rna-XM_004495198.3
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-XM_004495198.3 vs. Araport11
Match: | (Symbols: MYB79, AtMYB79 | myb domain protein 79 | chr4:7836675-7837653 FORWARD LENGTH=261) HSP 1 Score: 243.432 bits (620), Expect = 1.751e-80 Identity = 141/263 (53.61%), Postives = 179/263 (68.06%), Query Frame = 0 Query: 17 EDGWRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKTKKVSLRKQNQQQIKQQQQI-QQQQQIQYNFDMKGILELLEENEYSVPSTSQETQEMVTMCPE----TTEQHGYFYSMLN-------GNCNVYADESSNEE-ILWDGLWNLDDVLGNSMQLMLQA--------KPTNVHNLVTPFC 258 E+ WRKGPWT+EED+LLIEYV++HGEGRWNSV+ LAGL+RNGKSCRLRWVNYLRPDLK+GQITP EESIILELHA+WGNRWSTIAR+LPGRTDNEIKNYWRTHFKKKAK T + A+K K L++ Q K+Q++I QQ+Q + FD G+ +++ E + S+S + V P+ +++ GY + L N+ + NE+ +WDG WN+D V G+ L + A KP HNLV PFC Sbjct: 3 EEVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKPTTNNAEKIKSRLLKR---QHFKEQREIELQQEQQLFQFDQLGMKKIISLLEENNSSSSSDGGGDVFYYPDQITHSSKPFGYNSNSLEEQLQGRFSPVNIPDANTMNEDNAIWDGFWNMDVVNGHGGNLGVVAATAACGPRKPY-FHNLVIPFC 261
BLAST of rna-XM_004495198.3 vs. Araport11
Match: | (Symbols: MYB305, ATMYB71 | myb domain protein 305, MYB DOMAIN PROTEIN 71 | chr3:8811336-8812330 REVERSE LENGTH=269) HSP 1 Score: 242.276 bits (617), Expect = 6.796e-80 Identity = 139/255 (54.51%), Postives = 175/255 (68.63%), Query Frame = 0 Query: 17 EDGWRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKTKKVSLRKQNQQQIKQQQQIQQQQQIQYN-FDMKGILELLEENEYSVPSTSQETQEMVTMCPETTEQ--HGYFYSMLNGNCNVY--------ADESSNEE-ILWDGLWNLD-DVLGNSMQLMLQAKPTNVHNLVTPFC 258 E+GWRKGPWT+EED+LLI+YV+LHGEGRWNSVA LAGL+RNGKSCRLRWVNYLRPDLK+GQITP EE+IILELHA+WGNRWSTIAR+LPGRTDNEIKNYWRTHFKKK K ++A+KTK L++Q QQ +Q + Q+QQ +Q+N DMK I+ LL+++ + +T + + Q H S N N Y + + NE+ +WDGLWNLD + G+ + N+V PFC Sbjct: 15 EEGWRKGPWTAEEDRLLIDYVQLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEETIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKTKSPTNSAEKTKNRILKRQQFQQQRQMELQQEQQLLQFNQIDMKKIMSLLDDDNNNGDNTFSSSSSGESGALYVPHQITHSTTTSGCEPNSNGYYPVVPVTIPEANVNEDNAIWDGLWNLDFEGQGSFGGAACAPRKHYFQNMVIPFC 269
BLAST of rna-XM_004495198.3 vs. Araport11
Match: | (Symbols: MYB121, ATMYB121 | myb domain protein 121 | chr3:11838567-11840313 FORWARD LENGTH=276) HSP 1 Score: 202.986 bits (515), Expect = 1.704e-64 Identity = 112/218 (51.38%), Postives = 140/218 (64.22%), Query Frame = 0 Query: 19 GWRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKTKKVSLRKQNQQQIKQQQQIQQQQQIQYNFDMKGILELLEENEYSVPSTSQETQEMVT---MCPETTEQHGYFYSMLNGNCNVYADESSNEEILWDGLWNLDD 233 G RKGPWT EEDKLL EYV HGEGRW++VA AGL R+GKSCRLRWVNYLRP LK+GQITPQEE IILELH+ WGN+WSTIAR LPGRTDNEIKNYWRTH+KK +K++ DK KK RKQ Q +K Q Q Q + Q + + + +N++++ S+ + P++ +SM+ +E LW LWNLD+ Sbjct: 26 GCRKGPWTLEEDKLLAEYVTSHGEGRWSTVAKCAGLNRSGKSCRLRWVNYLRPGLKRGQITPQEEGIILELHSLWGNKWSTIARYLPGRTDNEIKNYWRTHYKKN-QKSSSKQDKVKKSLSRKQQQVDLKPQPQAQSENH-QSQLVSQDHMNI--DNDHNIASSLYYPTSVFDDKLYMPQSVATTSSDHSMI------------DEGHLWGSLWNLDE 227
BLAST of rna-XM_004495198.3 vs. Araport11
Match: | (Symbols: MYB48, ATMYB48, ATMYB48-3, ATMYB48-2, ATMYB48-1 | myb domain protein 48 | chr3:16945427-16946376 FORWARD LENGTH=258) HSP 1 Score: 172.555 bits (436), Expect = 7.952e-53 Identity = 76/121 (62.81%), Postives = 97/121 (80.17%), Query Frame = 0 Query: 14 VIEEDGWRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKT 134 +++E+G RKGPWT +ED LL+ +V L G+ RW+ +A ++GL R GKSCRLRWVNYL P LK+G++TPQEE ++LELHA+WGNRWS IAR LPGRTDNEIKNYWRTH +KKA++ T Sbjct: 3 MMQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSPT 123
BLAST of rna-XM_004495198.3 vs. Araport11
Match: | (Symbols: MYB21, ATMYB21, ATMYB3 | ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 3, myb domain protein 21 | chr3:10307596-10310093 FORWARD LENGTH=226) HSP 1 Score: 171.014 bits (432), Expect = 1.533e-52 Identity = 77/130 (59.23%), Postives = 99/130 (76.15%), Query Frame = 0 Query: 21 RKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKTKKVSLRKQNQQQIKQQ 150 RKGPWT EED +LI Y+ HG+G WNS+A AGL+R GKSCRLRW+NYLRPD+++G ITP+E+ II+ELHA+WGNRWS IA++LPGRTDNEIKN+WRT +K K+ +D T S+ + +I Q Sbjct: 21 RKGPWTMEEDLILINYIANHGDGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLIIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKYIKQ----SDVTTTSSVGSHHSSEINDQ 146
BLAST of rna-XM_004495198.3 vs. Araport11
Match: | (Symbols: ATMYB59-1, MYB59, ATMYB59, ATMYB59-3, ATMYB59-2 | MYB DOMAIN PROTEIN 59, myb domain protein 59 | chr5:24082425-24083350 REVERSE LENGTH=235) HSP 1 Score: 169.474 bits (428), Expect = 7.637e-52 Identity = 74/107 (69.16%), Postives = 91/107 (85.05%), Query Frame = 0 Query: 20 WRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKK 126 +RKGPWT +ED LL+ +V L G+ RW+ VA ++GL R GKSCRLRWVNYL P LK+G++TPQEE ++LELHA+WGNRWS IAR LPGRTDNEIKNYWRTH +KKA++ Sbjct: 8 YRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQE 114
BLAST of rna-XM_004495198.3 vs. Araport11
Match: | (Symbols: MYB112, AtMYB112 | myb domain protein 112 | chr1:17704269-17706377 REVERSE LENGTH=243) HSP 1 Score: 167.548 bits (423), Expect = 4.419e-51 Identity = 74/105 (70.48%), Postives = 89/105 (84.76%), Query Frame = 0 Query: 21 RKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAK 125 R+GPWT EED L+ Y+ LHGEGRWNS++ AGL R GKSCRLRW+NYLRPD+++G I+ QE+ IILELH+RWGNRWS IA++LPGRTDNEIKNYWRT +K AK Sbjct: 33 RRGPWTVEEDMKLVSYISLHGEGRWNSLSRSAGLNRTGKSCRLRWLNYLRPDIRRGDISLQEQFIILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAK 137
BLAST of rna-XM_004495198.3 vs. Araport11
Match: | (Symbols: AtMYB24, MYB24 | myb domain protein 24 | chr5:16138703-16140946 REVERSE LENGTH=214) HSP 1 Score: 166.777 bits (421), Expect = 4.731e-51 Identity = 72/111 (64.86%), Postives = 90/111 (81.08%), Query Frame = 0 Query: 21 RKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAA 131 RKGPWT EED +LI Y+ HGEG WNS+A AGL+R GKSCRLRW+NYLRPD+++G ITP+E+ I+ELHA+WGNRWS IA++LPGRTDNEIKN+WRT +K K+ + Sbjct: 18 RKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLTIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTKIQKYIIKSGETT 128
BLAST of rna-XM_004495198.3 vs. Araport11
Match: | (Symbols: BW62B, BW62C, AtMYB62, MYB62 | myb domain protein 62 | chr1:25603842-25604884 FORWARD LENGTH=286) HSP 1 Score: 166.007 bits (419), Expect = 6.698e-50 Identity = 71/106 (66.98%), Postives = 90/106 (84.91%), Query Frame = 0 Query: 21 RKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKK 126 R+GPWT EED LL Y+ +GEGRWN VA AGL+R GKSCRLRW+NYL+PD+++G +TPQE+ +ILELH++WGNRWS IA+ LPGRTDNEIKNYWRT +K+A++ Sbjct: 20 RRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTGKSCRLRWLNYLKPDIRRGNLTPQEQLLILELHSKWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQARQ 125
BLAST of rna-XM_004495198.3 vs. Araport11
Match: | (Symbols: AtMYB116, MYB116 | myb domain protein 116 | chr1:8885210-8886271 FORWARD LENGTH=283) HSP 1 Score: 162.54 bits (410), Expect = 1.227e-48 Identity = 69/106 (65.09%), Postives = 90/106 (84.91%), Query Frame = 0 Query: 21 RKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKK 126 RKGPWT EED LL Y+ +GEGRWN +A +GL+R GKSCRLRW+NYL+PD+K+G +TPQE+ +ILELH++WGNRWS I++ LPGRTDN+IKNYWRT +K+A++ Sbjct: 19 RKGPWTLEEDTLLTNYISHNGEGRWNLLAKSSGLKRAGKSCRLRWLNYLKPDIKRGNLTPQEQLLILELHSKWGNRWSKISKYLPGRTDNDIKNYWRTRVQKQARQ 124
BLAST of rna-XM_004495198.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q10MB4|MYB2_ORYSJ (Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.712e-52 Identity = 77/106 (72.64%), Postives = 92/106 (86.79%), Query Frame = 0 Query: 21 RKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKK 126 R+GPWT EED LL+ Y+ HGEGRWNS+A AGL+R GKSCRLRW+NYLRPDL++G ITPQE+ +ILELH+RWGNRWS IA++LPGRTDNEIKNYWRT +K AK+ Sbjct: 21 RRGPWTVEEDLLLVNYIAAHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDLRRGNITPQEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQ 126
BLAST of rna-XM_004495198.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LX82|MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 8.371e-52 Identity = 76/121 (62.81%), Postives = 97/121 (80.17%), Query Frame = 0 Query: 14 VIEEDGWRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKT 134 +++E+G RKGPWT +ED LL+ +V L G+ RW+ +A ++GL R GKSCRLRWVNYL P LK+G++TPQEE ++LELHA+WGNRWS IAR LPGRTDNEIKNYWRTH +KKA++ T Sbjct: 1 MMQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSPT 121
BLAST of rna-XM_004495198.3 vs. UniProtKB/Swiss-Prot
Match: sp|L7R9Z0|EOBI_PETHY (MYB-like transcription factor EOBI OS=Petunia hybrida OX=4102 GN=EOBI PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 9.259e-52 Identity = 82/136 (60.29%), Postives = 103/136 (75.74%), Query Frame = 0 Query: 11 RWCVIEEDGWRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKTKKVSLRKQNQQQ 146 R C ++ RKGPWT EED +LI Y+ HGEG WNS+A AGL+R GKSCRLRW+NYLRPD+++G ITP+E+ +I+ELHA+WGNRWS IA++LPGRTDNEIKNYWRT +K K+ A KK S +QN Q+ Sbjct: 4 RTCNSQDVEVRKGPWTMEEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHIKQ---ADQNMKKPSKCEQNDQK 136
BLAST of rna-XM_004495198.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LK95|MYB21_ARATH (Transcription factor MYB21 OS=Arabidopsis thaliana OX=3702 GN=MYB21 PE=1 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 1.467e-51 Identity = 77/130 (59.23%), Postives = 99/130 (76.15%), Query Frame = 0 Query: 21 RKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKTKKVSLRKQNQQQIKQQ 150 RKGPWT EED +LI Y+ HG+G WNS+A AGL+R GKSCRLRW+NYLRPD+++G ITP+E+ II+ELHA+WGNRWS IA++LPGRTDNEIKN+WRT +K K+ +D T S+ + +I Q Sbjct: 21 RKGPWTMEEDLILINYIANHGDGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLIIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKYIKQ----SDVTTTSSVGSHHSSEINDQ 146
BLAST of rna-XM_004495198.3 vs. UniProtKB/Swiss-Prot
Match: sp|E0CJS3|EOBII_PETHY (MYB-like transcription factor EOBII OS=Petunia hybrida OX=4102 GN=EOBII PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.987e-51 Identity = 74/115 (64.35%), Postives = 93/115 (80.87%), Query Frame = 0 Query: 13 CVIEEDGWRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKT 127 C ++ RKGPWT EED +LI Y+ HGEG WNS+A AGL+R GKSCRLRW+NYLRPD+++G ITP+E+ +I+ELHA+WGNRWS IA++LPGRTDNEIKNYWRT +K K+ Sbjct: 6 CNSQDAEVRKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHIKQA 120
BLAST of rna-XM_004495198.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q4JL84|MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 7.315e-51 Identity = 74/107 (69.16%), Postives = 91/107 (85.05%), Query Frame = 0 Query: 20 WRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKK 126 +RKGPWT +ED LL+ +V L G+ RW+ VA ++GL R GKSCRLRWVNYL P LK+G++TPQEE ++LELHA+WGNRWS IAR LPGRTDNEIKNYWRTH +KKA++ Sbjct: 8 YRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQE 114
BLAST of rna-XM_004495198.3 vs. UniProtKB/Swiss-Prot
Match: sp|P81391|MYB05_ANTMA (Myb-related protein 305 OS=Antirrhinum majus OX=4151 GN=MYB305 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.263e-50 Identity = 73/114 (64.04%), Postives = 92/114 (80.70%), Query Frame = 0 Query: 21 RKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKT 134 RKGPWT EED +LI Y+ HGEG WNS+A AGL+R GKSCRLRW+NYLRPD+++G ITP+E+ +I+ELHA+WGNRWS IA+ LPGRTDNEIKNYWRT +K ++ ++ T Sbjct: 14 RKGPWTMEEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKTLPGRTDNEIKNYWRTRIQKHMEQGDQSSSTT 127
BLAST of rna-XM_004495198.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SPG9|MYB24_ARATH (Transcription factor MYB24 OS=Arabidopsis thaliana OX=3702 GN=MYB24 PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 4.528e-50 Identity = 72/111 (64.86%), Postives = 90/111 (81.08%), Query Frame = 0 Query: 21 RKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAA 131 RKGPWT EED +LI Y+ HGEG WNS+A AGL+R GKSCRLRW+NYLRPD+++G ITP+E+ I+ELHA+WGNRWS IA++LPGRTDNEIKN+WRT +K K+ + Sbjct: 18 RKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLTIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTKIQKYIIKSGETT 128
BLAST of rna-XM_004495198.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9C9G7|MYB62_ARATH (Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 6.430e-49 Identity = 71/106 (66.98%), Postives = 90/106 (84.91%), Query Frame = 0 Query: 21 RKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKK 126 R+GPWT EED LL Y+ +GEGRWN VA AGL+R GKSCRLRW+NYL+PD+++G +TPQE+ +ILELH++WGNRWS IA+ LPGRTDNEIKNYWRT +K+A++ Sbjct: 20 RRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTGKSCRLRWLNYLKPDIRRGNLTPQEQLLILELHSKWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQARQ 125
BLAST of rna-XM_004495198.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q2QZJ8|JAMYB_ORYSJ (Transcription factor JAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=JAMYB PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.357e-48 Identity = 71/106 (66.98%), Postives = 89/106 (83.96%), Query Frame = 0 Query: 21 RKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKK 126 R+GPWT +ED LI Y+ HGEGRWN++A AGL+R GKSCRLRW+NYLRPD+K+G T +E+ +IL+LH+RWGNRWS IA++LPGRTDNEIKNYWRT +K AK+ Sbjct: 30 RRGPWTVDEDLTLINYISDHGEGRWNALARAAGLKRTGKSCRLRWLNYLRPDVKRGNFTAEEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQ 135
BLAST of rna-XM_004495198.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XVQ4|A0A1S2XVQ4_CICAR (Transcription factor WER-like OS=Cicer arietinum OX=3827 GN=LOC101493405 PE=4 SV=1) HSP 1 Score: 538.88 bits (1387), Expect = 0.000e+0 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0 Query: 1 MYSGVIEGNTRWCVIEEDGWRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKTKKVSLRKQNQQQIKQQQQIQQQQQIQYNFDMKGILELLEENEYSVPSTSQETQEMVTMCPETTEQHGYFYSMLNGNCNVYADESSNEEILWDGLWNLDDVLGNSMQLMLQAKPTNVHNLVTPFC 258 MYSGVIEGNTRWCVIEEDGWRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKTKKVSLRKQNQQQIKQQQQIQQQQQIQYNFDMKGILELLEENEYSVPSTSQETQEMVTMCPETTEQHGYFYSMLNGNCNVYADESSNEEILWDGLWNLDDVLGNSMQLMLQAKPTNVHNLVTPFC Sbjct: 1 MYSGVIEGNTRWCVIEEDGWRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKTKKVSLRKQNQQQIKQQQQIQQQQQIQYNFDMKGILELLEENEYSVPSTSQETQEMVTMCPETTEQHGYFYSMLNGNCNVYADESSNEEILWDGLWNLDDVLGNSMQLMLQAKPTNVHNLVTPFC 258
BLAST of rna-XM_004495198.3 vs. UniProtKB/TrEMBL
Match: tr|A0A896WC95|A0A896WC95_MELAB (MYB family transcription factor OS=Melilotus albus OX=47082 GN=EVM0004174.1 PE=4 SV=1) HSP 1 Score: 404.445 bits (1038), Expect = 2.117e-140 Identity = 219/260 (84.23%), Postives = 232/260 (89.23%), Query Frame = 0 Query: 1 MYSGVIEGNTRWCVIEEDGWRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKTKKVSLRKQNQQQIKQQQQIQQQQQIQYNFDMKGILE-LLEENE-YSVPSTSQETQEMVTMCPETTEQHGYFYSMLNGNCNVYADESSNEEILWDGLWNLDDVLGNSMQLMLQAKPTNVHNLVTPFC 258 M+SGVIEGNT W VIEED WRKGPWT+EEDKLLIEYVK HGEGRWNSVA LAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIAR+LPGRTDNEIKNYWRTHFKKK KKT+DAA+K K S ++Q QQQ+K QQQ QQQQQ+QYN DMKGI++ LLEEN+ YSVPSTSQETQEMVTM ET EQ G Y MLNG NVYA ESSNEEILWDGLWN+DDVLGNSMQLMLQAKP NVHNL TPFC Sbjct: 1 MFSGVIEGNTGWSVIEEDKWRKGPWTTEEDKLLIEYVKQHGEGRWNSVARLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKTKKTSDAAEKAKNRSFKRQQQQQLKHQQQFQQQQQLQYNLDMKGIIDLLLEENDYYSVPSTSQETQEMVTMYGETPEQQGLVYPMLNGYGNVYAQESSNEEILWDGLWNMDDVLGNSMQLMLQAKPANVHNLATPFC 260
BLAST of rna-XM_004495198.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4WAE1|A0A9D4WAE1_PEA (Uncharacterized protein OS=Pisum sativum OX=3888 GN=KIW84_063773 PE=4 SV=1) HSP 1 Score: 402.134 bits (1032), Expect = 1.952e-139 Identity = 213/263 (80.99%), Postives = 229/263 (87.07%), Query Frame = 0 Query: 1 MYSGVIEGNTRWCVIEEDGWRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKTKKVSLRKQNQQQIKQQQQIQQQQQIQYNFDMKGILELL--EENEYSVPSTSQETQEMVTMCPETTEQHGYFYSML--NGNCNVYADESSNEEILWDGLWNLDDVLGNSMQ-LMLQAKPTNVHNLVTPFC 258 MYSGV+E NT W V+EED WRKGPWTSEEDKLLIEYVKLHGEGRWNSVA L GLRRNGKSCRLRWVNYLRPDLKKGQIT QEESIILELHARWGNRWSTIAR+LPGRTDNEIKNYWRTHFKKK KK +DAA++ K S ++Q QQ +QQ QIQQQQQ+QYN DMKGI++LL E + YSVPSTSQE+QEMVT+ ET EQ GY YSML NGN NVYA ESSNEEILWDGLWNLDDVLGNSMQ +MLQAK NVHNLVTPFC Sbjct: 1 MYSGVMERNTEWSVVEEDRWRKGPWTSEEDKLLIEYVKLHGEGRWNSVARLTGLRRNGKSCRLRWVNYLRPDLKKGQITQQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKTKKPSDAAERAKNRSFKRQQQQLKQQQHQIQQQQQLQYNLDMKGIIDLLLDENDYYSVPSTSQESQEMVTIYSETPEQQGYSYSMLNGNGNGNVYAQESSNEEILWDGLWNLDDVLGNSMQPMMLQAKTANVHNLVTPFC 263
BLAST of rna-XM_004495198.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3N3G6|A0A2K3N3G6_TRIPR (Transcription factor MYB 48-like protein OS=Trifolium pratense OX=57577 GN=L195_g020787 PE=4 SV=1) HSP 1 Score: 398.667 bits (1023), Expect = 3.200e-138 Identity = 209/256 (81.64%), Postives = 226/256 (88.28%), Query Frame = 0 Query: 6 IEGNTRWCVIEEDGWRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKTKKVSLRKQNQQQIKQQQQIQQQQQIQYNFDMKGILE-LLEENE-YSVPSTSQETQEMVTMCPETTEQHGYFYSMLN-GNCNVYADESSNEEILWDGLWNLDDVLGNSMQLMLQAKPTNVHNLVTPFC 258 +EGNTRW VIEED WRKGPWTSEEDKLLIEYVKLHGEGRWNSV+ L GLRRNGKSCRLRWVNYLRPDLKKG ITPQEE+IILELHARWGNRWSTIAR+LPGRTDNEIKNYWRTHFKKK K +D A+K KK S ++Q QQQ+K QQQ QQQQ Q+N DMKGI++ LL+ENE Y+VPSTSQETQEMV+M +T EQ GYF SM+N N NVYA ESSNEEILWDGLWNLDDVLGNSMQLMLQAKP NVHNLVTPFC Sbjct: 1 MEGNTRWSVIEEDRWRKGPWTSEEDKLLIEYVKLHGEGRWNSVSRLTGLRRNGKSCRLRWVNYLRPDLKKGHITPQEETIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKTKSPSDDAEKAKKRSFKRQQQQQLKHQQQQIQQQQFQFNLDMKGIIDLLLDENEYYNVPSTSQETQEMVSMYADTPEQKGYFDSMVNDNNGNVYAQESSNEEILWDGLWNLDDVLGNSMQLMLQAKPANVHNLVTPFC 256
BLAST of rna-XM_004495198.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8T9IRY9|A0A8T9IRY9_MEDSA (R2R3-MYB transcription factor OS=Medicago sativa OX=3879 GN=MYB741 PE=2 SV=1) HSP 1 Score: 392.119 bits (1006), Expect = 1.383e-135 Identity = 207/264 (78.41%), Postives = 226/264 (85.61%), Query Frame = 0 Query: 1 MYSGVIEGNTRWCVIEEDGWRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKTKKVSLRK--QNQQQIKQQQQIQQQQQIQYNFDMKGILE-LLEENEY--SVPSTSQETQEMVTMCPETTEQHGYFYSMLNGNC-NVYADESSNEEILWDGLWNLDDVLGNSMQLMLQAKPTNVHNLVTPFC 258 MYSG++EGNT W V+EED WRKGPWTSEEDKLLIEYVKLHGEGRWNSV+ LAGLRRNGKSCRLRWVNYLRPDLK+GQIT QEESIILELHARWGNRWSTIAR+LPGRTDNEIKNYWRTHFKKK K +DAA+K K S ++ Q Q + +QQQ QQQQ+QYN DMKGI++ LLEEN+Y SVPSTSQETQEMV+M +T EQ G FYSMLN N NVYA ESSNEE LWD LWNLDD LGNSMQLMLQAKP NVHN+V PFC Sbjct: 1 MYSGMMEGNTGWSVMEEDRWRKGPWTSEEDKLLIEYVKLHGEGRWNSVSRLAGLRRNGKSCRLRWVNYLRPDLKRGQITQQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKTKNPSDAAEKAKNRSFKRQQQQQLKKQQQQVQMQQQQLQYNMDMKGIIDLLLEENDYCTSVPSTSQETQEMVSMYADTQEQQGCFYSMLNDNSGNVYAQESSNEENLWDELWNLDDALGNSMQLMLQAKPANVHNVVAPFC 264
BLAST of rna-XM_004495198.3 vs. UniProtKB/TrEMBL
Match: tr|G7I2P4|G7I2P4_MEDTR (Myb transcription factor OS=Medicago truncatula OX=3880 GN=11431201 PE=4 SV=1) HSP 1 Score: 378.637 bits (971), Expect = 3.191e-130 Identity = 204/256 (79.69%), Postives = 219/256 (85.55%), Query Frame = 0 Query: 1 MYSGVIEGNTRWCVIEEDGWRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKTKKVSLRK--QNQQQIKQQQQIQQQQQIQYNFDMKGILE-LLEENEY--SVPSTSQETQEMVTMCPETTEQHGYFYSMLN-GNCNVYADESSNEEILWDGLWNLDDVLGNSMQLMLQAKPTNV 250 MYSG++EGNT W VIEED WRKGPWTSEEDKLLIEYVKLHGEGRWNSV+ LAGLRRNGKSCRLRWVNYLRPDLKKGQIT QEESIILELHARWGNRWSTIAR+LPGRTDNEIKNYWRTHFKKK K DAA+K K ++ Q Q + +QQQ QQQQ+QYN DMKGI++ LLEEN+Y SVPSTSQETQEMV+M +T EQ G FYSMLN N NVYA ESSNEEILWDGLWNLDD LGNSMQLMLQAKP NV Sbjct: 1 MYSGMMEGNTGWSVIEEDRWRKGPWTSEEDKLLIEYVKLHGEGRWNSVSRLAGLRRNGKSCRLRWVNYLRPDLKKGQITQQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKNKNPTDAAEKAKNRYFKRQQQQQLKKQQQQVQMQQQQLQYNMDMKGIIDLLLEENDYCTSVPSTSQETQEMVSMYADTQEQQGCFYSMLNDNNGNVYAHESSNEEILWDGLWNLDDALGNSMQLMLQAKPANV 256
BLAST of rna-XM_004495198.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8MBY8|A0A8B8MBY8_ABRPR (Myb-related protein 305-like OS=Abrus precatorius OX=3816 GN=LOC113871724 PE=4 SV=1) HSP 1 Score: 369.777 bits (948), Expect = 1.134e-126 Identity = 193/264 (73.11%), Postives = 214/264 (81.06%), Query Frame = 0 Query: 1 MYSGVIEGNTRWCVIEEDGWRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKTKKVSLRKQN-------QQQIKQQQQIQQQQQIQYNFDMKGILELLEENEYSVPSTSQETQEMVTMCPETTEQHGYFYSMLNGNCNVYADESSNEEILWDGLWNLDDVLGNSMQLMLQAKPTNVHNLVTPF 257 MY GV+ GN W IEEDGWRKGPWT+EEDKLLI+YV+LHGEGRWNSVA LAGL+RNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIAR+LPGRTDNEIKNYWRTHFKKKAK +DAA K K S R+Q +Q QQQ+++QQQQ+Q+N DMKGI+ LLEEN++ VPS SQETQEMV+M P T EQ GYFYS+LN N NV A ESSNEE LWDGLWNLDDV N + +VHNLVTPF Sbjct: 1 MYWGVMAGNMGWGAIEEDGWRKGPWTAEEDKLLIQYVRLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKTPSDAAAKVKIRSSRRQTFQQQQQQLKQKLQQQEVEQQQQLQFNLDMKGIINLLEENDHRVPSISQETQEMVSMYPITMEQQGYFYSLLNDNDNVSAPESSNEEFLWDGLWNLDDVFCN-FNVGSATSKASVHNLVTPF 263
BLAST of rna-XM_004495198.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SP86|A0A0S3SP86_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G129600 PE=4 SV=1) HSP 1 Score: 367.466 bits (942), Expect = 9.756e-126 Identity = 193/262 (73.66%), Postives = 215/262 (82.06%), Query Frame = 0 Query: 1 MYSGVIEGNTRWCVIEEDGWRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKTKKVSLRK-----QNQQQIKQQQQIQQQQQIQYNFDMKGILELLEENEYSVPSTSQETQEMVTMCPETTEQHGYFYSMLNGNCNVYADESSNEEILWDGLWNLDDVLGNSMQLMLQAKPTNVHNLVTPF 257 MY GV+ GN W +IEE GWRKGPWT+EED+LLI+YV+LHGEGRWNSVA LAGL+RNGKSCRLRWVNYLRPDLKKGQITPQEESII ELHARWGNRWSTIAR+LPGRTDNEIKNYWRTHFKKKAK +DAA+K + S R+ Q Q QQQ QQQQQ Q+N D+KGI+ LLEEN++ VPSTSQETQEMV MCP T+EQ GYFYSM N + NV A ESSNEEILWDGLWNLDDVL N +K T++HNLVTPF Sbjct: 1 MYWGVMAGNMGWGMIEEQGWRKGPWTAEEDRLLIQYVRLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDLKKGQITPQEESIIQELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKSPSDAAEKARIRSSRRQQFQQQQLQLKHQQQVQQQQQQFQFNLDIKGIINLLEENDHRVPSTSQETQEMVNMCPNTSEQQGYFYSMFNVSDNVSAPESSNEEILWDGLWNLDDVLCNFNAASATSK-TSLHNLVTPF 261
BLAST of rna-XM_004495198.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9VBI7|A0A0L9VBI7_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g108400 PE=4 SV=1) HSP 1 Score: 367.466 bits (942), Expect = 9.756e-126 Identity = 193/262 (73.66%), Postives = 216/262 (82.44%), Query Frame = 0 Query: 1 MYSGVIEGNTRWCVIEEDGWRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKTKKVSLRK-----QNQQQIKQQQQIQQQQQIQYNFDMKGILELLEENEYSVPSTSQETQEMVTMCPETTEQHGYFYSMLNGNCNVYADESSNEEILWDGLWNLDDVLGNSMQLMLQAKPTNVHNLVTPF 257 MY GV+ GN W +IEE GWRKGPWT+EED+LLI+YV+LHGEGRWNSVA LAGL+RNGKSCRLRWVNYLRPDLKKGQITPQEESII ELHARWGNRWSTIAR+LPGRTDNEIKNYWRTHFKKKAK +DAA+K + S R+ Q Q QQQ +QQQQQ Q+N D+KGI+ LLEEN++ VPSTSQETQEMV MCP T+EQ GYFYSM N + NV A ESSNEEILWDGLWNLDDVL N +K T++HNLVTPF Sbjct: 1 MYWGVMAGNMGWGMIEEQGWRKGPWTAEEDRLLIQYVRLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDLKKGQITPQEESIIQELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKSPSDAAEKARIRSSRRQQFQQQQLQLKHQQQVLQQQQQFQFNLDIKGIINLLEENDHRVPSTSQETQEMVNMCPNTSEQQGYFYSMFNVSDNVSAPESSNEEILWDGLWNLDDVLCNFNAASATSK-TSLHNLVTPF 261
BLAST of rna-XM_004495198.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V4L4|A0A1S3V4L4_VIGRR (Transcription factor MYB2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771747 PE=4 SV=1) HSP 1 Score: 363.614 bits (932), Expect = 3.658e-124 Identity = 193/267 (72.28%), Postives = 219/267 (82.02%), Query Frame = 0 Query: 1 MYSGVIEGNTRWCVIEEDGWRKGPWTSEEDKLLIEYVKLHGEGRWNSVASLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARNLPGRTDNEIKNYWRTHFKKKAKKTADAADKTKKVSLRK----------QNQQQIKQQQQIQQQQQIQYNFDMKGILELLEENEYSVPSTSQETQEMVTMCPETTEQHGYFYSMLNGNCNVYADESSNEEILWDGLWNLDDVLGNSMQLMLQAKPTNVHNLVTPF 257 MY GV+ GN W VIEE GWRKGPWT+EED+LLI+YV+LHGEGRWNSVA LAGL+RNGKSCRLRWVNYLRPDLKKGQITPQEESII ELHARWGNRWSTIAR+LPGR DNEIKNYWRTHFKKKAK +DAA+K + S R+ ++QQQ++ QQQ+QQQQQ Q+N D+KGI+ LLEEN++ VPSTSQETQEMV MCP T+EQ GYFYSM N + NV A ESSNEEILWDGLWNLDDVL N +K + +HNLVTPF Sbjct: 1 MYWGVMAGNMGWGVIEEQGWRKGPWTAEEDRLLIQYVRLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDLKKGQITPQEESIIQELHARWGNRWSTIARSLPGRXDNEIKNYWRTHFKKKAKSXSDAAEKARIRSSRRQQFQQQQLQLKHQQQVQVQQQLQQQQQFQFNLDIKGIINLLEENDHRVPSTSQETQEMVNMCPNTSEQQGYFYSMFNVSDNVSAPESSNEEILWDGLWNLDDVLCNFNAASATSKAS-LHNLVTPF 266 The following BLAST results are available for this feature:
BLAST of rna-XM_004495198.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11) Total hits: 10
BLAST of rna-XM_004495198.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot) Total hits: 10
BLAST of rna-XM_004495198.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_004495198.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004495198.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004495198.3; organism=Cicer arietinum; type=mRNA; length=777bpback to top protein sequence of rna-XM_004495198.3_CaCDCfrontier-NCBI_v1 >rna-XM_004495198.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004495198.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004495198.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=258bpback to top mRNA from alignment at chr4:2532422..2533898- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_004495198.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004495198.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004495198.3; organism=Cicer arietinum; type=mRNA; length=1477bp; location=Sequence derived from: chr4:2532422..2533898- (Cicer arietinumback to top Coding sequence (CDS) from alignment at chr4:2532422..2533898- >rna-XM_004495198.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004495198.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004495198.3; organism=Cicer arietinum; type=CDS; length=777bp; location=Sequence derived from: chr4:2532422..2533898- (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|