rna-XM_004495883.3

Transcript Overview
Namerna-XM_004495883.3
Unique Namerna-XM_004495883.3_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length486
Productuncharacterized LOC101515328
References
External references for this mRNA
DatabaseAccession
GeneID101515328
GenBankXM_004495883.3
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr4chromosomechr4:7688461..7689334 +Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascanL244Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cacanL089Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cacanL131Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascanL344Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascanL438Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ancanL0398Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0641Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0763Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0772Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cancanL095Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanL1023Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caicanL0380Cicer arietinum ICC 4958 genome v2Cicer arietinum
canccR0441Cajanus cajan Asha genome v1.0Cajanus cajan
canccR0457Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR328Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR341Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canvrvR263Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR230Vicia faba cv. Tiffany genome v1.0Vicia faba
canpvR280Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvfhR239Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canpvR330Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvrvR336Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR287Vicia faba cv. Tiffany genome v1.0Vicia faba
canvfhR303Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvssR293Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR358Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvuaR207Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canzwsR206Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuR220Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR238Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR267Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR284Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canpsR256Pisum sativum Cameor genome v1aPisum sativum
canpsR284Pisum sativum Cameor genome v1aPisum sativum
canpsR300Pisum sativum Cameor genome v1aPisum sativum
avjcanL311Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL405Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR204Cicer arietinum
cancarR212Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
LR48_mrnaVigan10g028600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Va03G080970.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Hedin2.R1.3g101000.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Cr_08226.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-XM_014656790.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-KK1_027215Cajanus cajan Asha genome v1.0Cajanus cajan
Psat6g164560.1Pisum sativum Cameor genome v1aPisum sativum
Psat3g021640.1Pisum sativum Cameor genome v1aPisum sativum
Phvul.001G208000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Hedin2.R1.5g163360.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.3g081360.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat06G0448700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun01g192500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_014640070.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr01.1833Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-TanjilR_15422Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
LR48_mrnaVigan03g283700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
evm.model.Chr07.2753Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun07g121000.7Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
jg2734.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.5g130280.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Va02G037710.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-KK1_006910Cajanus cajan Asha genome v1.0Cajanus cajan
rna-TanjilR_16932Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.007G246900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg31440.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Ca_03473Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Ca_09852.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_00970Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_012714113.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101515328gene-LOC101515328_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_004495883.3-1exon-XM_004495883.3-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_004495940.1cds-XP_004495940.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_004495883.3_CaCDCfrontier-NCBI_v1rna-XM_004495883.3_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_004495883.3_CaCDCfrontier-NCBI_v1rna-XM_004495883.3_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


Homology
BLAST of rna-XM_004495883.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:1042458-1042961 FORWARD LENGTH=167)

HSP 1 Score: 169.088 bits (427), Expect = 3.530e-54
Identity = 80/156 (51.28%), Postives = 111/156 (71.15%), Query Frame = 0
Query:    1 MHSIKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFT-IESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLN 155
            M  + IL    +FL +L ++  +  E++  + Y +L  Y FP G+LPK  + Y L+  TG+F  YF+ +CSF  + SY LNYKSTI+G IS+N+L KL GV VK+L LWLNIVEV R+GD+++FSVGITSA+F ++ FLESPQCGCGF+C   +L+
Sbjct:    1 MSRLPILIASCLFLSSLTAAVVTAAESDTPTAYSLLQSYNFPVGILPKGVVAYDLDTTTGKFHAYFNDSCSFNLVGSYQLNYKSTISGYISENKLKKLTGVKVKVLFLWLNIVEVIRNGDEMEFSVGITSANFAIQEFLESPQCGCGFECKDSKLD 156          
BLAST of rna-XM_004495883.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:621637-622137 FORWARD LENGTH=166)

HSP 1 Score: 163.31 bits (412), Expect = 7.293e-52
Identity = 83/161 (51.55%), Postives = 113/161 (70.19%), Query Frame = 0
Query:    7 LSIFVVFLLTLRSSSCSLIEANKL-SPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIE-SYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDC----NSLRLNGDVSSI 161
            +SIF  FL  + S   +    + + + Y +L  Y FP G+LPK  + Y L+K TG+F  YF+K+CSF ++ SY L+YKSTI+G IS+N++ KL GV VK+L LWLNIVEV R+GD+++FSVGITSA+F ++ F ESPQCGCGFDC     +L  N  VSS+
Sbjct:    6 ISIFFFFLFCIPSPLIAAANDDDIPTAYTLLQSYNFPVGILPKGVVSYDLDKSTGQFHAYFNKSCSFALQGSYQLDYKSTISGYISENKITKLTGVKVKVLFLWLNIVEVIRNGDELEFSVGITSANFEIDEFYESPQCGCGFDCKTKTKTLGRNPFVSSV 166          
BLAST of rna-XM_004495883.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:1041179-1041643 FORWARD LENGTH=154)

HSP 1 Score: 157.532 bits (397), Expect = 9.392e-50
Identity = 75/148 (50.68%), Postives = 96/148 (64.86%), Query Frame = 0
Query:   15 LTLRSSSCSLI-----------EANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNS 151
            ++L +++CS++              K + YD +  Y  P G+LPK  + Y LN +TG F VYF+  C FTI+SY L YKSTI+GVIS   +  LKGV+VK+L  W+NI EVS  G D+DFSVGI SA F   NF ESPQCGCGFDCN+
Sbjct:    1 MSLDANTCSIVFFLFFTVSFAVSGQKPTAYDAVKLYNLPPGILPKGVVDYELNPKTGNFKVYFNDTCEFTIQSYQLKYKSTISGVISPGHVKNLKGVSVKVLFFWVNIAEVSLDGADLDFSVGIASASFPAANFEESPQCGCGFDCNN 148          
BLAST of rna-XM_004495883.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:620773-621222 FORWARD LENGTH=149)

HSP 1 Score: 148.288 bits (373), Expect = 3.681e-46
Identity = 69/143 (48.25%), Postives = 99/143 (69.23%), Query Frame = 0
Query:    7 LSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDC 149
            +SIF++FLL L S+S S+    K S Y VL  Y  P+G+LP+    Y LN+ TG F V F+  C F+I+SY + YK  I+G+I++ R+ +L GV+VK+L  W+NI EVSR GDD++F VG  S +F  + F++SP+CGCGF+C
Sbjct:    1 MSIFIIFLLLL-STSVSVSGQKKRSVYQVLENYTLPRGILPEGVHDYDLNRRTGVFKVRFNTTCQFSIDSYKVKYKPVISGIITRGRVIRLIGVSVKVLFFWINISEVSRDGDDVEFFVGAASEEFSSKYFVDSPKCGCGFNC 142          
BLAST of rna-XM_004495883.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:6611614-6612069 REVERSE LENGTH=151)

HSP 1 Score: 72.0182 bits (175), Expect = 2.008e-16
Identity = 37/110 (33.64%), Postives = 63/110 (57.27%), Query Frame = 0
Query:   36 LMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTI--ESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQC 143
            L  +GFP GLLP     Y LN+ +G+F+++ + AC  T+  ++Y   Y + +TG ISQ ++ +L+G+ V+      +I  +   GD++ F V   +A +  +NF ES  C
Sbjct:   35 LTNHGFPIGLLPLSVKDYFLNQTSGDFSLFLNGACKITLPPDNYIATYSNKVTGRISQGKIAELQGIRVRAFFKSWSITGIRSSGDNLVFEVAGITAKYPSKNFDESLDC 144          
BLAST of rna-XM_004495883.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:6611614-6612069 REVERSE LENGTH=151)

HSP 1 Score: 72.0182 bits (175), Expect = 2.008e-16
Identity = 37/110 (33.64%), Postives = 63/110 (57.27%), Query Frame = 0
Query:   36 LMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTI--ESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQC 143
            L  +GFP GLLP     Y LN+ +G+F+++ + AC  T+  ++Y   Y + +TG ISQ ++ +L+G+ V+      +I  +   GD++ F V   +A +  +NF ES  C
Sbjct:   35 LTNHGFPIGLLPLSVKDYFLNQTSGDFSLFLNGACKITLPPDNYIATYSNKVTGRISQGKIAELQGIRVRAFFKSWSITGIRSSGDNLVFEVAGITAKYPSKNFDESLDC 144          
BLAST of rna-XM_004495883.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:2384837-2385617 REVERSE LENGTH=177)

HSP 1 Score: 69.707 bits (169), Expect = 2.737e-15
Identity = 46/154 (29.87%), Postives = 81/154 (52.60%), Query Frame = 0
Query:    4 IKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNI----VEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLR 153
            ++I+ I ++  +     S S + A   S  ++L+  G P GL PK   G+++N ETG F+VY +++C    E+  L+Y   ++G I   ++  L G++ + L LWL +    V+V   G  I F VG+    + +  F E+P+     DC ++R
Sbjct:    2 LRIVQITLLCFVLAAGISISAVIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYET-ELHYDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSG-LIFFDVGVLRKQYSLSLF-ETPR-----DCVAVR 147          
BLAST of rna-XM_004495883.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:2384544-2385617 REVERSE LENGTH=271)

HSP 1 Score: 69.707 bits (169), Expect = 1.338e-14
Identity = 49/162 (30.25%), Postives = 84/162 (51.85%), Query Frame = 0
Query:    4 IKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNI----VEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLNGDVSSI 161
            ++I+ I ++  +     S S + A   S  ++L+  G P GL PK   G+++N ETG F+VY +++C    E+  L+Y   ++G I   ++  L G++ + L LWL +    V+V   G  I F VG+    + +  F E+P+     DC ++R  GD   I
Sbjct:    2 LRIVQITLLCFVLAAGISISAVIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYET-ELHYDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSG-LIFFDVGVLRKQYSLSLF-ETPR-----DCVAVR--GDAEFI 153          
BLAST of rna-XM_004495883.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:2387861-2388343 REVERSE LENGTH=160)

HSP 1 Score: 67.0106 bits (162), Expect = 2.672e-14
Identity = 44/154 (28.57%), Postives = 79/154 (51.30%), Query Frame = 0
Query:    4 IKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNI----VEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLR 153
            ++I+ I  + L+ +   S S   +   + Y++L+  G P G+ PK    ++ + ETG F+VY ++AC    E+  ++Y + ITG I   ++  L G++ + L LW  +    V+V   G  I F VG+    + +  F E+P+     DC  +R
Sbjct:    3 LRIVQIAFLCLVLVAGISISTAISETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQACEAKYET-EIHYDANITGTIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSG-LIYFDVGVVRKQYSLSLF-ETPR-----DCVPVR 148          
BLAST of rna-XM_004495883.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:2387568-2388343 REVERSE LENGTH=157)

HSP 1 Score: 66.6254 bits (161), Expect = 2.884e-14
Identity = 44/154 (28.57%), Postives = 79/154 (51.30%), Query Frame = 0
Query:    4 IKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNI----VEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLR 153
            ++I+ I  + L+ +   S S   +   + Y++L+  G P G+ PK    ++ + ETG F+VY ++AC    E+  ++Y + ITG I   ++  L G++ + L LW  +    V+V   G  I F VG+    + +  F E+P+     DC  +R
Sbjct:    3 LRIVQIAFLCLVLVAGISISTAISETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQACEAKYET-EIHYDANITGTIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSG-LIYFDVGVVRKQYSLSLF-ETPR-----DCVPVR 148          
BLAST of rna-XM_004495883.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M015|Y5161_ARATH (Uncharacterized protein At5g01610 OS=Arabidopsis thaliana OX=3702 GN=At5g01610 PE=1 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 2.771e-8
Identity = 26/98 (26.53%), Postives = 51/98 (52.04%), Query Frame = 0
Query:   34 DVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTI-ESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSA 130
            ++L EY  P G+ P DA  Y  ++ET +  V     C     +S  L + +T+TG + + +L  ++G+  K++I W+ +  +S     + F+ G+  +
Sbjct:   56 ELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKGKLTDVEGIKTKVMI-WVKVTSISTDASKVYFTAGMKKS 152          
BLAST of rna-XM_004495883.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XX75|A0A1S2XX75_CICAR (Uncharacterized protein LOC101515328 OS=Cicer arietinum OX=3827 GN=LOC101515328 PE=4 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 3.258e-113
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query:    1 MHSIKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLNGDVSSI 161
            MHSIKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLNGDVSSI
Sbjct:    1 MHSIKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLNGDVSSI 161          
BLAST of rna-XM_004495883.3 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MYQ9|A0A4D6MYQ9_VIGUN (DUF538 domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g1620 PE=4 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 7.481e-82
Identity = 125/159 (78.62%), Postives = 134/159 (84.28%), Query Frame = 0
Query:    3 SIKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLNGDVSSI 161
            SIK L I VV L    ++SC+L +  +LS YDVLMEYGFP GLLPK AIGYSLN+ETG+FAVYFD ACSF IESYTLNYKSTITGVIS  RLY LKGVTVKIL+LWLNIVEV R G+DI FSVGI SADFGVENFLESPQCGCGFDCN L LNGDVSSI
Sbjct:    5 SIKFLCIVVVCL----TASCALSQPQRLSVYDVLMEYGFPVGLLPKGAIGYSLNRETGQFAVYFDGACSFVIESYTLNYKSTITGVISNGRLYNLKGVTVKILLLWLNIVEVRRQGEDIFFSVGIASADFGVENFLESPQCGCGFDCNKLPLNGDVSSI 159          
BLAST of rna-XM_004495883.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9VI63|A0A0L9VI63_PHAAN (DUF538 domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g028600 PE=4 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 2.727e-81
Identity = 124/159 (77.99%), Postives = 134/159 (84.28%), Query Frame = 0
Query:    3 SIKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLNGDVSSI 161
            SIK L I VV L    ++SC+L +  +LS YDVLMEYGFP GLLPK AIGYSLN+ETG+FAVYF+ ACSF IESYTLNYKSTITGVIS  RLY LKGVTVKIL+LWLNIVEV R G+DI FSVGI SADFGVENFLESPQCGCGFDCN L LNGDVSSI
Sbjct:    5 SIKFLCIVVVCL----TASCALSQPQRLSVYDVLMEYGFPVGLLPKGAIGYSLNRETGQFAVYFEGACSFVIESYTLNYKSTITGVISNGRLYNLKGVTVKILLLWLNIVEVRRQGEDIFFSVGIASADFGVENFLESPQCGCGFDCNKLPLNGDVSSI 159          
BLAST of rna-XM_004495883.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SSE7|A0A0S3SSE7_PHAAN (DUF538 domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G252100 PE=4 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 4.218e-81
Identity = 124/159 (77.99%), Postives = 134/159 (84.28%), Query Frame = 0
Query:    3 SIKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLNGDVSSI 161
            SIK L I VV L    ++SC+L +  +LS YDVLMEYGFP GLLPK AIGYSLN+ETG+FAVYF+ ACSF IESYTLNYKSTITGVIS  RLY LKGVTVKIL+LWLNIVEV R G+DI FSVGI SADFGVENFLESPQCGCGFDCN L LNGDVSSI
Sbjct:   16 SIKFLCIVVVCL----TASCALSQPQRLSVYDVLMEYGFPVGLLPKGAIGYSLNRETGQFAVYFEGACSFVIESYTLNYKSTITGVISNGRLYNLKGVTVKILLLWLNIVEVRRQGEDIFFSVGIASADFGVENFLESPQCGCGFDCNKLPLNGDVSSI 170          
BLAST of rna-XM_004495883.3 vs. UniProtKB/TrEMBL
Match: tr|A0A151U4M9|A0A151U4M9_CAJCA (Uncharacterized protein At5g01610 family OS=Cajanus cajan OX=3821 GN=KK1_006910 PE=4 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 1.542e-80
Identity = 119/161 (73.91%), Postives = 139/161 (86.34%), Query Frame = 0
Query:    1 MHSIKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLNGDVSSI 161
            M SIKI+ I +V   +L ++SC+L ++ KLS YDVL EYGFP GLLPK AIGYS+N+E+GEFAVYFD +C+F IESY+LNYKSTITGVI+  RLYKLKGVTVK+L+LWLNIVEV+R GDDI FSVGI SADFGV+NFLESPQCGCGFDCN+L LNG VSSI
Sbjct:    2 MSSIKIVWILMV---SLAAASCALSQSKKLSAYDVLTEYGFPVGLLPKGAIGYSINRESGEFAVYFDGSCTFDIESYSLNYKSTITGVITNGRLYKLKGVTVKVLLLWLNIVEVTRQGDDIYFSVGIASADFGVDNFLESPQCGCGFDCNNLPLNGHVSSI 159          
BLAST of rna-XM_004495883.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V1R5|A0A1S3V1R5_VIGRR (Uncharacterized protein At5g01610 OS=Vigna radiata var. radiata OX=3916 GN=LOC106770916 PE=4 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 9.585e-80
Identity = 121/159 (76.10%), Postives = 134/159 (84.28%), Query Frame = 0
Query:    3 SIKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLNGDVSSI 161
            S+K L I V+ L    ++SC+L +  +LS YDVLMEYGFP GLLPK AIGYSLN+ETG+FAVYF+ ACSF IESYTLNYKSTITG+IS  RLY LKGVTVKIL+LWLNIVEV R G+DI FSVGI SADFGVENFLESPQCGCGFDCN L LNGDVSSI
Sbjct:   16 SMKFLCIVVLCL----TASCALSQPQRLSVYDVLMEYGFPVGLLPKGAIGYSLNRETGQFAVYFNGACSFVIESYTLNYKSTITGLISNGRLYNLKGVTVKILLLWLNIVEVRRQGEDIFFSVGIASADFGVENFLESPQCGCGFDCNKLPLNGDVSSI 170          
BLAST of rna-XM_004495883.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445IGH1|A0A445IGH1_GLYSO (DUF538 domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_025730 PE=4 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 5.494e-79
Identity = 120/159 (75.47%), Postives = 133/159 (83.65%), Query Frame = 0
Query:    1 MHSIKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLNGDVS 159
            M SI+ L I +V L    ++SC+L +  KLS YDVLMEYGFP GLLPK AIGYSLN+++GEFAVYF  ACSF IESYTL YKSTITGVIS+ RLY LKGVTVKIL+LWLNIVEVSR G+DI FSVGI SADFGVENFLESPQCGCGFDC +L LNGDVS
Sbjct:    1 MSSIRFLWILMVSL----TASCALSQPQKLSAYDVLMEYGFPVGLLPKGAIGYSLNRDSGEFAVYFQGACSFDIESYTLKYKSTITGVISKGRLYNLKGVTVKILLLWLNIVEVSRQGNDIYFSVGIASADFGVENFLESPQCGCGFDCKTLPLNGDVS 155          
BLAST of rna-XM_004495883.3 vs. UniProtKB/TrEMBL
Match: tr|C6T0U9|C6T0U9_SOYBN (DUF538 domain-containing protein OS=Glycine max OX=3847 GN=100500182 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 5.494e-79
Identity = 120/159 (75.47%), Postives = 133/159 (83.65%), Query Frame = 0
Query:    1 MHSIKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLNGDVS 159
            M SI+ L I +V L    ++SC+L +  KLS YDVLMEYGFP GLLPK AIGYSLN+++GEFAVYF  ACSF IESYTL YKSTITGVIS+ RLY LKGVTVKIL+LWLNIVEVSR G+DI FSVGI SADFGVENFLESPQCGCGFDC +L LNGDVS
Sbjct:    1 MSSIRFLWILMVSL----TASCALSQPQKLSAYDVLMEYGFPVGLLPKGAIGYSLNRDSGEFAVYFQGACSFDIESYTLKYKSTITGVISKGRLYNLKGVTVKILLLWLNIVEVSRQGNDIYFSVGIASADFGVENFLESPQCGCGFDCKTLPLNGDVS 155          
BLAST of rna-XM_004495883.3 vs. UniProtKB/TrEMBL
Match: tr|I1JBK4|I1JBK4_SOYBN (DUF538 domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_02G016900 PE=4 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.286e-78
Identity = 119/158 (75.32%), Postives = 132/158 (83.54%), Query Frame = 0
Query:    1 MHSIKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLNGDV 158
            M SI+ L I VV L    ++SC+L +  KLS YDVLMEYGFP GLLPK AIGYSLN+++GEFAVYF+ ACSF IESY L YKSTITGVIS+ RLY LKGVTVKIL+LWLNIVEVSR G+DI FSVGI SADFGVENFLESPQCGCGFDC +L LNGDV
Sbjct:    2 MSSIRFLWILVVCL----TASCALSQPQKLSAYDVLMEYGFPVGLLPKGAIGYSLNRDSGEFAVYFEGACSFDIESYALKYKSTITGVISKGRLYNLKGVTVKILLLWLNIVEVSRQGNDIYFSVGIASADFGVENFLESPQCGCGFDCKTLPLNGDV 155          
BLAST of rna-XM_004495883.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2PHJ2|A0A0B2PHJ2_GLYSO (DUF538 domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_002696 PE=4 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.286e-78
Identity = 119/158 (75.32%), Postives = 132/158 (83.54%), Query Frame = 0
Query:    1 MHSIKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDAIGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGVTVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCNSLRLNGDV 158
            M SI+ L I VV L    ++SC+L +  KLS YDVLMEYGFP GLLPK AIGYSLN+++GEFAVYF+ ACSF IESY L YKSTITGVIS+ RLY LKGVTVKIL+LWLNIVEVSR G+DI FSVGI SADFGVENFLESPQCGCGFDC +L LNGDV
Sbjct:    2 MSSIRFLWILVVCL----TASCALSQPQKLSAYDVLMEYGFPVGLLPKGAIGYSLNRDSGEFAVYFEGACSFDIESYALKYKSTITGVISKGRLYNLKGVTVKILLLWLNIVEVSRQGNDIYFSVGIASADFGVENFLESPQCGCGFDCKTLPLNGDV 155          
The following BLAST results are available for this feature:
BLAST of rna-XM_004495883.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|3.530e-5451.28Symbols: no symbol available | no full name availa... [more]
|7.293e-5251.55Symbols: no symbol available | no full name availa... [more]
|9.392e-5050.68Symbols: no symbol available | no full name availa... [more]
|3.681e-4648.25Symbols: no symbol available | no full name availa... [more]
|2.008e-1633.64Symbols: no symbol available | no full name availa... [more]
|2.008e-1633.64Symbols: no symbol available | no full name availa... [more]
|2.737e-1529.87Symbols: no symbol available | no full name availa... [more]
|1.338e-1430.25Symbols: no symbol available | no full name availa... [more]
|2.672e-1428.57Symbols: no symbol available | no full name availa... [more]
|2.884e-1428.57Symbols: no symbol available | no full name availa... [more]
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BLAST of rna-XM_004495883.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
sp|Q9M015|Y5161_ARATH2.771e-826.53Uncharacterized protein At5g01610 OS=Arabidopsis t... [more]
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BLAST of rna-XM_004495883.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2XX75|A0A1S2XX75_CICAR3.258e-113100.00Uncharacterized protein LOC101515328 OS=Cicer arie... [more]
tr|A0A4D6MYQ9|A0A4D6MYQ9_VIGUN7.481e-8278.62DUF538 domain-containing protein OS=Vigna unguicul... [more]
tr|A0A0L9VI63|A0A0L9VI63_PHAAN2.727e-8177.99DUF538 domain-containing protein OS=Phaseolus angu... [more]
tr|A0A0S3SSE7|A0A0S3SSE7_PHAAN4.218e-8177.99DUF538 domain-containing protein OS=Vigna angulari... [more]
tr|A0A151U4M9|A0A151U4M9_CAJCA1.542e-8073.91Uncharacterized protein At5g01610 family OS=Cajanu... [more]
tr|A0A1S3V1R5|A0A1S3V1R5_VIGRR9.585e-8076.10Uncharacterized protein At5g01610 OS=Vigna radiata... [more]
tr|A0A445IGH1|A0A445IGH1_GLYSO5.494e-7975.47DUF538 domain-containing protein OS=Glycine soja O... [more]
tr|C6T0U9|C6T0U9_SOYBN5.494e-7975.47DUF538 domain-containing protein OS=Glycine max OX... [more]
tr|I1JBK4|I1JBK4_SOYBN2.286e-7875.32DUF538 domain-containing protein OS=Glycine max OX... [more]
tr|A0A0B2PHJ2|A0A0B2PHJ2_GLYSO2.286e-7875.32DUF538 domain-containing protein OS=Glycine soja O... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036758At5g01610-like superfamilyGENE3D2.30.240.10coord: 20..140
e-value: 1.3E-34
score: 120.8
IPR036758At5g01610-like superfamilySUPERFAMILY141562At5g01610-likecoord: 5..149
IPR007493Protein of unknown function DUF538PFAMPF04398DUF538coord: 33..137
e-value: 1.1E-29
score: 114.5
IPR007493Protein of unknown function DUF538PANTHERPTHR31676T31J12.3 PROTEIN-RELATEDcoord: 23..144

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_004495883.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004495883.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004495883.3; organism=Cicer arietinum; type=mRNA; length=486bp
ATGCATTCAATTAAAATTTTATCGATTTTTGTGGTGTTTCTTCTAACACT
AAGATCATCATCATGTTCGTTAATCGAAGCAAACAAGTTATCACCGTACG
ATGTTTTAATGGAGTATGGTTTCCCAAAGGGTCTTCTTCCAAAAGACGCA
ATAGGTTATTCGCTGAACAAAGAAACAGGTGAGTTCGCTGTGTATTTCGA
TAAAGCTTGTAGTTTCACTATTGAAAGTTACACGCTTAATTACAAGTCAA
CAATCACTGGTGTGATTTCTCAGAATAGGCTTTATAAACTCAAGGGTGTT
ACCGTCAAGATTTTGATTTTGTGGTTAAATATTGTTGAGGTTTCTCGTCA
TGGTGATGATATTGATTTCTCTGTTGGTATTACTTCTGCTGATTTTGGTG
TTGAGAATTTCCTTGAAAGCCCTCAGTGTGGTTGTGGTTTCGATTGCAAT
TCTCTTCGCTTAAACGGTGACGTTTCTTCAATTTAG
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protein sequence of rna-XM_004495883.3_CaCDCfrontier-NCBI_v1

>rna-XM_004495883.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004495883.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004495883.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=161bp
MHSIKILSIFVVFLLTLRSSSCSLIEANKLSPYDVLMEYGFPKGLLPKDA
IGYSLNKETGEFAVYFDKACSFTIESYTLNYKSTITGVISQNRLYKLKGV
TVKILILWLNIVEVSRHGDDIDFSVGITSADFGVENFLESPQCGCGFDCN
SLRLNGDVSSI
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mRNA from alignment at chr4:7688461..7689334+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_004495883.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004495883.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004495883.3; organism=Cicer arietinum; type=mRNA; length=874bp; location=Sequence derived from: chr4:7688461..7689334+ (Cicer arietinum
TgtctctttaatttattttaaacatttttcctAAACCTACCAAAAACATA GCATAAGAATCTCCACTCTATGCTGCTATATCCACCACCGCATCTTAAAT CCACGAAACAGAAACAAGGGCAAAAATTGAATTCTGCTAAAATTCCCTTT TCATATTGATTTCACAACGATgcattcaattaaaattttatcgatTTTTG TGGTGTTTCTTCTAACACTAAGATCATCATCATGTTCGTTAATCGAAGCA AACAAGTTATCACCGTACGATGTTTTAATGGAGTATGGTTTCCCAAAGGG TCTTCTTCCAAAAGACGCAATAGGTTATTCGCTGAACAAAGAAACAGGTG AGTTCGCTGTGTATTTCGATAAAGCTTGTAGTTTCACTATTGAAAGTTAC ACGCTTAATTACAAGTCAACAATCACTGGTGTGATTTCTCAGAATAGGCT TTATAAACTCAAGGGTGTTACCGTCAAGATTTTGATTTTGTGGTTAAATA TTGTTGAGGTTTCTCGTCATGGTGATGATATTGATTTCTCTGTTGGTATT ACTTCTGCTGATTTTGGTGTTGAGAATTTCCTTGAAAGCCCTCAGTGTGG TTGTGGTTTCGATTGCAATTCTCTTCGCTTAAACGGTGACGTTTCTTCAA TTTAGGtttctttgtatttttattgtgttgtatttttattatttaatttt tgaacttTTTGTTGAAGACTGTAGATCTATCTTTTATGctcttttaaatt aattaataataataggtGAATTTTATTAGGGTGTATTTTGTTTCCCCTAA AATGAATCAGAACTTTTGGTGATTTGCAGTATCATTTGCCTCAGAATCCA AACAAGGGTGGCTATTCTATTGAA
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Coding sequence (CDS) from alignment at chr4:7688461..7689334+

>rna-XM_004495883.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004495883.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004495883.3; organism=Cicer arietinum; type=CDS; length=486bp; location=Sequence derived from: chr4:7688461..7689334+ (Cicer arietinum
ATgcattcaattaaaattttatcgatTTTTGTGGTGTTTCTTCTAACACT
AAGATCATCATCATGTTCGTTAATCGAAGCAAACAAGTTATCACCGTACG
ATGTTTTAATGGAGTATGGTTTCCCAAAGGGTCTTCTTCCAAAAGACGCA
ATAGGTTATTCGCTGAACAAAGAAACAGGTGAGTTCGCTGTGTATTTCGA
TAAAGCTTGTAGTTTCACTATTGAAAGTTACACGCTTAATTACAAGTCAA
CAATCACTGGTGTGATTTCTCAGAATAGGCTTTATAAACTCAAGGGTGTT
ACCGTCAAGATTTTGATTTTGTGGTTAAATATTGTTGAGGTTTCTCGTCA
TGGTGATGATATTGATTTCTCTGTTGGTATTACTTCTGCTGATTTTGGTG
TTGAGAATTTCCTTGAAAGCCCTCAGTGTGGTTGTGGTTTCGATTGCAAT
TCTCTTCGCTTAAACGGTGACGTTTCTTCAATTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR036758At5g01610-like
IPR007493DUF538