rna-XM_004496390.3

Transcript Overview
Namerna-XM_004496390.3
Unique Namerna-XM_004496390.3_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length525
Productuncharacterized LOC101515541
References
External references for this mRNA
DatabaseAccession
GeneID101515541
GenBankXM_004496390.3
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr4chromosomechr4:11348971..11349730 +Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascanL245Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascanL249Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cacanL131Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascanL341Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ancanL0642Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0762Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caicanL0214Cicer arietinum ICC 4958 genome v2Cicer arietinum
ancanL0963Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL1024Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caicanL0391Cicer arietinum ICC 4958 genome v2Cicer arietinum
canccR0415Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR321Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR388Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR455Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canvrvR246Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR210Vicia faba cv. Tiffany genome v1.0Vicia faba
canvfhR219Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cantifR231Vicia faba cv. Tiffany genome v1.0Vicia faba
canvrvR311Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canvfhR240Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canpvR320Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canpvR353Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvssR254Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR262Vicia sativa cv. Studenica genome v1.0Vicia sativa
canzwsR199Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR238Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR254Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR238Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuR266Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuaR266Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canzwsR283Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canpsR284Pisum sativum Cameor genome v1aPisum sativum
avjcanL018Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL023Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL310Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR192Cicer arietinum
cancarR212Cicer arietinum
cancarR278Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Psat6g191360.1Pisum sativum Cameor genome v1aPisum sativum
Va02G062740.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Hedin2.R1.3g127480.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigun07g214400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.model.Chr04.1258Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
jg41368.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.1g111480.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.3g102680.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_027641Cajanus cajan Asha genome v1.0Cajanus cajan
Cr_08075.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Cr_04547.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
evm.model.Chr07.723Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun04g128200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
LR48_mrnaVigan02g201000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-TanjilR_06156Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg45650.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_02040Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014656427.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
LR48_mrnaVigan10g139500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Psat06G0516000-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Phvul.007G082100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Tiffany.R1.1g082200.1Vicia faba cv. Tiffany genome v1.0Vicia faba

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Ca_10208.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_04369Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101515541gene-LOC101515541_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_004496390.3-1exon-XM_004496390.3-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_004496447.1cds-XP_004496447.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_004496390.3_CaCDCfrontier-NCBI_v1rna-XM_004496390.3_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_004496390.3_CaCDCfrontier-NCBI_v1rna-XM_004496390.3_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


Homology
BLAST of rna-XM_004496390.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XZN6|A0A1S2XZN6_CICAR (Uncharacterized protein LOC101515541 OS=Cicer arietinum OX=3827 GN=LOC101515541 PE=4 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 2.564e-123
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
Query:    1 MNSSTICSLFLGLILISQSANAKGHGGGLVVTICKGATDRAACENILGSNSEISHAKSFSQLSKEVLEFAYNQAVEGQNFLKGLAQANNCPALTQCAHFDYDGAVMSFKSALAELTEDPQTANYDAKVAGDGPSQCDRGLASAQIVNPEVTALNRQILLLSEFAFLATSQLSSN 174
            MNSSTICSLFLGLILISQSANAKGHGGGLVVTICKGATDRAACENILGSNSEISHAKSFSQLSKEVLEFAYNQAVEGQNFLKGLAQANNCPALTQCAHFDYDGAVMSFKSALAELTEDPQTANYDAKVAGDGPSQCDRGLASAQIVNPEVTALNRQILLLSEFAFLATSQLSSN
Sbjct:    1 MNSSTICSLFLGLILISQSANAKGHGGGLVVTICKGATDRAACENILGSNSEISHAKSFSQLSKEVLEFAYNQAVEGQNFLKGLAQANNCPALTQCAHFDYDGAVMSFKSALAELTEDPQTANYDAKVAGDGPSQCDRGLASAQIVNPEVTALNRQILLLSEFAFLATSQLSSN 174          
BLAST of rna-XM_004496390.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4WDS4|A0A9D4WDS4_PEA (Pectinesterase inhibitor domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_065162 PE=4 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 7.076e-70
Identity = 109/176 (61.93%), Postives = 131/176 (74.43%), Query Frame = 0
Query:    1 MNSSTICSLFLGLILISQ---SANAKGHG--GGLVVTICKGATDRAACENILGSNSEISHAKSFSQLSKEVLEFAYNQAVEGQNFLKGLAQANNCPALTQCAHFDYDGAVMSFKSALAELTEDPQTANYDAKVAGDGPSQCDRGLASAQIVNPEVTALNRQILLLSEFAFLATSQL 171
            MNSST CS+FLGLILISQ   +ANA+ HG  G L+  +C  +++ A C  ILGSN   +  KS+ +L+K VLE A  +A  GQ+FLKGLA     PALTQCA+FDYDGAVMSFKSA+ EL +DPQTANYDAKVAGDGP+QCDRG+A+  +VNPEVTALN  I   SE AFL T+ L
Sbjct:   30 MNSSTFCSVFLGLILISQYPFAANARSHGLKGSLITIVCGASSNVAECNKILGSNPHAAEMKSYRELAKVVLEMALEKASAGQSFLKGLAAETKSPALTQCANFDYDGAVMSFKSAIGELKKDPQTANYDAKVAGDGPAQCDRGMAAGHVVNPEVTALNSLITFFSELAFLVTNYL 205          
BLAST of rna-XM_004496390.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4WC62|A0A9D4WC62_PEA (Pectinesterase inhibitor domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_065161 PE=4 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.264e-69
Identity = 108/176 (61.36%), Postives = 130/176 (73.86%), Query Frame = 0
Query:    1 MNSSTICSLFLGLILISQ---SANAKGHG--GGLVVTICKGATDRAACENILGSNSEISHAKSFSQLSKEVLEFAYNQAVEGQNFLKGLAQANNCPALTQCAHFDYDGAVMSFKSALAELTEDPQTANYDAKVAGDGPSQCDRGLASAQIVNPEVTALNRQILLLSEFAFLATSQL 171
            MNSST CS+FLGLILISQ   +ANA+ HG  G L+  +C  +++ A C  ILGSN   +  KS+ +L+K VLE A  +A  GQ+FLKGLA     PALTQCA+FDYDG VMSFKS+L EL +DPQTANYDAKVAGDGP+QCDRG+A+  +VNPEVTALN  I   SE AFL T+ L
Sbjct:   27 MNSSTFCSVFLGLILISQYPFAANARSHGLKGSLITIVCGASSNMAECNKILGSNPHAAEVKSYRELAKVVLEMALEKASAGQSFLKGLAAETKSPALTQCANFDYDGVVMSFKSSLGELKKDPQTANYDAKVAGDGPAQCDRGMAAGHVVNPEVTALNSLITFFSELAFLVTNYL 202          
BLAST of rna-XM_004496390.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4WDJ8|A0A9D4WDJ8_PEA (Pectinesterase inhibitor domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_065160 PE=4 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 1.683e-69
Identity = 108/176 (61.36%), Postives = 131/176 (74.43%), Query Frame = 0
Query:    1 MNSSTICSLFLGLILISQ---SANAKGHG--GGLVVTICKGATDRAACENILGSNSEISHAKSFSQLSKEVLEFAYNQAVEGQNFLKGLAQANNCPALTQCAHFDYDGAVMSFKSALAELTEDPQTANYDAKVAGDGPSQCDRGLASAQIVNPEVTALNRQILLLSEFAFLATSQL 171
            M +STICS+FLGLILISQ   +ANA+  G   GL+  +C  ++D A C +ILGSN + + AKSF QL+K VLE AY++A  GQ+FLK LA     PAL QCA+FDYDG VMSFKS+L EL EDPQTANYDAKVA DG +QCDRG+A+  +VNPEVT LN QI   SE AFL T++L
Sbjct:    1 MKTSTICSVFLGLILISQYPFAANARSVGLRSGLIPVVCSASSDNAQCNSILGSNPQAAQAKSFPQLAKAVLEMAYDKAAAGQSFLKALAAETKSPALIQCANFDYDGVVMSFKSSLDELKEDPQTANYDAKVASDGTAQCDRGMAAGHVVNPEVTTLNSQITFYSELAFLVTNKL 176          
BLAST of rna-XM_004496390.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4WC63|A0A9D4WC63_PEA (Pectinesterase inhibitor domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_065161 PE=4 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.100e-68
Identity = 107/176 (60.80%), Postives = 129/176 (73.30%), Query Frame = 0
Query:    1 MNSSTICSLFLGLILISQ---SANAKGHG--GGLVVTICKGATDRAACENILGSNSEISHAKSFSQLSKEVLEFAYNQAVEGQNFLKGLAQANNCPALTQCAHFDYDGAVMSFKSALAELTEDPQTANYDAKVAGDGPSQCDRGLASAQIVNPEVTALNRQILLLSEFAFLATSQL 171
            MNSST CS+FLGLILISQ   +ANA+ HG  G L+  +C  +++ A C  ILGSN   +  KS+ +L+K VLE A  +A  GQ+FLKGLA     PALTQCA+FDYDG VMSFKS+L EL +DPQTANYDAKVA DGP+QCDRG+A+  +VNPEVTALN  I   SE AFL T+ L
Sbjct:   27 MNSSTFCSVFLGLILISQYPFAANARSHGLKGSLITIVCGASSNMAECNKILGSNPHAAEVKSYRELAKVVLEMALEKASAGQSFLKGLAAETKSPALTQCANFDYDGVVMSFKSSLGELKKDPQTANYDAKVASDGPAQCDRGMAAGHVVNPEVTALNSLIAFYSELAFLVTNYL 202          
BLAST of rna-XM_004496390.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4WE96|A0A9D4WE96_PEA (Pectinesterase inhibitor domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_065161 PE=4 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.606e-68
Identity = 109/176 (61.93%), Postives = 131/176 (74.43%), Query Frame = 0
Query:    1 MNSSTICSLFLGLILISQ---SANAKGHG--GGLVVTICKGATDRAACENILGSNSEISHAKSFSQLSKEVLEFAYNQAVEGQNFLKGLAQANNCPALTQCAHFDYDGAVMSFKSALAELTEDPQTANYDAKVAGDGPSQCDRGLASAQIVNPEVTALNRQILLLSEFAFLATSQL 171
            MNSST CS+FLGLILISQ   +ANA+ HG  G L+  +C  +++ A C  ILGSN   +  KS+ +L+K VLE A  +A  GQ+FLKGLA     PALTQCA+FDYDGAVMSFKSA+ EL +DPQTANYDAKVAGDGP+QCDRG+A+  +VNPEVTALN  I   SE AFL T+ L
Sbjct:  109 MNSSTFCSVFLGLILISQYPFAANARSHGLKGSLITIVCGASSNVAECNKILGSNPHAAEMKSYRELAKVVLEMALEKASAGQSFLKGLAAETKSPALTQCANFDYDGAVMSFKSAIGELKKDPQTANYDAKVAGDGPAQCDRGMAAGHVVNPEVTALNSLITFFSELAFLVTNYL 284          
BLAST of rna-XM_004496390.3 vs. UniProtKB/TrEMBL
Match: tr|G7IBW8|G7IBW8_MEDTR (Plant invertase/pectin methylesterase inhibitor protein OS=Medicago truncatula OX=3880 GN=11416334 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.158e-56
Identity = 104/181 (57.46%), Postives = 125/181 (69.06%), Query Frame = 0
Query:    1 MNSSTICSLFLGLILISQS---ANAK-------GHGGGLVVTICKGATDRAACENILGSNSEISHAKSFSQLSKEVLEFAYNQAVEGQNFLKGLAQANNCPALTQCAHFDYDGAVMSFKSALAELTEDPQTANYDAKVAGDGPSQCDRGLASAQIVNPEVTALNRQILLLSEFAFLATSQL 171
            MNSSTICSLFLGLILISQS   ANA+       G  G LV  +C  ++++  C  +L S+ +I+ AK++ QLSK V+E A  +AVEGQ FLKGLAQ N  P L  CA F YDG V SFKS L E+TEDPQTA+YD  V GDGP+QCDR +A A IVNP +TALN+QIL LS  A  A  +L
Sbjct:    1 MNSSTICSLFLGLILISQSPFAANARVLGLGGGGGRGPLVSLLCAASSNKVECNKVL-SSPQITQAKNYKQLSKAVIEMALKKAVEGQAFLKGLAQKN--PKLETCAGFAYDGVVGSFKSCLGEITEDPQTASYDCGVVGDGPTQCDRIMADAHIVNPAITALNKQILFLSSLASRAVDKL 178          
BLAST of rna-XM_004496390.3 vs. UniProtKB/TrEMBL
Match: tr|A0A396K099|A0A396K099_MEDTR (Putative pectinesterase inhibitor domain-containing protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr1g0201641 PE=4 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.792e-56
Identity = 104/181 (57.46%), Postives = 125/181 (69.06%), Query Frame = 0
Query:    1 MNSSTICSLFLGLILISQS---ANAK-------GHGGGLVVTICKGATDRAACENILGSNSEISHAKSFSQLSKEVLEFAYNQAVEGQNFLKGLAQANNCPALTQCAHFDYDGAVMSFKSALAELTEDPQTANYDAKVAGDGPSQCDRGLASAQIVNPEVTALNRQILLLSEFAFLATSQL 171
            MNSSTICSLFLGLILISQS   ANA+       G  G LV  +C  ++++  C  +L S+ +I+ AK++ QLSK V+E A  +AVEGQ FLKGLAQ N  P L  CA F YDG V SFKS L E+TEDPQTA+YD  V GDGP+QCDR +A A IVNP +TALN+QIL LS  A  A  +L
Sbjct:   20 MNSSTICSLFLGLILISQSPFAANARVLGLGGGGGRGPLVSLLCAASSNKVECNKVL-SSPQITQAKNYKQLSKAVIEMALKKAVEGQAFLKGLAQKN--PKLETCAGFAYDGVVGSFKSCLGEITEDPQTASYDCGVVGDGPTQCDRIMADAHIVNPAITALNKQILFLSSLASRAVDKL 197          
BLAST of rna-XM_004496390.3 vs. UniProtKB/TrEMBL
Match: tr|G7IBU9|G7IBU9_MEDTR (Plant invertase/pectin methylesterase inhibitor protein OS=Medicago truncatula OX=3880 GN=11408541 PE=4 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.839e-54
Identity = 102/179 (56.98%), Postives = 123/179 (68.72%), Query Frame = 0
Query:    1 MNSSTICSLFLGLILISQS---ANAKGHGGG-----LVVTICKGATDRAACENILGSNSEISHAKSFSQLSKEVLEFAYNQAVEGQNFLKGLAQANNCPALTQCAHFDYDGAVMSFKSALAELTEDPQTANYDAKVAGDGPSQCDRGLASAQIVNPEVTALNRQILLLSEFAFLATSQL 171
            MNSSTICS+FLGLILISQS   +NA+  G G     LV  IC  ++++  C N+L S+ +I+ AK   QLS  V+E A  ++VEGQ FLKGLAQ N  P L  CA F YDG V SFKS L E+TEDPQTA+YD KVA DGP+QCDR +A   IVNP +TALN+QI  LSE A  A  +L
Sbjct:    1 MNSSTICSMFLGLILISQSPFASNARLLGLGGGGGPLVSLICAASSNKVECSNVL-SSPQIAQAKDNKQLSIAVVEIAIKKSVEGQAFLKGLAQKN--PKLETCAGFAYDGVVGSFKSCLGEITEDPQTASYDCKVAVDGPTQCDRVMADEHIVNPAITALNKQIAFLSELASKAVDKL 176          
BLAST of rna-XM_004496390.3 vs. UniProtKB/TrEMBL
Match: tr|A0A6P4BSH3|A0A6P4BSH3_ARADU (Uncharacterized protein LOC107467748 OS=Arachis duranensis OX=130453 GN=LOC107467748 PE=4 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.530e-53
Identity = 97/177 (54.80%), Postives = 117/177 (66.10%), Query Frame = 0
Query:    1 MNSSTICSLF--LGLILI------SQSANAKGHGGGLVVTICKG-ATDRAACENILGSNSEISHAKSFSQLSKEVLEFAYNQAVEGQNFLKGLAQANNCPALTQCAHFDYDGAVMSFKSALAELTEDPQTANYDAKVAGDGPSQCDRGLASAQIVNPEVTALNRQILLLSEFAFLAT 168
            MNSST  S++  LGLILI      ++  +A      LV+ +C   AT+RA C +I+ SN ++  AK+  QLS+ +LE   ++  EGQ FLK LA+    PAL QCA FDYDG V SFKSAL E+ EDP TANYDAKVA DGP  CDRGLAS  IVNP VT LN+QI LLS  AF AT
Sbjct:    1 MNSSTKSSIWFSLGLILIIANVAQAEEKSATLDLSKLVIKVCDATATERAKCMDIMRSNPKMLSAKNIVQLSQAILELGVSKGKEGQKFLKELAKKTKSPALEQCAGFDYDGVVGSFKSALGEIKEDPMTANYDAKVASDGPDTCDRGLASENIVNPAVTELNKQIRLLSGIAFAAT 177          
The following BLAST results are available for this feature:
BLAST of rna-XM_004496390.3 vs.
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of rna-XM_004496390.3 vs.
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of rna-XM_004496390.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2XZN6|A0A1S2XZN6_CICAR2.564e-123100.00Uncharacterized protein LOC101515541 OS=Cicer arie... [more]
tr|A0A9D4WDS4|A0A9D4WDS4_PEA7.076e-7061.93Pectinesterase inhibitor domain-containing protein... [more]
tr|A0A9D4WC62|A0A9D4WC62_PEA1.264e-6961.36Pectinesterase inhibitor domain-containing protein... [more]
tr|A0A9D4WDJ8|A0A9D4WDJ8_PEA1.683e-6961.36Pectinesterase inhibitor domain-containing protein... [more]
tr|A0A9D4WC63|A0A9D4WC63_PEA2.100e-6860.80Pectinesterase inhibitor domain-containing protein... [more]
tr|A0A9D4WE96|A0A9D4WE96_PEA4.606e-6861.93Pectinesterase inhibitor domain-containing protein... [more]
tr|G7IBW8|G7IBW8_MEDTR5.158e-5657.46Plant invertase/pectin methylesterase inhibitor pr... [more]
tr|A0A396K099|A0A396K099_MEDTR8.792e-5657.46Putative pectinesterase inhibitor domain-containin... [more]
tr|G7IBU9|G7IBU9_MEDTR1.839e-5456.98Plant invertase/pectin methylesterase inhibitor pr... [more]
tr|A0A6P4BSH3|A0A6P4BSH3_ARADU1.530e-5354.80Uncharacterized protein LOC107467748 OS=Arachis du... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006501Pectinesterase inhibitor domainNCBIFAMTIGR01614PME_inhibcoord: 1..171
e-value: 9.9E-10
score: 49.5
IPR006501Pectinesterase inhibitor domainPFAMPF04043PMEIcoord: 29..151
e-value: 9.6E-5
score: 34.0
IPR035513Invertase/pectin methylesterase inhibitor domain superfamilyGENE3D1.20.140.40Invertase/pectin methylesterase inhibitor family proteincoord: 27..171
e-value: 1.7E-12
score: 49.6
IPR035513Invertase/pectin methylesterase inhibitor domain superfamilySUPERFAMILY101148Plant invertase/pectin methylesterase inhibitorcoord: 29..171
NoneNo IPR availablePANTHERPTHR31890PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEINcoord: 1..171

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_004496390.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496390.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496390.3; organism=Cicer arietinum; type=mRNA; length=525bp
ATGAATTCTTCAACAATATGTTCCTTGTTCCTTGGTTTAATCCTTATTTC
TCAATCCGCAAATGCCAAAGGTCATGGAGGAGGACTAGTTGTTACAATTT
GCAAAGGTGCGACGGACAGGGCCGCGTGCGAAAACATCCTCGGATCGAAT
TCTGAAATCTCCCATGCCAAGTCCTTTTCTCAACTCTCCAAGGAGGTCCT
AGAATTTGCCTATAACCAAGCCGTTGAAGGACAAAATTTCCTTAAAGGAT
TGGCACAGGCAAACAATTGTCCAGCACTTACACAATGTGCACATTTTGAC
TATGATGGTGCGGTTATGTCTTTTAAGAGTGCCCTTGCTGAATTGACAGA
GGATCCTCAAACTGCTAACTATGATGCCAAAGTTGCCGGTGATGGACCTT
CCCAATGTGATAGAGGATTGGCATCAGCACAAATTGTTAACCCTGAAGTT
ACTGCTCTTAACCGTCAAATCCTTTTGCTTAGTGAATTTGCATTCCTAGC
CACAAGTCAACTTTCTTCTAATTAA
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protein sequence of rna-XM_004496390.3_CaCDCfrontier-NCBI_v1

>rna-XM_004496390.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496390.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496390.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=174bp
MNSSTICSLFLGLILISQSANAKGHGGGLVVTICKGATDRAACENILGSN
SEISHAKSFSQLSKEVLEFAYNQAVEGQNFLKGLAQANNCPALTQCAHFD
YDGAVMSFKSALAELTEDPQTANYDAKVAGDGPSQCDRGLASAQIVNPEV
TALNRQILLLSEFAFLATSQLSSN
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mRNA from alignment at chr4:11348971..11349730+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_004496390.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496390.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496390.3; organism=Cicer arietinum; type=mRNA; length=760bp; location=Sequence derived from: chr4:11348971..11349730+ (Cicer arietinum
CTATGAGAAGAAAGTAGGAACACACTCTCCCTCAAACCAAGGAACCCtta caaaagaaaagaaaatgaattctTCAACAATATGTTCCTTGTTCCTTGGT TTAATCCTTATTTCTCAATCCGCAAATGCCAAAGGTCATGGAGGAGGACT AGTTGTTACAATTTGCAAAGGTGCGACGGACAGGGCCGCGTGCGAAAACA TCCTCGGATCGAATTCTGAAATCTCCCATGCCAAGTCCTTTTCTCAACTC TCCAAGGAGGTCCTAGAATTTGCCTATAACCAAGCCGTTGAAGGACAAAA TTTCCTTAAAGGATTGGCACAGGCAAACAATTGTCCAGCACTTACACAAT GTGCACATTTTGACTATGATGGTGCGGTTATGTCTTTTAAGAGTGCCCTT GCTGAATTGACAGAGGATCCTCAAACTGCTAACTATGATGCCAAAGTTGC CGGTGATGGACCTTCCCAATGTGATAGAGGATTGGCATCAGCACAAATTG TTAACCCTGAAGTTACTGCTCTTAACCGTCAAATCCTTTTGCTTAGTGAA TTTGCATTCCTAGCCACAAGTCAACTTTCTTCTAATTAAATTGCATTCTT TGTATGCATATATAACATGGTGGTTATTTTGGGCATGGCTAATTTGTTAT GTTCTTTGGGGTCTCCTTAATTTGGTGTGTTGATGTATATATATGGAGGG AgagtcaataataaaatataatagcaATTTATTGCTATTTTATGTGTTCC gcatattaaa
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Coding sequence (CDS) from alignment at chr4:11348971..11349730+

>rna-XM_004496390.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496390.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496390.3; organism=Cicer arietinum; type=CDS; length=525bp; location=Sequence derived from: chr4:11348971..11349730+ (Cicer arietinum
atgaattctTCAACAATATGTTCCTTGTTCCTTGGTTTAATCCTTATTTC
TCAATCCGCAAATGCCAAAGGTCATGGAGGAGGACTAGTTGTTACAATTT
GCAAAGGTGCGACGGACAGGGCCGCGTGCGAAAACATCCTCGGATCGAAT
TCTGAAATCTCCCATGCCAAGTCCTTTTCTCAACTCTCCAAGGAGGTCCT
AGAATTTGCCTATAACCAAGCCGTTGAAGGACAAAATTTCCTTAAAGGAT
TGGCACAGGCAAACAATTGTCCAGCACTTACACAATGTGCACATTTTGAC
TATGATGGTGCGGTTATGTCTTTTAAGAGTGCCCTTGCTGAATTGACAGA
GGATCCTCAAACTGCTAACTATGATGCCAAAGTTGCCGGTGATGGACCTT
CCCAATGTGATAGAGGATTGGCATCAGCACAAATTGTTAACCCTGAAGTT
ACTGCTCTTAACCGTCAAATCCTTTTGCTTAGTGAATTTGCATTCCTAGC
CACAAGTCAACTTTCTTCTAATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR006501Pectinesterase_inhib_dom
IPR035513Invertase/methylesterase_inhib
Vocabulary: Molecular Function
TermDefinition
GO:0004857enzyme inhibitor activity