rna-XM_004496669.3

Transcript Overview
Namerna-XM_004496669.3
Unique Namerna-XM_004496669.3_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length834
Productimidazoleglycerol-phosphate dehydratase, chloroplastic
References
External references for this mRNA
DatabaseAccession
GeneID101490383
GenBankXM_004496669.3
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr4chromosomechr4:13715510..13719018 -Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cacanL094Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cacanL131Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascanL341Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascanL374Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cacanL134Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0426Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0638Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0643Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cacanL333Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0762Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0784Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0879Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cancanL098Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanL0881Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cancanL124Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cancanR155Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanL1024Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caicanL0401Cicer arietinum ICC 4958 genome v2Cicer arietinum
caicanL0445Cicer arietinum ICC 4958 genome v2Cicer arietinum
canccR0377Cajanus cajan Asha genome v1.0Cajanus cajan
canccR0417Cajanus cajan Asha genome v1.0Cajanus cajan
canccR0443Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR367Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR390Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
caicanL0962Cicer arietinum ICC 4958 genome v2Cicer arietinum
cancrR453Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canvrvR242Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR207Vicia faba cv. Tiffany genome v1.0Vicia faba
canvrvR268Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canvfhR215Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cantifR231Vicia faba cv. Tiffany genome v1.0Vicia faba
canpvR287Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canpvR298Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvfhR240Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cantifR246Vicia faba cv. Tiffany genome v1.0Vicia faba
canvrvR321Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canpvR353Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvfhR257Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canpvR368Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvssR262Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR346Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR349Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvuaR210Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuaR218Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR223Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR220Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuR232Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR238Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuR266Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuaR261Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuaR266Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR275Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR245Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canpsR284Pisum sativum Cameor genome v1aPisum sativum
avjcanL310Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL338Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL418Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL614Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR212Cicer arietinum
cancarR222Cicer arietinum
cancarR277Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Va02G066610.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat6g207600.1Pisum sativum Cameor genome v1aPisum sativum
Psat06G0562600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun07g239800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.3g145720.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.007G057200.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Cr_09030.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
LR48_mrnaVigan02g225600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vfaba.Tiffany.R1.3g116560.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_007723Cajanus cajan Asha genome v1.0Cajanus cajan
jg40882.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Ca_10473.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_04595Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101490383gene-LOC101490383_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_004496669.3_CaCDCfrontier-NCBI_v1rna-XM_004496669.3_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_004496669.3_CaCDCfrontier-NCBI_v1rna-XM_004496669.3_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_004496669.3-8exon-XM_004496669.3-8_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004496669.3-7exon-XM_004496669.3-7_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004496669.3-6exon-XM_004496669.3-6_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004496669.3-5exon-XM_004496669.3-5_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004496669.3-4exon-XM_004496669.3-4_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004496669.3-3exon-XM_004496669.3-3_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004496669.3-2exon-XM_004496669.3-2_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004496669.3-1exon-XM_004496669.3-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_004496726.1cds-XP_004496726.1_CaCDCfrontier-NCBI_v1_8Cicer arietinumCDS
cds-XP_004496726.1cds-XP_004496726.1_CaCDCfrontier-NCBI_v1_7Cicer arietinumCDS
cds-XP_004496726.1cds-XP_004496726.1_CaCDCfrontier-NCBI_v1_6Cicer arietinumCDS
cds-XP_004496726.1cds-XP_004496726.1_CaCDCfrontier-NCBI_v1_5Cicer arietinumCDS
cds-XP_004496726.1cds-XP_004496726.1_CaCDCfrontier-NCBI_v1_4Cicer arietinumCDS
cds-XP_004496726.1cds-XP_004496726.1_CaCDCfrontier-NCBI_v1_3Cicer arietinumCDS
cds-XP_004496726.1cds-XP_004496726.1_CaCDCfrontier-NCBI_v1_2Cicer arietinumCDS
cds-XP_004496726.1cds-XP_004496726.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS


Homology
[Close]
BLAST of rna-XM_004496669.3 vs. Araport11
Match: | (Symbols: HISN5A, IGPD | imidazoleglycerol-phosphate dehydratase | chr3:7951110-7952853 FORWARD LENGTH=270)

HSP 1 Score: 372.859 bits (956), Expect = 4.842e-131
Identity = 179/197 (90.86%), Postives = 191/197 (96.95%), Query Frame = 0 
Query:   81 RIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
            RIGEVKRVTKETNVSVKINLDG+GVADSSSGIPFLDHMLDQLASHGLFDVHV+ATGD+HIDDHHTNED+ALAIGTALL+ALG+RKGINRFG+F+APLDEAL+HVSLDLSGRP+L Y+L+IPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQ AG NSHHIIEATFKAFARALRQATE D RR GTIPSSKGVLSRS
Sbjct:   74 RIGEVKRVTKETNVSVKINLDGTGVADSSSGIPFLDHMLDQLASHGLFDVHVRATGDVHIDDHHTNEDIALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGENSHHIIEATFKAFARALRQATETDPRRGGTIPSSKGVLSRS 270
[Close]
BLAST of rna-XM_004496669.3 vs. Araport11
Match: | (Symbols: HISN5B | HISTIDINE BIOSYNTHESIS 5B | chr4:8528451-8530105 REVERSE LENGTH=272)

HSP 1 Score: 368.237 bits (944), Expect = 3.079e-129
Identity = 187/227 (82.38%), Postives = 203/227 (89.43%), Query Frame = 0 
Query:   56 HPRNISTAALTGGDK-----TSTFPIDSGSRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
            H  +IS A+   GD      T+  PI+S +RIGEVKR TKETNVSVKINLDG GV+DSS+GIPFLDHMLDQLASHGLFDVHV+ATGD HIDDHHTNEDVALAIGTALL+ALG+RKGINRFG+F+APLDEAL+HVSLDLSGRP+L Y+L+IPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQ AG NSHHIIEATFKAFARALRQATE D RR GTIPSSKGVLSRS
Sbjct:   47 HRPSISCASPPPGDNGFPAITTASPIES-ARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATESDPRRGGTIPSSKGVLSRS 272
[Close]
BLAST of rna-XM_004496669.3 vs. Araport11
Match: | (Symbols: HISN5B | HISTIDINE BIOSYNTHESIS 5B | chr4:8528441-8530105 REVERSE LENGTH=282)

HSP 1 Score: 353.599 bits (906), Expect = 2.886e-123
Identity = 179/225 (79.56%), Postives = 197/225 (87.56%), Query Frame = 0 
Query:   56 HPRNISTAALTGGDK-----TSTFPIDSGSRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLS 275
            H  +IS A+   GD      T+  PI+S +RIGEVKR TKETNVSVKINLDG GV+DSS+GIPFLDHMLDQLASHGLFDVHV+ATGD HIDDHHTNEDVALAIGTALL+ALG+RKGINRFG+F+APLDEAL+HVSLDLSGRP+L Y+L+IPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQ AG NSHHIIEATFKAFARALRQATE D RR GTIP   G+ +
Sbjct:   47 HRPSISCASPPPGDNGFPAITTASPIES-ARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATESDPRRGGTIPRFLGIFA 270
[Close]
BLAST of rna-XM_004496669.3 vs. Araport11
Match: | (Symbols: HISN5B | HISTIDINE BIOSYNTHESIS 5B | chr4:8528507-8530105 REVERSE LENGTH=308)

HSP 1 Score: 352.829 bits (904), Expect = 1.289e-122
Identity = 178/218 (81.65%), Postives = 194/218 (88.99%), Query Frame = 0 
Query:   56 HPRNISTAALTGGDK-----TSTFPIDSGSRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIP 268
            H  +IS A+   GD      T+  PI+S +RIGEVKR TKETNVSVKINLDG GV+DSS+GIPFLDHMLDQLASHGLFDVHV+ATGD HIDDHHTNEDVALAIGTALL+ALG+RKGINRFG+F+APLDEAL+HVSLDLSGRP+L Y+L+IPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQ AG NSHHIIEATFKAFARALRQATE D RR GTIP
Sbjct:   47 HRPSISCASPPPGDNGFPAITTASPIES-ARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATESDPRRGGTIP 263
[Close]
BLAST of rna-XM_004496669.3 vs. Araport11
Match: | (Symbols: HISN5A, IGPD | imidazoleglycerol-phosphate dehydratase | chr3:7951110-7952537 FORWARD LENGTH=264)

HSP 1 Score: 253.062 bits (645), Expect = 5.152e-84
Identity = 118/132 (89.39%), Postives = 131/132 (99.24%), Query Frame = 0 
Query:   81 RIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQL 212
            RIGEVKRVTKETNVSVKINLDG+GVADSSSGIPFLDHMLDQLASHGLFDVHV+ATGD+HIDDHHTNED+ALAIGTALL+ALG+RKGINRFG+F+APLDEAL+HVSLDLSGRP+L Y+L+IPTQRVGTYDTQ+
Sbjct:   74 RIGEVKRVTKETNVSVKINLDGTGVADSSSGIPFLDHMLDQLASHGLFDVHVRATGDVHIDDHHTNEDIALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQV 205
[Close]
BLAST of rna-XM_004496669.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q43072|HIS7_PEA (Imidazoleglycerol-phosphate dehydratase, chloroplastic OS=Pisum sativum OX=3888 GN=HIS3 PE=2 SV=1)

HSP 1 Score: 402.134 bits (1032), Expect = 1.541e-141
Identity = 204/271 (75.28%), Postives = 227/271 (83.76%), Query Frame = 0 
Query:   13 PKCLPSLCLKSRVCVFHTTPNPTS-PPLQASIYSLNPRILTPFIHP--RNISTAALT---GGDKTSTFPIDSGSRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
            P    S   K ++  FHTT  PT   P +AS +S N   LT  ++P   ++S+AA      G  +++ P    +R+GEVKRVTKETNVSVKINLDGSGVADSS+GIPFLDHMLDQLASHGLFDVHVKATGD+HIDDHHTNEDVALAIGTALLQALGDRKGINRFG+FSAPLDEAL+HVSLDLSGRPHLSY+LDIPTQRVGTYDTQ+VEHF QS+VNTSGMTLHIRQ AG NSHHIIEATFKAFARALRQATEYD RR G++PSSKGVLSRS
Sbjct:   11 PNYPSSFLFKPKITTFHTTLFPTKFAPFKASFFSPNHLTLTTPMNPPTTSLSSAAFVEHNNGSTSTSLPFHPETRVGEVKRVTKETNVSVKINLDGSGVADSSTGIPFLDHMLDQLASHGLFDVHVKATGDVHIDDHHTNEDVALAIGTALLQALGDRKGINRFGDFSAPLDEALIHVSLDLSGRPHLSYNLDIPTQRVGTYDTQVVEHFLQSIVNTSGMTLHIRQLAGRNSHHIIEATFKAFARALRQATEYDPRRRGSVPSSKGVLSRS 281
[Close]
BLAST of rna-XM_004496669.3 vs. UniProtKB/Swiss-Prot
Match: sp|P34047|HIS5A_ARATH (Imidazoleglycerol-phosphate dehydratase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HISN5A PE=1 SV=1)

HSP 1 Score: 372.859 bits (956), Expect = 4.610e-130
Identity = 179/197 (90.86%), Postives = 191/197 (96.95%), Query Frame = 0 
Query:   81 RIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
            RIGEVKRVTKETNVSVKINLDG+GVADSSSGIPFLDHMLDQLASHGLFDVHV+ATGD+HIDDHHTNED+ALAIGTALL+ALG+RKGINRFG+F+APLDEAL+HVSLDLSGRP+L Y+L+IPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQ AG NSHHIIEATFKAFARALRQATE D RR GTIPSSKGVLSRS
Sbjct:   74 RIGEVKRVTKETNVSVKINLDGTGVADSSSGIPFLDHMLDQLASHGLFDVHVRATGDVHIDDHHTNEDIALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGENSHHIIEATFKAFARALRQATETDPRRGGTIPSSKGVLSRS 270
[Close]
BLAST of rna-XM_004496669.3 vs. UniProtKB/Swiss-Prot
Match: sp|O23346|HIS5B_ARATH (Imidazoleglycerol-phosphate dehydratase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HISN5B PE=1 SV=2)

HSP 1 Score: 368.237 bits (944), Expect = 2.932e-128
Identity = 187/227 (82.38%), Postives = 203/227 (89.43%), Query Frame = 0 
Query:   56 HPRNISTAALTGGDK-----TSTFPIDSGSRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
            H  +IS A+   GD      T+  PI+S +RIGEVKR TKETNVSVKINLDG GV+DSS+GIPFLDHMLDQLASHGLFDVHV+ATGD HIDDHHTNEDVALAIGTALL+ALG+RKGINRFG+F+APLDEAL+HVSLDLSGRP+L Y+L+IPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQ AG NSHHIIEATFKAFARALRQATE D RR GTIPSSKGVLSRS
Sbjct:   47 HRPSISCASPPPGDNGFPAITTASPIES-ARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATESDPRRGGTIPSSKGVLSRS 272
[Close]
BLAST of rna-XM_004496669.3 vs. UniProtKB/Swiss-Prot
Match: sp|W5AWH5|HIS7C_WHEAT (Imidazoleglycerol-phosphate dehydratase 3, chloroplastic OS=Triticum aestivum OX=4565 PE=3 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 9.498e-128
Identity = 193/268 (72.01%), Postives = 215/268 (80.22%), Query Frame = 0 
Query:   13 PKCLPSLCLKSRVCVFHTTPNPTSPPLQASIYSLNPRILTPFIHPRN-ISTAALTGGDKTSTFPIDSG--SRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
            P   PSL   SR+     +P P +P    +  +   R   P +  R+ +  A+  GG+ +   P +S   SR+GEVKRVTKETNV VKINLDG+GVA+SS+GIPFLDHMLDQLASHGLFDV+VKATGD HIDDHH+NED+ALAIGTALLQALGDRKGINRFG+F+APLDEA V V LDLSGRPHLS  L IPT+RVGTYDTQLVEHFFQSLVNTSGMTLHIRQ AG NSHHIIEATFKAFARALRQATEYD RR GTIPSSKGVLSRS
Sbjct:    5 PVVSPSL---SRLHSAPASPFPKAPVGSGAGVAFPARPYGPSLRLRSAVMAASGVGGNGSPMAPEESAVSSRLGEVKRVTKETNVHVKINLDGTGVANSSTGIPFLDHMLDQLASHGLFDVYVKATGDTHIDDHHSNEDIALAIGTALLQALGDRKGINRFGHFTAPLDEAAVEVILDLSGRPHLSCGLSIPTERVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGNNSHHIIEATFKAFARALRQATEYDLRRRGTIPSSKGVLSRS 269
[Close]
BLAST of rna-XM_004496669.3 vs. UniProtKB/Swiss-Prot
Match: sp|P34048|HIS7A_WHEAT (Imidazoleglycerol-phosphate dehydratase 1, chloroplastic OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS4590 PE=2 SV=2)

HSP 1 Score: 362.844 bits (930), Expect = 3.329e-126
Identity = 181/220 (82.27%), Postives = 197/220 (89.55%), Query Frame = 0 
Query:   60 ISTAALTGGDKTSTFPIDS--GSRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
            + +A+  GG+ +   P +S   SR+GEVKRVTKETNV VKINLDG+GVA+SS+GIPFLDHMLDQLASHGLFDV+VKATGD HIDDHH+NED+ALAIGTALLQALGDRKGINRFG+F+APLDEA V V LDLSGRPHLS  L IPT+RVGTYDTQLVEHFFQSLVNTSGMTLHIRQ AG NSHHIIEATFKAFARALRQATEYD RR GTIPSSKGVLSRS
Sbjct:   50 VMSASGVGGNGSPMAPEESTVSSRLGEVKRVTKETNVHVKINLDGTGVANSSTGIPFLDHMLDQLASHGLFDVYVKATGDTHIDDHHSNEDIALAIGTALLQALGDRKGINRFGHFTAPLDEAAVEVILDLSGRPHLSCGLSIPTERVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGNNSHHIIEATFKAFARALRQATEYDLRRQGTIPSSKGVLSRS 269
[Close]
BLAST of rna-XM_004496669.3 vs. UniProtKB/Swiss-Prot
Match: sp|W5BGD1|HIS7B_WHEAT (Imidazoleglycerol-phosphate dehydratase 2, chloroplastic OS=Triticum aestivum OX=4565 PE=3 SV=1)

HSP 1 Score: 362.459 bits (929), Expect = 6.011e-126
Identity = 181/221 (81.90%), Postives = 196/221 (88.69%), Query Frame = 0 
Query:   59 NISTAALTGGDKTSTFPIDS--GSRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
            ++  A   GG+ +   P +S   SR+GEVKRVTKETNV VKINLDG+GVA+SS+GIPFLDHMLDQLASHGLFDV+VKATGD HIDDHH+NED+ALAIGTALLQALGDRKGINRFG+F+APLDEA V V LDLSGRPHLS  L IPT+RVGTYDTQLVEHFFQSLVNTSGMTLHIRQ AG NSHHIIEATFKAFARALRQATEYD RR GTIPSSKGVLSRS
Sbjct:   49 SVMAATGVGGNGSPMAPEESTVSSRLGEVKRVTKETNVHVKINLDGTGVANSSTGIPFLDHMLDQLASHGLFDVYVKATGDTHIDDHHSNEDIALAIGTALLQALGDRKGINRFGHFTAPLDEAAVEVILDLSGRPHLSCGLSIPTERVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGNNSHHIIEATFKAFARALRQATEYDLRRQGTIPSSKGVLSRS 269
[Close]
BLAST of rna-XM_004496669.3 vs. UniProtKB/Swiss-Prot
Match: sp|A9BDS9|HIS7_PROM4 (Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain MIT 9211) OX=93059 GN=hisB PE=3 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 2.270e-97
Identity = 137/197 (69.54%), Postives = 163/197 (82.74%), Query Frame = 0 
Query:   81 RIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
            R GEV RVTKETNV+V++ LDG G    S+G+ FLDHML QL+SHGLFD+ V A GD HIDDHHTNEDV +AIG AL ++LG+R+GINRFG+FSAPLDEALV V LD SGRPHLSY L+IP+QR+G+Y+T+LV+ FF ++VN SG+TLHIRQ  GTNSHHI+EA FKAFARALR ATE D RR   IPSSKGVL ++
Sbjct:    5 RTGEVHRVTKETNVTVRLGLDGKGKCKISTGVAFLDHMLQQLSSHGLFDLEVIAKGDTHIDDHHTNEDVGIAIGQALSESLGERQGINRFGHFSAPLDEALVQVVLDCSGRPHLSYGLNIPSQRIGSYETELVKEFFIAVVNNSGLTLHIRQLDGTNSHHIVEACFKAFARALRLATELDPRRGDAIPSSKGVLEQA 201
[Close]
BLAST of rna-XM_004496669.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q3AN36|HIS7_SYNSC (Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. (strain CC9605) OX=110662 GN=hisB PE=3 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 4.151e-97
Identity = 134/198 (67.68%), Postives = 163/198 (82.32%), Query Frame = 0 
Query:   80 SRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
            +R G + RVT ET+V V+++LDGSG   +S+G+PFLDHML Q++SHGL D+ + A GD HIDDHHTNEDV +A+G AL QALGDR+GI+RFG+F APLDEALV V+LD SGRPHLSY L IP+QR+GTYDT+LV+ FF ++VN SG+TLHIRQ  G NSHHI+EA FKAFARALR ATE D RR G IPSSKGVL ++
Sbjct:    2 ARQGTIHRVTGETDVKVRLDLDGSGQCQASTGVPFLDHMLHQISSHGLIDLEINAVGDTHIDDHHTNEDVGIAVGQALAQALGDRRGIHRFGHFVAPLDEALVQVALDCSGRPHLSYSLAIPSQRIGTYDTELVKEFFVAVVNNSGLTLHIRQLDGVNSHHIVEACFKAFARALRMATEVDPRRAGAIPSSKGVLEQA 199
[Close]
BLAST of rna-XM_004496669.3 vs. UniProtKB/Swiss-Prot
Match: sp|A5GID0|HIS7_SYNPW (Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. (strain WH7803) OX=32051 GN=hisB PE=3 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 4.196e-97
Identity = 133/197 (67.51%), Postives = 162/197 (82.23%), Query Frame = 0 
Query:   81 RIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
            R GE+ RVT ET+V V++NLDGSG   +S+G+ FLDHML Q++SHGL D+ + A GD HIDDHHTNEDV +A+G AL QALGDR+GI+RFG+F APLDEALV V+LD SGRPHLSY L IP+Q++GTYDT+LV+ FF ++VN SG+TLHIRQ  G NSHHI+EA FKAFARALRQATE D RR   +PSSKGVL ++
Sbjct:    3 RTGEIHRVTGETDVQVRLNLDGSGQCQASTGVAFLDHMLQQISSHGLIDLEISARGDTHIDDHHTNEDVGIAVGQALAQALGDRRGIHRFGHFLAPLDEALVQVALDCSGRPHLSYSLSIPSQKIGTYDTELVKEFFVAVVNNSGLTLHIRQLDGANSHHIVEACFKAFARALRQATEIDPRRADAVPSSKGVLEQA 199
[Close]
BLAST of rna-XM_004496669.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q3B0A6|HIS7_SYNS9 (Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. (strain CC9902) OX=316279 GN=hisB PE=3 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 6.279e-97
Identity = 134/197 (68.02%), Postives = 163/197 (82.74%), Query Frame = 0 
Query:   81 RIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
            R GEV R T ET+V VK++LDGSG  ++S+G+PFLDHML+Q++SHGL D+ + A GD HIDDHHTNEDV +A+G AL QALGDRKGI+RFG+F APLDEALV V+LD SGRPH+SY L IPTQ++G+YDT+LV+ FF ++ N SG+TLHIRQ  G NSHHI+EA FKAFARALR ATE D RR G IPSSKGVL ++
Sbjct:    2 RTGEVHRHTGETDVKVKLDLDGSGCCEASTGVPFLDHMLNQISSHGLIDLTITAVGDTHIDDHHTNEDVGIAVGQALSQALGDRKGIHRFGHFVAPLDEALVQVALDCSGRPHISYGLTIPTQKIGSYDTELVKEFFVAVANNSGLTLHIRQLDGVNSHHIVEACFKAFARALRMATEIDPRRAGAIPSSKGVLEQA 198
[Close]
BLAST of rna-XM_004496669.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XZ09|A0A1S2XZ09_CICAR (Imidazoleglycerol-phosphate dehydratase OS=Cicer arietinum OX=3827 GN=LOC101490383 PE=3 SV=1)

HSP 1 Score: 565.844 bits (1457), Expect = 0.000e+0
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0 
Query:    1 MELTVIPQPQLHPKCLPSLCLKSRVCVFHTTPNPTSPPLQASIYSLNPRILTPFIHPRNISTAALTGGDKTSTFPIDSGSRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
            MELTVIPQPQLHPKCLPSLCLKSRVCVFHTTPNPTSPPLQASIYSLNPRILTPFIHPRNISTAALTGGDKTSTFPIDSGSRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS
Sbjct:    1 MELTVIPQPQLHPKCLPSLCLKSRVCVFHTTPNPTSPPLQASIYSLNPRILTPFIHPRNISTAALTGGDKTSTFPIDSGSRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
[Close]
BLAST of rna-XM_004496669.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D5AAG6|A0A9D5AAG6_PEA (Imidazoleglycerol-phosphate dehydratase OS=Pisum sativum OX=3888 GN=KIW84_065626 PE=3 SV=1)

HSP 1 Score: 481.871 bits (1239), Expect = 1.472e-170
Identity = 240/277 (86.64%), Postives = 254/277 (91.70%), Query Frame = 0 
Query:    1 MELTVIPQPQLHPKCLPSLCLKSRVCVFHTTPNPTSPPLQASIYSLNPRILTPFIHPRNISTAALTGGDKTSTFPIDSGSRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
            MELT +PQPQLHPKCL    LKSRV VF TTP    PP QASI+S+N R LTP   PR+IST+AL GG+ TS  PIDSG+RIGEVKRVTKETNVSVKINLDGSG+ADSSSGIPFLDHMLDQLASHGLFDVHVKATGD+HIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHL YDLD+P+QRVGTYDTQLVEHFFQSLVNTSGMTLHIR+F+GTNSHHIIEATFKAFARALRQATEYD+RR GTIPSSKGVLSRS
Sbjct:    1 MELT-LPQPQLHPKCLQFPSLKSRVSVFQTTP---YPPFQASIFSVNQRYLTPLNTPRSISTSALLGGNNTSVSPIDSGARIGEVKRVTKETNVSVKINLDGSGIADSSSGIPFLDHMLDQLASHGLFDVHVKATGDVHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLGYDLDLPSQRVGTYDTQLVEHFFQSLVNTSGMTLHIRKFSGTNSHHIIEATFKAFARALRQATEYDTRRRGTIPSSKGVLSRS 273
[Close]
BLAST of rna-XM_004496669.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6PDB6|A0A2Z6PDB6_TRISU (Imidazoleglycerol-phosphate dehydratase OS=Trifolium subterraneum OX=3900 GN=TSUD_46230 PE=3 SV=1)

HSP 1 Score: 481.485 bits (1238), Expect = 2.482e-170
Identity = 236/270 (87.41%), Postives = 249/270 (92.22%), Query Frame = 0 
Query:    1 MELTVIPQPQLHPKCLPSLCLKSRVCVFHTTPNPTSPPLQASIYSLNPRILTPFIHPRNISTAALTGGDKTSTFPIDSGSRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSS 270
            MELT +PQ QLHPKCL    LKSRVC+F TTPN T PP QASI+SLNPR +TP   PRNISTAAL  G+ TSTFP+DSG+RIGEVKRVTKETNVSVKINLDG+G+ADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHL YDL++PT RVGTYDTQLVEHFFQSLVNTSGMTLHIRQF+GTNSHHIIEATFKAFARALRQATEYD+RR GTIP S
Sbjct:    1 MELT-LPQSQLHPKCLSLPSLKSRVCIFQTTPNSTCPPFQASIFSLNPRKITPLNPPRNISTAALVDGNNTSTFPLDSGARIGEVKRVTKETNVSVKINLDGTGIADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLGYDLELPTHRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFSGTNSHHIIEATFKAFARALRQATEYDTRRRGTIPRS 269
[Close]
BLAST of rna-XM_004496669.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3N005|A0A2K3N005_TRIPR (Imidazoleglycerol-phosphate dehydratase OS=Trifolium pratense OX=57577 GN=L195_g019591 PE=3 SV=1)

HSP 1 Score: 480.33 bits (1235), Expect = 1.728e-169
Identity = 239/277 (86.28%), Postives = 248/277 (89.53%), Query Frame = 0 
Query:    1 MELTVIPQPQLHPKCLPSLCLKSRVCVFHTTPNPTSPPLQASIYSLNPRILTPFIHPRNISTAALTGGDKTSTFPIDSGSRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
            MELT +PQPQLHPK L    LKSRV VF T PNPT PP QASI+S NPR +TP    RNISTAAL  G+ TSTFP+DSGSRIGEVKRVTKETNVSVKINLDG+GVADSSSGIPFLDHMLDQLASHGLFDVHVKATGD HIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHL YDL +PTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYD+RRHGTIP S  +   S
Sbjct:    1 MELT-LPQPQLHPKSLSFPSLKSRVSVFQTKPNPTCPPFQASIFSTNPRKITPLNPSRNISTAALVDGNNTSTFPLDSGSRIGEVKRVTKETNVSVKINLDGTGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDTHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLGYDLKLPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDTRRHGTIPRSMEIRQSS 276
[Close]
BLAST of rna-XM_004496669.3 vs. UniProtKB/TrEMBL
Match: tr|A0A072VQG6|A0A072VQG6_MEDTR (Imidazoleglycerol-phosphate dehydratase OS=Medicago truncatula OX=3880 GN=25485215 PE=1 SV=1)

HSP 1 Score: 468.003 bits (1203), Expect = 5.636e-165
Identity = 242/282 (85.82%), Postives = 254/282 (90.07%), Query Frame = 0 
Query:    1 MELTVIPQPQLHPKCLPSLCLKS-RVCVFHT-TPNPTSPPLQASIYSLNPRILTPFIHPRNISTAALTGGD---KTSTFPIDSGSRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
            MELT +PQ QLHPK LP   LKS RV VFHT TP PTSP  QASI+SLNPR      +PRNISTAAL  G+    +STFPIDSG+RIGE+KRVTKETNVSVKINLDG+GVAD+SSGIPFLDHMLDQLASHGLFDVHVKATGD HIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHL YDL+IPTQRVG YDTQLVEHFFQSLVNTSGMTLHIRQF+GTNSHHIIEATFKAFARALRQATEYD+RR GTIPSSKGVLSRS
Sbjct:    1 MELT-LPQTQLHPKYLPFPSLKSSRVSVFHTITPVPTSPLFQASIFSLNPR------NPRNISTAALVDGNGNSTSSTFPIDSGARIGEMKRVTKETNVSVKINLDGTGVADNSSGIPFLDHMLDQLASHGLFDVHVKATGDTHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLGYDLNIPTQRVGKYDTQLVEHFFQSLVNTSGMTLHIRQFSGTNSHHIIEATFKAFARALRQATEYDTRRRGTIPSSKGVLSRS 275
[Close]
BLAST of rna-XM_004496669.3 vs. UniProtKB/TrEMBL
Match: tr|I3SDM5|I3SDM5_MEDTR (Imidazoleglycerol-phosphate dehydratase OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 466.848 bits (1200), Expect = 1.705e-164
Identity = 242/282 (85.82%), Postives = 253/282 (89.72%), Query Frame = 0 
Query:    1 MELTVIPQPQLHPKCLPSLCLKS-RVCVFHT-TPNPTSPPLQASIYSLNPRILTPFIHPRNISTAALTGGDKTST---FPIDSGSRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
            MELT +PQ QLHPK LP   LKS RV VFHT TP PTSP  QASI+SLNPR      +PRNISTAAL  G+  ST   FPIDSG+RIGE+KRVTKETNVSVKINLDG+GVAD+SSGIPFLDHMLDQLASHGLFDVHVKATGD HIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHL YDL+IPTQRVG YDTQLVEHFFQSLVNTSGMTLHIRQF+GTNSHHIIEATFKAFARALRQATEYD+RR GTIPSSKGVLSRS
Sbjct:    1 MELT-LPQTQLHPKYLPFPSLKSSRVSVFHTITPVPTSPLFQASIFSLNPR------NPRNISTAALVDGNGNSTSPTFPIDSGARIGEMKRVTKETNVSVKINLDGTGVADNSSGIPFLDHMLDQLASHGLFDVHVKATGDTHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLGYDLNIPTQRVGKYDTQLVEHFFQSLVNTSGMTLHIRQFSGTNSHHIIEATFKAFARALRQATEYDTRRRGTIPSSKGVLSRS 275
[Close]
BLAST of rna-XM_004496669.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D5ACR2|A0A9D5ACR2_PEA (Imidazoleglycerol-phosphate dehydratase OS=Pisum sativum OX=3888 GN=KIW84_065626 PE=3 SV=1)

HSP 1 Score: 466.463 bits (1199), Expect = 2.106e-164
Identity = 232/269 (86.25%), Postives = 246/269 (91.45%), Query Frame = 0 
Query:    1 MELTVIPQPQLHPKCLPSLCLKSRVCVFHTTPNPTSPPLQASIYSLNPRILTPFIHPRNISTAALTGGDKTSTFPIDSGSRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPS 269
            MELT +PQPQLHPKCL    LKSRV VF TTP    PP QASI+S+N R LTP   PR+IST+AL GG+ TS  PIDSG+RIGEVKRVTKETNVSVKINLDGSG+ADSSSGIPFLDHMLDQLASHGLFDVHVKATGD+HIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHL YDLD+P+QRVGTYDTQLVEHFFQSLVNTSGMTLHIR+F+GTNSHHIIEATFKAFARALRQATEYD+RR GTIPS
Sbjct:    1 MELT-LPQPQLHPKCLQFPSLKSRVSVFQTTP---YPPFQASIFSVNQRYLTPLNTPRSISTSALLGGNNTSVSPIDSGARIGEVKRVTKETNVSVKINLDGSGIADSSSGIPFLDHMLDQLASHGLFDVHVKATGDVHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLGYDLDLPSQRVGTYDTQLVEHFFQSLVNTSGMTLHIRKFSGTNSHHIIEATFKAFARALRQATEYDTRRRGTIPS 265
[Close]
BLAST of rna-XM_004496669.3 vs. UniProtKB/TrEMBL
Match: tr|A0A396K289|A0A396K289_MEDTR (Imidazoleglycerol-phosphate dehydratase OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr1g0205441 PE=3 SV=1)

HSP 1 Score: 466.463 bits (1199), Expect = 4.560e-164
Identity = 242/282 (85.82%), Postives = 254/282 (90.07%), Query Frame = 0 
Query:    1 MELTVIPQPQLHPKCLPSLCLKS-RVCVFHT-TPNPTSPPLQASIYSLNPRILTPFIHPRNISTAALTGGD---KTSTFPIDSGSRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
            MELT +PQ QLHPK LP   LKS RV VFHT TP PTSP  QASI+SLNPR      +PRNISTAAL  G+    +STFPIDSG+RIGE+KRVTKETNVSVKINLDG+GVAD+SSGIPFLDHMLDQLASHGLFDVHVKATGD HIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHL YDL+IPTQRVG YDTQLVEHFFQSLVNTSGMTLHIRQF+GTNSHHIIEATFKAFARALRQATEYD+RR GTIPSSKGVLSRS
Sbjct:   20 MELT-LPQTQLHPKYLPFPSLKSSRVSVFHTITPVPTSPLFQASIFSLNPR------NPRNISTAALVDGNGNSTSSTFPIDSGARIGEMKRVTKETNVSVKINLDGTGVADNSSGIPFLDHMLDQLASHGLFDVHVKATGDTHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLGYDLNIPTQRVGKYDTQLVEHFFQSLVNTSGMTLHIRQFSGTNSHHIIEATFKAFARALRQATEYDTRRRGTIPSSKGVLSRS 294
[Close]
BLAST of rna-XM_004496669.3 vs. UniProtKB/TrEMBL
Match: tr|C6T988|C6T988_SOYBN (Imidazoleglycerol-phosphate dehydratase OS=Glycine max OX=3847 GN=100804707 PE=2 SV=1)

HSP 1 Score: 462.225 bits (1188), Expect = 1.294e-162
Identity = 234/279 (83.87%), Postives = 246/279 (88.17%), Query Frame = 0 
Query:    1 MELTVIPQPQLHPKCLPSLCLKSRVCVFHTTPNPTSPPLQASIYSLNPRILTPFIHPRNISTAALTGGDK--TSTFPIDSGSRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
            MEL+    P L  +C  SL L SRV VFHT PNPT PP QASI+SLN R LTP   PRN+S+AAL G +   T+T PIDS +RIGEVKRVTKETNVSVKINLDGSGVADSS+GIPFLDHMLDQLASHGL DVHVKATGDIHIDDHHTNEDVALAIGTALL ALGDRKGINRFGNFSAPLDEAL+HVSLDLSGRPHLSY+LDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHI+Q AG NSHHIIEATFKAFARALRQATEYD RR GTIPSSKGVLSRS
Sbjct:    1 MELSAPSSPSLL-RCPSSLLLNSRVRVFHTIPNPTRPPFQASIFSLNQRNLTPMDLPRNVSSAALVGDNASATTTLPIDSDARIGEVKRVTKETNVSVKINLDGSGVADSSTGIPFLDHMLDQLASHGLLDVHVKATGDIHIDDHHTNEDVALAIGTALLHALGDRKGINRFGNFSAPLDEALIHVSLDLSGRPHLSYNLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIQQLAGKNSHHIIEATFKAFARALRQATEYDPRRRGTIPSSKGVLSRS 278
[Close]
BLAST of rna-XM_004496669.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445F521|A0A445F521_GLYSO (Imidazoleglycerol-phosphate dehydratase OS=Glycine soja OX=3848 GN=D0Y65_054124 PE=3 SV=1)

HSP 1 Score: 459.914 bits (1182), Expect = 8.069e-162
Identity = 233/279 (83.51%), Postives = 246/279 (88.17%), Query Frame = 0 
Query:    1 MELTVIPQPQLHPKCLPSLCLKSRVCVFHTTPNPTSPPLQASIYSLNPRILTPFIHPRNISTAALTGGDK--TSTFPIDSGSRIGEVKRVTKETNVSVKINLDGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFARALRQATEYDSRRHGTIPSSKGVLSRS 277
            MEL+    P L  +C  SL L SRV VFHT P+PT PP QASI+SLN R LTP   PRN+S+AAL G +   T+T PIDS +RIGEVKRVTKETNVSVKINLDGSGVADSS+GIPFLDHMLDQLASHGL DVHVKATGDIHIDDHHTNEDVALAIGTALL ALGDRKGINRFGNFSAPLDEAL+HVSLDLSGRPHLSY+LDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHI+Q AG NSHHIIEATFKAFARALRQATEYD RR GTIPSSKGVLSRS
Sbjct:    1 MELSAPSSPSLL-RCPSSLLLNSRVRVFHTIPSPTRPPFQASIFSLNQRNLTPMDLPRNVSSAALVGDNASATTTLPIDSDARIGEVKRVTKETNVSVKINLDGSGVADSSTGIPFLDHMLDQLASHGLLDVHVKATGDIHIDDHHTNEDVALAIGTALLHALGDRKGINRFGNFSAPLDEALIHVSLDLSGRPHLSYNLDIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIQQLAGKNSHHIIEATFKAFARALRQATEYDPRRRGTIPSSKGVLSRS 278
The following BLAST results are available for this feature:
BLAST of rna-XM_004496669.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 5
Match NameE-valueIdentityDescription
|4.842e-13190.86Symbols: HISN5A, IGPD | imidazoleglycerol-phosphat... [more]
|3.079e-12982.38Symbols: HISN5B | HISTIDINE BIOSYNTHESIS 5B | chr4... [more]
|2.886e-12379.56Symbols: HISN5B | HISTIDINE BIOSYNTHESIS 5B | chr4... [more]
|1.289e-12281.65Symbols: HISN5B | HISTIDINE BIOSYNTHESIS 5B | chr4... [more]
|5.152e-8489.39Symbols: HISN5A, IGPD | imidazoleglycerol-phosphat... [more]
back to top
BLAST of rna-XM_004496669.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q43072|HIS7_PEA1.541e-14175.28Imidazoleglycerol-phosphate dehydratase, chloropla... [more]
sp|P34047|HIS5A_ARATH4.610e-13090.86Imidazoleglycerol-phosphate dehydratase 1, chlorop... [more]
sp|O23346|HIS5B_ARATH2.932e-12882.38Imidazoleglycerol-phosphate dehydratase 2, chlorop... [more]
sp|W5AWH5|HIS7C_WHEAT9.498e-12872.01Imidazoleglycerol-phosphate dehydratase 3, chlorop... [more]
sp|P34048|HIS7A_WHEAT3.329e-12682.27Imidazoleglycerol-phosphate dehydratase 1, chlorop... [more]
sp|W5BGD1|HIS7B_WHEAT6.011e-12681.90Imidazoleglycerol-phosphate dehydratase 2, chlorop... [more]
sp|A9BDS9|HIS7_PROM42.270e-9769.54Imidazoleglycerol-phosphate dehydratase OS=Prochlo... [more]
sp|Q3AN36|HIS7_SYNSC4.151e-9767.68Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
sp|A5GID0|HIS7_SYNPW4.196e-9767.51Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
sp|Q3B0A6|HIS7_SYNS96.279e-9768.02Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
back to top
BLAST of rna-XM_004496669.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2XZ09|A0A1S2XZ09_CICAR0.000e+0100.00Imidazoleglycerol-phosphate dehydratase OS=Cicer a... [more]
tr|A0A9D5AAG6|A0A9D5AAG6_PEA1.472e-17086.64Imidazoleglycerol-phosphate dehydratase OS=Pisum s... [more]
tr|A0A2Z6PDB6|A0A2Z6PDB6_TRISU2.482e-17087.41Imidazoleglycerol-phosphate dehydratase OS=Trifoli... [more]
tr|A0A2K3N005|A0A2K3N005_TRIPR1.728e-16986.28Imidazoleglycerol-phosphate dehydratase OS=Trifoli... [more]
tr|A0A072VQG6|A0A072VQG6_MEDTR5.636e-16585.82Imidazoleglycerol-phosphate dehydratase OS=Medicag... [more]
tr|I3SDM5|I3SDM5_MEDTR1.705e-16485.82Imidazoleglycerol-phosphate dehydratase OS=Medicag... [more]
tr|A0A9D5ACR2|A0A9D5ACR2_PEA2.106e-16486.25Imidazoleglycerol-phosphate dehydratase OS=Pisum s... [more]
tr|A0A396K289|A0A396K289_MEDTR4.560e-16485.82Imidazoleglycerol-phosphate dehydratase OS=Medicag... [more]
tr|C6T988|C6T988_SOYBN1.294e-16283.87Imidazoleglycerol-phosphate dehydratase OS=Glycine... [more]
tr|A0A445F521|A0A445F521_GLYSO8.069e-16283.51Imidazoleglycerol-phosphate dehydratase OS=Glycine... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:3.30.230.40:FF:000003coord: 73..168
e-value: 7.8E-42
score: 143.5
NoneNo IPR availableFUNFAMG3DSA:3.30.230.40:FF:000002coord: 169..274
e-value: 9.4E-58
score: 194.9
IPR038494Imidazole glycerol phosphate dehydratase domain superfamilyGENE3D3.30.230.40Imidazole glycerol phosphate dehydratase; domain 1coord: 169..277
e-value: 4.0E-48
score: 163.9
IPR038494Imidazole glycerol phosphate dehydratase domain superfamilyGENE3D3.30.230.40Imidazole glycerol phosphate dehydratase; domain 1coord: 69..168
e-value: 7.6E-39
score: 133.7
IPR000807Imidazoleglycerol-phosphate dehydratasePFAMPF00475IGPDcoord: 111..253
e-value: 3.4E-60
score: 213.8
IPR000807Imidazoleglycerol-phosphate dehydratasePANTHERPTHR23133IMIDAZOLEGLYCEROL-PHOSPHATE DEHYDRATASE HIS7coord: 75..275
IPR000807Imidazoleglycerol-phosphate dehydrataseHAMAPMF_00076HisBcoord: 81..274
score: 41.683014
IPR000807Imidazoleglycerol-phosphate dehydrataseCDDcd07914IGPDcoord: 83..274
e-value: 1.31744E-121
score: 343.613
IPR020568Ribosomal protein uS5 domain 2-type superfamilySUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 166..258
IPR020568Ribosomal protein uS5 domain 2-type superfamilySUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 81..165

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_004496669.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496669.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496669.3; organism=Cicer arietinum; type=mRNA; length=834bp
ATGGAGCTTACTGTAATACCTCAACCACAACTGCATCCAAAATGCCTTCC
ATCCCTGTGTCTCAAATCTAGGGTTTGTGTTTTTCATACAACACCGAACC
CAACATCCCCACCTTTACAAGCTTCAATCTATTCACTCAATCCCCGCATT
CTCACCCCATTTATTCATCCCAGAAACATCTCCACCGCTGCTTTGACGGG
TGGCGACAAAACTTCAACTTTCCCAATTGACTCAGGTTCTAGAATTGGAG
AAGTGAAAAGGGTTACCAAGGAAACTAATGTATCAGTCAAAATTAACCTG
GATGGTTCTGGAGTTGCTGATAGTAGTTCTGGAATTCCCTTCCTCGATCA
TATGCTTGATCAACTTGCTTCACATGGACTGTTTGACGTACATGTAAAGG
CTACAGGTGATATACATATTGATGACCATCACACGAATGAAGATGTTGCT
CTTGCTATTGGAACGGCTCTGCTGCAGGCTCTTGGTGATAGGAAGGGTAT
TAACCGGTTTGGTAACTTCTCTGCTCCACTTGATGAAGCATTAGTTCACG
TTTCTCTGGATTTGTCTGGCCGACCACATCTAAGTTATGATTTGGACATA
CCTACTCAGAGGGTTGGGACATATGACACTCAGTTGGTGGAGCATTTTTT
CCAGTCATTGGTGAACACATCTGGTATGACCCTTCACATTCGACAGTTTG
CTGGAACAAATTCCCATCATATTATTGAGGCAACTTTCAAAGCATTTGCT
AGGGCTCTTAGACAAGCGACAGAGTATGATTCACGTCGCCATGGAACAAT
ACCAAGTTCAAAAGGGGTTCTGTCGCGTAGTTAA
back to top

protein sequence of rna-XM_004496669.3_CaCDCfrontier-NCBI_v1

>rna-XM_004496669.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496669.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496669.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=277bp
MELTVIPQPQLHPKCLPSLCLKSRVCVFHTTPNPTSPPLQASIYSLNPRI
LTPFIHPRNISTAALTGGDKTSTFPIDSGSRIGEVKRVTKETNVSVKINL
DGSGVADSSSGIPFLDHMLDQLASHGLFDVHVKATGDIHIDDHHTNEDVA
LAIGTALLQALGDRKGINRFGNFSAPLDEALVHVSLDLSGRPHLSYDLDI
PTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQFAGTNSHHIIEATFKAFA
RALRQATEYDSRRHGTIPSSKGVLSRS
back to top

mRNA from alignment at chr4:13715510..13719018-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_004496669.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496669.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496669.3; organism=Cicer arietinum; type=mRNA; length=3509bp; location=Sequence derived from: chr4:13715510..13719018- (Cicer arietinum
TGTTTTTTGGTTTATGAGACTGAATTGAGTAACACTACAAACAAGACAGA
CAAAAACAAGATCTCCCAATGCCATAATTTTTCCATCTGTTCTCGAAAAT
TTACTCTCGTTGTTTGTAGTTTGATTTCACAGTCACAATCTGAATTGAAT
GGAGCTTACTGTAATACCTCAACCACAACTGCATCCAAAATGCCTTCCAT
CCCTGTGTCTCAAATCTAGGGTTTGTGTTTTTCATACAACACCGAACCCA
ACATCCCCACCTTTACAAGCTTCAATCTATTCACTCAATCCCCGCATTCT
CACCCCATTTATTCATCCCAGAAACATCTCCACCGCTGCTTTGACGGGTG
GCGACAAAACTTCAACTTTCCCAATTGACTCAGGTCTTTCTTCTTTTTCC
TCACCCCTGCCCCTTTTAAGATTTTGTAGTTTTTCAAATGAAAGTTGATT
ACTTTTTTTTTTTTAATTATAATTTTTAGGTTCTAGAATTGGAGAAGTGA
AAAGGGTTACCAAGGAAACTAATGTATCAGTCAAAATTAACCTGGATGGT
TCTGGAGTTGCTGATAGTAGTTCTGGAATTCCCTTCCTCGATCATATGCT
TGATGTCAGTATTTTCAATTCAATTGCTATTATGCTTCTATTACTTTGTA
TTATCTATGTTGCACTGGACGTGACACTTACATGTAAGCACCAATAACAT
TTTTTCAATCACTGGCATGCACACACTACTCAAAAATAAATGTTTCAAGG
TCAGAATGTGTATTATTCCATTGTGAGTTCTTGCAATGGTAGACTACATA
CTGAGCATGGAAATCATGTAGTAGATATATTATATAAAGGGTTTTTCTTT
TTAATTTGTCTCCTTTTTAACTTGAAAACTACTAGTCAATAGTCATTAAG
GCTGTTATGAATTTAAAAGTTAAAATTGTTGAATGGATGGATACACCATT
TATCGGAACAAACTTGGTTGTGATTTTTTCAGCAACTTGCTTCACATGGA
CTGTTTGACGTACATGTAAAGGCTACAGGTGATATACATATTGATGACCA
TCACACGAATGAAGATGTTGCTCTTGCTATTGGAACGGTACTGCCAACAG
CCAAGTGAGCTGTGTATTTCTTTTCTTTTTGGCTCAATTTATTACAGTTG
TTCCTGGAAAGTCAAACATGTTTCACTATCTTAGGTTGAGGATATTGCTT
AAAGATTGGGGTGCAAGTTATATATTTGCATTTGACTTTGTCCTTTCTAT
GCAAAATGCAATCCAACTAATTGACAACAACTCTTAACAGTTATAACAAT
GATTATATTATTATGATAGCGGTGATTTTCAATTAATTCAGAGCTTTGTT
TTTTTAGTAAATTTGCGTCTGTCTATCATCGTACTAAAAGTTAGATTTCT
ATTACTTCGTGTCTAGGCTCTGCTGCAGGCTCTTGGTGATAGGAAGGGTA
TTAACCGGTTTGGTAACTTCTCTGCTCCACTTGATGAAGCATTAGTTCAC
GTTTCTCTGGTAATTTGCATACTGTTTGTAGCAATAATCGTATACTCTCT
GTTGAAGGATTAAGTTAATGTTTGTTTGGGGAATAAGTATGTTTTGCCCT
TGCTTACAAATATGGTGAATGGATGAAGAAACTTTGAAACAATGTAATGG
ATTTTGCATGTGTGACTTAACAACCATACATTATCACGTTGACTATCCAC
ATCTACAAATTTTGCGGTTCAAAAAGTTTAGGTATCAATGGGGCACCAGT
GAGCTTGTGGTGGGTCAAAGCTTTTTCATTTACTCTAGCAGCACTATTGA
AAATTTGAAATAACTAACCTGATCACATGTGTAAGCATATTTTTCCACTA
TAATTTTCTGTTCTATGCTTCACTATAGCTTTCCTCCCTTACCTTGTCCA
GGATTTGTCTGGCCGACCACATCTAAGTTATGATTTGGACATACCTACTC
AGAGGGTTGGGACATATGACACTCAGGTAATACATGTTTGTTTAATTACT
TCATGGTTCAGTTTAGAATTTTGTTTAGATAGCTTTTGATTATTGAGCTT
CAAATTTATCCAGACCAGATGCTTTTTATAATGTGTGTCATTTATCTTGT
TCTTTTTACTTATCGATGAGTCCTCTTAATATCCTTTATAGTTGGTGGAG
CATTTTTTCCAGTCATTGGTGAACACATCTGGTATGACCCTTCACATTCG
ACAGGTACTGATACATAGAATATAGGTTAGAGTCAGTTATAGTAATTGCA
TTTATAAGTATATATCTGTACATTTCATTACTCTTTCCGTCTCACAATGA
GTGTCACTTTAGAAGAAAAAATTTGTCTCAAAATAAATGTCATTCACAAT
TTTCAATGGAACTTTAATTAATCTTTTCTTATACTACCCTTCAATGATTA
CTATAAATACAACTTTCAAAATATTATTATAGTTTGCATTGATAATTGTA
AAAACTCACCAATATTAAGATGGTAATTTGGTAAAATAACTTCTCACCTT
CTTCTAATTATTGCATTTCTTAATATATGTGCAAAAATCTTAAGTGACAC
TCATTCTAAGACGGAGAGAGTATGAAAAAACATATCAAATTTTATAGATG
TTTTACAAGAGCTAGGTGTTCTTTCTACATTCTTCGTGCATTGATTACAC
ATTCCAGCCTCAATTTTCGGGGGCTTTTTTTTTTTTTAATATGTATTTCA
TTCCAATTTTGAATTCATCTGAGCACAGTTTGCTGGAACAAATTCCCATC
ATATTATTGAGGCAACTTTCAAAGCATTTGCTAGGGCTCTTAGACAAGCG
ACAGAGTATGATTCACGTCGCCATGGAACAATACCAAGGTCTAGTATCTC
TAAAAAAAAATTACATTTTTCTCCTTGTCATTTGATTACAACAAGATAAT
CTCTCTGCTCCTGGATTGAATGTTCTATTCCTTGTTTATAGTCCGAGGAT
AGAATAATCAATTTTAGTAGTTTAAAGAAGAAAAAACTCATGTTCAAATA
AAAATTTTCCCTCCGACAATATAAATTAAGGAATATTGATCAACATATTA
ACTGATACTAGCTGATAACTGTAAGTCAGTTTTTTTCTATTAACACTGTT
TAAATTTCGTCGAATGTGCTTGTCATGTAAAACTAACACACTCCCCCGGG
TATGTGCAGTTCAAAAGGGGTTCTGTCGCGTAGTTAATATCTTCAGCTGC
TATCCGTAATTGGATCGAGCTACTTACATCTGCAGTTCATCAAGCATATG
CATCCAAACAGTCCTTACTGCAGTTCATCTTCATATGCATCCAAATGGCT
CTAGTCTCTGTAAACATCACAACATAGTAGTTGTATTCATATTTATTCTA
GAGTGTTTAAATTACTTTTCTGGTTACCTTTCTTTTGTACATACGATTCA
GGCAACAAGAGAAACTTGAGAATCCGTTTCAATAAGAATATTCTGTAATA
GAATAATCGATAGATGTTAATTTTCAGTAAAAAAAGAAATAGATGTTAAT
TTTCAAAAA
back to top

Coding sequence (CDS) from alignment at chr4:13715510..13719018-

>rna-XM_004496669.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496669.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496669.3; organism=Cicer arietinum; type=CDS; length=834bp; location=Sequence derived from: chr4:13715510..13719018- (Cicer arietinum
ATGGAGCTTACTGTAATACCTCAACCACAACTGCATCCAAAATGCCTTCC
ATCCCTGTGTCTCAAATCTAGGGTTTGTGTTTTTCATACAACACCGAACC
CAACATCCCCACCTTTACAAGCTTCAATCTATTCACTCAATCCCCGCATT
CTCACCCCATTTATTCATCCCAGAAACATCTCCACCGCTGCTTTGACGGG
TGGCGACAAAACTTCAACTTTCCCAATTGACTCAGGTTCTAGAATTGGAG
AAGTGAAAAGGGTTACCAAGGAAACTAATGTATCAGTCAAAATTAACCTG
GATGGTTCTGGAGTTGCTGATAGTAGTTCTGGAATTCCCTTCCTCGATCA
TATGCTTGATCAACTTGCTTCACATGGACTGTTTGACGTACATGTAAAGG
CTACAGGTGATATACATATTGATGACCATCACACGAATGAAGATGTTGCT
CTTGCTATTGGAACGGCTCTGCTGCAGGCTCTTGGTGATAGGAAGGGTAT
TAACCGGTTTGGTAACTTCTCTGCTCCACTTGATGAAGCATTAGTTCACG
TTTCTCTGGATTTGTCTGGCCGACCACATCTAAGTTATGATTTGGACATA
CCTACTCAGAGGGTTGGGACATATGACACTCAGTTGGTGGAGCATTTTTT
CCAGTCATTGGTGAACACATCTGGTATGACCCTTCACATTCGACAGTTTG
CTGGAACAAATTCCCATCATATTATTGAGGCAACTTTCAAAGCATTTGCT
AGGGCTCTTAGACAAGCGACAGAGTATGATTCACGTCGCCATGGAACAAT
ACCAAGTTCAAAAGGGGTTCTGTCGCGTAGTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR038494IGPD_sf
IPR000807ImidazoleglycerolP_deHydtase
IPR020568Ribosomal_Su5_D2-typ_SF
Vocabulary: Molecular Function
TermDefinition
GO:0004424imidazoleglycerol-phosphate dehydratase activity
Vocabulary: Biological Process
TermDefinition
GO:0000105L-histidine biosynthetic process