rna-XM_004496399.2
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_004496399.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:7384854-7386199 FORWARD LENGTH=242) HSP 1 Score: 200.675 bits (509), Expect = 2.274e-64 Identity = 113/240 (47.08%), Postives = 155/240 (64.58%), Query Frame = 0 Query: 2 SLPIFFLFVITSLF-KLSHSTTILVDGSSKWNNPTVHIGDSIIFKPKQHYNLCIFKNQKAFNLCNFIEANLLTDPNNTSYTWHPSRVGVFYFTFYNDSL--KSCQDSQKLAIKVI----SSRTKGAAAAPAPSSGGDVPYSP-SFPWPFRPHQVVSPGPAPTPEASSPITVPLVPFKGGGGGNGGMPFINSNPAVPLPTGEVDSATIRPIPTSGSANRGQVMIGSFGFHIGVHIMALLLL 233 S+ F+ F SLF + S S T LVDG S W +PTVH GDS+IF+ K Y+L IF+N+ AFN+CNF +A LLT PN+TS+TW+PSR G +YF+F N++ K+CQ +QKL ++VI S ++ A AP P S G V SP S+PWP P + + P P+P + +TVP G G+PFINSNPAVPLPTG+VDS +I P+PTS ++ QVM+ + +G+ +A+ L Sbjct: 10 SMLFFYFFCFLSLFSRPSLSATFLVDGVSVWKSPTVHTGDSVIFRHKYGYDLYIFRNKDAFNVCNFTQATLLTKPNSTSFTWYPSRTGSYYFSFTNNTSLPKTCQLNQKLTVQVILAAASPPSQPPATAPVPVSEGGVISSPSSYPWPLGPREGSAFSPGPSPSEITSVTVP---------GKDGVPFINSNPAVPLPTGDVDSTSINPLPTSTNSAH-QVMMMTLTVKLGLCCVAMFLF 239
BLAST of rna-XM_004496399.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:7384854-7386045 FORWARD LENGTH=225) HSP 1 Score: 190.66 bits (483), Expect = 1.070e-60 Identity = 107/213 (50.23%), Postives = 141/213 (66.20%), Query Frame = 0 Query: 2 SLPIFFLFVITSLF-KLSHSTTILVDGSSKWNNPTVHIGDSIIFKPKQHYNLCIFKNQKAFNLCNFIEANLLTDPNNTSYTWHPSRVGVFYFTFYNDSL--KSCQDSQKLAIKVI----SSRTKGAAAAPAPSSGGDVPYSP-SFPWPFRPHQVVSPGPAPTPEASSPITVPLVPFKGGGGGNGGMPFINSNPAVPLPTGEVDSATIRPIPTS 206 S+ F+ F SLF + S S T LVDG S W +PTVH GDS+IF+ K Y+L IF+N+ AFN+CNF +A LLT PN+TS+TW+PSR G +YF+F N++ K+CQ +QKL ++VI S ++ A AP P S G V SP S+PWP P + + P P+P + +TVP G G+PFINSNPAVPLPTG+VDS +I P+PTS Sbjct: 10 SMLFFYFFCFLSLFSRPSLSATFLVDGVSVWKSPTVHTGDSVIFRHKYGYDLYIFRNKDAFNVCNFTQATLLTKPNSTSFTWYPSRTGSYYFSFTNNTSLPKTCQLNQKLTVQVILAAASPPSQPPATAPVPVSEGGVISSPSSYPWPLGPREGSAFSPGPSPSEITSVTVP---------GKDGVPFINSNPAVPLPTGDVDSTSINPLPTS 213
BLAST of rna-XM_004496399.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XZP1|A0A1S2XZP1_CICAR (Uncharacterized protein LOC101490484 OS=Cicer arietinum OX=3827 GN=LOC101490484 PE=4 SV=1) HSP 1 Score: 471.855 bits (1213), Expect = 5.093e-168 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0 Query: 1 MSLPIFFLFVITSLFKLSHSTTILVDGSSKWNNPTVHIGDSIIFKPKQHYNLCIFKNQKAFNLCNFIEANLLTDPNNTSYTWHPSRVGVFYFTFYNDSLKSCQDSQKLAIKVISSRTKGAAAAPAPSSGGDVPYSPSFPWPFRPHQVVSPGPAPTPEASSPITVPLVPFKGGGGGNGGMPFINSNPAVPLPTGEVDSATIRPIPTSGSANRGQVMIGSFGFHIGVHIMALLLL 233 MSLPIFFLFVITSLFKLSHSTTILVDGSSKWNNPTVHIGDSIIFKPKQHYNLCIFKNQKAFNLCNFIEANLLTDPNNTSYTWHPSRVGVFYFTFYNDSLKSCQDSQKLAIKVISSRTKGAAAAPAPSSGGDVPYSPSFPWPFRPHQVVSPGPAPTPEASSPITVPLVPFKGGGGGNGGMPFINSNPAVPLPTGEVDSATIRPIPTSGSANRGQVMIGSFGFHIGVHIMALLLL Sbjct: 1 MSLPIFFLFVITSLFKLSHSTTILVDGSSKWNNPTVHIGDSIIFKPKQHYNLCIFKNQKAFNLCNFIEANLLTDPNNTSYTWHPSRVGVFYFTFYNDSLKSCQDSQKLAIKVISSRTKGAAAAPAPSSGGDVPYSPSFPWPFRPHQVVSPGPAPTPEASSPITVPLVPFKGGGGGNGGMPFINSNPAVPLPTGEVDSATIRPIPTSGSANRGQVMIGSFGFHIGVHIMALLLL 233
BLAST of rna-XM_004496399.2 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NA75|A0A2K3NA75_TRIPR (Early nodulin-like protein 2-like OS=Trifolium pratense OX=57577 GN=L195_g023202 PE=4 SV=1) HSP 1 Score: 373.244 bits (957), Expect = 7.234e-129 Identity = 193/244 (79.10%), Postives = 208/244 (85.25%), Query Frame = 0 Query: 1 MSLPIFFLFVITSLF-KLSHSTTILVDGSSKWNNPTVHIGDSIIFKPKQHYNLCIFKNQKAFNLCNFIEANLLTDPNNTSYTWHPSRVGVFYFTFYNDSLKSCQDSQKLAIKVISSRTKGA----------AAAPAPSSGGDVPYSPSFPWPFRPHQVVSPGPAPTPEASSPITVPLVPFKGGGGGNGGMPFINSNPAVPLPTGEVDSATIRPIPTSGSANRGQVMIGSFGFHIGVHIMALLLL 233 MSLPIFF+F+I SLF KLSHSTT+LVDGS++W NPTV+IGDSIIFK KQHYNLCIFKNQ+AFNLCNF EANLLTDPN +SYTWHPSRVG FYFTFYNDSLKSCQDSQKLAIKV SS T + A PAPSSGGD+ SPSFPWPF PHQ SPGPAPTPEASSPITVPLVP+KG G GMPFINSNPAVPLPTGEVDSATI+PIPTSG ++GQVMIGSFGFHI VHI+ALLLL Sbjct: 1 MSLPIFFVFLIPSLFFKLSHSTTVLVDGSTEWKNPTVYIGDSIIFKHKQHYNLCIFKNQEAFNLCNFTEANLLTDPNTSSYTWHPSRVGFFYFTFYNDSLKSCQDSQKLAIKVTSSSTTASAPEASSSSPIATTPAPSSGGDIRASPSFPWPFHPHQGSSPGPAPTPEASSPITVPLVPYKGSG---DGMPFINSNPAVPLPTGEVDSATIQPIPTSG--HQGQVMIGSFGFHIAVHIIALLLL 239
BLAST of rna-XM_004496399.2 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4WEA4|A0A9D4WEA4_PEA (Uncharacterized protein OS=Pisum sativum OX=3888 GN=KIW84_065170 PE=4 SV=1) HSP 1 Score: 352.829 bits (904), Expect = 2.021e-120 Identity = 177/225 (78.67%), Postives = 190/225 (84.44%), Query Frame = 0 Query: 16 KLSHSTTILVDGSSKWNNPTVHIGDSIIFKPKQHYNLCIFKNQKAFNLCNFIEANLLTDPNNTSYTWHPSRVGVFYFTFYNDSLKSCQDSQKLAIKVISSRTKGA-------AAAPAPSSGGDVPYSPSFPWPFRPHQVVSPGPAPTPEASSPITVPLVPFKGGGGGNGGMPFINSNPAVPLPTGEVDSATIRPIPTSGSANRGQVMIGSFGFHIGVHIMALLLL 233 KLS+STT+LVDGS +W NPTV+IGDSIIFK KQHYNLCIFKNQKAFNLCNF EA LLTDPN TSYTWHPSRVG FYFTFYNDSLK+C+DSQKLAI+V S+ + A PAPSSGGD+ SPSFPWPFRPHQ SPGPAPTPEASSP+TVPLVPFKG G GMPFINSNPAVPLPTGEVDSATI PIPTSG ++GQVMIG FGFHI VHIMALLLL Sbjct: 17 KLSYSTTVLVDGSLEWKNPTVYIGDSIIFKHKQHYNLCIFKNQKAFNLCNFTEATLLTDPNTTSYTWHPSRVGFFYFTFYNDSLKACEDSQKLAIEVTSATSAAVPEASSPTATTPAPSSGGDIQSSPSFPWPFRPHQGSSPGPAPTPEASSPVTVPLVPFKGSG---DGMPFINSNPAVPLPTGEVDSATINPIPTSG--HQGQVMIGPFGFHIAVHIMALLLL 236
BLAST of rna-XM_004496399.2 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4WDK8|A0A9D4WDK8_PEA (Uncharacterized protein (Fragment) OS=Pisum sativum OX=3888 GN=KIW84_065170 PE=4 SV=1) HSP 1 Score: 351.673 bits (901), Expect = 4.882e-120 Identity = 183/248 (73.79%), Postives = 198/248 (79.84%), Query Frame = 0 Query: 5 IFFLFVITSL------------FKLSHSTTILVDGSSKWNNPTVHIGDSIIFKPKQHYNLCIFKNQKAFNLCNFIEANLLTDPNNTSYTWHPSRVGVFYFTFYNDSLKSCQDSQKLAIKVISSRTKGA-------AAAPAPSSGGDVPYSPSFPWPFRPHQVVSPGPAPTPEASSPITVPLVPFKGGGGGNGGMPFINSNPAVPLPTGEVDSATIRPIPTSGSANRGQVMIGSFGFHIGVHIMALLLL 233 I F+F+ SL FKLS+STT+LVDGS +W NPTV+IGDSIIFK KQHYNLCIFKNQKAFNLCNF EA LLTDPN TSYTWHPSRVG FYFTFYNDSLK+C+DSQKLAI+V S+ + A PAPSSGGD+ SPSFPWPFRPHQ SPGPAPTPEASSP+TVPLVPFKG G GMPFINSNPAVPLPTGEVDSATI PIPTSG ++GQVMIG FGFHI VHIMALLLL Sbjct: 20 IHFIFITMSLPIFFFFLISSLFFKLSYSTTVLVDGSLEWKNPTVYIGDSIIFKHKQHYNLCIFKNQKAFNLCNFTEATLLTDPNTTSYTWHPSRVGFFYFTFYNDSLKACEDSQKLAIEVTSATSAAVPEASSPTATTPAPSSGGDIQSSPSFPWPFRPHQGSSPGPAPTPEASSPVTVPLVPFKGSG---DGMPFINSNPAVPLPTGEVDSATINPIPTSG--HQGQVMIGPFGFHIAVHIMALLLL 262
BLAST of rna-XM_004496399.2 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6LLF8|A0A2Z6LLF8_TRISU (Phytocyanin domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_42840 PE=4 SV=1) HSP 1 Score: 345.895 bits (886), Expect = 4.754e-118 Identity = 176/230 (76.52%), Postives = 192/230 (83.48%), Query Frame = 0 Query: 16 KLSHSTTILVDGSSKWNNPTVHIGDSIIFKPKQHYNLCIFKNQKAFNLCNFIEANLLTDPNNTSYTWHPSRVGVFYFTFYNDSLKSCQDSQKLAIKVISSRTKGA------------AAAPAPSSGGDVPYSPSFPWPFRPHQVVSPGPAPTPEASSPITVPLVPFKGGGGGNGGMPFINSNPAVPLPTGEVDSATIRPIPTSGSANRGQVMIGSFGFHIGVHIMALLLL 233 KLSHSTT+LVDGS++W NPTV+IGDSIIFK KQHYNLCIFKNQ+AFN CNF EA LLTDPN +SYTW+PSRVG FYFTFYNDSLK+CQDSQKLAIKV SS T + A PAPSSGGD+ SPSFPWPF PHQ SPGPAPTPEASSPITVPLVP+KG G GMPFINSNPAVPLPTGEVDSATI+P+PTSG ++GQVMIGSFGFHI VHI+ALLLL Sbjct: 17 KLSHSTTVLVDGSTEWKNPTVYIGDSIIFKHKQHYNLCIFKNQEAFNHCNFTEATLLTDPNTSSYTWNPSRVGFFYFTFYNDSLKACQDSQKLAIKVASSSTTASAPEASSSSSSPIATTPAPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSPITVPLVPYKGNG---DGMPFINSNPAVPLPTGEVDSATIQPLPTSG--HQGQVMIGSFGFHIAVHIIALLLL 241
BLAST of rna-XM_004496399.2 vs. UniProtKB/TrEMBL
Match: tr|G7IBY5|G7IBY5_MEDTR (Cupredoxin superfamily protein, putative OS=Medicago truncatula OX=3880 GN=11422433 PE=4 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 7.130e-117 Identity = 182/242 (75.21%), Postives = 196/242 (80.99%), Query Frame = 0 Query: 1 MSLPIFFLFVITSLF-KLSHSTTILVDGSSKWNNPTVHIGDSIIFKPKQHYNLCIFKNQKAFNLCNFIEANLLTDPNNT--SYTWHPSRVGVFYFTFYNDSLKSCQDSQKLAIKVISSRTKGAAAA------PAPSSGGDVPYSPSFPWPFRPHQVVSPGPAPTPEASSPITVPLVPFKGGGGGNGGMPFINSNPAVPLPTGEVDSATIRPIPTSGSANRGQVMIGSFGFHIGVHIMALLLL 233 MSLPIFF F+I SLF KLSHSTTILVDGSS+W NPTV IGDSI FK KQ+YNL IFKNQKAFNLCNF +ANLLTDP+ T SYTWHPSRVG FYFTF NDSLK+CQDSQKLAIKV ++ A+ P PSSGGD+ SPSFPWPF PHQ SPGPAPTPEASSPITVPLVP+KG G GMPFINSNPAVPLPTGEVDSATI P+ TSG ++GQVMIG GFH VHIMALLLL Sbjct: 1 MSLPIFFYFLILSLFFKLSHSTTILVDGSSEWKNPTVSIGDSITFKHKQNYNLYIFKNQKAFNLCNFTQANLLTDPSTTSCSYTWHPSRVGFFYFTFSNDSLKACQDSQKLAIKVTPTKASAPEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSPITVPLVPYKGSG---DGMPFINSNPAVPLPTGEVDSATIHPLATSG--HQGQVMIGLVGFHAAVHIMALLLL 237
BLAST of rna-XM_004496399.2 vs. UniProtKB/TrEMBL
Match: tr|I3SBE2|I3SBE2_MEDTR (Cupredoxin OS=Medicago truncatula OX=3880 PE=2 SV=1) HSP 1 Score: 333.569 bits (854), Expect = 3.172e-113 Identity = 178/241 (73.86%), Postives = 192/241 (79.67%), Query Frame = 0 Query: 1 MSLPIFFLFVITSLF-KLSHSTTILVDGSSKWNNPTVHIGDSIIFKPKQHYNLCIFKNQKAFNLCNFIEANLLTDPNNT--SYTWHPSRVGVFYFTFYNDSLKSCQDSQKLAIKVISSRTKGAAAA------PAPSSGGDVPYSPSFPWPFRPHQVVSPGPAPTPEASSPITVPLVPFKGGGGGNGGMPFINSNPAVPLPTGEVDSATIRPIPTSGSANRGQVMIGSFGFHIGVHIMALLL 232 MSLPIFF F+I SLF KLSHSTTILVDGSS+W NPTV IGDSI FK KQ+YNL IFKNQKAFNLCNF +ANLLTDP+ T SYTWHPSRVG FYFTF NDSLK+CQDSQKLAIKV ++ A+ P PSSGGD+ SPSFPWPF PHQ SPGPAPTPEASSPITVPLVP+KG G GMPFINSNPAVPLPTGE D ATI P+ T G ++GQVMIG GFH VHIMALLL Sbjct: 1 MSLPIFFYFLILSLFFKLSHSTTILVDGSSEWKNPTVSIGDSITFKHKQNYNLYIFKNQKAFNLCNFTQANLLTDPSTTSCSYTWHPSRVGFFYFTFSNDSLKACQDSQKLAIKVTPTKASAPEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSPITVPLVPYKGSG---DGMPFINSNPAVPLPTGEADFATIHPLATFG--HQGQVMIGLVGFHAAVHIMALLL 236
BLAST of rna-XM_004496399.2 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8MIA8|A0A8B8MIA8_ABRPR (Uncharacterized protein LOC113873629 OS=Abrus precatorius OX=3816 GN=LOC113873629 PE=4 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 4.618e-107 Identity = 161/215 (74.88%), Postives = 177/215 (82.33%), Query Frame = 0 Query: 19 HSTTILVDGSSKWNNPTVHIGDSIIFKPKQHYNLCIFKNQKAFNLCNFIEANLLTDPNNTSYTWHPSRVGVFYFTFYNDSLKSCQDSQKLAIKVISSRTKGAAAAPAPSSGGDVPYSPSFPWPFRPHQVVSPGPAPTPEASSPITVPLVPFKGGGGGNGGMPFINSNPAVPLPTGEVDSATIRPIPTSGSANRGQVMIGSFGFHIGVHIMALLLL 233 H TTILVDGSS+W NP V IGD+IIFK KQHYNL IFKNQ+AF LCNF +A LLT+PN TSYTWHPSR G FYFTF+N SLK+CQ S+KLAIKV S+ + A PAPSSGG+VP SPSFPWPFRPHQ SPGPA P+ASSP+TVPLVP KG GGMPFINSNPAVPLPTGEVDSATIRP+PTSG + GQVMIGS GFHI +H MALLLL Sbjct: 20 HCTTILVDGSSEWKNPIVSIGDNIIFKHKQHYNLYIFKNQEAFKLCNFTQATLLTNPNTTSYTWHPSRPGFFYFTFHNGSLKACQGSEKLAIKVASAAEQSPMATPAPSSGGEVPSSPSFPWPFRPHQAASPGPA--PQASSPVTVPLVPDKG-----GGMPFINSNPAVPLPTGEVDSATIRPLPTSG--HEGQVMIGSIGFHIAMHTMALLLL 225
BLAST of rna-XM_004496399.2 vs. UniProtKB/TrEMBL
Match: tr|A0A072VPQ1|A0A072VPQ1_MEDTR (Cupredoxin superfamily protein, putative OS=Medicago truncatula OX=3880 GN=11422433 PE=4 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 2.258e-105 Identity = 168/225 (74.67%), Postives = 182/225 (80.89%), Query Frame = 0 Query: 1 MSLPIFFLFVITSLF-KLSHSTTILVDGSSKWNNPTVHIGDSIIFKPKQHYNLCIFKNQKAFNLCNFIEANLLTDPNNT--SYTWHPSRVGVFYFTFYNDSLKSCQDSQKLAIKVISSRTKGAAAA------PAPSSGGDVPYSPSFPWPFRPHQVVSPGPAPTPEASSPITVPLVPFKGGGGGNGGMPFINSNPAVPLPTGEVDSATIRPIPTSGSANRGQVMI 216 MSLPIFF F+I SLF KLSHSTTILVDGSS+W NPTV IGDSI FK KQ+YNL IFKNQKAFNLCNF +ANLLTDP+ T SYTWHPSRVG FYFTF NDSLK+CQDSQKLAIKV ++ A+ P PSSGGD+ SPSFPWPF PHQ SPGPAPTPEASSPITVPLVP+KG G GMPFINSNPAVPLPTGEVDSATI P+ TSG ++GQV I Sbjct: 1 MSLPIFFYFLILSLFFKLSHSTTILVDGSSEWKNPTVSIGDSITFKHKQNYNLYIFKNQKAFNLCNFTQANLLTDPSTTSCSYTWHPSRVGFFYFTFSNDSLKACQDSQKLAIKVTPTKASAPEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSPITVPLVPYKGSG---DGMPFINSNPAVPLPTGEVDSATIHPLATSG--HQGQVPI 220
BLAST of rna-XM_004496399.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6N6G7|A0A4D6N6G7_VIGUN (Cupredoxin OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g3113 PE=4 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 2.453e-98 Identity = 157/219 (71.69%), Postives = 174/219 (79.45%), Query Frame = 0 Query: 19 HSTTILVDGSSKWNNPTVHIGDSIIFKPKQHYNLCIFKNQKAFNLCNFIEANLLTDPNNTSYTWHPSRVGVFYFTFYNDSLKSCQDSQKLAIKVISSR---TKGAAAAPAPSSGGDVPYSPSFPWPFRPHQVV-SPGPAPTPEASSPITVPLVPFKGGGGGNGGMPFINSNPAVPLPTGEVDSATIRPIPTSGSANRGQVMIGSFGFHIGVHIMALLLL 233 HS TILVDGSS+W NPTV IGDSIIFK KQH+NL IFKN+KA+NLCN +A LLT+P YTWHPSR G FYFTF+N SLK+C+DS+KLAIKV SS A PAPSSGG+VP SPSFPWPFRPHQ SPGPAP +A SP+TVPLVP KG GGMPFINSNPAVPLPTGEVDSATIRP+PTSG ++GQVMIGSFG I V+ MALLLL Sbjct: 21 HSATILVDGSSEWKNPTVSIGDSIIFKHKQHFNLYIFKNEKAYNLCNITQATLLTNP----YTWHPSRPGFFYFTFHNGSLKACKDSEKLAIKVASSAMVPEPSPVATPAPSSGGEVPSSPSFPWPFRPHQTASSPGPAPQAQAGSPLTVPLVPDKG-----GGMPFINSNPAVPLPTGEVDSATIRPLPTSG--HQGQVMIGSFGVGIAVYTMALLLL 228 The following BLAST results are available for this feature:
BLAST of rna-XM_004496399.2 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11) Total hits: 2
BLAST of rna-XM_004496399.2 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot) Total hits: 0
BLAST of rna-XM_004496399.2 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_004496399.2_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496399.2_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496399.2; organism=Cicer arietinum; type=mRNA; length=702bpback to top protein sequence of rna-XM_004496399.2_CaCDCfrontier-NCBI_v1 >rna-XM_004496399.2_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496399.2_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496399.2_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=233bpback to top mRNA from alignment at chr4:11406147..11408312- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_004496399.2_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496399.2_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496399.2; organism=Cicer arietinum; type=mRNA; length=2166bp; location=Sequence derived from: chr4:11406147..11408312- (Cicer arietinumback to top Coding sequence (CDS) from alignment at chr4:11406147..11408312- >rna-XM_004496399.2_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496399.2_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496399.2; organism=Cicer arietinum; type=CDS; length=702bp; location=Sequence derived from: chr4:11406147..11408312- (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|