rna-XM_004496659.3

Transcript Overview
Namerna-XM_004496659.3
Unique Namerna-XM_004496659.3_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length591
Productuncharacterized LOC101514677
References
External references for this mRNA
DatabaseAccession
GeneID101514677
GenBankXM_004496659.3
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr4chromosomechr4:13634362..13635527 +Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cacanL094Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cacanL131Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascanL341Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascanL374Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cacanL134Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0426Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0638Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0643Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cacanL333Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0762Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0784Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0879Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cancanL098Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanL0881Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cancanL124Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanL0134Cicer arietinum ICC 4958 genome v2Cicer arietinum
cancanR155Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanL1024Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caicanL0401Cicer arietinum ICC 4958 genome v2Cicer arietinum
caicanL0445Cicer arietinum ICC 4958 genome v2Cicer arietinum
canccR0377Cajanus cajan Asha genome v1.0Cajanus cajan
canccR0417Cajanus cajan Asha genome v1.0Cajanus cajan
canccR0443Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR339Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR367Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR390Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
caicanL0962Cicer arietinum ICC 4958 genome v2Cicer arietinum
cancrR453Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canvrvR242Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR207Vicia faba cv. Tiffany genome v1.0Vicia faba
canvrvR268Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canvfhR215Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cantifR231Vicia faba cv. Tiffany genome v1.0Vicia faba
canpvR287Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canpvR298Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvfhR240Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cantifR246Vicia faba cv. Tiffany genome v1.0Vicia faba
canvrvR321Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canpvR353Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvfhR257Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canpvR368Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvssR262Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR307Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR346Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR349Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvuaR210Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuaR218Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR223Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR220Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuR232Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR238Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuR266Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuaR261Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuaR266Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR275Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR245Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canpsR284Pisum sativum Cameor genome v1aPisum sativum
avjcanL310Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL338Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL418Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL614Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR210Cicer arietinum
cancarR212Cicer arietinum
cancarR222Cicer arietinum
cancarR277Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
jg40896.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-KK1_016308Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Hedin2.R1.3g145040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.007G058000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_014664450.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg4239.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun07g239000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
jg2001.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
LR48_mrnaVigan02g224800Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vfaba.Hedin2.R1.3g064000.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Cr_09548.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Psat06G0166900-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun02g194100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_014657481.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Va02G042690.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Hedin2.R1.1g394800.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Cr_09044.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
evm.model.Chr07.2633Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.3g116000.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat04G0642500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun07g108700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Tiffany.R1.3g053120.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Tiffany.R1.1g323240.1Vicia faba cv. Tiffany genome v1.0Vicia faba
LR48_mrnaVigan02g119300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-TanjilR_01954Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.002G044700.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Phvul.007G173200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_035230Cajanus cajan Asha genome v1.0Cajanus cajan
Va06G001370.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Cr_21637.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-KK1_007715Cajanus cajan Asha genome v1.0Cajanus cajan
Va02G066510.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
evm.model.Chr07.509Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004511310.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_07816Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Ca_11865Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Ca_22212.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_09046.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_29793.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_04581Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_004495234.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101514677gene-LOC101514677_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_004496659.3-1exon-XM_004496659.3-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_004496716.1cds-XP_004496716.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_004496659.3_CaCDCfrontier-NCBI_v1rna-XM_004496659.3_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_004496659.3_CaCDCfrontier-NCBI_v1rna-XM_004496659.3_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


Homology
BLAST of rna-XM_004496659.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:7977774-7978370 REVERSE LENGTH=198)

HSP 1 Score: 172.17 bits (435), Expect = 2.330e-54
Identity = 107/206 (51.94%), Postives = 133/206 (64.56%), Query Frame = 0
Query:    1 MILCSIEKETLI-LLLILLVVQSSVALNGNSMKVHPVPRKRNITIQFGTNGGNTASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAETEGI----GEVRTHTVEIHPGVTKIVVRDG--ESLELSLDQLELDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHDLQ---NVEGGDSDRDMGGRLVLVQ 196
            MIL  ++ ++L   LL+L ++QS    N  +M+VHP+PR  N T+    +   T           GK LRRLPH+F+RVLELP RS+ADVAVEE  DCFRFVAET G+    GE+R + VEIHPG+TKIVVR     SL LSLD+LELD+WRFRLP+ST PEL +   VDG+LIVTVPK  + +      G        GRLVLVQ
Sbjct:    1 MILIPVKIQSLFSYLLLLNLIQSIDKPNPEAMRVHPIPRNINNTLIHHHHHNPTRE--------PGKNLRRLPHIFNRVLELPLRSEADVAVEERHDCFRFVAETVGLCNGDGEMRAYMVEIHPGITKIVVRTNGSSSLGLSLDELELDVWRFRLPESTRPELVTVACVDGDLIVTVPKNAEEEDDDGGGGDFGQGIGSGRLVLVQ 198          
BLAST of rna-XM_004496659.3 vs. Araport11
Match: | (Symbols: HSP1 | heat shock protein 20-like protein 1 | chr4:8510983-8511441 FORWARD LENGTH=152)

HSP 1 Score: 158.688 bits (400), Expect = 1.014e-49
Identity = 92/150 (61.33%), Postives = 105/150 (70.00%), Query Frame = 0
Query:   31 MKVHPVPRKRNITIQFGTNGGNTASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAETE--GIGEVRTHTVEIHPGVTKIVVRDG--ESLELSLDQLELDMWRFRLPDSTMPELASA-VFVDGELIVTVPKGHD 175
            MK+HP+PR          N  N    A+      GKKLRRLPH+FSRVLELP +SDADVAVEE+ DCFRFVAET+  G G VR + VEIHPGVTKI+VR     SL LSLD+LELD+WRFRLP+ST PEL +     DGELIVTVPK  D
Sbjct:    1 MKIHPLPR--------NENNNNLIHHARDPTREPGKKLRRLPHIFSRVLELPLKSDADVAVEESHDCFRFVAETDGGGGGGVRAYMVEIHPGVTKILVRTNGSSSLGLSLDELELDVWRFRLPESTRPELVTVDCDGDGELIVTVPKIED 142          
BLAST of rna-XM_004496659.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y098|A0A1S2Y098_CICAR (Uncharacterized protein LOC101514677 OS=Cicer arietinum OX=3827 GN=LOC101514677 PE=4 SV=1)

HSP 1 Score: 395.586 bits (1015), Expect = 5.935e-139
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0
Query:    1 MILCSIEKETLILLLILLVVQSSVALNGNSMKVHPVPRKRNITIQFGTNGGNTASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHDLQNVEGGDSDRDMGGRLVLVQ 196
            MILCSIEKETLILLLILLVVQSSVALNGNSMKVHPVPRKRNITIQFGTNGGNTASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHDLQNVEGGDSDRDMGGRLVLVQ
Sbjct:    1 MILCSIEKETLILLLILLVVQSSVALNGNSMKVHPVPRKRNITIQFGTNGGNTASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHDLQNVEGGDSDRDMGGRLVLVQ 196          
BLAST of rna-XM_004496659.3 vs. UniProtKB/TrEMBL
Match: tr|A0A396JUM2|A0A396JUM2_MEDTR (SHSP domain-containing protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr1g0205281 PE=4 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 1.442e-108
Identity = 167/197 (84.77%), Postives = 177/197 (89.85%), Query Frame = 0
Query:    1 MILCSIEKETLILLLILLVVQSSVALNGNSMKVHPVPRKRNITIQFGTNGGNTASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHDLQNVE-GGDSDRDMGGRLVLVQ 196
            MIL SI+ + L ++LILLVVQSSVAL    MK+HPVPRKRNITIQFGT+ GN +SEAQ LLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEA DCFRFVAETEGIGEVR HTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDST+PELASAVFVDGELIVTVPKGH++QNVE GG      GGRLVLVQ
Sbjct:    1 MILSSIQNQNLFVILILLVVQSSVALK---MKIHPVPRKRNITIQFGTDAGNPSSEAQTLLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAADCFRFVAETEGIGEVRAHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDSTLPELASAVFVDGELIVTVPKGHEVQNVEGGGGMGGGGGGRLVLVQ 194          
BLAST of rna-XM_004496659.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8MHS7|A0A8B8MHS7_ABRPR (Uncharacterized protein LOC113873337 OS=Abrus precatorius OX=3816 GN=LOC113873337 PE=3 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 3.430e-103
Identity = 162/196 (82.65%), Postives = 176/196 (89.80%), Query Frame = 0
Query:    1 MILCSIEKETLILLLILLVVQSSVALNGNSMKVHPVPRKRNITIQFGTNGGNTASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHDLQNVEGGDSDRDMGGRLVLVQ 196
            MIL SI K  LI+ L++LVVQSS A +G+ MKVHPVPRKRNITIQFG +GGN  SEAQALLG++GKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAET+GIG VR +TVEIHPGVTKIVVRDGES+ELSLDQLELDMWRFRLP+ST PELASAVFVDGELIVTVPKG + +N E GD DR MGGRLVLVQ
Sbjct:    1 MILSSIGKFALIITLLILVVQSSAAFHGDIMKVHPVPRKRNITIQFGVDGGNPMSEAQALLGVAGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAETDGIGNVRAYTVEIHPGVTKIVVRDGESVELSLDQLELDMWRFRLPESTRPELASAVFVDGELIVTVPKGDEEENREDGDGDRGMGGRLVLVQ 196          
BLAST of rna-XM_004496659.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3P4V5|A0A2K3P4V5_TRIPR (SHSP domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g006896 PE=4 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 1.283e-100
Identity = 152/167 (91.02%), Postives = 158/167 (94.61%), Query Frame = 0
Query:   31 MKVHPVPRKRNITIQFGTNGGNTASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHDLQNVE-GGDSDRDMGGRLVLVQ 196
            MK+HPVPRKRNITIQFGT+GGN +SEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAET+GIGEVRTHTVEIHPGV KIVVRDGESLELSLDQLELDMWRFRLPDST+PELASAVFVDGELIVTVPKGHDLQNVE G +     GGRLVLVQ
Sbjct:    1 MKIHPVPRKRNITIQFGTDGGNPSSEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAETDGIGEVRTHTVEIHPGVVKIVVRDGESLELSLDQLELDMWRFRLPDSTLPELASAVFVDGELIVTVPKGHDLQNVEGGDNGRGMGGGRLVLVQ 167          
BLAST of rna-XM_004496659.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6P050|A0A2Z6P050_TRISU (SHSP domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_46150 PE=4 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 2.268e-98
Identity = 140/149 (93.96%), Postives = 146/149 (97.99%), Query Frame = 0
Query:   31 MKVHPVPRKRNITIQFGTNGGNTASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHDLQNV 179
            MK+HPVPRKRNITIQFGT+GGN +SEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEE PDCFRFVAET+GIGEVRTHTVEIHPGV KIVVRDGESLELSLDQLE+DMWRFRLPDST+PELASAVFVDGELIVTVPKGHDLQNV
Sbjct:    1 MKIHPVPRKRNITIQFGTDGGNPSSEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEEPDCFRFVAETDGIGEVRTHTVEIHPGVVKIVVRDGESLELSLDQLEIDMWRFRLPDSTLPELASAVFVDGELIVTVPKGHDLQNV 149          
BLAST of rna-XM_004496659.3 vs. UniProtKB/TrEMBL
Match: tr|A0A072VPF4|A0A072VPF4_MEDTR (Heat shock 22 kDa protein OS=Medicago truncatula OX=3880 GN=25485194 PE=4 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 8.453e-98
Identity = 149/167 (89.22%), Postives = 155/167 (92.81%), Query Frame = 0
Query:   31 MKVHPVPRKRNITIQFGTNGGNTASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHDLQNVE-GGDSDRDMGGRLVLVQ 196
            MK+HPVPRKRNITIQFGT+ GN +SEAQ LLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEA DCFRFVAETEGIGEVR HTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDST+PELASAVFVDGELIVTVPKGH++QNVE GG      GGRLVLVQ
Sbjct:    1 MKIHPVPRKRNITIQFGTDAGNPSSEAQTLLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAADCFRFVAETEGIGEVRAHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDSTLPELASAVFVDGELIVTVPKGHEVQNVEGGGGMGGGGGGRLVLVQ 167          
BLAST of rna-XM_004496659.3 vs. UniProtKB/TrEMBL
Match: tr|A0A165D0X1|A0A165D0X1_PHAVU (Nodulin 22 OS=Phaseolus vulgaris OX=3885 GN=Nod22 PE=2 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 8.646e-96
Identity = 153/200 (76.50%), Postives = 168/200 (84.00%), Query Frame = 0
Query:    6 IEKETLILLLIL----LVVQSSVALNGNS---MKVHPVPRKRNITIQFGTNGGNTASEAQALLGISG-KKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHDLQNVEGGDSDRDM-GGRLVLVQ 196
            I+K +LI ++I+    LV+QSS A + +    MKVHPVPRKRNI+IQFG +GGN  SEAQALLGI+G KKLRRLPHVFS VLELPFRSDADV VEE PDCFRFVAETEGIG+VR HT+EIHPGVTKIVVRDG S+ELSLDQLELDMWRFRLP+ST PELASAVFVDGELIVTVPKGH     E GD DR M GGRLVLVQ
Sbjct:    2 IQKVSLIFIVIIAVLILVLQSSAAFHSSKNSIMKVHPVPRKRNISIQFGVDGGNPMSEAQALLGIAGSKKLRRLPHVFSCVLELPFRSDADVVVEEDPDCFRFVAETEGIGDVRAHTIEIHPGVTKIVVRDGGSVELSLDQLELDMWRFRLPESTRPELASAVFVDGELIVTVPKGH---GEEDGDGDRVMGGGRLVLVQ 198          
BLAST of rna-XM_004496659.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445F543|A0A445F543_GLYSO (SHSP domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_054139 PE=4 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 3.236e-95
Identity = 144/176 (81.82%), Postives = 159/176 (90.34%), Query Frame = 0
Query:    6 IEKETLILLLIL-LVVQSSVALNGNS--MKVHPVPRKRNITIQFGTNGGNTASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHDLQN 178
            IEK  L+++ +L LVVQSS A +G +  MKVHPVPRKRNI+IQFG +GGN  SEAQALLGI+GKKLRRLPHVFS VLELPFRSDADVAVEEAPDCFRFVAET+GIG+VR HTVEIHPGVTKIVVRDG S+ELSLDQLELDMWRFRLP+ST PELASAVFVDGELIVTVPKGH+ +N
Sbjct:    2 IEKVPLVIIAVLILVVQSSAAFHGINRIMKVHPVPRKRNISIQFGGDGGNPMSEAQALLGIAGKKLRRLPHVFSCVLELPFRSDADVAVEEAPDCFRFVAETDGIGDVRAHTVEIHPGVTKIVVRDGGSVELSLDQLELDMWRFRLPESTRPELASAVFVDGELIVTVPKGHEEEN 177          
BLAST of rna-XM_004496659.3 vs. UniProtKB/TrEMBL
Match: tr|I1NGG3|I1NGG3_SOYBN (SHSP domain-containing protein OS=Glycine max OX=3847 GN=100808440 PE=4 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 3.236e-95
Identity = 144/176 (81.82%), Postives = 159/176 (90.34%), Query Frame = 0
Query:    6 IEKETLILLLIL-LVVQSSVALNGNS--MKVHPVPRKRNITIQFGTNGGNTASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHDLQN 178
            IEK  L+++ +L LVVQSS A +G +  MKVHPVPRKRNI+IQFG +GGN  SEAQALLGI+GKKLRRLPHVFS VLELPFRSDADVAVEEAPDCFRFVAET+GIG+VR HTVEIHPGVTKIVVRDG S+ELSLDQLELDMWRFRLP+ST PELASAVFVDGELIVTVPKGH+ +N
Sbjct:    2 IEKVPLVIIAVLILVVQSSAAFHGINRIMKVHPVPRKRNISIQFGGDGGNPMSEAQALLGIAGKKLRRLPHVFSCVLELPFRSDADVAVEEAPDCFRFVAETDGIGDVRAHTVEIHPGVTKIVVRDGGSVELSLDQLELDMWRFRLPESTRPELASAVFVDGELIVTVPKGHEEEN 177          
BLAST of rna-XM_004496659.3 vs. UniProtKB/TrEMBL
Match: tr|A0A151U6V2|A0A151U6V2_CAJCA (SHSP domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_007715 PE=4 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.584e-94
Identity = 141/172 (81.98%), Postives = 157/172 (91.28%), Query Frame = 0
Query:    6 IEKE-TLILLLILLVVQSSVA-LNGNSMKVHPVPRKRNITIQFGTNGGNTASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHD 175
            IEK  ++I+ +++LVVQSS A + GN MKVHPVPRKRNI+IQFG +GGN  SEAQALLGI+GKKLRRLPHVFS VLELPFRSDADVAVEEA DCFRFVAET+GIG+VR HTVEIHPGVTKIVVR+G S+ELSLDQLELDMWRFRLP+ST PELASAVFVDGELIVTVPKGH+
Sbjct:    2 IEKAPSIIIAVLILVVQSSAASVQGNIMKVHPVPRKRNISIQFGVDGGNPMSEAQALLGIAGKKLRRLPHVFSCVLELPFRSDADVAVEEAADCFRFVAETDGIGDVRAHTVEIHPGVTKIVVREGGSVELSLDQLELDMWRFRLPESTRPELASAVFVDGELIVTVPKGHE 173          
The following BLAST results are available for this feature:
BLAST of rna-XM_004496659.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
|2.330e-5451.94Symbols: no symbol available | no full name availa... [more]
|1.014e-4961.33Symbols: HSP1 | heat shock protein 20-like protein... [more]
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BLAST of rna-XM_004496659.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of rna-XM_004496659.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2Y098|A0A1S2Y098_CICAR5.935e-139100.00Uncharacterized protein LOC101514677 OS=Cicer arie... [more]
tr|A0A396JUM2|A0A396JUM2_MEDTR1.442e-10884.77SHSP domain-containing protein OS=Medicago truncat... [more]
tr|A0A8B8MHS7|A0A8B8MHS7_ABRPR3.430e-10382.65Uncharacterized protein LOC113873337 OS=Abrus prec... [more]
tr|A0A2K3P4V5|A0A2K3P4V5_TRIPR1.283e-10091.02SHSP domain-containing protein OS=Trifolium praten... [more]
tr|A0A2Z6P050|A0A2Z6P050_TRISU2.268e-9893.96SHSP domain-containing protein OS=Trifolium subter... [more]
tr|A0A072VPF4|A0A072VPF4_MEDTR8.453e-9889.22Heat shock 22 kDa protein OS=Medicago truncatula O... [more]
tr|A0A165D0X1|A0A165D0X1_PHAVU8.646e-9676.50Nodulin 22 OS=Phaseolus vulgaris OX=3885 GN=Nod22 ... [more]
tr|A0A445F543|A0A445F543_GLYSO3.236e-9581.82SHSP domain-containing protein OS=Glycine soja OX=... [more]
tr|I1NGG3|I1NGG3_SOYBN3.236e-9581.82SHSP domain-containing protein OS=Glycine max OX=3... [more]
tr|A0A151U6V2|A0A151U6V2_CAJCA2.584e-9481.98SHSP domain-containing protein OS=Cajanus cajan OX... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR3387917.6 KDA CLASS II HEAT SHOCK PROTEIN-RELATEDcoord: 31..196
NoneNo IPR availableCDDcd06464ACD_sHsps-likecoord: 145..172
e-value: 0.00199797
score: 34.0669

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_004496659.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496659.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496659.3; organism=Cicer arietinum; type=mRNA; length=591bp
ATGATTCTTTGTTCAATCGAAAAGGAAACTTTGATTTTGCTATTAATCTT
GTTGGTGGTACAATCCTCTGTGGCGTTAAACGGAAACAGCATGAAGGTTC
ATCCTGTTCCGAGAAAGCGCAACATCACAATCCAATTCGGCACCAACGGC
GGTAACACCGCTTCGGAGGCTCAAGCTCTGTTGGGAATCTCTGGGAAGAA
GCTACGGCGTCTCCCACACGTTTTCAGCCGCGTGTTGGAGCTTCCTTTTC
GATCAGACGCGGACGTGGCGGTGGAGGAGGCTCCTGACTGTTTCCGTTTC
GTGGCGGAGACGGAGGGAATCGGCGAGGTGAGGACTCATACGGTGGAGAT
CCATCCCGGCGTGACGAAGATCGTGGTGAGAGATGGTGAATCGTTGGAAT
TATCGCTTGATCAGTTAGAGCTTGATATGTGGAGGTTCCGTTTGCCGGAT
TCGACGATGCCGGAGCTTGCTAGTGCGGTGTTTGTTGACGGGGAACTTAT
AGTCACGGTGCCGAAGGGACATGATCTGCAAAATGTTGAGGGTGGTGATA
GTGATAGAGATATGGGTGGTAGACTTGTTCTTGTACAGTGA
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protein sequence of rna-XM_004496659.3_CaCDCfrontier-NCBI_v1

>rna-XM_004496659.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496659.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496659.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=196bp
MILCSIEKETLILLLILLVVQSSVALNGNSMKVHPVPRKRNITIQFGTNG
GNTASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRF
VAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPD
STMPELASAVFVDGELIVTVPKGHDLQNVEGGDSDRDMGGRLVLVQ
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mRNA from alignment at chr4:13634362..13635527+

Legend: mRNAexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_004496659.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496659.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496659.3; organism=Cicer arietinum; type=mRNA; length=1166bp; location=Sequence derived from: chr4:13634362..13635527+ (Cicer arietinum
tcaaaaattctattttaataattgacgAAGGATACAGATTTAGTAAATCC AAAGAAGCGCAAGGGCAACAGAGTAACATCAACTTCAAAAAATCATCCTA ATTTTCATTTCCCTTCTGCACTTCCTCACCCATTTCATCAAATAATAACA CTTTCAATTCTTTTTCTTCCATATTCCTCGATACAAGGggaaaaagattt aaaaaataaaattaaaatcacatcACGTTCCATTTCAATTCGGAATTCTC ATCGTCGCGACCGCGTATCGAAAACTAGGGTTAGGGTTTTCATTTTCATC CCCAAAAAAGAAaggtattttcaaacaaaaggTGAAGAAGAAGAATCAAT TCTTTATGATTCTTTGTTCAATCGAAAAGGAAACTTTGATTTTGCTATTA ATCTTGTTGGTGGTACAATCCTCTGTGGCGTTAAACGGAAACAGCATGAA GGTTCATCCTGTTCCGAGAAAGCGCAACATCACAATCCAATTCGGCACCA ACGGCGGTAACACCGCTTCGGAGGCTCAAGCTCTGTTGGGAATCTCTGGG AAGAAGCTACGGCGTCTCCCACACGTTTTCAGCCGCGTGTTGGAGCTTCC TTTTCGATCAGACGCGGACGTGGCGGTGGAGGAGGCTCCTGACTGTTTCC GTTTCGTGGCGGAGACGGAGGGAATCGGCGAGGTGAGGACTCATACGGTG GAGATCCATCCCGGCGTGACGAAGATCGTGGTGAGAGATGGTGAATCGTT GGAATTATCGCTTGATCAGTTAGAGCTTGATATGTGGAGGTTCCGTTTGC CGGATTCGACGATGCCGGAGCTTGCTAGTGCGGTGTTTGTTGACGGGGAA CTTATAGTCACGGTGCCGAAGGGACATGATCTGCAAAATGTTGAGGGTGG TGATAGTGATAGAGATATGGGTGGTAGACTTGTTCTTGTACAGTGATTTT GATGACGATGATGATGGTGAAAATTCTTTTGTTAACACCTTAAAAAATGT GTCTTTAGTATGTGGGTTAGATTTcaggttgttgttgttggatgTGAAAT TTGATTGTTGCTTCAACAAAAATGTTCTTCAATAATGGTTTATATTTATA TGGCAATGTCATTTTTCACGGTTAGTTTTTTTGCTTGTTTCTAATTGCAA GGTGTCATTCCCTTTT
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Coding sequence (CDS) from alignment at chr4:13634362..13635527+

>rna-XM_004496659.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496659.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496659.3; organism=Cicer arietinum; type=CDS; length=591bp; location=Sequence derived from: chr4:13634362..13635527+ (Cicer arietinum
ATGATTCTTTGTTCAATCGAAAAGGAAACTTTGATTTTGCTATTAATCTT
GTTGGTGGTACAATCCTCTGTGGCGTTAAACGGAAACAGCATGAAGGTTC
ATCCTGTTCCGAGAAAGCGCAACATCACAATCCAATTCGGCACCAACGGC
GGTAACACCGCTTCGGAGGCTCAAGCTCTGTTGGGAATCTCTGGGAAGAA
GCTACGGCGTCTCCCACACGTTTTCAGCCGCGTGTTGGAGCTTCCTTTTC
GATCAGACGCGGACGTGGCGGTGGAGGAGGCTCCTGACTGTTTCCGTTTC
GTGGCGGAGACGGAGGGAATCGGCGAGGTGAGGACTCATACGGTGGAGAT
CCATCCCGGCGTGACGAAGATCGTGGTGAGAGATGGTGAATCGTTGGAAT
TATCGCTTGATCAGTTAGAGCTTGATATGTGGAGGTTCCGTTTGCCGGAT
TCGACGATGCCGGAGCTTGCTAGTGCGGTGTTTGTTGACGGGGAACTTAT
AGTCACGGTGCCGAAGGGACATGATCTGCAAAATGTTGAGGGTGGTGATA
GTGATAGAGATATGGGTGGTAGACTTGTTCTTGTACAGTGA
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