rna-XM_004495135.3
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Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_004495135.3 vs. Araport11
Match: | (Symbols: RAB28, ATRAB28 | responsive to abscisic acid 28 | chr3:7969785-7970738 REVERSE LENGTH=262) HSP 1 Score: 251.521 bits (641), Expect = 1.416e-83 Identity = 150/270 (55.56%), Postives = 182/270 (67.41%), Query Frame = 0
Query: 1 MSQE-QPERPKRDEFPEQEPIKYGDVFNVSGELATQPIKPKDAALMQATENQALGQTQKGGPASVMQSAAAVNTAAGLVNREDISDIAKNQGVSVSNMKVGGNRVITESVGSQVLGQFVEPD-------VPMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNART-MPLQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQNSN 261
MSQE QP+RP QEP+ YGDVF VSGELA +PI P+DA +MQA E + G TQKGG A+VMQSAA N G V+ D +D+A +GV+V+ V G RV TE VG QV+GQ+VEP + GL L AITIGEALEA+ + AGNK +DQSDAAAIQAAE+RA G N PGG+ A+AQ+AA NA K L DV++GA KL DKAVTR+DAEGV+ AELRN PN+ T PGGVAAS+ AAA LN+ ++
Sbjct: 1 MSQEEQPKRP-------QEPVTYGDVFEVSGELADKPIAPEDANMMQAAETRVFGHTQKGGAAAVMQSAATANKRGGFVHPGDTTDLAAERGVTVAQTDVPGARVTTEFVGGQVVGQYVEPRPVATAAAMEAEVVGLSLQ-SAITIGEALEAT-VQTAGNKPVDQSDAAAIQAAEVRACGTNVIAPGGIAASAQSAANHNATIDRDEDKIKLIDVLAGATGKLAADKAVTRQDAEGVVSAELRNNPNLSTHPGGVAASITAAARLNERAD 261
BLAST of rna-XM_004495135.3 vs. Araport11
Match: | (Symbols: ATECP31 | LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP31 | chr3:7971920-7972865 REVERSE LENGTH=256) HSP 1 Score: 234.958 bits (598), Expect = 3.203e-77 Identity = 141/263 (53.61%), Postives = 172/263 (65.40%), Query Frame = 0
Query: 1 MSQEQPERPKRDEFPEQEPIKYGDVFNVSGELATQPIKPKDAALMQATENQALGQTQKGGPASVMQSAAAVNTAAGLVNREDISDIAKNQGVSVSNMKVGGNRVITESVGSQVLGQFVEPDVPMNDPGLVLDPEA----ITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNART-MPLQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQ 258
MSQEQP RP+ EP+KYGDVF VSGELA +PI P+DA +MQ+ E G TQKGGPA+VMQSAA N G V+ +D +++ +G +V V V TE VG QV+GQ VEP + D EA ITIGEALEA+ + AGNK +DQSDAAAIQAAEMRA+G N G+ A+AQ+AA NA +K L DV++GA KL D+AVTREDAEGV+ AE+RN P + T PGGVAASL AA LN+
Sbjct: 1 MSQEQPRRPR-------EPVKYGDVFEVSGELADKPIAPEDAKMMQSAETHVFGHTQKGGPAAVMQSAATTNIRGGFVHPDDKTELVAERGATVEQT-VPAATVTTEFVGGQVVGQHVEPRRVV--AAARTDEEALQSTITIGEALEAT-VKTAGNKPVDQSDAAAIQAAEMRASGTNVIALAGVAASAQSAADHNATVDRDERKIKLRDVLTGAAGKLSADRAVTREDAEGVVSAEMRNNPKLCTHPGGVAASLTVAARLNE 252
BLAST of rna-XM_004495135.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:10015883-10016676 REVERSE LENGTH=192) HSP 1 Score: 132.88 bits (333), Expect = 4.396e-38 Identity = 89/160 (55.62%), Postives = 112/160 (70.00%), Query Frame = 0
Query: 104 VITESVGSQVLGQFVEPDV---PMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNART-MPLQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQN 259
V+ E+ G Q G+ + V P+ G ITIGEALEA+ L+ AGNK ++ SDAAAIQAAE+RATGR + PGG+ A+AQ+AAT NAR KTTL DV++GA KLP DKA TR+DAEGV GAE+RN P++ T P GVAAS+AAAA +NQ+
Sbjct: 39 VVAEASGEQAEGEVNQKKVVANPLKSEGT------ITIGEALEAAVLT-AGNKPVEWSDAAAIQAAEVRATGRTNIMPGGVAASAQSAATLNARIGSDDTKTTLADVLTGASSKLPSDKAATRKDAEGVTGAEMRNDPHLTTYPTGVAASVAAAARINQS 191
BLAST of rna-XM_004495135.3 vs. Araport11
Match: | (Symbols: RAB28 | responsive to abscisic acid 28 | chr1:752271-753140 FORWARD LENGTH=182) HSP 1 Score: 123.635 bits (309), Expect = 1.184e-34 Identity = 78/143 (54.55%), Postives = 100/143 (69.93%), Query Frame = 0
Query: 117 FVEPDVPMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNARTMPLQ-KTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQ 258
F +PD + G V + +TIGEALEA+ALS G+K +D+ DAAAIQAAE RATG + PGGL AQAAAT N +T+ + K + D+++ A E+LP DK VT EDAE V+GAELR+ M+TTPGGVA S++A A LNQ
Sbjct: 42 FSQPDPTVATMGSV---DTVTIGEALEATALS-LGDKPVDRRDAAAIQAAETRATGESKGRPGGLAVAAQAAATTNEQTVSEEDKVNIADILTDAAERLPGDKVVTSEDAEAVVGAELRSSSEMKTTPGGVADSMSAGARLNQ 180
BLAST of rna-XM_004495135.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:21604662-21605674 REVERSE LENGTH=176) HSP 1 Score: 88.9669 bits (219), Expect = 1.499e-21 Identity = 59/146 (40.41%), Postives = 84/146 (57.53%), Query Frame = 0
Query: 115 GQFVEPDVPMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNART-MPLQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQN 259
GQFV P ++ L + T+ EAL+A++++ G+K ++ +D AAI+ E RA G + GG+ A A A RN + +KT LGDV++ K+ D+ VT EDAE VI AEL + P PGGVA S+AAA LN +
Sbjct: 28 GQFVGPTEEISTAAEALIGRSTTLTEALKAASMN-VGHKPVETTDVAAIKEVETRAIGGDIESEGGVTAVASKAVARNQKIGKDNEKTNLGDVIAEIDVKVTRDREVTSEDAEAVIRAELNHSPFNNIIPGGVAESVAAAYKLNHD 172
BLAST of rna-XM_004495135.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:21606271-21606750 REVERSE LENGTH=159) HSP 1 Score: 80.4925 bits (197), Expect = 1.905e-18 Identity = 54/124 (43.55%), Postives = 73/124 (58.87%), Query Frame = 0
Query: 137 TIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNART-MPLQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQN 259
T+ EAL+A+A++ G K ++ +D AAI+ E RA G + GG+ A A A RN + +KT LGDV++ K+ D+ VT EDAE VI AEL + P PGGVA S+ AA LN N
Sbjct: 31 TLTEALKAAAIN-VGRKPVETTDLAAIKEVEARAIGGDIESDGGVTAVASKAVARNQKIGEDNEKTNLGDVIAEIDVKVTRDREVTSEDAEAVIRAELNHSPFNNIIPGGVAESVTAAYKLNCN 153
BLAST of rna-XM_004495135.3 vs. Araport11
Match: | (Symbols: RAB28 | responsive to abscisic acid 28 | chr1:752271-752678 FORWARD LENGTH=135) HSP 1 Score: 63.1586 bits (152), Expect = 2.239e-12 Identity = 46/93 (49.46%), Postives = 62/93 (66.67%), Query Frame = 0
Query: 117 FVEPDVPMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNARTMPLQ-KTTLGDVVS 208
F +PD + G V + +TIGEALEA+ALS G+K +D+ DAAAIQAAE RATG + PGGL AQAAAT N +T+ + K + D+++
Sbjct: 42 FSQPDPTVATMGSV---DTVTIGEALEATALS-LGDKPVDRRDAAAIQAAETRATGESKGRPGGLAVAAQAAATTNEQTVSEEDKVNIADILT 130
BLAST of rna-XM_004495135.3 vs. UniProtKB/Swiss-Prot
Match: sp|P09444|LEA34_GOSHI (Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum OX=3635 PE=3 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 1.447e-83 Identity = 156/264 (59.09%), Postives = 190/264 (71.97%), Query Frame = 0
Query: 1 MSQEQPERPKR--DEFPEQEPIKYGDVFNVSGELATQPIKPKDAALMQATENQALGQTQKGGPASVMQSAAAVNTAAGLVNREDISDIAKNQGVSVSNMKVGGNRVITESVGSQVLGQFVEPDVPMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNART-MPLQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQNSN 261
MSQ QP RP++ + QEPIKYGDVFNVSGELA +PI P+DAA+MQ E Q LGQTQKGG A+VMQ+AA N G+V DI+DIA QGV+++ V G R+ITE+V QV+GQ+V+ M V+ AITIGEALEA+A + AG+K +DQSDAAA+QAAE+RATG N PGGL A AQ+AA NA +K L V++GA KLP DKAVTR+DAEGV+ AELRN PN+ T PGGVAAS+AAAA LN+N N
Sbjct: 1 MSQGQPRRPQQPAGQGENQEPIKYGDVFNVSGELANKPIAPQDAAMMQTAETQVLGQTQKGGTAAVMQAAATRNEQVGVVGHNDITDIAGEQGVTLAETDVAGRRIITEAVAGQVVGQYVQATPVMTSQVGVVLQNAITIGEALEATAKT-AGDKPVDQSDAAAVQAAEVRATGSNVIIPGGLAATAQSAAAHNATLDRDEEKIKLNQVLTGATAKLPADKAVTRQDAEGVVSAELRNNPNVATHPGGVAASMAAAARLNENVN 263
BLAST of rna-XM_004495135.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LJ97|LEA31_ARATH (Late embryogenesis abundant protein 31 OS=Arabidopsis thaliana OX=3702 GN=RAB28 PE=1 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 1.352e-82 Identity = 150/270 (55.56%), Postives = 182/270 (67.41%), Query Frame = 0
Query: 1 MSQE-QPERPKRDEFPEQEPIKYGDVFNVSGELATQPIKPKDAALMQATENQALGQTQKGGPASVMQSAAAVNTAAGLVNREDISDIAKNQGVSVSNMKVGGNRVITESVGSQVLGQFVEPD-------VPMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNART-MPLQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQNSN 261
MSQE QP+RP QEP+ YGDVF VSGELA +PI P+DA +MQA E + G TQKGG A+VMQSAA N G V+ D +D+A +GV+V+ V G RV TE VG QV+GQ+VEP + GL L AITIGEALEA+ + AGNK +DQSDAAAIQAAE+RA G N PGG+ A+AQ+AA NA K L DV++GA KL DKAVTR+DAEGV+ AELRN PN+ T PGGVAAS+ AAA LN+ ++
Sbjct: 1 MSQEEQPKRP-------QEPVTYGDVFEVSGELADKPIAPEDANMMQAAETRVFGHTQKGGAAAVMQSAATANKRGGFVHPGDTTDLAAERGVTVAQTDVPGARVTTEFVGGQVVGQYVEPRPVATAAAMEAEVVGLSLQ-SAITIGEALEAT-VQTAGNKPVDQSDAAAIQAAEVRACGTNVIAPGGIAASAQSAANHNATIDRDEDKIKLIDVLAGATGKLAADKAVTRQDAEGVVSAELRNNPNLSTHPGGVAASITAAARLNERAD 261
BLAST of rna-XM_004495135.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LJ95|LEA32_ARATH (Late embryogenesis abundant protein 32 OS=Arabidopsis thaliana OX=3702 GN=ECP31 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.059e-76 Identity = 141/263 (53.61%), Postives = 172/263 (65.40%), Query Frame = 0
Query: 1 MSQEQPERPKRDEFPEQEPIKYGDVFNVSGELATQPIKPKDAALMQATENQALGQTQKGGPASVMQSAAAVNTAAGLVNREDISDIAKNQGVSVSNMKVGGNRVITESVGSQVLGQFVEPDVPMNDPGLVLDPEA----ITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNART-MPLQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQ 258
MSQEQP RP+ EP+KYGDVF VSGELA +PI P+DA +MQ+ E G TQKGGPA+VMQSAA N G V+ +D +++ +G +V V V TE VG QV+GQ VEP + D EA ITIGEALEA+ + AGNK +DQSDAAAIQAAEMRA+G N G+ A+AQ+AA NA +K L DV++GA KL D+AVTREDAEGV+ AE+RN P + T PGGVAASL AA LN+
Sbjct: 1 MSQEQPRRPR-------EPVKYGDVFEVSGELADKPIAPEDAKMMQSAETHVFGHTQKGGPAAVMQSAATTNIRGGFVHPDDKTELVAERGATVEQT-VPAATVTTEFVGGQVVGQHVEPRRVV--AAARTDEEALQSTITIGEALEAT-VKTAGNKPVDQSDAAAIQAAEMRASGTNVIALAGVAASAQSAADHNATVDRDERKIKLRDVLTGAAGKLSADRAVTREDAEGVVSAEMRNNPKLCTHPGGVAASLTVAARLNE 252
BLAST of rna-XM_004495135.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8GWT7|LEA47_ARATH (Late embryogenesis abundant protein 47 OS=Arabidopsis thaliana OX=3702 GN=At5g27980 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.215e-37 Identity = 89/160 (55.62%), Postives = 112/160 (70.00%), Query Frame = 0
Query: 104 VITESVGSQVLGQFVEPDV---PMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNART-MPLQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQN 259
V+ E+ G Q G+ + V P+ G ITIGEALEA+ L+ AGNK ++ SDAAAIQAAE+RATGR + PGG+ A+AQ+AAT NAR KTTL DV++GA KLP DKA TR+DAEGV GAE+RN P++ T P GVAAS+AAAA +NQ+
Sbjct: 39 VVAEASGEQAEGEVNQKKVVANPLKSEGT------ITIGEALEAAVLT-AGNKPVEWSDAAAIQAAEVRATGRTNIMPGGVAASAQSAATLNARIGSDDTKTTLADVLTGASSKLPSDKAATRKDAEGVTGAEMRNDPHLTTYPTGVAASVAAAARINQS 191
BLAST of rna-XM_004495135.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SA57|LEA3_ARATH (Late embryogenesis abundant protein 3 OS=Arabidopsis thaliana OX=3702 GN=At1g03120 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.136e-33 Identity = 78/143 (54.55%), Postives = 100/143 (69.93%), Query Frame = 0
Query: 117 FVEPDVPMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNARTMPLQ-KTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQ 258
F +PD + G V + +TIGEALEA+ALS G+K +D+ DAAAIQAAE RATG + PGGL AQAAAT N +T+ + K + D+++ A E+LP DK VT EDAE V+GAELR+ M+TTPGGVA S++A A LNQ
Sbjct: 42 FSQPDPTVATMGSV---DTVTIGEALEATALS-LGDKPVDRRDAAAIQAAETRATGESKGRPGGLAVAAQAAATTNEQTVSEEDKVNIADILTDAAERLPGDKVVTSEDAEAVVGAELRSSSEMKTTPGGVADSMSAGARLNQ 180
BLAST of rna-XM_004495135.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FK15|LEA49_ARATH (Late embryogenesis abundant protein 49 OS=Arabidopsis thaliana OX=3702 GN=At5g53260 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.443e-20 Identity = 59/146 (40.41%), Postives = 84/146 (57.53%), Query Frame = 0
Query: 115 GQFVEPDVPMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNART-MPLQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQN 259
GQFV P ++ L + T+ EAL+A++++ G+K ++ +D AAI+ E RA G + GG+ A A A RN + +KT LGDV++ K+ D+ VT EDAE VI AEL + P PGGVA S+AAA LN +
Sbjct: 28 GQFVGPTEEISTAAEALIGRSTTLTEALKAASMN-VGHKPVETTDVAAIKEVETRAIGGDIESEGGVTAVASKAVARNQKIGKDNEKTNLGDVIAEIDVKVTRDREVTSEDAEAVIRAELNHSPFNNIIPGGVAESVAAAYKLNHD 172
BLAST of rna-XM_004495135.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FK14|LEA50_ARATH (Late embryogenesis abundant protein 50 OS=Arabidopsis thaliana OX=3702 GN=At5g53270 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.835e-17 Identity = 54/124 (43.55%), Postives = 73/124 (58.87%), Query Frame = 0
Query: 137 TIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNART-MPLQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQN 259
T+ EAL+A+A++ G K ++ +D AAI+ E RA G + GG+ A A A RN + +KT LGDV++ K+ D+ VT EDAE VI AEL + P PGGVA S+ AA LN N
Sbjct: 31 TLTEALKAAAIN-VGRKPVETTDLAAIKEVEARAIGGDIESDGGVTAVASKAVARNQKIGEDNEKTNLGDVIAEIDVKVTRDREVTSEDAEAVIRAELNHSPFNNIIPGGVAESVTAAYKLNCN 153
BLAST of rna-XM_004495135.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XXH2|A0A1S2XXH2_CICAR (Late embryogenesis abundant protein D-34-like OS=Cicer arietinum OX=3827 GN=LOC101501996 PE=3 SV=1) HSP 1 Score: 526.554 bits (1355), Expect = 0.000e+0 Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
Query: 1 MSQEQPERPKRDEFPEQEPIKYGDVFNVSGELATQPIKPKDAALMQATENQALGQTQKGGPASVMQSAAAVNTAAGLVNREDISDIAKNQGVSVSNMKVGGNRVITESVGSQVLGQFVEPDVPMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNARTMPLQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQNSNKW 263
MSQEQPERPKRDEFPEQEPIKYGDVFNVSGELATQPIKPKDAALMQATENQALGQTQKGGPASVMQSAAAVNTAAGLVNREDISDIAKNQGVSVSNMKVGGNRVITESVGSQVLGQFVEPDVPMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNARTMPLQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQNSNKW
Sbjct: 1 MSQEQPERPKRDEFPEQEPIKYGDVFNVSGELATQPIKPKDAALMQATENQALGQTQKGGPASVMQSAAAVNTAAGLVNREDISDIAKNQGVSVSNMKVGGNRVITESVGSQVLGQFVEPDVPMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNARTMPLQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQNSNKW 263
BLAST of rna-XM_004495135.3 vs. UniProtKB/TrEMBL
Match: tr|G7IDP3|G7IDP3_MEDTR (Late embryogenesis abundant D-like protein OS=Medicago truncatula OX=3880 GN=11433278 PE=3 SV=1) HSP 1 Score: 434.106 bits (1115), Expect = 4.531e-152 Identity = 227/261 (86.97%), Postives = 243/261 (93.10%), Query Frame = 0
Query: 1 MSQEQPERPKRDEFPEQEPIKYGDVFNVSGELATQPIKPKDAALMQATENQALGQTQKGGPASVMQSAAAVNTAAGLVNREDISDIAKNQGVSVSNMKVGGNRVITESVGSQVLGQFVEPDVPMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNARTMP-LQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQNS 260
MSQEQP+RP+ ++F EQEPIKYGDVFNVSGELA+QPIKP+DAALMQATENQALGQTQKG PASVMQSAAAVNTAAGLV+ DISDIAKNQG+SVS KVG NRVITESVGSQV+GQFVEPDVPMNDPGLVLD AITIGEALEASALS+AG+K LDQSDAAAIQAAEMRATG+NHTEPGGLGA AQ+AATRN RTMP LQKTTLGDVVSGAREKL DKAVTREDAEGVIGAELRNK +MRT PGGVAAS+AAAATLNQN+
Sbjct: 1 MSQEQPQRPQAEQFSEQEPIKYGDVFNVSGELASQPIKPRDAALMQATENQALGQTQKGSPASVMQSAAAVNTAAGLVSHGDISDIAKNQGMSVSKTKVGANRVITESVGSQVVGQFVEPDVPMNDPGLVLDKNAITIGEALEASALSQAGDKPLDQSDAAAIQAAEMRATGKNHTEPGGLGAIAQSAATRNTRTMPDLQKTTLGDVVSGAREKLGSDKAVTREDAEGVIGAELRNKADMRTKPGGVAASMAAAATLNQNT 261
BLAST of rna-XM_004495135.3 vs. UniProtKB/TrEMBL
Match: tr|A0A7G5VWW0|A0A7G5VWW0_MEDSA (LEA-D34 OS=Medicago sativa OX=3879 PE=2 SV=1) HSP 1 Score: 430.254 bits (1105), Expect = 1.479e-150 Identity = 226/261 (86.59%), Postives = 241/261 (92.34%), Query Frame = 0
Query: 1 MSQEQPERPKRDEFPEQEPIKYGDVFNVSGELATQPIKPKDAALMQATENQALGQTQKGGPASVMQSAAAVNTAAGLVNREDISDIAKNQGVSVSNMKVGGNRVITESVGSQVLGQFVEPDVPMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNARTMP-LQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQNS 260
MSQEQP+RP+ ++F EQEPIKYGDVFNVSGELA+QPIKP+DAALMQATENQALGQTQKG PASVMQSAAAVNTAAGLVN DISDIAKNQG+SVS KVG NRVITESVGSQV+GQFVEPDVPMNDPGLVLD AITIGEALEASALS+AG+K LDQSDAAAIQAAEMRATG+NHTEPGGLGA AQ+AATRN RTMP LQKTTL DVVSGAREKL DK VTREDAEGVIGAELRNK +MRT PGGVAAS+AAAATLNQN+
Sbjct: 1 MSQEQPQRPQAEQFFEQEPIKYGDVFNVSGELASQPIKPRDAALMQATENQALGQTQKGTPASVMQSAAAVNTAAGLVNHGDISDIAKNQGMSVSETKVGANRVITESVGSQVVGQFVEPDVPMNDPGLVLDKNAITIGEALEASALSQAGDKPLDQSDAAAIQAAEMRATGKNHTEPGGLGAIAQSAATRNTRTMPDLQKTTLADVVSGAREKLGSDKTVTREDAEGVIGAELRNKADMRTKPGGVAASMAAAATLNQNT 261
BLAST of rna-XM_004495135.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3LF40|A0A2K3LF40_TRIPR (Late embryogenesis abundant protein D-34 OS=Trifolium pratense OX=57577 GN=L195_g033103 PE=3 SV=1) HSP 1 Score: 428.713 bits (1101), Expect = 6.353e-150 Identity = 221/260 (85.00%), Postives = 242/260 (93.08%), Query Frame = 0
Query: 1 MSQEQPERPKRDEFPEQEPIKYGDVFNVSGELATQPIKPKDAALMQATENQALGQTQKGGPASVMQSAAAVNTAAGLVNREDISDIAKNQGVSVSNMKVGGNRVITESVGSQVLGQFVEPDVPMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNARTMP-LQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQN 259
MSQEQP+RPK ++FP+QEPIKYGDVFNVSGELA+QPIKP+DAALMQATENQALGQTQKG PASVMQSAAAVN A GLVNR+D+SDIAKNQGV+V KVGGNRVITESVGS+++GQFVEPDVPMNDPGLVLDPEAITIGEALEAS L+ AG+K LDQSDAAAIQAAEMRATG+NHTEPGGLGA AQ+AAT+N RTMP QKTTL DVVSGAREKL DKAVTR+DAEGVIGAELRNKP+MRTTPGGVAA++A AATLNQN
Sbjct: 1 MSQEQPQRPKEEQFPKQEPIKYGDVFNVSGELASQPIKPRDAALMQATENQALGQTQKGSPASVMQSAAAVNAAVGLVNRDDMSDIAKNQGVAVFETKVGGNRVITESVGSEIVGQFVEPDVPMNDPGLVLDPEAITIGEALEASGLTPAGDKPLDQSDAAAIQAAEMRATGKNHTEPGGLGAIAQSAATKNTRTMPAFQKTTLADVVSGAREKLGGDKAVTRQDAEGVIGAELRNKPDMRTTPGGVAATVATAATLNQN 260
BLAST of rna-XM_004495135.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4W4F1|A0A9D4W4F1_PEA (SMP domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_061670 PE=3 SV=1) HSP 1 Score: 424.476 bits (1090), Expect = 2.756e-148 Identity = 220/260 (84.62%), Postives = 241/260 (92.69%), Query Frame = 0
Query: 1 MSQEQPERPKRDEFPEQEPIKYGDVFNVSGELATQPIKPKDAALMQATENQALGQTQKGGPASVMQSAAAVNTAAGLVNREDISDIAKNQGVSVSNMKVGGNRVITESVGSQVLGQFVEPDVPMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNARTMP-LQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQN 259
MSQEQP+RP+ D+FPEQ+PIKYGDVF+VSGELA+QPIKP+DAALMQATENQ LGQTQKG PASVMQSAAAVNTA GLV+R+DISDIA+NQGVS+S KVGGNR+ITESVGSQV+GQFVEPDVPMNDPGL LD AITIGEALEASAL+ AG+K LDQSDAAAIQAAEM+ATG+N TEPGGLGA AQ+AATRN RTMP LQKTTL DVVSGAREKL DKAVTREDAEGVIGAELRNK +MRTTPGGVAA++AAAATLNQN
Sbjct: 1 MSQEQPQRPRADQFPEQQPIKYGDVFDVSGELASQPIKPRDAALMQATENQTLGQTQKGSPASVMQSAAAVNTATGLVHRDDISDIARNQGVSISETKVGGNRLITESVGSQVVGQFVEPDVPMNDPGLALDKSAITIGEALEASALTPAGDKPLDQSDAAAIQAAEMKATGKNQTEPGGLGAIAQSAATRNTRTMPDLQKTTLADVVSGAREKLGADKAVTREDAEGVIGAELRNKADMRTTPGGVAATMAAAATLNQN 260
BLAST of rna-XM_004495135.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4W6B4|A0A9D4W6B4_PEA (SMP domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_061670 PE=3 SV=1) HSP 1 Score: 424.476 bits (1090), Expect = 3.119e-148 Identity = 220/264 (83.33%), Postives = 243/264 (92.05%), Query Frame = 0
Query: 1 MSQEQPERPKRDEFPEQEPIKYGDVFNVSGELATQPIKPKDAALMQATENQALGQTQKGGPASVMQSAAAVNTAAGLVNREDISDIAKNQGVSVSNMKVGGNRVITESVGSQVLGQFVEPDVPMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNARTMP-LQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQNSNKW 263
MSQEQP+RP+ D+FPEQ+PIKYGDVF+VSGELA+QPIKP+DAALMQATENQ LGQTQKG PASVMQSAAAVNTA GLV+R+DISDIA+NQGVS+S KVGGNR+ITESVGSQV+GQFVEPDVPMNDPGL LD AITIGEALEASAL+ AG+K LDQSDAAAIQAAEM+ATG+N TEPGGLGA AQ+AATRN RTMP LQKTTL DVVSGAREKL DKAVTREDAEGVIGAELRNK +MRTTPGGVAA++AAAATLNQN ++
Sbjct: 1 MSQEQPQRPRADQFPEQQPIKYGDVFDVSGELASQPIKPRDAALMQATENQTLGQTQKGSPASVMQSAAAVNTATGLVHRDDISDIARNQGVSISETKVGGNRLITESVGSQVVGQFVEPDVPMNDPGLALDKSAITIGEALEASALTPAGDKPLDQSDAAAIQAAEMKATGKNQTEPGGLGAIAQSAATRNTRTMPDLQKTTLADVVSGAREKLGADKAVTREDAEGVIGAELRNKADMRTTPGGVAATMAAAATLNQNKLEF 264
BLAST of rna-XM_004495135.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6PPH0|A0A2Z6PPH0_TRISU (SMP domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_404490 PE=3 SV=1) HSP 1 Score: 421.009 bits (1081), Expect = 5.813e-147 Identity = 218/260 (83.85%), Postives = 241/260 (92.69%), Query Frame = 0
Query: 1 MSQEQPERPKRDEFPEQEPIKYGDVFNVSGELATQPIKPKDAALMQATENQALGQTQKGGPASVMQSAAAVNTAAGLVNREDISDIAKNQGVSVSNMKVGGNRVITESVGSQVLGQFVEPDVPMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNARTMP-LQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQN 259
MSQEQP+RPK ++FP+QEPIKYGDVFNVSGELA+QPIKPKDAALMQA+E++ALGQTQKG PASVMQSAAAVN A GLVNR+D+SDIAKNQGVSVS KVG NRVITESVGSQV+GQF+EPDVPMNDPGLVLDP+AITIGEALEAS L+ AG+K L+QSDAAAIQAAEMRATG+NHTEPGGLGA AQ+AAT+N RT+P LQKTTL DVVSGAREKL DKAVTREDAEGVIGAELRNKP+M T PGGVA ++AAAATLNQN
Sbjct: 1 MSQEQPQRPKAEQFPKQEPIKYGDVFNVSGELASQPIKPKDAALMQASESKALGQTQKGSPASVMQSAAAVNAAVGLVNRDDMSDIAKNQGVSVSETKVGANRVITESVGSQVVGQFIEPDVPMNDPGLVLDPDAITIGEALEASGLTPAGDKPLNQSDAAAIQAAEMRATGKNHTEPGGLGAIAQSAATKNTRTLPALQKTTLADVVSGAREKLGADKAVTREDAEGVIGAELRNKPDMTTMPGGVAETVAAAATLNQN 260
BLAST of rna-XM_004495135.3 vs. UniProtKB/TrEMBL
Match: tr|A0A371I3B7|A0A371I3B7_MUCPR (SMP domain-containing protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_06110 PE=3 SV=1) HSP 1 Score: 392.119 bits (1006), Expect = 7.674e-135 Identity = 204/261 (78.16%), Postives = 231/261 (88.51%), Query Frame = 0
Query: 1 MSQEQPERPKRDEFPEQEPIKYGDVFNVSGELATQPIKPKDAALMQATENQALGQTQKGGPASVMQSAAAVNTAAGLVNREDISDIAKNQGVSVSNMKVGGNRVITESVGSQVLGQFVEPDVPMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNARTMPL-QKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQNS 260
MSQ+Q ERP+R EQ+P+KYGDVFNVSGELA++PI P+DAALMQATENQ +GQTQKGGPASVMQSAA VN AG+V R DISD+AK+QGVSVS KVGGNRVITESVG+ V+GQFVEPDVPM PG L+P+AITIGEALEASA + AG+K +D+SDAAAIQAAEMRAT +N TEPGGLGA AQ+AATRN RTMP+ QKTTL D++S AREKLPEDKAVTREDAEGVIGAELRNK +MRTTPGGVAAS+AAAA+LNQNS
Sbjct: 12 MSQKQSERPQR----EQDPVKYGDVFNVSGELASKPIAPRDAALMQATENQVMGQTQKGGPASVMQSAATVNVGAGIVGRRDISDVAKDQGVSVSEAKVGGNRVITESVGTHVVGQFVEPDVPMTTPGTALEPDAITIGEALEASAFAGAGDKPVDESDAAAIQAAEMRATVKNETEPGGLGAKAQSAATRNTRTMPITQKTTLSDILSDAREKLPEDKAVTREDAEGVIGAELRNKLDMRTTPGGVAASMAAAASLNQNS 268
BLAST of rna-XM_004495135.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8M542|A0A8B8M542_ABRPR (Late embryogenesis abundant protein D-34-like isoform X1 OS=Abrus precatorius OX=3816 GN=LOC113871146 PE=3 SV=1) HSP 1 Score: 377.481 bits (968), Expect = 1.139e-129 Identity = 192/244 (78.69%), Postives = 213/244 (87.30%), Query Frame = 0
Query: 20 IKYGDVFNVSGELATQPIKPKDAALMQATENQALGQTQKGGPASVMQSAAAVNTAAGLVNREDISDIAKNQGVSVSNMKVGGNRVITESVGSQVLGQFVEPDVPMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNARTMPLQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQNSNKW 263
IKYGDVFNVSGELA++PI P+DAALMQATENQA GQTQKGGPA+VMQSAA VNT+AGLV R DISD+A++QGVS+S KVGGNRVITESVG+QV+GQFVEP VPMN PG+ L P+AITIGEALEASA S AG+KA+DQSDAAAIQAAEMRATG+N TEP GLGA AQ+AATRN R + KTTL DV+ AREKLP DK VTREDAEGVIGAELRNK +MRTTP GVA S+AAAATLNQNS W
Sbjct: 13 IKYGDVFNVSGELASKPIAPRDAALMQATENQAFGQTQKGGPAAVMQSAATVNTSAGLVGRRDISDVARDQGVSISETKVGGNRVITESVGTQVVGQFVEPQVPMNSPGMALQPDAITIGEALEASACSGAGDKAVDQSDAAAIQAAEMRATGKNETEPAGLGATAQSAATRNTRDLA-HKTTLSDVLVDAREKLPMDKVVTREDAEGVIGAELRNKLDMRTTPCGVAESMAAAATLNQNS-LW 254
BLAST of rna-XM_004495135.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8M7P3|A0A8B8M7P3_ABRPR (Late embryogenesis abundant protein D-34-like isoform X2 OS=Abrus precatorius OX=3816 GN=LOC113871146 PE=3 SV=1) HSP 1 Score: 377.096 bits (967), Expect = 1.142e-129 Identity = 190/243 (78.19%), Postives = 212/243 (87.24%), Query Frame = 0
Query: 20 IKYGDVFNVSGELATQPIKPKDAALMQATENQALGQTQKGGPASVMQSAAAVNTAAGLVNREDISDIAKNQGVSVSNMKVGGNRVITESVGSQVLGQFVEPDVPMNDPGLVLDPEAITIGEALEASALSRAGNKALDQSDAAAIQAAEMRATGRNHTEPGGLGANAQAAATRNARTMPLQKTTLGDVVSGAREKLPEDKAVTREDAEGVIGAELRNKPNMRTTPGGVAASLAAAATLNQNSNK 262
IKYGDVFNVSGELA++PI P+DAALMQATENQA GQTQKGGPA+VMQSAA VNT+AGLV R DISD+A++QGVS+S KVGGNRVITESVG+QV+GQFVEP VPMN PG+ L P+AITIGEALEASA S AG+KA+DQSDAAAIQAAEMRATG+N TEP GLGA AQ+AATRN R + KTTL DV+ AREKLP DK VTREDAEGVIGAELRNK +MRTTP GVA S+AAAATLNQN +
Sbjct: 13 IKYGDVFNVSGELASKPIAPRDAALMQATENQAFGQTQKGGPAAVMQSAATVNTSAGLVGRRDISDVARDQGVSISETKVGGNRVITESVGTQVVGQFVEPQVPMNSPGMALQPDAITIGEALEASACSGAGDKAVDQSDAAAIQAAEMRATGKNETEPAGLGATAQSAATRNTRDLA-HKTTLSDVLVDAREKLPMDKVVTREDAEGVIGAELRNKLDMRTTPCGVAESMAAAATLNQNRRR 254 The following BLAST results are available for this feature:
BLAST of rna-XM_004495135.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11) Total hits: 7
BLAST of rna-XM_004495135.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot) Total hits: 7
BLAST of rna-XM_004495135.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_004495135.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004495135.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004495135.3; organism=Cicer arietinum; type=mRNA; length=792bpback to top protein sequence of rna-XM_004495135.3_CaCDCfrontier-NCBI_v1 >rna-XM_004495135.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004495135.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004495135.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=263bpback to top mRNA from alignment at chr4:1988091..1989419+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_004495135.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004495135.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004495135.3; organism=Cicer arietinum; type=mRNA; length=1329bp; location=Sequence derived from: chr4:1988091..1989419+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at chr4:1988091..1989419+ >rna-XM_004495135.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004495135.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004495135.3; organism=Cicer arietinum; type=CDS; length=792bp; location=Sequence derived from: chr4:1988091..1989419+ (Cicer arietinumback to top |