLRYYYGNVDVAVSVGEDDFETSLGSTKVKGFVEKPGNRTVVIVPIKVKKQQVDDPTVKRLRADMKSKKLVVKVMAKTKVGLGVGRRKIVTVGVTISCGGVRLQTLDSKMS-KCTIKMLKWIKL 259
BLAST of rna-XM_004494913.3 vs. Araport11
Match: | (Symbols: NHL13 | NDR/HIN1-like 13 | chr2:11566383-11567165 FORWARD LENGTH=260) HSP 1 Score: 76.2554 bits (186), Expect = 3.082e-16 Identity = 62/242 (25.62%), Postives = 113/242 (46.69%), Query Frame = 0 Query: 8 PQPKPIILQKPPG--YRDPNTAQKPLPPRKAALPPSFRPKPKKRRCCRKCCCTFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAYLNANTTTMVELKNRNKKIAWHFD-QSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRGVELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTLRQL---QNGVSPHCSLTILKW 243 P P ++Q P YR P PP A K R CR C C+F + +LI++ ++ AV+Y++Y+P P++ I F VS N+ + + ++ + V +N N KI +++ +S+V + + D++ G V F +N T +K+ ++L + R+ +++ K + ++++K +K + M V V CD VT+ +L VS CS + W Sbjct: 32 PPPSTYVIQVPKDQIYRIP-------PPENAHRFEQLSRKKTNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINL---NSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPV--FYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCD-VTVDKLTAPSRIVSRKCSHDVDLW 260
BLAST of rna-XM_004494913.3 vs. Araport11
Match: | (Symbols: NHL13 | NDR/HIN1-like 13 | chr2:11566383-11567165 FORWARD LENGTH=260) HSP 1 Score: 76.2554 bits (186), Expect = 3.082e-16 Identity = 62/242 (25.62%), Postives = 113/242 (46.69%), Query Frame = 0 Query: 8 PQPKPIILQKPPG--YRDPNTAQKPLPPRKAALPPSFRPKPKKRRCCRKCCCTFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAYLNANTTTMVELKNRNKKIAWHFD-QSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRGVELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTLRQL---QNGVSPHCSLTILKW 243 P P ++Q P YR P PP A K R CR C C+F + +LI++ ++ AV+Y++Y+P P++ I F VS N+ + + ++ + V +N N KI +++ +S+V + + D++ G V F +N T +K+ ++L + R+ +++ K + ++++K +K + M V V CD VT+ +L VS CS + W Sbjct: 32 PPPSTYVIQVPKDQIYRIP-------PPENAHRFEQLSRKKTNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINL---NSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPV--FYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCD-VTVDKLTAPSRIVSRKCSHDVDLW 260
BLAST of rna-XM_004494913.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:13001121-13002086 REVERSE LENGTH=321) HSP 1 Score: 68.9366 bits (167), Expect = 1.920e-13 Identity = 62/240 (25.83%), Postives = 111/240 (46.25%), Query Frame = 0 Query: 15 LQKPP------GYRDPNTAQKPLPPRKAALPPSFRPKPKKRRCC----RKCC-CTFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAYLNANTTTMVELKNRNKKIAWHFDQSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRGVELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVV--CDGVTLRQLQNGVSPHCSLTIL 241 ++PP G+R+ A + RK+ + KR C RKCC CT + ++LI++L+V ++ + + LP+ + + + S +I + +NAN T+++L N N K ++ I +EN +NLG ++ F N T LK+ T++R ++ L + K L+ V+V R + V W K+ + +V C+ V + NG+ P C + I Sbjct: 89 FKRPPSASRLSGFREEEEADRS---RKSGSFVDHIGQEDKRICASGCFRKCCACTCMFVSVVLIIVLLVGLSANSSI-KSILPQVLVTNLKFSRLDIAKSSTDLLMNANLNTVLQLSNNNDKTVLYYSPMKADISSEN--INLGKKTLSGFKQDPGNVTSLKILTRLRKSKVYDVDATLLTN--KEKTLEALVDVFLRGKLSVD-WLGFKVHIPIVIACESVKQSDVINGLKPACDVRIF 319
BLAST of rna-XM_004494913.3 vs. Araport11
Match: | (Symbols: NHL2 | NDR1/HIN1-like 2 | chr3:3676264-3676986 REVERSE LENGTH=240) HSP 1 Score: 67.3958 bits (163), Expect = 3.274e-13 Identity = 59/213 (27.70%), Postives = 100/213 (46.95%), Query Frame = 0 Query: 36 AALPPSFRPKPKKRR---------CCRKC------CCTFCI------ILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAY-LNANTTTMVELKNRNKKIAWHFDQSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRG---VELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGW--NSMKMDVTVVCD 221 A PS P PK R CC C CC CI IL+ + +IL VA +++++++P+ +F++ ++ F+ N+++ Y L+ N T ++N N+++ ++D+ +V GD GS V+ F +NTT + TK+ G V L R LK D K+ R+ K R ++ + W S K+ + CD Sbjct: 11 AYYGPSIPPPPKAHRSYNSPGFGCCCFSCLGSCLRCCGCCILSLICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFT----IRNPNQRVGVYYDEFSVS--GYYGDQRFGSANVSSFYQGHKNTTV--ILTKIEGQNLVVLGDGARTDLKD--DEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCD 213
BLAST of rna-XM_004494913.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:7185968-7186813 FORWARD LENGTH=281) HSP 1 Score: 63.929 bits (154), Expect = 8.781e-12 Identity = 52/216 (24.07%), Postives = 90/216 (41.67%), Query Frame = 0 Query: 7 PPQPKPIILQKPPGYRDPNTAQKPLPPRKAALPPSFRPKPKKRRCCRKCCCTFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAYLNANTTTMVELKNRN--KKIAWHFDQSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRGVELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVC 220 PP I L K YR P PP A + + CCR+C C LL++I++ +A Y++YQP P+F + V+ N+T + + + ++L+++N K+ +++ N + NG LG+ + F N T + K V+L + R+ L + + +K KV + M +TV C Sbjct: 54 PPGTYVIKLPKDQIYRVP-------PPENAHRYEYLSRRKTNKSCCRRCLCYSLSALLIIIVLAAIAFGFFYLVYQPHKPQFSVSGVSVTGINLTSSSPFSPV-----IRIKLRSQNVKGKLGLIYEKGNEADVFFNGT-KLGNGEFTAFKQPAGNVTVIVTVLKGSSVKLKSSSRKELTESQKKGKVPFGLRIKAPVKFKVGSVTTWTMTITVDC 256
BLAST of rna-XM_004494913.3 vs. Araport11
Match: | (Symbols: NHL10, ATNHL10, YLS9 | NDR1/HIN1-LIKE, ARABIDOPSIS NDR1/HIN1-LIKE 10, YELLOW-LEAF-SPECIFIC GENE 9 | chr2:15110635-15111318 FORWARD LENGTH=227) HSP 1 Score: 56.9954 bits (136), Expect = 1.425e-9 Identity = 50/197 (25.38%), Postives = 90/197 (45.69%), Query Frame = 0 Query: 37 ALPPSFRPKPK---KRRCCRKCCC----TFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAYLNANTTTMVELKNRNKKIAWHFDQSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRG-VELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTL 225 ++PP P PK +R R C C F +++ LI+IL VA + +++ +P +FH+ ++ F+ T D++ L N V ++N NK+I ++D+ H E + + + PF +NTT L + + V +A Q R L + S ++ + R K+ ++ V CD + L Sbjct: 15 SVPP---PAPKGYYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNI--LRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFS--TITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRL 204
BLAST of rna-XM_004494913.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9ZVD2|NHL13_ARATH (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.998e-15 Identity = 62/242 (25.62%), Postives = 113/242 (46.69%), Query Frame = 0 Query: 8 PQPKPIILQKPPG--YRDPNTAQKPLPPRKAALPPSFRPKPKKRRCCRKCCCTFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAYLNANTTTMVELKNRNKKIAWHFD-QSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRGVELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTLRQL---QNGVSPHCSLTILKW 243 P P ++Q P YR P PP A K R CR C C+F + +LI++ ++ AV+Y++Y+P P++ I F VS N+ + + ++ + V +N N KI +++ +S+V + + D++ G V F +N T +K+ ++L + R+ +++ K + ++++K +K + M V V CD VT+ +L VS CS + W Sbjct: 32 PPPSTYVIQVPKDQIYRIP-------PPENAHRFEQLSRKKTNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINL---NSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPV--FYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCD-VTVDKLTAPSRIVSRKCSHDVDLW 260
BLAST of rna-XM_004494913.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SRN1|NHL2_ARATH (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.189e-12 Identity = 59/213 (27.70%), Postives = 100/213 (46.95%), Query Frame = 0 Query: 36 AALPPSFRPKPKKRR---------CCRKC------CCTFCI------ILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAY-LNANTTTMVELKNRNKKIAWHFDQSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRG---VELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGW--NSMKMDVTVVCD 221 A PS P PK R CC C CC CI IL+ + +IL VA +++++++P+ +F++ ++ F+ N+++ Y L+ N T ++N N+++ ++D+ +V GD GS V+ F +NTT + TK+ G V L R LK D K+ R+ K R ++ + W S K+ + CD Sbjct: 11 AYYGPSIPPPPKAHRSYNSPGFGCCCFSCLGSCLRCCGCCILSLICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFT----IRNPNQRVGVYYDEFSVS--GYYGDQRFGSANVSSFYQGHKNTTV--ILTKIEGQNLVVLGDGARTDLKD--DEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCD 213
BLAST of rna-XM_004494913.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SJ52|NHL10_ARATH (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 1.391e-8 Identity = 50/197 (25.38%), Postives = 90/197 (45.69%), Query Frame = 0 Query: 37 ALPPSFRPKPK---KRRCCRKCCC----TFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAYLNANTTTMVELKNRNKKIAWHFDQSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRG-VELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTL 225 ++PP P PK +R R C C F +++ LI+IL VA + +++ +P +FH+ ++ F+ T D++ L N V ++N NK+I ++D+ H E + + + PF +NTT L + + V +A Q R L + S ++ + R K+ ++ V CD + L Sbjct: 15 SVPP---PAPKGYYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNI--LRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFS--TITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRL 204
BLAST of rna-XM_004494913.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XWD3|A0A1S2XWD3_CICAR (NDR1/HIN1-like protein 13 OS=Cicer arietinum OX=3827 GN=LOC101509920 PE=4 SV=1) HSP 1 Score: 508.449 bits (1308), Expect = 0.000e+0 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0 Query: 1 MESSSSPPQPKPIILQKPPGYRDPNTAQKPLPPRKAALPPSFRPKPKKRRCCRKCCCTFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAYLNANTTTMVELKNRNKKIAWHFDQSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRGVELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTLRQLQNGVSPHCSLTILKWIKIR 247 MESSSSPPQPKPIILQKPPGYRDPNTAQKPLPPRKAALPPSFRPKPKKRRCCRKCCCTFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAYLNANTTTMVELKNRNKKIAWHFDQSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRGVELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTLRQLQNGVSPHCSLTILKWIKIR Sbjct: 1 MESSSSPPQPKPIILQKPPGYRDPNTAQKPLPPRKAALPPSFRPKPKKRRCCRKCCCTFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAYLNANTTTMVELKNRNKKIAWHFDQSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRGVELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTLRQLQNGVSPHCSLTILKWIKIR 247
BLAST of rna-XM_004494913.3 vs. UniProtKB/TrEMBL
Match: tr|G7L402|G7L402_MEDTR (Late embryogenesis abundant hydroxyproline-rich glycoprotein, putative OS=Medicago truncatula OX=3880 GN=11431769 PE=4 SV=2) HSP 1 Score: 316.235 bits (809), Expect = 4.596e-106 Identity = 161/236 (68.22%), Postives = 185/236 (78.39%), Query Frame = 0 Query: 8 PQPKPIILQKPPGYRDPNTAQKPLPPRKAALPPSFRPKPKKRRCCRKCCCTFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAYLNANTTTMVELKNRNKKIAWHFDQSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRGVELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTLRQLQNGVSPHCSLTILKW 243 P+ KPIIL KPP YRDPN QKPLP R +LPPSFRPKPKKR CR CCTFCII L+L + ++A AVIYILYQPS+PEFH+GSFRV FNIT D AYL+ANT TMVE+KNRN K+ W F+QS+V I A+NGDLNLGSTKVA FDVKV+N T +K ETKVR EL+ +QRR+LKS F SKAL P VEVKTRT ++VQGW SM + VTVVC VTLRQ+QNG P CS T+ KW Sbjct: 6 PEQKPIILPKPPCYRDPNIQQKPLPTRNPSLPPSFRPKPKKRNYCRLFCCTFCIIFLILFFLFILAAAVIYILYQPSIPEFHLGSFRVPSFNITTKSDGAYLDANTITMVEVKNRNAKMVWRFEQSSVQIWADNGDLNLGSTKVAAFDVKVKNKTAVKGETKVRHEELNEKQRRKLKSAFSSKALVPSVEVKTRTSVRVQGWKSMMIGVTVVCGDVTLRQIQNGDMPPCSFTVFKW 241
BLAST of rna-XM_004494913.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4XRQ3|A0A9D4XRQ3_PEA (Late embryogenesis abundant protein LEA-2 subgroup domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_030185 PE=4 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 5.637e-104 Identity = 166/247 (67.21%), Postives = 196/247 (79.35%), Query Frame = 0 Query: 1 MESSSSPPQPKPIILQKPPGYRDPNTAQKPLPPRKAALPPSFRPKPKKRRCCRKCCCTFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAYLNANTTTMVELKNRNKKIAWHFDQSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRGVELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTLRQLQNGVSPHCSLTILKWIKIR 247 ME S P+ KPIILQKPPGYRDP T QK PRK LPPSFRPKPKKR CR CCCTFCI+L+ ILI ++ +A+ YILYQPSLPE H+GSFR+ F IT N D L+A+T +V++KNRN KIAWHFDQS+VHI +NGDL LGSTKVA FDVKV++ +++KV TKVR LD RQ+RRLKSVF+SKAL+P VEVKTRTG+KVQGW SM + VTVVC GVT+RQ+QNG SP CS TI +WIKI+ Sbjct: 1 MEQQS--PERKPIILQKPPGYRDPATPQKHPLPRKPPLPPSFRPKPKKRHYCRICCCTFCILLIFFILIFILFIALFYILYQPSLPEIHLGSFRIPDFKITKNADGGQLDADTIMVVDIKNRNTKIAWHFDQSSVHIWGDNGDLKLGSTKVAAFDVKVQDISKMKVHTKVRDEVLDGRQKRRLKSVFESKALQPSVEVKTRTGVKVQGWKSMTIGVTVVCSGVTVRQIQNGNSPLCSFTIFQWIKIK 245
BLAST of rna-XM_004494913.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3KN59|A0A2K3KN59_TRIPR (Late embryogenesis abundant protein LEA-2 subgroup domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g055792 PE=4 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 4.714e-88 Identity = 158/237 (66.67%), Postives = 181/237 (76.37%), Query Frame = 0 Query: 15 LQKPPGYRDPNTAQKPLPPRK-------AALPPSFRPKPKKRRCCRKCCCTFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAYLNANTTTMVELKNRNKKIAWHFDQSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRGVE-LDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTLRQLQNGVSPHCSLTILKW 243 LQKPPGY+D NT ++ K LPPSFRPKP+KR CCR CCCTFCIIL +LI I +VA +IY +YQPS PEFH+GSFRV FNIT DV+YL+A+T T+VE+KNRN K+ WHF+QSNV I AENG+LNLGSTKVA FDV V N T LK ETKVRG E LDA+QRRRLKSVFDSKAL P VEVKT+T + VQGW SM +DVTVVC VTL+Q+QNG PHCS I KW Sbjct: 5 LQKPPGYKDSNTPEQQTITIKQPHPPRKPPLPPSFRPKPRKRDCCRICCCTFCIILFILIFIFIVAATLIYFIYQPSPPEFHLGSFRVPNFNITGTPDVSYLDADTVTVVEVKNRNTKMVWHFEQSNVQIWAENGELNLGSTKVAAFDVNVMNMTALKAETKVRGEEVLDAKQRRRLKSVFDSKALTPSVEVKTKTNVIVQGWKSMMIDVTVVCGDVTLKQIQNGDMPHCSFIIFKW 241
BLAST of rna-XM_004494913.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8L497|A0A8B8L497_ABRPR (NDR1/HIN1-like protein 6 OS=Abrus precatorius OX=3816 GN=LOC113862073 PE=4 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 2.635e-84 Identity = 152/245 (62.04%), Postives = 190/245 (77.55%), Query Frame = 0 Query: 4 SSSPPQPKPIILQKPPGYRDPNTAQKPLPPRKAALPPSFRPKPKKRRCCRKCC-CTFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAYLNANTTTMVELKNRNKKIAWHFDQSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRGVELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTLRQLQNGVSPHCSLTILKWIKIR 247 S+PPQ KP+ LQKPPGYRDPN+ PLPPRK LPPSFRPK K+RR C + C CT C+I+L+LIL +V+A + YILY PSLPEFH+ SFRV N+T + D AYL+A+T T VE+KNRN KIAWHFDQS+ + A+NG+LNLGSTKVA F VK + +LK ETKVR LD RQ+R+L V +SKAL P V+V+TRTG+ +QGWNS + +TVVC G+T+RQLQNG +P CS+T+LKWIK+R Sbjct: 2 ESTPPQ-KPM-LQKPPGYRDPNSRPPPLPPRKPVLPPSFRPKHKRRRVCCRICCCTCCVIILILILAVVIAAGLFYILYNPSLPEFHLSSFRVPKLNVTNDGDAAYLDADTATRVEIKNRNAKIAWHFDQSSFEVSAQNGELNLGSTKVAKFKVKEKQVKELKAETKVRNQALDVRQKRKLNGVLESKALTPTVQVRTRTGVGLQGWNSATLPITVVCGGITMRQLQNGDTPRCSVTLLKWIKLR 244
BLAST of rna-XM_004494913.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445FLK0|A0A445FLK0_GLYSO (NDR1/HIN1-like protein 13 OS=Glycine soja OX=3848 GN=D0Y65_052553 PE=4 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 3.425e-84 Identity = 149/247 (60.32%), Postives = 187/247 (75.71%), Query Frame = 0 Query: 1 MESSSSPPQPKPIILQKPPGYRDPNTAQKPLPPRKAALPPSFRPKPKKRRCCRKCCCTFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAYLNANTTTMVELKNRNKKIAWHFDQSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRGVELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTLRQLQNGVSPHCSLTILKWIKIR 247 ME S+ PQPKPI LQKPPGYRDPN+ P PPRK LPPSF+PK K+R CR CCCTFCI++L+L+L+LV+A A+ Y++Y PSLPEFH+GSFRV N+T D AYL A+T VE+KNR+ +++WHF QS + AENGDLNLGSTKVA F VK + T+LK ET V+ + L+ +QRRRLKS +SKAL P VEV+T+TG+ ++GWNS + VTVVC T+RQL G P CS+T+LKWIKIR Sbjct: 1 MEESA--PQPKPI-LQKPPGYRDPNSKPPPPPPRKLMLPPSFQPKRKRRNFCRICCCTFCILILILLLVLVIAAALFYLIYDPSLPEFHLGSFRVPKLNVTNAADGAYLAADTAARVEVKNRSGRMSWHFSQSRFSVSAENGDLNLGSTKVAGFTVKEKGVTELKAETSVKELALNEKQRRRLKSAVESKALVPTVEVRTKTGVGLEGWNSPSISVTVVCGDATVRQLDKGDPPLCSITLLKWIKIR 244
BLAST of rna-XM_004494913.3 vs. UniProtKB/TrEMBL
Match: tr|A0A371HKK3|A0A371HKK3_MUCPR (NDR1/HIN1-like protein 13 (Fragment) OS=Mucuna pruriens OX=157652 GN=NHL13 PE=4 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 1.020e-83 Identity = 141/246 (57.32%), Postives = 182/246 (73.98%), Query Frame = 0 Query: 1 MESSSSPPQ--PKPIILQKPPGYRDPNTAQKPLPPRKAALPPSFRPKPKKRRCCRKCCCTFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAYLNANTTTMVELKNRNKKIAWHFDQSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRGVELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTLRQLQNGVSPHCSLTILKWI 244 ME S+ PQ PKP+ LQKPPGYRDP++ L RKAALPPSFRPKPK+R CCR CCCT CI++L+LIL LV+A + Y++Y PSLPEFH+ SFR+ FN++ D AYL+A+T VE+KNR+ K+ W F +S V I AE G+L+LGST +A F VK + +LK ET+VR L+ RQRRRLKSV +SKAL P +E++T+TG+ +QGWNS + VTVVC VT+RQLQNG P CS+T+ W+ Sbjct: 1 MEQSAPQPQAQPKPM-LQKPPGYRDPDSKSSAL--RKAALPPSFRPKPKRRSCCRICCCTCCIVILVLILALVIAAGLFYLIYNPSLPEFHLSSFRILKFNVSDGSDGAYLDADTAMRVEVKNRSGKMTWRFARSRVSISAEKGELDLGSTNLAGFSVKEKGVAELKAETRVRDRALNERQRRRLKSVVESKALVPTLELRTKTGVALQGWNSPYLSVTVVCGDVTMRQLQNGDPPLCSITLFNWV 243
BLAST of rna-XM_004494913.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TCS3|A0A1S3TCS3_VIGRR (NDR1/HIN1-like protein 13 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106754117 PE=4 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 4.268e-80 Identity = 130/240 (54.17%), Postives = 178/240 (74.17%), Query Frame = 0 Query: 9 QPKPIILQKPPGYRDPNTAQKPLPPRKAALPPSFRPKPKK-RRCCRKCCCTFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAYLNANTTTMVELKNRNKKIAWHFDQSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRGVELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTLRQLQNGVSPHCSLTILKWIKIR 247 QP+P+I QKPP YRDP+ P RKA LPPSF+PKPK+ RR CR CCCTFCII L++ LILV+A A Y+ Y P+LP F + SFRV M N++ ++D AYL+A+TT VE++NR+ K++WHF +S V + A++G+L+LGS+ VA F + + Q+K TKVR + L+ RQRR+LK +SKAL P VE++T+T + +QGW S + VT+VC GVT+R+L+NG P CS+T+LKWIKIR Sbjct: 41 QPRPMI-QKPPAYRDPHFKPPHGPQRKAVLPPSFQPKPKRSRRFCRVCCCTFCIIFLIIFLILVIAAAAFYLFYDPALPAFRLSSFRVPMLNVSNSNDGAYLDADTTARVEVRNRSGKMSWHFGKSKVSVSADDGNLSLGSSTVAGFVAEHKGLAQVKAATKVRKLALEDRQRRKLKGAVESKALTPTVEIQTKTSVGLQGWKSPSIAVTIVCGGVTMRRLENGDPPLCSITLLKWIKIR 279
BLAST of rna-XM_004494913.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3S4V4|A0A0S3S4V4_PHAAN (Late embryogenesis abundant protein LEA-2 subgroup domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G129600 PE=4 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 5.094e-78 Identity = 126/240 (52.50%), Postives = 176/240 (73.33%), Query Frame = 0 Query: 9 QPKPIILQKPPGYRDPNTAQKPLPPRKAALPPSFRPKPKKRRCCRKCCC-TFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAYLNANTTTMVELKNRNKKIAWHFDQSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRGVELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTLRQLQNGVSPHCSLTILKWIKIR 247 QP+P L+KPP YRDP+ P P RKA LPPSF+P+PK+RR + CC TFCII L++ L+LV+A A Y+LY P+LP F + SFRV M N++ +D AYL+A+TT VE++NR+ K++WHF +S V + A++G+L+LGS+ VA F V+ + Q+K TKVR + L+ RQ R+LK +SKAL P VE++T+T + +QGW S + VT+VC GVT+R+L+NG P CS+T+LKWIKIR Sbjct: 53 QPRPR-LEKPPAYRDPHFKPPPGPQRKAVLPPSFQPRPKRRRRFCRVCCCTFCIIFLIIFLVLVIAAAAFYLLYDPALPAFRLSSFRVPMLNVSNGNDGAYLDADTTARVEVRNRSGKMSWHFGKSKVSVSADDGNLSLGSSTVAGFVVEHKGLAQVKAATKVRKLALEDRQMRKLKGKVESKALTPTVEIQTKTSVGLQGWKSPSIAVTIVCGGVTMRRLENGDPPLCSITLLKWIKIR 291
BLAST of rna-XM_004494913.3 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0ETN3|A0A3Q0ETN3_VIGRR (NDR1/HIN1-like protein 13 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106754117 PE=4 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 3.115e-77 Identity = 126/236 (53.39%), Postives = 174/236 (73.73%), Query Frame = 0 Query: 9 QPKPIILQKPPGYRDPNTAQKPLPPRKAALPPSFRPKPKK-RRCCRKCCCTFCIILLLLILILVVAVAVIYILYQPSLPEFHIGSFRVSMFNITVNDDVAYLNANTTTMVELKNRNKKIAWHFDQSNVHILAENGDLNLGSTKVAPFDVKVRNTTQLKVETKVRGVELDARQRRRLKSVFDSKALKPRVEVKTRTGMKVQGWNSMKMDVTVVCDGVTLRQLQNGVSPHCSLTILKW 243 QP+P+I QKPP YRDP+ P RKA LPPSF+PKPK+ RR CR CCCTFCII L++ LILV+A A Y+ Y P+LP F + SFRV M N++ ++D AYL+A+TT VE++NR+ K++WHF +S V + A++G+L+LGS+ VA F + + Q+K TKVR + L+ RQRR+LK +SKAL P VE++T+T + +QGW S + VT+VC GVT+R+L+NG P CS+T+LKW Sbjct: 41 QPRPMI-QKPPAYRDPHFKPPHGPQRKAVLPPSFQPKPKRSRRFCRVCCCTFCIIFLIIFLILVIAAAAFYLFYDPALPAFRLSSFRVPMLNVSNSNDGAYLDADTTARVEVRNRSGKMSWHFGKSKVSVSADDGNLSLGSSTVAGFVAEHKGLAQVKAATKVRKLALEDRQRRKLKGAVESKALTPTVEIQTKTSVGLQGWKSPSIAVTIVCGGVTMRRLENGDPPLCSITLLKW 275 The following BLAST results are available for this feature:
BLAST of rna-XM_004494913.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11) Total hits: 10
BLAST of rna-XM_004494913.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot) Total hits: 3
BLAST of rna-XM_004494913.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_004494913.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004494913.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004494913.3; organism=Cicer arietinum; type=mRNA; length=744bpback to top protein sequence of rna-XM_004494913.3_CaCDCfrontier-NCBI_v1 >rna-XM_004494913.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004494913.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004494913.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=247bpback to top mRNA from alignment at chr3:39333401..39335869+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_004494913.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004494913.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004494913.3; organism=Cicer arietinum; type=mRNA; length=2469bp; location=Sequence derived from: chr3:39333401..39335869+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at chr3:39333401..39335869+ >rna-XM_004494913.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004494913.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004494913.3; organism=Cicer arietinum; type=CDS; length=744bp; location=Sequence derived from: chr3:39333401..39335869+ (Cicer arietinumback to top |