rna-XM_004495039.2
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_004495039.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:3136407-3137430 REVERSE LENGTH=164) HSP 1 Score: 285.419 bits (729), Expect = 4.965e-100 Identity = 132/164 (80.49%), Postives = 150/164 (91.46%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY 164 MPAGHG+R+RTRD F+RPFRKKG I L+TYLRT+ +GDYVD++VNGA+HKGMPHKFYHGRTGR+WNVTKRA+GVEVNKQ+ N+I+RKRIHVRVEHV SRC EEF+LRK KND+LKA AKA GE ISTKR+P+GPKPGF VEG TLETVTPIPYDVVNDLKGGY Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
BLAST of rna-XM_004495039.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:3106549-3107606 FORWARD LENGTH=164) HSP 1 Score: 285.419 bits (729), Expect = 4.965e-100 Identity = 132/164 (80.49%), Postives = 150/164 (91.46%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY 164 MPAGHG+R+RTRD F+RPFRKKG I L+TYLRT+ +GDYVD++VNGA+HKGMPHKFYHGRTGR+WNVTKRA+GVEVNKQ+ N+I+RKRIHVRVEHV SRC EEF+LRK KND+LKA AKA GE ISTKR+P+GPKPGF VEG TLETVTPIPYDVVNDLKGGY Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
BLAST of rna-XM_004495039.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:21430034-21430827 REVERSE LENGTH=164) HSP 1 Score: 283.878 bits (725), Expect = 1.934e-99 Identity = 131/164 (79.88%), Postives = 151/164 (92.07%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY 164 MPAGHG+R+RTRD F+RPFRKKG I L+TYLRT+ +GDYVD++VNGA+HKGMPHKFYHGRTGR+WNVTKRA+GVEVNKQ+ N+I+RKRIHVRVEHV SRC EEF+LRK +ND LKA+AKA+GE ISTKR+P+GPKPGF VEG TLETVTPIPYDVVNDLKGGY Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAKARGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
BLAST of rna-XM_004495039.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:21355567-21356364 FORWARD LENGTH=164) HSP 1 Score: 283.878 bits (725), Expect = 1.934e-99 Identity = 131/164 (79.88%), Postives = 151/164 (92.07%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY 164 MPAGHG+R+RTRD F+RPFRKKG I L+TYLRT+ +GDYVD++VNGA+HKGMPHKFYHGRTGR+WNVTKRA+GVEVNKQ+ N+I+RKRIHVRVEHV SRC EEF+LRK +ND LKA+AKA+GE ISTKR+P+GPKPGF VEG TLETVTPIPYDVVNDLKGGY Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAKARGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
BLAST of rna-XM_004495039.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q43291|RL211_ARATH (Large ribosomal subunit protein eL21z/eL21y OS=Arabidopsis thaliana OX=3702 GN=RPL21A PE=2 SV=2) HSP 1 Score: 285.419 bits (729), Expect = 4.731e-99 Identity = 132/164 (80.49%), Postives = 150/164 (91.46%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY 164 MPAGHG+R+RTRD F+RPFRKKG I L+TYLRT+ +GDYVD++VNGA+HKGMPHKFYHGRTGR+WNVTKRA+GVEVNKQ+ N+I+RKRIHVRVEHV SRC EEF+LRK KND+LKA AKA GE ISTKR+P+GPKPGF VEG TLETVTPIPYDVVNDLKGGY Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
BLAST of rna-XM_004495039.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FDZ9|RL212_ARATH (Large ribosomal subunit protein eL21x/eL21w OS=Arabidopsis thaliana OX=3702 GN=RPL21E PE=2 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 1.843e-98 Identity = 131/164 (79.88%), Postives = 151/164 (92.07%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY 164 MPAGHG+R+RTRD F+RPFRKKG I L+TYLRT+ +GDYVD++VNGA+HKGMPHKFYHGRTGR+WNVTKRA+GVEVNKQ+ N+I+RKRIHVRVEHV SRC EEF+LRK +ND LKA+AKA+GE ISTKR+P+GPKPGF VEG TLETVTPIPYDVVNDLKGGY Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAKARGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
BLAST of rna-XM_004495039.2 vs. UniProtKB/Swiss-Prot
Match: sp|O82574|RL21_CYAPA (Large ribosomal subunit protein eL21 OS=Cyanophora paradoxa OX=2762 GN=RPL21 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 3.824e-51 Identity = 86/158 (54.43%), Postives = 111/158 (70.25%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAK-AKGEVISTKRKPEGPKPG--FKVEGATLETVTPIPYD 155 MP +G R+RTR F+R F+ G + L+TYL + IG+YVD+ N AVHKGMP K+YHGRTG VWNVTKRAIGVE+NK+VR++I++KRIHVR++HV S C + F R +ND++K +A AK V STKR P PK G K +G ET IPY+ Sbjct: 1 MPHSYGYRARTRALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGRTGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKENDKIKHDAHVAKLPVPSTKRLPVLPKAGAIIKSKGQVPETCHAIPYE 158
BLAST of rna-XM_004495039.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q02753|RL21A_YEAST (Large ribosomal subunit protein eL21A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL21A PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.500e-50 Identity = 77/157 (49.04%), Postives = 105/157 (66.88%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPG--FKVEGATLETVTPIPYD 155 M HG RSRTR F R FRK G + L+TYL+ Y +GD VDI+ NG++ KGMPHKFY G+TG V+NVTK ++GV +NK V N+ L KR+++RVEH+ S+C +EF R N +AEAKA+G + KR+P P+ EG +T+ P+PY+ Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
BLAST of rna-XM_004495039.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q12672|RL21B_YEAST (Large ribosomal subunit protein eL21B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL21B PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.453e-49 Identity = 76/157 (48.41%), Postives = 105/157 (66.88%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPG--FKVEGATLETVTPIPYD 155 M HG RSRTR F R FRK G + ++TYL+ Y +GD VDI+ NG++ KGMPHKFY G+TG V+NVTK ++GV +NK V N+ L KR+++RVEH+ S+C +EF R N +AEAKA+G + KR+P P+ EG +T+ P+PY+ Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHMSTYLKIYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
BLAST of rna-XM_004495039.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q54X53|RL21_DICDI (Large ribosomal subunit protein eL21 OS=Dictyostelium discoideum OX=44689 GN=rpl21 PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.017e-49 Identity = 82/159 (51.57%), Postives = 103/159 (64.78%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLE--TVTPIPYDVV 157 MP GLR+RTR FSR FR G + TT+LRT+ +GDYVDI+ G VHKGMPHKFYHGRTGRVWNVT RA+GV +NK+V +I+ K+IHVR EHV PS R +N + EAK G+ + +R P PK GF V E V P+ Y+++ Sbjct: 1 MPHSFGLRARTRYLFSRGFRNHGLLQTTTFLRTFRLGDYVDIKATGNVHKGMPHKFYHGRTGRVWNVTPRAVGVIINKRVGPRIIAKKIHVRTEHVKPSNSMAAHLKRIQENKKAVVEAKKAGKWVDVRRNPAAPKDGFFVNPRNTEFVEVKPVKYELL 159
BLAST of rna-XM_004495039.2 vs. UniProtKB/Swiss-Prot
Match: sp|O42706|RL21B_SCHPO (Large ribosomal subunit protein eL21B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl2102 PE=2 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 1.169e-47 Identity = 76/157 (48.41%), Postives = 108/157 (68.79%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVT--PIPYD 155 MP +G+R+RTR +F R FR+ G I L+TYL+TY +GD VDI+VNGAV KGMPHK+YHG+TG V+NVT+ ++GV + K V N+ + KR++VR+EHV S+C ++F R N+ + EAKA+G+ + +R+P P V E VT P+ YD Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPPATAHFVSTENNEPVTLHPVAYD 157
BLAST of rna-XM_004495039.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9UUC1|RL21A_SCHPO (Large ribosomal subunit protein eL21A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl2101 PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.249e-47 Identity = 76/157 (48.41%), Postives = 108/157 (68.79%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVT--PIPYD 155 MP +G+R+RTR +F R FR+ G I L+TYL+TY +GD VDI+VNGAV KGMPHK+YHG+TG V+NVT+ ++GV + K V N+ + KR++VR+EHV S+C ++F R N+ + EAKA+G+ + +R+P P V E VT P+ YD Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPPAKAHFVSTENNEPVTLHPVAYD 157
BLAST of rna-XM_004495039.2 vs. UniProtKB/Swiss-Prot
Match: sp|P49666|RL21_PIG (Large ribosomal subunit protein eL21 OS=Sus scrofa OX=9823 GN=RPL21 PE=1 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 6.272e-46 Identity = 79/154 (51.30%), Postives = 101/154 (65.58%), Query Frame = 0 Query: 6 GLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPG--FKVEGATLETVTPIPYDVV 157 G R TR FSRPFRK G + L TY+R Y GD VDI+ G V KGMPHK YHG+TGRV+NVT+ A+G+ VNKQV+ KIL KRI+VR+EH+ S+ + F R +NDQ K EAK KG + KR+P P+ + G E + PIPY+ + Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFM 159
BLAST of rna-XM_004495039.2 vs. UniProtKB/Swiss-Prot
Match: sp|P46778|RL21_HUMAN (Large ribosomal subunit protein eL21 OS=Homo sapiens OX=9606 GN=RPL21 PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 6.272e-46 Identity = 79/154 (51.30%), Postives = 101/154 (65.58%), Query Frame = 0 Query: 6 GLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPG--FKVEGATLETVTPIPYDVV 157 G R TR FSRPFRK G + L TY+R Y GD VDI+ G V KGMPHK YHG+TGRV+NVT+ A+G+ VNKQV+ KIL KRI+VR+EH+ S+ + F R +NDQ K EAK KG + KR+P P+ + G E + PIPY+ + Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFM 159
BLAST of rna-XM_004495039.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XVG8|A0A1S2XVG8_CICAR (60S ribosomal protein L21-1-like OS=Cicer arietinum OX=3827 GN=LOC101492631 PE=3 SV=1) HSP 1 Score: 335.88 bits (860), Expect = 1.689e-116 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY 164 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY Sbjct: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY 164
BLAST of rna-XM_004495039.2 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3LGM4|A0A2K3LGM4_TRIPR (60S ribosomal protein l21-1-like OS=Trifolium pratense OX=57577 GN=L195_g033658 PE=3 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 5.074e-115 Identity = 162/164 (98.78%), Postives = 162/164 (98.78%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY 164 MPAGHGLRSRTRDSFSRPFRKKGTIAL TYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGF VEGATLETVTPIPYDVVNDLKGGY Sbjct: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALATYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
BLAST of rna-XM_004495039.2 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MLR7|A0A2Z6MLR7_TRISU (60S ribosomal protein L21 OS=Trifolium subterraneum OX=3900 GN=TSUD_158190 PE=3 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 5.074e-115 Identity = 162/164 (98.78%), Postives = 162/164 (98.78%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY 164 MPAGHGLRSRTRDSFSRPFRKKGTIAL TYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGF VEGATLETVTPIPYDVVNDLKGGY Sbjct: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALATYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
BLAST of rna-XM_004495039.2 vs. UniProtKB/TrEMBL
Match: tr|I3T8M7|I3T8M7_MEDTR (60S ribosomal L21-like protein OS=Medicago truncatula OX=3880 GN=25484261 PE=2 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 5.074e-115 Identity = 162/164 (98.78%), Postives = 162/164 (98.78%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY 164 MPAGHGLRSRTRDSFSRPFRKKGTIAL TYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGF VEGATLETVTPIPYDVVNDLKGGY Sbjct: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALATYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
BLAST of rna-XM_004495039.2 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6LJI0|A0A2Z6LJI0_TRISU (60S ribosomal protein L21 OS=Trifolium subterraneum OX=3900 GN=TSUD_341370 PE=3 SV=1) HSP 1 Score: 331.643 bits (849), Expect = 1.047e-114 Identity = 161/164 (98.17%), Postives = 162/164 (98.78%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY 164 MPAGHGLRSRTRDSFSRPFRKKGTIAL TYLRTYHIGDYVD+RVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGF VEGATLETVTPIPYDVVNDLKGGY Sbjct: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALATYLRTYHIGDYVDVRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
BLAST of rna-XM_004495039.2 vs. UniProtKB/TrEMBL
Match: tr|G8A186|G8A186_MEDTR (60S ribosomal L21-like protein OS=Medicago truncatula OX=3880 GN=25499569 PE=2 SV=1) HSP 1 Score: 331.643 bits (849), Expect = 1.047e-114 Identity = 161/164 (98.17%), Postives = 162/164 (98.78%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY 164 MPAGHGLRSRTRDSFSRPFRKKGTIAL TYLRTYHIGDYVD+RVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGF VEGATLETVTPIPYDVVNDLKGGY Sbjct: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALATYLRTYHIGDYVDVRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
BLAST of rna-XM_004495039.2 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3L910|A0A2K3L910_TRIPR (60S ribosomal protein l21-1-like OS=Trifolium pratense OX=57577 GN=L195_g030953 PE=3 SV=1) HSP 1 Score: 331.257 bits (848), Expect = 1.362e-114 Identity = 160/164 (97.56%), Postives = 162/164 (98.78%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY 164 MPAGHGLRSRTRDSFSRPFRKKGTIAL TYLRTYHIGDYVD+RVNGA+HKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGF VEGATLETVTPIPYDVVNDLKGGY Sbjct: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALATYLRTYHIGDYVDVRVNGAIHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
BLAST of rna-XM_004495039.2 vs. UniProtKB/TrEMBL
Match: tr|B7FH57|B7FH57_MEDTR (60S ribosomal protein L21-1 OS=Medicago truncatula OX=3880 PE=2 SV=1) HSP 1 Score: 331.257 bits (848), Expect = 1.537e-114 Identity = 161/164 (98.17%), Postives = 161/164 (98.17%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY 164 MPAGHGLRSR RDSFSRPFRKKGTIAL TYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGF VEGATLETVTPIPYDVVNDLKGGY Sbjct: 1 MPAGHGLRSRARDSFSRPFRKKGTIALATYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
BLAST of rna-XM_004495039.2 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4XPN1|A0A9D4XPN1_PEA (60S ribosomal protein L21-2 OS=Pisum sativum OX=3888 GN=KIW84_031083 PE=3 SV=1) HSP 1 Score: 331.257 bits (848), Expect = 2.068e-114 Identity = 161/164 (98.17%), Postives = 162/164 (98.78%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY 164 MPAGHGLRSRTRDSFSRPFRKKGTIAL TYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKI ND+LKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY Sbjct: 12 MPAGHGLRSRTRDSFSRPFRKKGTIALATYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKINNDKLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY 175
BLAST of rna-XM_004495039.2 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4XQA0|A0A9D4XQA0_PEA (60S ribosomal protein L21-2, variant 2 OS=Pisum sativum OX=3888 GN=KIW84_031083 PE=3 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 2.437e-114 Identity = 161/164 (98.17%), Postives = 162/164 (98.78%), Query Frame = 0 Query: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY 164 MPAGHGLRSRTRDSFSRPFRKKGTIAL TYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKI ND+LKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY Sbjct: 1 MPAGHGLRSRTRDSFSRPFRKKGTIALATYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKINNDKLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY 164 The following BLAST results are available for this feature:
BLAST of rna-XM_004495039.2 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11) Total hits: 4
BLAST of rna-XM_004495039.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot) Total hits: 10
BLAST of rna-XM_004495039.2 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_004495039.2_CaCDCfrontier-NCBI_v1 ID=rna-XM_004495039.2_CaCDCfrontier-NCBI_v1; Name=rna-XM_004495039.2; organism=Cicer arietinum; type=mRNA; length=495bpback to top protein sequence of rna-XM_004495039.2_CaCDCfrontier-NCBI_v1 >rna-XM_004495039.2_CaCDCfrontier-NCBI_v1 ID=rna-XM_004495039.2_CaCDCfrontier-NCBI_v1; Name=rna-XM_004495039.2_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=164bpback to top mRNA from alignment at chr4:1179225..1180893+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_004495039.2_CaCDCfrontier-NCBI_v1 ID=rna-XM_004495039.2_CaCDCfrontier-NCBI_v1; Name=rna-XM_004495039.2; organism=Cicer arietinum; type=mRNA; length=1669bp; location=Sequence derived from: chr4:1179225..1180893+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at chr4:1179225..1180893+ >rna-XM_004495039.2_CaCDCfrontier-NCBI_v1 ID=rna-XM_004495039.2_CaCDCfrontier-NCBI_v1; Name=rna-XM_004495039.2; organism=Cicer arietinum; type=CDS; length=495bp; location=Sequence derived from: chr4:1179225..1180893+ (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|