rna-XM_004496675.3
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_004496675.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:9383602-9385962 FORWARD LENGTH=786) HSP 1 Score: 1032.71 bits (2669), Expect = 0.000e+0 Identity = 498/786 (63.36%), Postives = 614/786 (78.12%), Query Frame = 0 Query: 1 METPKPHFHS---DAYVHLLQSAI-KSRDSFTGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 M+ P P S + +LLQ ++ KS FT + +H R+IK GL F+V+LMNNL+N YSKTG A ++F+EMPL+T FSWNTVLSAY+K G +++ FD++PQ DSVSWTT+I+GY G ++ A+++ MV GI PTQFT T VLAS AAT ++ G+KVHSFIVKLG G V V+NSL+NMYAK GD +MAK VFD M ++D S+WN MI+LHMQ G++D+A+A F QM + DIVTWNS+I+G+ +G+D +AL+ FS M R S L PD+FTL SVLSACANLE L +GKQ+H++IV DISG NALISMY++ G VE AR ++E RGT L + FT+LLDGY+K+GD++ A+ IF SLK RDVVAWTAMIVGY Q+G A+ LFRSM+ G RPNSYTLAA+LSV SSLASL GKQ+H +A++ E+ SVSV NALITMY+++G+I A + F+ I +RDT++WTSMIIALAQHG EA+ELFE ML L+PDHITYVGV SACTH GLV QG+ YF++MK+V I PT SHYACM+DLFGRAGLL+EA FI MPIEPDV+ WGSLLS+CRVHKN+DL KVAAE+L L++P NSGAYSALAN SACGKW +AAK+RK MKD VKKEQG SW+++ +KVH+FGVED HP+++ IY + KIW EIKKMG+ PDT SVLHDLE+EVKEQILRHHSEKLAIAF LI++P TLRIMKNLRVCNDCH+AIK+IS LVGREIIVRD TRFHHFKDG CSC+DYW Sbjct: 1 MDAPVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
BLAST of rna-XM_004496675.3 vs. Araport11
Match: | (Symbols: OTP90 | d ORGANELLAR TRANSCRIPT PROCESSING 90 | chr1:8894428-8896800 FORWARD LENGTH=790) HSP 1 Score: 575.089 bits (1481), Expect = 0.000e+0 Identity = 297/762 (38.98%), Postives = 467/762 (61.29%), Query Frame = 0 Query: 30 RFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIP--QPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIG-RKVHSFIVKLGFSGVVPVANSLVNMYAK--SGDSLM--AKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDP-DIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEV-KEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 R +H II G ++N L++ Y K+ A ++F+E+ + T++S Y G I AR +F++ P D+V + +I G++ +A+ +F +M G P FTF VLA A + + H+ +K G + V+N+LV++Y+K S SL+ A+ VFD + KD+ +W M++ +++ G D+ L M D +V +N++I+GY ++G +ALE M SS ++ D+FT SV+ ACA L+LGKQVHAY++R + D S N+L+S+Y K G + AR I E + +++++ +LL GYV G + A+ IF +K +++++W MI G A+NG L+LF M EG P Y + + + L + G+Q HA +++ SS+S GNALITMY++ G +++AR+VF + D+++W ++I AL QHG G EA++++E+MLK ++PD IT + VL+AC+H GLV+QG+ YF+ M+ VY I P A HYA +IDL R+G +A + I S+P +P W +LLS CRVH N++L +AA+KLF + P + G Y L+N +A G+W + A+VRKLM+DR VKKE SW+++ +VH F V+D HP+ +A+Y + + KE++++G+ PDT VLHD+E + KE +L HSEK+A+AF L+ P T+RI KNLR C DCH+ +++S +V R+II+RD RFHHF++G CSC ++W Sbjct: 34 RAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMV-SSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFE--KMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790 HSP 2 Score: 64.6994 bits (156), Expect = 2.643e-10 Identity = 48/193 (24.87%), Postives = 84/193 (43.52%), Query Frame = 0 Query: 28 TGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVAN---SLVNMYAKSGDSLMAKVVFDSMRLKDKST-WNIMIS 216 G+ HA+++K G ++ N L+ Y+K G EA +VF MP + SWN +++A + GH A +++E M+ GI P + T VL +C+ G +D GRK + + + P A+ L+++ +SG A+ V +S+ K + W ++S Sbjct: 435 NGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEE-------------------------------MLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETV--YRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLS 594
BLAST of rna-XM_004496675.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:25918314-25920545 FORWARD LENGTH=743) HSP 1 Score: 574.704 bits (1480), Expect = 0.000e+0 Identity = 296/754 (39.26%), Postives = 445/754 (59.02%), Query Frame = 0 Query: 30 RFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSS-GISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 + IH II+ + FL NN+++ Y+ S T A RVF+ +P FSWN +L AY+K G I F+++P D V+W +I GY+ GL AV+ + M+ + T+ T +L ++ G + +G+++H ++KLGF + V + L+ MYA G AK VF + ++ +N ++ + CG ++ AL LF M + D V+W ++I G G +A+E F +M + LK D++ GSVL AC L ++ GKQ+HA I+R + G+ALI MY K + A+T +FD +K ++VV+WTAM+VGY Q G A A+++F M G P+ YTL +S ++++SL+ G Q H AI + V+V N+L+T+Y + G I D+ ++FN+++ RD ++WT+M+ A AQ G E I+LF+ M++ LKPD +T GV+SAC+ GLVE+G+ YF LM + Y I P+ HY+CMIDLF R+G LEEA FI MP PD I W +LLS+CR N+++ K AAE L +DP++ Y+ L++ ++ GKW A++R+ M+++ VKKE G SW++ K+H F +D P D IY + ++ +I G+ PDT V HD+E+ VK ++L +HSE+LAIAF LI P +R+ KNLRVC DCH+A K+IS + GREI+VRDA RFH FKDG+CSC D+W Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREM-KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKT---------------------------------VFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV-RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743 HSP 2 Score: 202.986 bits (515), Expect = 4.995e-55 Identity = 126/463 (27.21%), Postives = 217/463 (46.87%), Query Frame = 0 Query: 29 GRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQ-LHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHG 490 G+ IH ++IK G + + + LL Y+ G ++A +VF + + T +N+++ G IE A ++F + + DSVSW +I G Q GL A++ F M G+ Q+ F VL +C G ++ G+++H+ I++ F + V ++L++MY K AK VFD M+ K+ +W M+ + Q GR + +A++ F DM R S + PD +TLG +SACAN+ SL+ G Q H + + + N+L+++Y K GD+ + +F+ + RD V+WTAM+ YAQ G A ++LF M+ G +P+ TL V+S S ++ G++ V S+ + +I ++SRSG +++A + N + D + WT+++ A G Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAE-------------------------------EAVKIFLDMQR-SGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC---------------------------------GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554 HSP 3 Score: 109.383 bits (272), Expect = 2.796e-24 Identity = 90/345 (26.09%), Postives = 144/345 (41.74%), Query Frame = 0 Query: 29 GRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTD----PDIVTWNSIIAGYCHQGHDSKALETFS-------------------DMF-RSSSLK------------PDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALI-SMYAKSGAVEIARTIVELR 336 G+ IHA II+ +++ + L++ Y K A VF+ M K SW ++ Y + G E AV++FL M SGI P +T + +++CA +L+ G + H + G V V+NSLV +Y K GD + +F+ M ++D +W M+S + Q GR + LF +M PD VT +I+ G K F D+F RS L+ PD ++LSAC N +L++GK ++ ++D AG L+ S+YA G + ++ +LR Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAE-------------------------------EAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLI--ELDPHHPAGYTLLSSIYASKGKWD---SVAQLR 597
BLAST of rna-XM_004496675.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:25918392-25920545 FORWARD LENGTH=717) HSP 1 Score: 573.548 bits (1477), Expect = 0.000e+0 Identity = 296/753 (39.31%), Postives = 444/753 (58.96%), Query Frame = 0 Query: 31 FIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSS-GISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 IH II+ + FL NN+++ Y+ S T A RVF+ +P FSWN +L AY+K G I F+++P D V+W +I GY+ GL AV+ + M+ + T+ T +L ++ G + +G+++H ++KLGF + V + L+ MYA G AK VF + ++ +N ++ + CG ++ AL LF M + D V+W ++I G G +A+E F +M + LK D++ GSVL AC L ++ GKQ+HA I+R + G+ALI MY K + A+T +FD +K ++VV+WTAM+VGY Q G A A+++F M G P+ YTL +S ++++SL+ G Q H AI + V+V N+L+T+Y + G I D+ ++FN+++ RD ++WT+M+ A AQ G E I+LF+ M++ LKPD +T GV+SAC+ GLVE+G+ YF LM + Y I P+ HY+CMIDLF R+G LEEA FI MP PD I W +LLS+CR N+++ K AAE L +DP++ Y+ L++ ++ GKW A++R+ M+++ VKKE G SW++ K+H F +D P D IY + ++ +I G+ PDT V HD+E+ VK ++L +HSE+LAIAF LI P +R+ KNLRVC DCH+A K+IS + GREI+VRDA RFH FKDG+CSC D+W Sbjct: 1 MIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREM-KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKT---------------------------------VFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV-RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 717 HSP 2 Score: 202.601 bits (514), Expect = 4.680e-55 Identity = 126/463 (27.21%), Postives = 217/463 (46.87%), Query Frame = 0 Query: 29 GRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQ-LHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHG 490 G+ IH ++IK G + + + LL Y+ G ++A +VF + + T +N+++ G IE A ++F + + DSVSW +I G Q GL A++ F M G+ Q+ F VL +C G ++ G+++H+ I++ F + V ++L++MY K AK VFD M+ K+ +W M+ + Q GR + +A++ F DM R S + PD +TLG +SACAN+ SL+ G Q H + + + N+L+++Y K GD+ + +F+ + RD V+WTAM+ YAQ G A ++LF M+ G +P+ TL V+S S ++ G++ V S+ + +I ++SRSG +++A + N + D + WT+++ A G Sbjct: 132 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAE-------------------------------EAVKIFLDMQR-SGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC---------------------------------GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 528 HSP 3 Score: 109.383 bits (272), Expect = 3.060e-24 Identity = 90/345 (26.09%), Postives = 144/345 (41.74%), Query Frame = 0 Query: 29 GRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTD----PDIVTWNSIIAGYCHQGHDSKALETFS-------------------DMF-RSSSLK------------PDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALI-SMYAKSGAVEIARTIVELR 336 G+ IHA II+ +++ + L++ Y K A VF+ M K SW ++ Y + G E AV++FL M SGI P +T + +++CA +L+ G + H + G V V+NSLV +Y K GD + +F+ M ++D +W M+S + Q GR + LF +M PD VT +I+ G K F D+F RS L+ PD ++LSAC N +L++GK ++ ++D AG L+ S+YA G + ++ +LR Sbjct: 263 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAE-------------------------------EAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLI--ELDPHHPAGYTLLSSIYASKGKWD---SVAQLR 571
BLAST of rna-XM_004496675.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:5543834-5546386 FORWARD LENGTH=850) HSP 1 Score: 550.436 bits (1417), Expect = 0.000e+0 Identity = 288/720 (40.00%), Postives = 426/720 (59.17%), Query Frame = 0 Query: 73 LKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSS-GISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDP----DIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSL--KCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEG--PRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVS-SVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 + F N +++ Y++ + AR++FDE+ D VSW +II Y + G A++MF RM + G P T VL CA+ GT +G+++H F V + V N LV+MYAK G A VF +M +KD +WN M++ + Q GR + A+ LF +M + D+VTW++ I+GY +G +AL M SS +KP++ TL SVLS CA++ +L GK++H Y ++ ID+ G N++ L+D Y K V AR +FDSL K RDVV WT MI GY+Q+G AN ALEL M E RPN++T++ L +SLA+L +GKQ+HA A+R ++ + + V N LI MY++ GSI DAR VF+ + +K + +TWTS++ HG G EA+ +F++M + K D +T + VL AC+H G+++QG YFN MK V+ + P HYAC++DL GRAG L A I MP+EP + W + LS CR+H V+L + AAEK+ + N+ G+Y+ L+N + G+W D ++R LM+ + VKK G SWV+ F V D HP IY+++ + IK +G+ P+T LHD++ E K+ +L HSEKLA+A+ ++ +P A +RI KNLRVC DCH+A Y+S ++ +II+RD++RFHHFK+GSCSC+ YW Sbjct: 159 ISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML-SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDL-------------------------RKNGHGDENMV-INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNE-VTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850 HSP 2 Score: 224.557 bits (571), Expect = 5.247e-62 Identity = 155/528 (29.36%), Postives = 255/528 (48.30%), Query Frame = 0 Query: 82 VLSAYAKGGHIETARRMFDEIPQPDS--VSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCR----DVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLE-------EVSSVSVGNALITMYSRSGSIKDARKVFNQISSK-RDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNL--KPDHITYVGVLSACTHVGLVEQGK-CYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVH 592 ++S Y G + A + P D+ W ++I Y G N + +F M S +P +TF V +C ++ G H+ + GF V V N+LV MY++ A+ VFD M + D +WN +I + + G+ VAL +F +MT+ +PD TL +VL CA+L + LGKQ+H + V +++ + GN L+ MYAK G ++ A T+ S +V+++ +++ GY +IG A +F+ ++ DVV W+A I GYAQ GL AL + R M+ G +PN TL +VLS +S+ +L GK++H AI+ V N LI MY++ + AR +F+ +S K RD +TWT MI +QHG N+A+EL +M + + +P+ T L AC + + GK + ++N + P C+ID++ + G + +A +M + + + W SL++ +H Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTN-------------------------------EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTV--FSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMH 557 HSP 3 Score: 194.897 bits (494), Expect = 8.449e-52 Identity = 136/495 (27.47%), Postives = 228/495 (46.06%), Query Frame = 0 Query: 29 GRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQP----DSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKL-------GFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKS--TWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADID-ISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGN----ALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHG---LGNEAIELFEDM 502 G+ +H + + +F+ N L++ Y+K G EA+ VF+ M +K SWN +++ Y++ G E A R+F+++ + D V+W+ I GY Q+GL A+ + +M+SSGI P + T VL+ CA+ G L G+++H + +K G V N L++MYAK A+ +FDS+ K++ TW +MI + Q G + AL L +M + D T +P+ FT+ L ACA+L +L++GKQ+HAY +R + + N LI MYAK G++ AR +FD++ ++ V WT+++ GY +G AL +F M G + + TL VL S +D G + R++ V VS G L+ + R+G + A ++ ++ + + W + + HG LG A E ++ Sbjct: 248 GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQT------------------------------RPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARL---------------------------------VFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFN---RMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITEL 676
BLAST of rna-XM_004496675.3 vs. Araport11
Match: | (Symbols: SSTPR | | chr4:1221116-1223461 REVERSE LENGTH=781) HSP 1 Score: 548.895 bits (1413), Expect = 0.000e+0 Identity = 273/756 (36.11%), Postives = 434/756 (57.41%), Query Frame = 0 Query: 28 TGRFIHA-RIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 TGR A R+ K ++ N +++ Y + G F A ++F+EMP + SWN ++ Y + ++ AR +F+ +P+ D SW T++ GY Q G + A +F RM ++ +L++ ++ + K + + N L+ + K + A+ FDSM ++D +WN +I+ + Q G++D A LF + D+ TW ++++GY +A E F M P++ + + NA+++ Y + +E+A+ + ++ NV + +++ GY + G +S A+ +FD + RD V+W AMI GY+Q+G + AL LF M EG R N + ++ LS + + +L+LGKQLH ++ + VGNAL+ MY + GSI++A +F +++ K D ++W +MI ++HG G A+ FE M + LKPD T V VLSAC+H GLV++G+ YF M Y + P + HYACM+DL GRAGLLE+A+N +++MP EPD WG+LL + RVH N +LA+ AA+K+F ++P NSG Y L+N ++ G+W D K+R M+D+ VKK G SW++I NK H F V D HP++D I+ + ++ +KK G+ T VLHD+E+E KE+++R+HSE+LA+A+ ++ +R++KNLRVC DCH+AIKY++ + GR II+RD RFHHFKDGSCSC DYW Sbjct: 77 TGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEA----CMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM-------PER---------------------------------NEVSWNAMLAGYVQGERMEMAKELFDV--MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
BLAST of rna-XM_004496675.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:8347200-8349347 FORWARD LENGTH=715) HSP 1 Score: 528.094 bits (1359), Expect = 6.391e-178 Identity = 272/710 (38.31%), Postives = 407/710 (57.32%), Query Frame = 0 Query: 78 SWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAK---SGDSLMAKVVFDSM--RLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 S + V+S Y + A +F + P ++W ++I + + LF+ A+ F+ M +SG P F VL SC L G VH FIV+LG + N+L+NMYAK G + VFD M R + ++ + +D +F M D+V++N+IIAGY G AL +M ++ LKPD FTL SVL + + GK++H Y++R ID G++L+ MYAKS +E + +F L CRD ++W +++ GY QNG N AL LFR M+ +P + ++V+ + LA+L LGKQLH +R S++ + +AL+ MYS+ G+IK ARK+F++++ D ++WT++I+ A HG G+EA+ LFE+M + +KP+ + +V VL+AC+HVGLV++ YFN M VY + HYA + DL GRAG LEEAYNFI M +EP W +LLSSC VHKN++LA+ AEK+F +D N GAY + N ++ G+W + AK+R M+ + ++K+ SW+++ NK H F D HP D I + + ++++K G+ DT VLHD+++E K ++L HSE+LA+AF +IN+ T+R+ KN+R+C DCH AIK+IS + REIIVRD +RFHHF G+CSC DYW Sbjct: 41 SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM-GTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIE---------------------------------DSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715 HSP 2 Score: 189.119 bits (479), Expect = 2.398e-50 Identity = 127/491 (25.87%), Postives = 232/491 (47.25%), Query Frame = 0 Query: 11 DAYVHLLQSAIKSRDSFTGRFIHARIIKHGLHFTVFLMNNLLNFYSK---TGSFTEAHRVFNEMPLKTTFSWNTVLSAYA--KGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLG-------KQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQH 489 + + +L+S D G +H I++ G+ ++ N L+N Y+K GS VF+EMP +T+ S + + A I++ RR+F+ +P+ D VS+ TII GY Q G++ A++M M ++ + P FT + VL + + G+++H ++++ G V + +SLV+MYAKS ++ VF + +D +WN +++ ++Q GR + AL LF QM ++ +KP SV+ ACA+L +L LGKQ+H Y++R + +AL+ MY+K G ++ AR+IFD + D V+WTA+I+G+A +G + A+ LF M +G +PN AVL+ S + +D +++ LE ++V+ + R+G +++A +++ + W++++ + + H Sbjct: 106 NVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMV--------------------------------TAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCG---------------------------------NIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA------DLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525 HSP 3 Score: 117.857 bits (294), Expect = 5.272e-27 Identity = 77/338 (22.78%), Postives = 164/338 (48.52%), Query Frame = 0 Query: 25 DSFTGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQM----TDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVE-LRGTSSLNVIAFTSLLDGYVKIG 357 D G+ IH +I+ G+ V++ ++L++ Y+K+ ++ RVF+ + + SWN++++ Y + G YN+ A+++F +MV++ + P F+ V+ +CA TL +G+++H ++++ GF + +A++LV+MY+K G+ A+ +FD M + D+ +W +I H G A++LF +M P+ V + +++ H G +A F+ M + L + +V L ++ + +I + ++ +G+ + L+S + +E+A + E + S N+ A+ + + Y G Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGR-------------------------YNE------ALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKL---EEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNG 560
BLAST of rna-XM_004496675.3 vs. Araport11
Match: | (Symbols: QED1, OTP81 | ORGANELLE TRANSCRIPT PROCESSING 81 | chr2:12712884-12715100 FORWARD LENGTH=738) HSP 1 Score: 514.612 bits (1324), Expect = 2.121e-172 Identity = 262/703 (37.27%), Postives = 412/703 (58.61%), Query Frame = 0 Query: 83 LSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVS-SGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIE-GPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDL-EQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 ++A + +E AR++FDEIP+P+S +W T+I Y ++ FL MVS S P ++TF ++ + A +L +G+ +H VK V VANSL++ Y CG LD A +F + + D+V+WNS+I G+ +G KALE F M S +K T+ VLSACA + +L+ G+QV +YI ++++ NA++ MY K G++E A+ + + + + +T++LDGY D ARE+ +S+ +D+VAW A+I Y QNG N AL +F + ++ + N TL + LS + + +L+LG+ +H+ + + V +ALI MYS+ G ++ +R+VFN + KRD W++MI LA HG GNEA+++F M + N+KP+ +T+ V AC+H GLV++ + F+ M++ Y I P HYAC++D+ GR+G LE+A FI +MPI P WG+LL +C++H N++LA++A +L ++P N GA+ L+N + GKW + +++RK M+ +KKE G S ++I +H F D HP + +Y + ++ +++K G+ P+ VL + E+E+KEQ L HSEKLAI + LI++ +R++KNLRVC DCHS K IS L REIIVRD RFHHF++G CSC D+W Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCY-------------------------------FSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM-ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFD--AMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738 HSP 2 Score: 194.126 bits (492), Expect = 5.783e-52 Identity = 120/415 (28.92%), Postives = 204/415 (49.16%), Query Frame = 0 Query: 77 FSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQL-HATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHG 490 F N+++ Y G +++A ++F I + D VSW ++I G+ QKG + A+++F +M S + + T VL++CA L+ GR+V S+I + + + +AN++++MY K G AK +FD+M KD TW M+ + + A + + M DIV WN++I+ Y G ++AL F ++ ++K ++ TL S LSACA + +L+LG+ +H+YI + I ++ +ALI MY+K GD+ +RE+F+S++ RDV W+AMI G A +G N A+++F M +PN T V S +D + L H V ++ + RSG ++ A K + T W +++ A H Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK---------------------------------CGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHA 548 HSP 3 Score: 137.502 bits (345), Expect = 3.287e-33 Identity = 80/267 (29.96%), Postives = 140/267 (52.43%), Query Frame = 0 Query: 14 VHLLQSAIKSRDSFTGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRM-VSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTD----PDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDK 275 V +L + K R+ GR + + I ++ ++ + L N +L+ Y+K GS +A R+F+ M K +W T+L YA E AR + + +PQ D V+W +I Y Q G N A+ +F + + + Q T L++CA G L++GR +HS+I K G V ++L++MY+K GD ++ VF+S+ +D W+ MI G + A+ +F++M + P+ VT+ ++ H G +A F M + + P++ Sbjct: 236 VGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEE 502
BLAST of rna-XM_004496675.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:7009570-7011852 FORWARD LENGTH=760) HSP 1 Score: 510.375 bits (1313), Expect = 1.855e-170 Identity = 261/730 (35.75%), Postives = 413/730 (56.58%), Query Frame = 0 Query: 62 TEAH-RVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMT----DPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCR----DVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 T+AH R+ + ++++Y+ A + IP P S++++I + LF ++ +F RM S G+ P + CA +G+++H G V S+ +MY + G A+ VFD M KD T + ++ + + G L+ + + +M + +IV+WN I++G+ G+ +A+ F + PD+ T+ SVL + + E L +G+ +H Y+++ + +A+I MY KSG + I + + + G + G V A E+F+ K + +VV+WT++I G AQNG ALELFR M + G +PN T+ ++L ++A+L G+ H A+R+ + +V VG+ALI MY++ G I ++ VFN + +K + + W S++ + HG E + +FE +++ LKPD I++ +LSAC VGL ++G YF +M Y I+P HY+CM++L GRAG L+EAY+ I+ MP EPD WG+LL+SCR+ NVDLA++AAEKLF ++P N G Y L+N +A G W + +R M+ +KK G SW+Q+ N+V+ D HPQ D I + +I KE++K G P+ D LHD+E++ +EQ+L HSEKLA+ F L+N+P L+++KNLR+C DCH+ IK+IS GREI +RD RFHHFKDG CSC D+W Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI-HHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSG--HVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760 HSP 2 Score: 193.356 bits (490), Expect = 1.164e-51 Identity = 126/469 (26.87%), Postives = 228/469 (48.61%), Query Frame = 0 Query: 28 TGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIP----QPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALF----HQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSL-KCR---DVVAWTAMIVGYAQNGLANGALELFRSMIIE-GPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMI 483 G+ IH GL F+ ++ + Y + G +A +VF+ M K + + +L AYA+ G +E R+ E+ + + VSW I+ G+N+ G AV MF ++ G P Q T + VL S + L++GR +H +++K G V +++++MY KSG +F+ + + N I+ + G +D AL +F Q + ++V+W SIIAG G D +ALE F +M + + +KP+ T+ S+L AC N+ +L G+ H + VR + + G+ALI MYAK G + +++ + + T N++ + SL++G+ G IF+SL + R D +++T+++ Q GL + + F+ M E G +P RLE S ++ + R+G +++A + ++ + D+ W +++ Sbjct: 134 VGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM-QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK--NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKP-----------------------------RLEHYS------CMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
BLAST of rna-XM_004496675.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:337965-340442 FORWARD LENGTH=825) HSP 1 Score: 512.686 bits (1319), Expect = 2.024e-170 Identity = 267/704 (37.93%), Postives = 397/704 (56.39%), Query Frame = 0 Query: 80 NTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDP-NNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 N +L +Y + ++ A +F+EIP+ DSV++ T+I GY + GL+ ++ +FL+M SG P+ FTF+ VL + +G+++H+ V GFS V N +++ Y+K L +++FD +M + D V++N +I+ Y +L F +M + F ++LS ANL SL++G+Q+H + A D GN+L+ MYAK E A IF SL R V+WTA+I GY Q GL L+LF M R + T A VL +S ASL LGKQLHA IR + +V G+ L+ MY++ GSIKDA +VF ++ R+ ++W ++I A A +G G AI F M++ L+PD ++ +GVL+AC+H G VEQG YF M +Y I P HYACM+DL GR G EA + MP EPD I W S+L++CR+HKN LA+ AAEKLF ++ ++ AY +++N +A G+W V+K M++R +KK SWV++++K+H+F D HP D I R I+++ EI++ G+ PDT SV+ D+++++K + L++HSE+LA+AFALI++P + +MKNLR C DCH+AIK IS +V REI VRD +RFHHF +G CSC DYW Sbjct: 188 NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFD-------------------------------EMPELDFVSYNVVISSYSQADQYEASLHFFREM-QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFE---------------------------------EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPD-RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825 HSP 2 Score: 211.46 bits (537), Expect = 1.605e-57 Identity = 153/563 (27.18%), Postives = 255/563 (45.29%), Query Frame = 0 Query: 30 RFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMV--SSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGF--SGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSS 588 R + ARIIK G N ++ + G + A +V++EMP K T S NT++S + K G + +AR +FD +P V+WT ++ Y + F+ A ++F +M SS P TFT +L C + +VH+F VKLGF + + V+N L+ Y + +A V+F+ + KD T +N++I GY G ++++ F M R S +P FT VL A L LG+Q+HA V + GN +LD Y K V R +FD + D V++ +I Y+Q +L FR M G ++ A +LS+ ++L+SL +G+QLH A+ S + VGN+L+ MY++ ++A +F + +R T++WT++I Q GL ++LF M NL+ D T+ VL A + GK + ++E S ++D++ + G +++A MP + + ++W +L+S+ Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVT-------------------------------FNTLITGYEKDGLYTESIHLFLKM-RQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGN---------------------------------QILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSL-PQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISA 527 HSP 3 Score: 103.99 bits (258), Expect = 1.634e-22 Identity = 83/340 (24.41%), Postives = 141/340 (41.47%), Query Frame = 0 Query: 29 GRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTD----PDIVTWNSIIAGYCHQGHDSKALETFSDM--------------------------------FRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTI 332 GR +H + + + + N+L++ Y+K F EA +F +P +TT SW T +I GY QKGL +++F +M S + Q TF VL + A+ +L +G+++H+FI++ G V + LV+MYAK G A VF+ M ++ +WN +IS H G + A+ F +M + PD V+ ++ H G + E F M +PD+ SVL+AC ++ L ++ + + AA ++ ++YA +G E R + Sbjct: 370 GRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSW-------------------------------TALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDV 678
BLAST of rna-XM_004496675.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SHZ8|PP168_ARATH (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1) HSP 1 Score: 1032.71 bits (2669), Expect = 0.000e+0 Identity = 498/786 (63.36%), Postives = 614/786 (78.12%), Query Frame = 0 Query: 1 METPKPHFHS---DAYVHLLQSAI-KSRDSFTGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 M+ P P S + +LLQ ++ KS FT + +H R+IK GL F+V+LMNNL+N YSKTG A ++F+EMPL+T FSWNTVLSAY+K G +++ FD++PQ DSVSWTT+I+GY G ++ A+++ MV GI PTQFT T VLAS AAT ++ G+KVHSFIVKLG G V V+NSL+NMYAK GD +MAK VFD M ++D S+WN MI+LHMQ G++D+A+A F QM + DIVTWNS+I+G+ +G+D +AL+ FS M R S L PD+FTL SVLSACANLE L +GKQ+H++IV DISG NALISMY++ G VE AR ++E RGT L + FT+LLDGY+K+GD++ A+ IF SLK RDVVAWTAMIVGY Q+G A+ LFRSM+ G RPNSYTLAA+LSV SSLASL GKQ+H +A++ E+ SVSV NALITMY+++G+I A + F+ I +RDT++WTSMIIALAQHG EA+ELFE ML L+PDHITYVGV SACTH GLV QG+ YF++MK+V I PT SHYACM+DLFGRAGLL+EA FI MPIEPDV+ WGSLLS+CRVHKN+DL KVAAE+L L++P NSGAYSALAN SACGKW +AAK+RK MKD VKKEQG SW+++ +KVH+FGVED HP+++ IY + KIW EIKKMG+ PDT SVLHDLE+EVKEQILRHHSEKLAIAF LI++P TLRIMKNLRVCNDCH+AIK+IS LVGREIIVRD TRFHHFKDG CSC+DYW Sbjct: 1 MDAPVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
BLAST of rna-XM_004496675.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FRI5|PPR57_ARATH (Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H74 PE=2 SV=1) HSP 1 Score: 575.089 bits (1481), Expect = 0.000e+0 Identity = 297/762 (38.98%), Postives = 467/762 (61.29%), Query Frame = 0 Query: 30 RFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIP--QPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIG-RKVHSFIVKLGFSGVVPVANSLVNMYAK--SGDSLM--AKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDP-DIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEV-KEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 R +H II G ++N L++ Y K+ A ++F+E+ + T++S Y G I AR +F++ P D+V + +I G++ +A+ +F +M G P FTF VLA A + + H+ +K G + V+N+LV++Y+K S SL+ A+ VFD + KD+ +W M++ +++ G D+ L M D +V +N++I+GY ++G +ALE M SS ++ D+FT SV+ ACA L+LGKQVHAY++R + D S N+L+S+Y K G + AR I E + +++++ +LL GYV G + A+ IF +K +++++W MI G A+NG L+LF M EG P Y + + + L + G+Q HA +++ SS+S GNALITMY++ G +++AR+VF + D+++W ++I AL QHG G EA++++E+MLK ++PD IT + VL+AC+H GLV+QG+ YF+ M+ VY I P A HYA +IDL R+G +A + I S+P +P W +LLS CRVH N++L +AA+KLF + P + G Y L+N +A G+W + A+VRKLM+DR VKKE SW+++ +VH F V+D HP+ +A+Y + + KE++++G+ PDT VLHD+E + KE +L HSEK+A+AF L+ P T+RI KNLR C DCH+ +++S +V R+II+RD RFHHF++G CSC ++W Sbjct: 34 RAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMV-SSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFE--KMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790 HSP 2 Score: 64.6994 bits (156), Expect = 2.605e-9 Identity = 48/193 (24.87%), Postives = 84/193 (43.52%), Query Frame = 0 Query: 28 TGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVAN---SLVNMYAKSGDSLMAKVVFDSMRLKDKST-WNIMIS 216 G+ HA+++K G ++ N L+ Y+K G EA +VF MP + SWN +++A + GH A +++E M+ GI P + T VL +C+ G +D GRK + + + P A+ L+++ +SG A+ V +S+ K + W ++S Sbjct: 435 NGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEE-------------------------------MLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETV--YRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLS 594
BLAST of rna-XM_004496675.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9CAA8|PP108_ARATH (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H22 PE=3 SV=1) HSP 1 Score: 574.704 bits (1480), Expect = 0.000e+0 Identity = 296/754 (39.26%), Postives = 445/754 (59.02%), Query Frame = 0 Query: 30 RFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSS-GISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 + IH II+ + FL NN+++ Y+ S T A RVF+ +P FSWN +L AY+K G I F+++P D V+W +I GY+ GL AV+ + M+ + T+ T +L ++ G + +G+++H ++KLGF + V + L+ MYA G AK VF + ++ +N ++ + CG ++ AL LF M + D V+W ++I G G +A+E F +M + LK D++ GSVL AC L ++ GKQ+HA I+R + G+ALI MY K + A+T +FD +K ++VV+WTAM+VGY Q G A A+++F M G P+ YTL +S ++++SL+ G Q H AI + V+V N+L+T+Y + G I D+ ++FN+++ RD ++WT+M+ A AQ G E I+LF+ M++ LKPD +T GV+SAC+ GLVE+G+ YF LM + Y I P+ HY+CMIDLF R+G LEEA FI MP PD I W +LLS+CR N+++ K AAE L +DP++ Y+ L++ ++ GKW A++R+ M+++ VKKE G SW++ K+H F +D P D IY + ++ +I G+ PDT V HD+E+ VK ++L +HSE+LAIAF LI P +R+ KNLRVC DCH+A K+IS + GREI+VRDA RFH FKDG+CSC D+W Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREM-KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKT---------------------------------VFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV-RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743 HSP 2 Score: 202.986 bits (515), Expect = 4.867e-54 Identity = 126/463 (27.21%), Postives = 217/463 (46.87%), Query Frame = 0 Query: 29 GRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQ-LHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHG 490 G+ IH ++IK G + + + LL Y+ G ++A +VF + + T +N+++ G IE A ++F + + DSVSW +I G Q GL A++ F M G+ Q+ F VL +C G ++ G+++H+ I++ F + V ++L++MY K AK VFD M+ K+ +W M+ + Q GR + +A++ F DM R S + PD +TLG +SACAN+ SL+ G Q H + + + N+L+++Y K GD+ + +F+ + RD V+WTAM+ YAQ G A ++LF M+ G +P+ TL V+S S ++ G++ V S+ + +I ++SRSG +++A + N + D + WT+++ A G Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAE-------------------------------EAVKIFLDMQR-SGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC---------------------------------GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554 HSP 3 Score: 109.383 bits (272), Expect = 2.751e-23 Identity = 90/345 (26.09%), Postives = 144/345 (41.74%), Query Frame = 0 Query: 29 GRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTD----PDIVTWNSIIAGYCHQGHDSKALETFS-------------------DMF-RSSSLK------------PDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALI-SMYAKSGAVEIARTIVELR 336 G+ IHA II+ +++ + L++ Y K A VF+ M K SW ++ Y + G E AV++FL M SGI P +T + +++CA +L+ G + H + G V V+NSLV +Y K GD + +F+ M ++D +W M+S + Q GR + LF +M PD VT +I+ G K F D+F RS L+ PD ++LSAC N +L++GK ++ ++D AG L+ S+YA G + ++ +LR Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAE-------------------------------EAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLI--ELDPHHPAGYTLLSSIYASKGKWD---SVAQLR 597
BLAST of rna-XM_004496675.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LFL5|PP390_ARATH (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1) HSP 1 Score: 550.436 bits (1417), Expect = 0.000e+0 Identity = 288/720 (40.00%), Postives = 426/720 (59.17%), Query Frame = 0 Query: 73 LKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSS-GISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDP----DIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSL--KCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEG--PRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVS-SVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 + F N +++ Y++ + AR++FDE+ D VSW +II Y + G A++MF RM + G P T VL CA+ GT +G+++H F V + V N LV+MYAK G A VF +M +KD +WN M++ + Q GR + A+ LF +M + D+VTW++ I+GY +G +AL M SS +KP++ TL SVLS CA++ +L GK++H Y ++ ID+ G N++ L+D Y K V AR +FDSL K RDVV WT MI GY+Q+G AN ALEL M E RPN++T++ L +SLA+L +GKQ+HA A+R ++ + + V N LI MY++ GSI DAR VF+ + +K + +TWTS++ HG G EA+ +F++M + K D +T + VL AC+H G+++QG YFN MK V+ + P HYAC++DL GRAG L A I MP+EP + W + LS CR+H V+L + AAEK+ + N+ G+Y+ L+N + G+W D ++R LM+ + VKK G SWV+ F V D HP IY+++ + IK +G+ P+T LHD++ E K+ +L HSEKLA+A+ ++ +P A +RI KNLRVC DCH+A Y+S ++ +II+RD++RFHHFK+GSCSC+ YW Sbjct: 159 ISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML-SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDL-------------------------RKNGHGDENMV-INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNE-VTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850 HSP 2 Score: 224.557 bits (571), Expect = 5.117e-61 Identity = 155/528 (29.36%), Postives = 255/528 (48.30%), Query Frame = 0 Query: 82 VLSAYAKGGHIETARRMFDEIPQPDS--VSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCR----DVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLE-------EVSSVSVGNALITMYSRSGSIKDARKVFNQISSK-RDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNL--KPDHITYVGVLSACTHVGLVEQGK-CYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVH 592 ++S Y G + A + P D+ W ++I Y G N + +F M S +P +TF V +C ++ G H+ + GF V V N+LV MY++ A+ VFD M + D +WN +I + + G+ VAL +F +MT+ +PD TL +VL CA+L + LGKQ+H + V +++ + GN L+ MYAK G ++ A T+ S +V+++ +++ GY +IG A +F+ ++ DVV W+A I GYAQ GL AL + R M+ G +PN TL +VLS +S+ +L GK++H AI+ V N LI MY++ + AR +F+ +S K RD +TWT MI +QHG N+A+EL +M + + +P+ T L AC + + GK + ++N + P C+ID++ + G + +A +M + + + W SL++ +H Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTN-------------------------------EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTV--FSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMH 557 HSP 3 Score: 194.897 bits (494), Expect = 8.272e-51 Identity = 136/495 (27.47%), Postives = 228/495 (46.06%), Query Frame = 0 Query: 29 GRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQP----DSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKL-------GFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKS--TWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADID-ISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGN----ALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHG---LGNEAIELFEDM 502 G+ +H + + +F+ N L++ Y+K G EA+ VF+ M +K SWN +++ Y++ G E A R+F+++ + D V+W+ I GY Q+GL A+ + +M+SSGI P + T VL+ CA+ G L G+++H + +K G V N L++MYAK A+ +FDS+ K++ TW +MI + Q G + AL L +M + D T +P+ FT+ L ACA+L +L++GKQ+HAY +R + + N LI MYAK G++ AR +FD++ ++ V WT+++ GY +G AL +F M G + + TL VL S +D G + R++ V VS G L+ + R+G + A ++ ++ + + W + + HG LG A E ++ Sbjct: 248 GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQT------------------------------RPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARL---------------------------------VFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFN---RMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITEL 676
BLAST of rna-XM_004496675.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SY02|PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1) HSP 1 Score: 548.895 bits (1413), Expect = 0.000e+0 Identity = 273/756 (36.11%), Postives = 434/756 (57.41%), Query Frame = 0 Query: 28 TGRFIHA-RIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 TGR A R+ K ++ N +++ Y + G F A ++F+EMP + SWN ++ Y + ++ AR +F+ +P+ D SW T++ GY Q G + A +F RM ++ +L++ ++ + K + + N L+ + K + A+ FDSM ++D +WN +I+ + Q G++D A LF + D+ TW ++++GY +A E F M P++ + + NA+++ Y + +E+A+ + ++ NV + +++ GY + G +S A+ +FD + RD V+W AMI GY+Q+G + AL LF M EG R N + ++ LS + + +L+LGKQLH ++ + VGNAL+ MY + GSI++A +F +++ K D ++W +MI ++HG G A+ FE M + LKPD T V VLSAC+H GLV++G+ YF M Y + P + HYACM+DL GRAGLLE+A+N +++MP EPD WG+LL + RVH N +LA+ AA+K+F ++P NSG Y L+N ++ G+W D K+R M+D+ VKK G SW++I NK H F V D HP++D I+ + ++ +KK G+ T VLHD+E+E KE+++R+HSE+LA+A+ ++ +R++KNLRVC DCH+AIKY++ + GR II+RD RFHHFKDGSCSC DYW Sbjct: 77 TGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEA----CMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM-------PER---------------------------------NEVSWNAMLAGYVQGERMEMAKELFDV--MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
BLAST of rna-XM_004496675.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LW63|PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1) HSP 1 Score: 528.094 bits (1359), Expect = 6.108e-177 Identity = 272/710 (38.31%), Postives = 407/710 (57.32%), Query Frame = 0 Query: 78 SWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAK---SGDSLMAKVVFDSM--RLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 S + V+S Y + A +F + P ++W ++I + + LF+ A+ F+ M +SG P F VL SC L G VH FIV+LG + N+L+NMYAK G + VFD M R + ++ + +D +F M D+V++N+IIAGY G AL +M ++ LKPD FTL SVL + + GK++H Y++R ID G++L+ MYAKS +E + +F L CRD ++W +++ GY QNG N AL LFR M+ +P + ++V+ + LA+L LGKQLH +R S++ + +AL+ MYS+ G+IK ARK+F++++ D ++WT++I+ A HG G+EA+ LFE+M + +KP+ + +V VL+AC+HVGLV++ YFN M VY + HYA + DL GRAG LEEAYNFI M +EP W +LLSSC VHKN++LA+ AEK+F +D N GAY + N ++ G+W + AK+R M+ + ++K+ SW+++ NK H F D HP D I + + ++++K G+ DT VLHD+++E K ++L HSE+LA+AF +IN+ T+R+ KN+R+C DCH AIK+IS + REIIVRD +RFHHF G+CSC DYW Sbjct: 41 SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM-GTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIE---------------------------------DSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715 HSP 2 Score: 189.119 bits (479), Expect = 2.339e-49 Identity = 127/491 (25.87%), Postives = 232/491 (47.25%), Query Frame = 0 Query: 11 DAYVHLLQSAIKSRDSFTGRFIHARIIKHGLHFTVFLMNNLLNFYSK---TGSFTEAHRVFNEMPLKTTFSWNTVLSAYA--KGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLG-------KQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQH 489 + + +L+S D G +H I++ G+ ++ N L+N Y+K GS VF+EMP +T+ S + + A I++ RR+F+ +P+ D VS+ TII GY Q G++ A++M M ++ + P FT + VL + + G+++H ++++ G V + +SLV+MYAKS ++ VF + +D +WN +++ ++Q GR + AL LF QM ++ +KP SV+ ACA+L +L LGKQ+H Y++R + +AL+ MY+K G ++ AR+IFD + D V+WTA+I+G+A +G + A+ LF M +G +PN AVL+ S + +D +++ LE ++V+ + R+G +++A +++ + W++++ + + H Sbjct: 106 NVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMV--------------------------------TAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCG---------------------------------NIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA------DLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525 HSP 3 Score: 117.857 bits (294), Expect = 5.183e-26 Identity = 77/338 (22.78%), Postives = 164/338 (48.52%), Query Frame = 0 Query: 25 DSFTGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQM----TDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVE-LRGTSSLNVIAFTSLLDGYVKIG 357 D G+ IH +I+ G+ V++ ++L++ Y+K+ ++ RVF+ + + SWN++++ Y + G YN+ A+++F +MV++ + P F+ V+ +CA TL +G+++H ++++ GF + +A++LV+MY+K G+ A+ +FD M + D+ +W +I H G A++LF +M P+ V + +++ H G +A F+ M + L + +V L ++ + +I + ++ +G+ + L+S + +E+A + E + S N+ A+ + + Y G Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGR-------------------------YNE------ALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKL---EEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNG 560
BLAST of rna-XM_004496675.3 vs. UniProtKB/Swiss-Prot
Match: sp|O82380|PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1) HSP 1 Score: 514.612 bits (1324), Expect = 2.028e-171 Identity = 262/703 (37.27%), Postives = 412/703 (58.61%), Query Frame = 0 Query: 83 LSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVS-SGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIE-GPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDL-EQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 ++A + +E AR++FDEIP+P+S +W T+I Y ++ FL MVS S P ++TF ++ + A +L +G+ +H VK V VANSL++ Y CG LD A +F + + D+V+WNS+I G+ +G KALE F M S +K T+ VLSACA + +L+ G+QV +YI ++++ NA++ MY K G++E A+ + + + + +T++LDGY D ARE+ +S+ +D+VAW A+I Y QNG N AL +F + ++ + N TL + LS + + +L+LG+ +H+ + + V +ALI MYS+ G ++ +R+VFN + KRD W++MI LA HG GNEA+++F M + N+KP+ +T+ V AC+H GLV++ + F+ M++ Y I P HYAC++D+ GR+G LE+A FI +MPI P WG+LL +C++H N++LA++A +L ++P N GA+ L+N + GKW + +++RK M+ +KKE G S ++I +H F D HP + +Y + ++ +++K G+ P+ VL + E+E+KEQ L HSEKLAI + LI++ +R++KNLRVC DCHS K IS L REIIVRD RFHHF++G CSC D+W Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCY-------------------------------FSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM-ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFD--AMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738 HSP 2 Score: 194.126 bits (492), Expect = 5.640e-51 Identity = 120/415 (28.92%), Postives = 204/415 (49.16%), Query Frame = 0 Query: 77 FSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQL-HATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHG 490 F N+++ Y G +++A ++F I + D VSW ++I G+ QKG + A+++F +M S + + T VL++CA L+ GR+V S+I + + + +AN++++MY K G AK +FD+M KD TW M+ + + A + + M DIV WN++I+ Y G ++AL F ++ ++K ++ TL S LSACA + +L+LG+ +H+YI + I ++ +ALI MY+K GD+ +RE+F+S++ RDV W+AMI G A +G N A+++F M +PN T V S +D + L H V ++ + RSG ++ A K + T W +++ A H Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK---------------------------------CGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHA 548 HSP 3 Score: 137.502 bits (345), Expect = 3.228e-32 Identity = 80/267 (29.96%), Postives = 140/267 (52.43%), Query Frame = 0 Query: 14 VHLLQSAIKSRDSFTGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRM-VSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTD----PDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDK 275 V +L + K R+ GR + + I ++ ++ + L N +L+ Y+K GS +A R+F+ M K +W T+L YA E AR + + +PQ D V+W +I Y Q G N A+ +F + + + Q T L++CA G L++GR +HS+I K G V ++L++MY+K GD ++ VF+S+ +D W+ MI G + A+ +F++M + P+ VT+ ++ H G +A F M + + P++ Sbjct: 236 VGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEE 502
BLAST of rna-XM_004496675.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LNU6|PPR53_ARATH (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H21 PE=2 SV=2) HSP 1 Score: 510.375 bits (1313), Expect = 1.775e-169 Identity = 261/730 (35.75%), Postives = 413/730 (56.58%), Query Frame = 0 Query: 62 TEAH-RVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMT----DPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCR----DVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 T+AH R+ + ++++Y+ A + IP P S++++I + LF ++ +F RM S G+ P + CA +G+++H G V S+ +MY + G A+ VFD M KD T + ++ + + G L+ + + +M + +IV+WN I++G+ G+ +A+ F + PD+ T+ SVL + + E L +G+ +H Y+++ + +A+I MY KSG + I + + + G + G V A E+F+ K + +VV+WT++I G AQNG ALELFR M + G +PN T+ ++L ++A+L G+ H A+R+ + +V VG+ALI MY++ G I ++ VFN + +K + + W S++ + HG E + +FE +++ LKPD I++ +LSAC VGL ++G YF +M Y I+P HY+CM++L GRAG L+EAY+ I+ MP EPD WG+LL+SCR+ NVDLA++AAEKLF ++P N G Y L+N +A G W + +R M+ +KK G SW+Q+ N+V+ D HPQ D I + +I KE++K G P+ D LHD+E++ +EQ+L HSEKLA+ F L+N+P L+++KNLR+C DCH+ IK+IS GREI +RD RFHHFKDG CSC D+W Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI-HHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSG--HVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760 HSP 2 Score: 193.356 bits (490), Expect = 1.137e-50 Identity = 126/469 (26.87%), Postives = 228/469 (48.61%), Query Frame = 0 Query: 28 TGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIP----QPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALF----HQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSL-KCR---DVVAWTAMIVGYAQNGLANGALELFRSMIIE-GPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMI 483 G+ IH GL F+ ++ + Y + G +A +VF+ M K + + +L AYA+ G +E R+ E+ + + VSW I+ G+N+ G AV MF ++ G P Q T + VL S + L++GR +H +++K G V +++++MY KSG +F+ + + N I+ + G +D AL +F Q + ++V+W SIIAG G D +ALE F +M + + +KP+ T+ S+L AC N+ +L G+ H + VR + + G+ALI MYAK G + +++ + + T N++ + SL++G+ G IF+SL + R D +++T+++ Q GL + + F+ M E G +P RLE S ++ + R+G +++A + ++ + D+ W +++ Sbjct: 134 VGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM-QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK--NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKP-----------------------------RLEHYS------CMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
BLAST of rna-XM_004496675.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9S7F4|PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H36 PE=3 SV=1) HSP 1 Score: 512.686 bits (1319), Expect = 1.938e-169 Identity = 267/704 (37.93%), Postives = 397/704 (56.39%), Query Frame = 0 Query: 80 NTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDP-NNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 N +L +Y + ++ A +F+EIP+ DSV++ T+I GY + GL+ ++ +FL+M SG P+ FTF+ VL + +G+++H+ V GFS V N +++ Y+K L +++FD +M + D V++N +I+ Y +L F +M + F ++LS ANL SL++G+Q+H + A D GN+L+ MYAK E A IF SL R V+WTA+I GY Q GL L+LF M R + T A VL +S ASL LGKQLHA IR + +V G+ L+ MY++ GSIKDA +VF ++ R+ ++W ++I A A +G G AI F M++ L+PD ++ +GVL+AC+H G VEQG YF M +Y I P HYACM+DL GR G EA + MP EPD I W S+L++CR+HKN LA+ AAEKLF ++ ++ AY +++N +A G+W V+K M++R +KK SWV++++K+H+F D HP D I R I+++ EI++ G+ PDT SV+ D+++++K + L++HSE+LA+AFALI++P + +MKNLR C DCH+AIK IS +V REI VRD +RFHHF +G CSC DYW Sbjct: 188 NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFD-------------------------------EMPELDFVSYNVVISSYSQADQYEASLHFFREM-QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFE---------------------------------EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPD-RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825 HSP 2 Score: 211.46 bits (537), Expect = 1.566e-56 Identity = 153/563 (27.18%), Postives = 255/563 (45.29%), Query Frame = 0 Query: 30 RFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMV--SSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGF--SGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSS 588 R + ARIIK G N ++ + G + A +V++EMP K T S NT++S + K G + +AR +FD +P V+WT ++ Y + F+ A ++F +M SS P TFT +L C + +VH+F VKLGF + + V+N L+ Y + +A V+F+ + KD T +N++I GY G ++++ F M R S +P FT VL A L LG+Q+HA V + GN +LD Y K V R +FD + D V++ +I Y+Q +L FR M G ++ A +LS+ ++L+SL +G+QLH A+ S + VGN+L+ MY++ ++A +F + +R T++WT++I Q GL ++LF M NL+ D T+ VL A + GK + ++E S ++D++ + G +++A MP + + ++W +L+S+ Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVT-------------------------------FNTLITGYEKDGLYTESIHLFLKM-RQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGN---------------------------------QILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSL-PQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISA 527 HSP 3 Score: 67.781 bits (164), Expect = 2.636e-10 Identity = 41/119 (34.45%), Postives = 62/119 (52.10%), Query Frame = 0 Query: 29 GRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETA----RRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVS-SGISPTQ 142 G+ +HA II+ G VF + L++ Y+K GS +A +VF EMP + SWN ++SA+A G E A +M + QPDSVS ++ + G + F M GI+P + Sbjct: 471 GKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKK 589 HSP 4 Score: 63.5438 bits (153), Expect = 5.549e-9 Identity = 43/175 (24.57%), Postives = 76/175 (43.43%), Query Frame = 0 Query: 73 LKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMT-DPDIVTWNSII 246 L+ FS + ++ YAK G I+ A ++F+E+P ++VSW +I + G A+ F +M+ SG+ P + VL +C+ G ++ G + F G+ P K + M+ L + GR A L +M +PD + W+S++ Sbjct: 484 LENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEY--FQAMSPIYGITP----------------------------KKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
BLAST of rna-XM_004496675.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M2Y7|PP274_ARATH (Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H79 PE=2 SV=1) HSP 1 Score: 503.827 bits (1296), Expect = 1.988e-167 Identity = 286/773 (37.00%), Postives = 429/773 (55.50%), Query Frame = 0 Query: 16 LLQSAIKSRDSFTGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTD-PDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNG-LANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSS-VSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTD-SVLHDLEQEVKEQILR--HHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 LL ++ RD FTG+ +HA +K + + +L N+ +N YSK G + A F FS+N ++ AYAK I AR++FDEIPQPD+VS+ T+I GY A+ +F RM G FT + ++A+C +D+ +++H F V GF V N+ V Y+K G L A+++F+ M + D V+WNS+I Y +KAL + +M K D FTL SVL+A +L+ L G+Q H +++A + G+ LI Y+K G DG + + ++F + D+V W MI GY+ N L+ A++ FR M G RP+ + V S S+L+S KQ+H AI+ S+ +SV NALI++Y +SG+++DAR VF+++ + + +++ MI AQHG G EA+ L++ ML + P+ IT+V VLSAC H G V++G+ YFN MK + IEP A HY+CMIDL GRAG LEEA FI +MP +P +AW +LL +CR HKN+ LA+ AA +L ++ P + Y LAN + KW + A VRK M+ + ++K+ G SW+++ K H+F ED HP + + ++ K++KK+G+ D +++ + E ++ +R HHSEKLA+AF L+++ L ++KNLR+C DCH+AIK++S + GREIIVRD RFH FKDG CSC DYW Sbjct: 14 LLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGG-------------------------------LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMI-FKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGC------------------------DG------MYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721 HSP 2 Score: 171.014 bits (432), Expect = 3.599e-43 Identity = 136/515 (26.41%), Postives = 240/515 (46.60%), Query Frame = 0 Query: 139 SPTQF-TFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDM-----FRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSG---SIKDARKVFNQISSKRDTLTWTSMIIALA-QHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLF--LIDPNNSGAYSALANTLSACGKWADAAKVRKLMKD 641 +P +F TF +L A L G+ +H+ VK + ++N VN+Y+K G A+ F S + ++N+++ + + ++ +A LF ++ PD V++N++I+GY + A ETF+ M R + D FTL +++AC + + L KQ+H + V D + NA ++ Y+K G + A ++ G L RD V+W +MIV Y Q+ AL L++ MI +G + + +TLA+VL+ +SL L G+Q H I+ + VG+ LI YS+ G + D+ KVF +I S D + W +MI + L EA++ F M + +PD ++V V SAC+++ Q K L + S +I L+ ++G L++A MP E + +++ ++ H + A + +++ I PN + A+ + + CGK + + MK+ Sbjct: 4 TPWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGY------ADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV--FYGMDEL------------------------------RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP-DLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKI-TFVAVLSACAHCGKVDEGQEYFNTMKE 475
BLAST of rna-XM_004496675.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y0A8|A0A1S2Y0A8_CICAR (Pentatricopeptide repeat-containing protein At2g22070 OS=Cicer arietinum OX=3827 GN=LOC101492081 PE=3 SV=1) HSP 1 Score: 1625.91 bits (4209), Expect = 0.000e+0 Identity = 782/782 (100.00%), Postives = 782/782 (100.00%), Query Frame = 0 Query: 1 METPKPHFHSDAYVHLLQSAIKSRDSFTGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 METPKPHFHSDAYVHLLQSAIKSRDSFTGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW Sbjct: 1 METPKPHFHSDAYVHLLQSAIKSRDSFTGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782
BLAST of rna-XM_004496675.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D5AAP2|A0A9D5AAP2_PEA (Pentatricopeptide repeat-containing protein OS=Pisum sativum OX=3888 GN=KIW84_065628 PE=3 SV=1) HSP 1 Score: 1451.42 bits (3756), Expect = 0.000e+0 Identity = 692/782 (88.49%), Postives = 734/782 (93.86%), Query Frame = 0 Query: 1 METPKPHFHSDAYVHLLQSAIKSRDSFTGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 ME PKPH SDAYV+LLQSAIKSRDS TG+FIHARIIKHGLH + FLMNNLLNFYSKT SFT+AHR+F EMPL+TTFSWNT+L++Y KGG+IETARR+FDEIPQPDSVSW ++I+GYNQ GLF T++ FL+M+SSG+SP QFTFT VLASC ATGTLDIG+KVHSFIVKLG +GVVPVANSL+NMYAKSGDSLMA VVFD MRL+DKSTWNIMIS+HM GRLD ALALF QMTD DIV+WNSIIAGYCHQG DSKALETFS+MFRSSSLKPDKFTLGSVLSACANLESLKLGKQ+HA+IVRADIDISGA GNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLL+GYVKIGDV+PAREIFDSLKCRDV+AWTAMIVGYAQNGL N ALELFR MI +G RPNSYTLAAVLSVFSSLASLD GKQLHATAIRLEEVSSVSVGNALITMYSRSG IKDARKVFNQI ++RDTLTWTSMIIALAQHG+GNEAIELFE+MLK NLKPDHITYVGVLSACTHVGLVEQGK YFNLMKNV+HIEPT SHYACMIDLFGRAGL+E+AYNFI+SMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKL LIDPNNSGAYSALANTLSACGKW DAAK+RKLMK R VKKEQG SWVQI NKVHIFGVEDALHPQRDAIYRM+SKIWKEIKKMGFTPDTDSVLHDLE EVKEQILRHHSEKLAIAFALINSPGY TLRIMKNLRVCNDCHSAIKYIS LVGREIIVRD TRFHHFKDGSCSCQDYW Sbjct: 1 MEIPKPHSQSDAYVYLLQSAIKSRDSSTGKFIHARIIKHGLHLSAFLMNNLLNFYSKTSSFTDAHRLFAEMPLRTTFSWNTLLASYVKGGNIETARRLFDEIPQPDSVSWNSMIVGYNQTGLFYTSIYTFLKMISSGVSPNQFTFTNVLASCVATGTLDIGKKVHSFIVKLGLTGVVPVANSLLNMYAKSGDSLMANVVFDRMRLRDKSTWNIMISMHMHFGRLDSALALFDQMTDRDIVSWNSIIAGYCHQGCDSKALETFSNMFRSSSLKPDKFTLGSVLSACANLESLKLGKQIHAFIVRADIDISGALGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLNGYVKIGDVNPAREIFDSLKCRDVIAWTAMIVGYAQNGLLNDALELFRLMITDGTRPNSYTLAAVLSVFSSLASLDHGKQLHATAIRLEEVSSVSVGNALITMYSRSGCIKDARKVFNQICTERDTLTWTSMIIALAQHGVGNEAIELFEEMLKSNLKPDHITYVGVLSACTHVGLVEQGKRYFNLMKNVHHIEPTPSHYACMIDLFGRAGLMEDAYNFIKSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLLLIDPNNSGAYSALANTLSACGKWEDAAKIRKLMKAREVKKEQGFSWVQIQNKVHIFGVEDALHPQRDAIYRMMSKIWKEIKKMGFTPDTDSVLHDLEPEVKEQILRHHSEKLAIAFALINSPGYTTLRIMKNLRVCNDCHSAIKYISRLVGREIIVRDVTRFHHFKDGSCSCQDYW 782
BLAST of rna-XM_004496675.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NFW3|A0A2K3NFW3_TRIPR (Pentatricopeptide repeat-containing protein at2g22070-like protein OS=Trifolium pratense OX=57577 GN=L195_g025212 PE=3 SV=1) HSP 1 Score: 1439.48 bits (3725), Expect = 0.000e+0 Identity = 683/782 (87.34%), Postives = 733/782 (93.73%), Query Frame = 0 Query: 1 METPKPHFHSDAYVHLLQSAIKSRDSFTGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 METPKPHFHSD YV+LLQSAIKSRDSFTGRFIHARIIKHGLH +V+LMNNLLN+YSKT SFT+AHR+F E+P + TFSWNT+LS+Y KGG+IETARR+FDEIPQPDSVSWTT+I+GYNQ GLFNTA+ F +M+S GI PTQ+TFT VL SC ATG LDIG+KVHSFIVKLG SGVVPVANSL+NMYAKSGDSLMAKVVFD MRL+DKST NIMIS+HMQ GRL+VAL+LF QM D DIV+WNSII+GYCHQGHD KALETFSDMFRSSSLKPD+FTLGSVLSACANLESLKLGK++HAYIVR++IDISGA GNALISMYAKS AVEIARTIVEL+GTSSLNVIAFTSLL+GY KIGDV+PAREIFDSLKCRDVVAWTAMIVGYAQNGL N AL+LFR MI EGPRPN+YTLAAVLSVFSS ASLD GKQLHATAIRLEEVSSVSVGNALITMYSRSG IKDARKVFNQI ++RDT TWTSMIIALAQHGLGNEA ELFE+MLKFN+KPDHITYVGVLSACTHVGLVEQGK YFNLMKNV+HIEPT SHYAC+IDLFGRAGL+EEA NFI+SMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEK+ LIDPNNSGAYSALANT SACGKW DAAK+R+LMKDR VKKEQG SWVQI NKVHIFGVEDALHPQRDAIY+M+SKIWKEIKKMGFTPDTD VLHDLEQEVKE+ILRHHSEKLAIAFALINSPGY TLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW Sbjct: 9 METPKPHFHSDTYVYLLQSAIKSRDSFTGRFIHARIIKHGLHLSVYLMNNLLNYYSKTTSFTDAHRLFAEIPDRNTFSWNTLLSSYTKGGNIETARRLFDEIPQPDSVSWTTMIVGYNQMGLFNTAIHTFQKMISFGILPTQYTFTNVLGSCVATGNLDIGKKVHSFIVKLGLSGVVPVANSLLNMYAKSGDSLMAKVVFDRMRLRDKSTLNIMISMHMQFGRLEVALSLFDQMIDRDIVSWNSIISGYCHQGHDIKALETFSDMFRSSSLKPDRFTLGSVLSACANLESLKLGKEIHAYIVRSNIDISGALGNALISMYAKSSAVEIARTIVELKGTSSLNVIAFTSLLNGYAKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQNGLLNDALDLFRLMITEGPRPNNYTLAAVLSVFSSFASLDHGKQLHATAIRLEEVSSVSVGNALITMYSRSGCIKDARKVFNQICTERDTSTWTSMIIALAQHGLGNEATELFEEMLKFNIKPDHITYVGVLSACTHVGLVEQGKRYFNLMKNVHHIEPTPSHYACIIDLFGRAGLIEEACNFIKSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKVLLIDPNNSGAYSALANTYSACGKWDDAAKIRRLMKDREVKKEQGFSWVQIQNKVHIFGVEDALHPQRDAIYQMMSKIWKEIKKMGFTPDTDCVLHDLEQEVKEKILRHHSEKLAIAFALINSPGYTTLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 790
BLAST of rna-XM_004496675.3 vs. UniProtKB/TrEMBL
Match: tr|A0A072VR62|A0A072VR62_MEDTR (Pentatricopeptide (PPR) repeat protein OS=Medicago truncatula OX=3880 GN=25485217 PE=3 SV=1) HSP 1 Score: 1429.85 bits (3700), Expect = 0.000e+0 Identity = 680/782 (86.96%), Postives = 730/782 (93.35%), Query Frame = 0 Query: 1 METPKPHFHSDAYVHLLQSAIKSRDSFTGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 METPK SD +V+LLQSAIKSRD+ TGRFIHARIIKHGLH +VFLMNNLLNFYSKT SF +AHR+F+EMP +TTFSWNT+LS+YAKGG+IETARR+FD+IP+PDSVSWTT+I+GYNQ G FNTA+ F +M+S GI PTQFTFT VLASC ATG+LDIG+KVHSF+VKLG SGVVPVANSL+NMY KSGDSL K VFD MRL+DKSTWNIMIS+HMQ GR DVALALF QMTD DI++WNSIIAGYCHQG+DSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQ+HAYIVRADIDISGA GNALISMYAKSGAVE+ARTIVELRGTS++NVIAFTSLL+GYVKIGDV+PAREIFDSLKCRDVVAWTAMIVGYAQN L ALELFR MI EGPRPNSYTLAAVLSVFSSLASLD GKQLHA AIRL+EVSSVSVGNALITMYS+SG IKDARKVFNQI ++RDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGK YFNLMKNV+HIEPT SHYACMIDLFGRAGL+EEAYNFI++MPIEPD IAWGSLLS+CRVHKNVDLAKVAAEKL LIDPNNSGAYSALANT SACG+W +AAKVRKLM+DR VKKEQG SWVQI NKVHIFGVEDALHPQRDAIYRMISKIWKEIKK+GF PDTDSVLHDL+QEVKEQIL HHSEKLAIAFALINSPGY TLRIMKNLRVCNDCHSAIKYIS+LVGREIIVRDATRFHHFKDGSCSC+DYW Sbjct: 5 METPK----SDTFVYLLQSAIKSRDTVTGRFIHARIIKHGLHLSVFLMNNLLNFYSKTASFNDAHRLFSEMPQRTTFSWNTLLSSYAKGGNIETARRLFDDIPEPDSVSWTTMIVGYNQMGRFNTAIHTFQQMISDGILPTQFTFTNVLASCVATGSLDIGKKVHSFVVKLGLSGVVPVANSLLNMYVKSGDSLRVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVALALFDQMTDRDIISWNSIIAGYCHQGYDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQIHAYIVRADIDISGAVGNALISMYAKSGAVEVARTIVELRGTSNINVIAFTSLLNGYVKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQNSLLKDALELFRLMISEGPRPNSYTLAAVLSVFSSLASLDHGKQLHAIAIRLKEVSSVSVGNALITMYSKSGCIKDARKVFNQICTERDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKRYFNLMKNVHHIEPTHSHYACMIDLFGRAGLIEEAYNFIKTMPIEPDGIAWGSLLSACRVHKNVDLAKVAAEKLLLIDPNNSGAYSALANTHSACGEWEEAAKVRKLMRDREVKKEQGFSWVQIQNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKIGFNPDTDSVLHDLDQEVKEQILSHHSEKLAIAFALINSPGYTTLRIMKNLRVCNDCHSAIKYISMLVGREIIVRDATRFHHFKDGSCSCRDYW 782
BLAST of rna-XM_004496675.3 vs. UniProtKB/TrEMBL
Match: tr|A0A371HYB8|A0A371HYB8_MUCPR (Pentatricopeptide repeat-containing protein (Fragment) OS=Mucuna pruriens OX=157652 GN=PCMP-H41 PE=3 SV=1) HSP 1 Score: 1395.56 bits (3611), Expect = 0.000e+0 Identity = 662/782 (84.65%), Postives = 723/782 (92.46%), Query Frame = 0 Query: 1 METPKPHFHSDAYVHLLQSAIKSRDSFTGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 M+TP PH +SD V+LLQSAIKSRD FTGR IHAR+IKHGL VFL NNLLNFY+KT SF++AHR+F+EMPLKTTFSWNT+LSAYAKGG++++AR++FD+IPQPDSVSWTT+I+GYN GLFN+A+ FL M+SSGISPTQFTFT VLASCAA LD+GRK+HSF VKLG SG+VPVANSL+NMYAK GDS+M KVVFD MRLKDKSTWN MIS+HMQ GRLD+ALALF QM+DPDIV+WNSII GYCHQG+D KALETFS M SSSLKPDKFTL SVLSACANLESLKLGKQ+HA+IVRAD+DI+GA GNALISMYAKSG+VEIA+ IVEL GTSSLNVIAFTS+LDGYVKIGD++PAREIFDSLKCRDVVAWTAMIVGYAQNGL + AL LFRSMI EGP+PN+YTLAAVLSVFSSLASLD GKQLHA AIRLEEVSSVSVGNALITMYSRSGSIKDARK+FNQI + RDTLTWTSMI+ALAQHGLGNEAIELFE MLK NLKPDHITYV VLSACTHVGLVEQGK YFNLMKNV++IEPT+SHYACMIDLFGRAGLL+EAYNFIR+MPIEPDV+AWGSLLSSCRV+KNVDLAKVA EKL LIDPNNSGAYSALANTLSACGKW DAAKVRK MKDRAVKKEQG SWVQI NKVHIFGVEDALHPQR+AIYRMISK+W+EIKKMGF PDT+SVLHDLEQEVKEQILRHHSEKLAIAFALIN+P + TLRIMKNLRVCNDCHSAIKYIS+LV REIIVRDATRFHHFKDGSCSCQDYW Sbjct: 1 MQTPNPHSYSDTCVYLLQSAIKSRDPFTGRCIHARLIKHGLCLGVFLTNNLLNFYAKTSSFSDAHRLFDEMPLKTTFSWNTILSAYAKGGNLDSARKVFDDIPQPDSVSWTTMIVGYNHLGLFNSAIHTFLHMISSGISPTQFTFTNVLASCAAAQALDVGRKLHSFAVKLGLSGLVPVANSLLNMYAKCGDSVMVKVVFDRMRLKDKSTWNTMISMHMQFGRLDLALALFDQMSDPDIVSWNSIITGYCHQGYDIKALETFSFMLESSSLKPDKFTLASVLSACANLESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGSVEIAQRIVELTGTSSLNVIAFTSILDGYVKIGDMNPAREIFDSLKCRDVVAWTAMIVGYAQNGLISDALVLFRSMIREGPKPNNYTLAAVLSVFSSLASLDNGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNQICTYRDTLTWTSMILALAQHGLGNEAIELFEKMLKINLKPDHITYVSVLSACTHVGLVEQGKRYFNLMKNVHNIEPTSSHYACMIDLFGRAGLLQEAYNFIRNMPIEPDVVAWGSLLSSCRVYKNVDLAKVATEKLLLIDPNNSGAYSALANTLSACGKWEDAAKVRKSMKDRAVKKEQGFSWVQIKNKVHIFGVEDALHPQREAIYRMISKLWREIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPEHTTLRIMKNLRVCNDCHSAIKYISMLVEREIIVRDATRFHHFKDGSCSCQDYW 782
BLAST of rna-XM_004496675.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8M4X4|A0A8B8M4X4_ABRPR (Pentatricopeptide repeat-containing protein At2g22070 OS=Abrus precatorius OX=3816 GN=LOC113870771 PE=3 SV=1) HSP 1 Score: 1377.07 bits (3563), Expect = 0.000e+0 Identity = 658/782 (84.14%), Postives = 709/782 (90.66%), Query Frame = 0 Query: 1 METPKPHFHSDAYVHLLQSAIKSRDSFTGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 M+TP YVHLLQSAI S+D F GR IHA+IIKHGL VFLMNNLLNFY+K GS ++AHR+F EMPLKTTFSWNT+LSAY KGG +E ARR+FDEIPQPDSVSWTT+I+GYN GL N+A+ MFL MVSSGISPTQFTFT VLASCAAT LD+G+KVHSF+VKLG SGVVPVANSL+NMYAKSGDS+MAKVVFD MRLKDKSTWN MIS+ MQ GRLD+AL+LF QM DPDIV+WNSIIAGYCHQG+D KALETFS M SSSLKPDKFTLGSVLSACANLESLK G Q+HA+I+RAD+DISGA NALISMYAKSGAVEIAR IVEL GTSSLNVIAFTSLLDGY KIGD++PAREIFDSLKCRDVVAWTAMIVGY QNGL + ALELFR MI EGP+PN+YTLAAV+SV SS+ASLD GKQLHATAIRLEEVSSVSVGNALIT YSRSGSIKDARKVF QI S RD L+WTSMIIALAQHGLGNEAIELFE MLK NLKPDHITYVGVLSACTHVGLVEQGK YFNLMKNV++IEPT+SHYACMIDLFGRAGLLEEAYNFIR+MPIEPD IAWGSLLSSCRVHKNVDLAKVAAE L L+DPNNSGAYSALANTLSACGKW DAAKVRK MKDRAVKKEQG SWVQIHNKVHIFG +DALH QRDAIY+++S+IW+EIKKMGFTPDTDSVLHDLE EVKEQILRHHSEKLAIAFA+IN+P + TLRIMKNLRVCNDCHSAIKYIS+LVGREIIVRDATRFHHFKDGSCSCQDYW Sbjct: 1 MQTP------GIYVHLLQSAINSKDPFIGRSIHAQIIKHGLSLGVFLMNNLLNFYAKVGSLSDAHRLFREMPLKTTFSWNTILSAYVKGGDLEPARRVFDEIPQPDSVSWTTMIVGYNHLGLSNSAIHMFLNMVSSGISPTQFTFTNVLASCAATQALDVGKKVHSFVVKLGLSGVVPVANSLLNMYAKSGDSVMAKVVFDRMRLKDKSTWNTMISMQMQYGRLDLALSLFEQMIDPDIVSWNSIIAGYCHQGYDIKALETFSSMLESSSLKPDKFTLGSVLSACANLESLKFGMQIHAHILRADVDISGAVRNALISMYAKSGAVEIARRIVELTGTSSLNVIAFTSLLDGYFKIGDINPAREIFDSLKCRDVVAWTAMIVGYTQNGLLSDALELFRLMIREGPKPNNYTLAAVISVISSMASLDHGKQLHATAIRLEEVSSVSVGNALITAYSRSGSIKDARKVFKQICSNRDKLSWTSMIIALAQHGLGNEAIELFERMLKINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLFGRAGLLEEAYNFIRNMPIEPDAIAWGSLLSSCRVHKNVDLAKVAAENLLLVDPNNSGAYSALANTLSACGKWEDAAKVRKSMKDRAVKKEQGFSWVQIHNKVHIFGADDALHQQRDAIYQLMSRIWREIKKMGFTPDTDSVLHDLEPEVKEQILRHHSEKLAIAFAIINTPEHTTLRIMKNLRVCNDCHSAIKYISMLVGREIIVRDATRFHHFKDGSCSCQDYW 776
BLAST of rna-XM_004496675.3 vs. UniProtKB/TrEMBL
Match: tr|K7K7U2|K7K7U2_SOYBN (DYW domain-containing protein OS=Glycine max OX=3847 GN=100813220 PE=3 SV=1) HSP 1 Score: 1357.04 bits (3511), Expect = 0.000e+0 Identity = 654/781 (83.74%), Postives = 707/781 (90.52%), Query Frame = 0 Query: 3 TPKPHFHSDAYVHLLQSAIKSRDSFTGRFIHARIIKHGLHFT-VFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 TP P HSDA VHLLQSAIKSRD F GR IHARIIKHGL + VFL NNLLN Y KTGS ++AHR+F+EMPLKTTFSWNT+LSA+AK G++++ARR+FDEIPQPDSVSWTT+I+GYN GLF +AV FLRMVSSGISPTQFTFT VLASCAA LD+G+KVHSF+VKLG SGVVPVANSL+NMYAK GDS+MAKVVFD MRLKD STWN MIS+HMQ + D+ALALF QMTDPDIV+WNSII GYCHQG+D +ALETFS M +SSSLKPDKFTLGSVLSACAN ESLKLGKQ+HA+IVRAD+DI+GA GNALISMYAKSGAVE+A IVE+ GT SLNVIAFTSLLDGY KIGD+ PAR IFDSLK RDVVAWTAMIVGYAQNGL + AL LFR MI EGP+PN+YTLAAVLSV SSLASLD GKQLHA AIRLEEVSSVSVGNALITMYSRSGSIKDARK+FN I S RDTLTWTSMI++LAQHGLGNEAIELFE ML+ NLKPDHITYVGVLSACTHVGLVEQGK YFNLMKNV++IEPT+SHYACMIDL GRAGLLEEAYNFIR+MPIEPDV+AWGSLLSSCRVHK VDLAKVAAEKL LIDPNNSGAY ALANTLSACGKW DAAKVRK MKD+AVKKEQG SWVQI NKVHIFGVEDALHPQRDAIY MISKIWKEIKKMGF PDT+SVLHDLEQEVKEQILRHHSEKLAIAFALIN+P + T+RIMKNLRVCNDCHSAI+YIS+LV REIIVRDATRFHHFKDGSCSCQDYW Sbjct: 5 TPNPPSHSDACVHLLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785
BLAST of rna-XM_004496675.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445LMP6|A0A445LMP6_GLYSO (Pentatricopeptide repeat-containing protein isoform A OS=Glycine soja OX=3848 GN=D0Y65_003667 PE=3 SV=1) HSP 1 Score: 1357.04 bits (3511), Expect = 0.000e+0 Identity = 654/781 (83.74%), Postives = 707/781 (90.52%), Query Frame = 0 Query: 3 TPKPHFHSDAYVHLLQSAIKSRDSFTGRFIHARIIKHGLHFT-VFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 TP P HSDA VHLLQSAIKSRD F GR IHARIIKHGL + VFL NNLLN Y KTGS ++AHR+F+EMPLKTTFSWNT+LSA+AK G++++ARR+FDEIPQPDSVSWTT+I+GYN GLF +AV FLRMVSSGISPTQFTFT VLASCAA LD+G+KVHSF+VKLG SGVVPVANSL+NMYAK GDS+MAKVVFD MRLKD STWN MIS+HMQ + D+ALALF QMTDPDIV+WNSII GYCHQG+D +ALETFS M +SSSLKPDKFTLGSVLSACAN ESLKLGKQ+HA+IVRAD+DI+GA GNALISMYAKSGAVE+A IVE+ GT SLNVIAFTSLLDGY KIGD+ PAR IFDSLK RDVVAWTAMIVGYAQNGL + AL LFR MI EGP+PN+YTLAAVLSV SSLASLD GKQLHA AIRLEEVSSVSVGNALITMYSRSGSIKDARK+FN I S RDTLTWTSMI++LAQHGLGNEAIELFE ML+ NLKPDHITYVGVLSACTHVGLVEQGK YFNLMKNV++IEPT+SHYACMIDL GRAGLLEEAYNFIR+MPIEPDV+AWGSLLSSCRVHK VDLAKVAAEKL LIDPNNSGAY ALANTLSACGKW DAAKVRK MKD+AVKKEQG SWVQI NKVHIFGVEDALHPQRDAIY MISKIWKEIKKMGF PDT+SVLHDLEQEVKEQILRHHSEKLAIAFALIN+P + T+RIMKNLRVCNDCHSAI+YIS+LV REIIVRDATRFHHFKDGSCSCQDYW Sbjct: 5 TPNPPSHSDACVHLLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785
BLAST of rna-XM_004496675.3 vs. UniProtKB/TrEMBL
Match: tr|V7BBQ2|V7BBQ2_PHAVU (DYW domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G057100g PE=3 SV=1) HSP 1 Score: 1354.73 bits (3505), Expect = 0.000e+0 Identity = 646/782 (82.61%), Postives = 707/782 (90.41%), Query Frame = 0 Query: 1 METPKPHFHSDAYVHLLQSAIKSRDSFTGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 M+ P P SD + LLQSAIKSRD F GR IHA IIKHGL VFLMNNLLNFY+KTGSF++AHRVF+EMPLKTTFSWNT+LS +AKGGH++ AR++FD+IPQPDSVSWTT+I+GYN GLFN+A+ FLRMVSSGISPTQFTFT V+ASC+A+ L+IG KVHSF+VKLG SGVVPVANSL+NMYAK GDS+ AK VF+ MRLKDKST+N MIS+HMQ GRLD+AL+LF +++DPDIV+WNSII GYCHQG+D KALETFS M +SSSL PDKFTL SVLSACANLESLKLGKQ+HA+IVR DIDI+G GNALISMYAKSGAV+IAR IV+L GTSSLNVIAFT+LLDGYVKIGD++PAREIFDSLKC DVVAWTAMIVGYA NGL + AL LFRSMI EGP+PNSYTLAA+LSVFSSLASLD GKQLHA AIRLEE SS+SVGNALITMYSRSGSI+DARK+FNQI S RDTLTWTSMI+ALAQHGLGN AIELFE MLK NLKPDHITYV VLSACTHVGLVEQGK YFNLMKNV++IEPT+SHYACMIDL GRAGLLEEAYNFI++MPIEPDV+AWGSLLSSCRVHKNVDLA VAA+KL IDPNNSGAYSALANTLSACGKW DAAKVRK MKDRAVKKEQG SWVQI NKVH FGV+DALHPQRDAIYRMISKIW EIKKMGF PDT+SVLHDLEQEVKEQILRHHSEKLAIAFALIN+P +ATLRIMKNLRVCNDCHSAIKYIS LV REIIVRD TRFHHFKDGSCSCQDYW Sbjct: 5 MQNPNPPSPSDKWPFLLQSAIKSRDPFLGRCIHAPIIKHGLCLGVFLMNNLLNFYAKTGSFSDAHRVFDEMPLKTTFSWNTILSMHAKGGHLDYARQVFDDIPQPDSVSWTTMIVGYNDLGLFNSAIYTFLRMVSSGISPTQFTFTNVIASCSASKALNIGNKVHSFVVKLGLSGVVPVANSLLNMYAKCGDSVKAKFVFERMRLKDKSTFNTMISMHMQLGRLDLALSLFDEISDPDIVSWNSIITGYCHQGYDIKALETFSSMLKSSSLNPDKFTLASVLSACANLESLKLGKQIHAHIVRVDIDIAGPVGNALISMYAKSGAVQIARRIVQLTGTSSLNVIAFTALLDGYVKIGDLNPAREIFDSLKCPDVVAWTAMIVGYAHNGLISNALALFRSMIREGPKPNSYTLAALLSVFSSLASLDHGKQLHAVAIRLEEASSISVGNALITMYSRSGSIRDARKIFNQICSYRDTLTWTSMILALAQHGLGNVAIELFEKMLKINLKPDHITYVSVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIKTMPIEPDVVAWGSLLSSCRVHKNVDLAIVAAKKLLFIDPNNSGAYSALANTLSACGKWEDAAKVRKSMKDRAVKKEQGFSWVQIQNKVHTFGVDDALHPQRDAIYRMISKIWNEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPEHATLRIMKNLRVCNDCHSAIKYISKLVKREIIVRDTTRFHHFKDGSCSCQDYW 786
BLAST of rna-XM_004496675.3 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4PJ81|A0A6A4PJ81_LUPAL (Putative tetratricopeptide-like helical domain, DYW domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00040617 PE=3 SV=1) HSP 1 Score: 1352.42 bits (3499), Expect = 0.000e+0 Identity = 643/778 (82.65%), Postives = 702/778 (90.23%), Query Frame = 0 Query: 5 KPHFHSDAYVHLLQSAIKSRDSFTGRFIHARIIKHGLHFTVFLMNNLLNFYSKTGSFTEAHRVFNEMPLKTTFSWNTVLSAYAKGGHIETARRMFDEIPQPDSVSWTTIILGYNQKGLFNTAVQMFLRMVSSGISPTQFTFTKVLASCAATGTLDIGRKVHSFIVKLGFSGVVPVANSLVNMYAKSGDSLMAKVVFDSMRLKDKSTWNIMISLHMQCGRLDVALALFHQMTDPDIVTWNSIIAGYCHQGHDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQVHAYIVRADIDISGAAGNALISMYAKSGAVEIARTIVELRGTSSLNVIAFTSLLDGYVKIGDVSPAREIFDSLKCRDVVAWTAMIVGYAQNGLANGALELFRSMIIEGPRPNSYTLAAVLSVFSSLASLDLGKQLHATAIRLEEVSSVSVGNALITMYSRSGSIKDARKVFNQISSKRDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTASHYACMIDLFGRAGLLEEAYNFIRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKWADAAKVRKLMKDRAVKKEQGLSWVQIHNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINSPGYATLRIMKNLRVCNDCHSAIKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782 KP FHSD YV+LLQSAIK+RD F GR IHA+IIKHGLHF +FLMNNLLNFY+KT +F+ AH +F+EMPLKTTFSWNT+LSAYAKGG+++TA +FD IP PDSVSWTT+I+GYNQ GLF+ + MFL MV G+SPTQFTFT VLASCAAT L GRKVHSFIVKLG SGVV VANSLVNMYAKSGD++MAK+VFD MRLKDKS+WN MIS+HMQ G+ D+AL+LF QMTD DIV+WNSII GY HQG++ KALETFS M +SSSL PDKFT GS+LSACANLE+LKLG+Q+H +IVRA IDISGA NALISMYAKSG V+IA+ IVEL GTSSLNVIAFTSLLDGYVKIGD++PAR+IFDSLKCRDVVAWTAMIVGYAQNGL + ALE+FR MI EGP+PNSYTLA +LSVFSSLASLD G+QLHA+AIRLEEV SVSVGNALITMYSRSGSIKDAR VF QI S DTLTWTSMIIALAQHGLG+EAI+LFE MLKFN+KPDH+TYVGVLSACTHVGLV QGK YFNLM NV+HIEPT SHYACMIDL GRAGLLEEAYNFI+SMPIEPD+I WGSLLSSCRVHKNVDLAKVAAEKL LIDPNNSGAYSALANT SACGKW DAAK+RK MKDRAVKKEQG SWVQI +KVHIFGVED LHPQ+DAIYRMISKIWKEIK MGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALIN+PGY TLRIMKNLRVCNDCHSAIKYIS LVGREIIVRDATRFHHFK+GSCSCQDYW Sbjct: 3 KPPFHSDLYVYLLQSAIKTRDPFLGRSIHAQIIKHGLHFGLFLMNNLLNFYAKTATFSHAHSLFDEMPLKTTFSWNTILSAYAKGGNLKTAHHVFDLIPHPDSVSWTTMIVGYNQMGLFHNGIHMFLNMVFHGVSPTQFTFTNVLASCAATRALYTGRKVHSFIVKLGLSGVVSVANSLVNMYAKSGDTVMAKIVFDRMRLKDKSSWNTMISMHMQLGQFDLALSLFEQMTDQDIVSWNSIITGYIHQGYEIKALETFSSMLKSSSLNPDKFTFGSILSACANLENLKLGRQIHGHIVRAGIDISGAVRNALISMYAKSGDVKIAQRIVELTGTSSLNVIAFTSLLDGYVKIGDINPARDIFDSLKCRDVVAWTAMIVGYAQNGLISDALEIFRLMIREGPKPNSYTLATILSVFSSLASLDHGRQLHASAIRLEEVPSVSVGNALITMYSRSGSIKDARTVFKQICSNTDTLTWTSMIIALAQHGLGSEAIQLFEKMLKFNIKPDHVTYVGVLSACTHVGLVGQGKFYFNLMTNVHHIEPTCSHYACMIDLLGRAGLLEEAYNFIQSMPIEPDIIVWGSLLSSCRVHKNVDLAKVAAEKLLLIDPNNSGAYSALANTFSACGKWEDAAKIRKSMKDRAVKKEQGFSWVQIKDKVHIFGVEDCLHPQKDAIYRMISKIWKEIKIMGFTPDTDSVLHDLEQEVKEQILRHHSEKLAIAFALINTPGYTTLRIMKNLRVCNDCHSAIKYISKLVGREIIVRDATRFHHFKNGSCSCQDYW 780 The following BLAST results are available for this feature:
BLAST of rna-XM_004496675.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11) Total hits: 10
BLAST of rna-XM_004496675.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot) Total hits: 10
BLAST of rna-XM_004496675.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_004496675.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496675.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496675.3; organism=Cicer arietinum; type=mRNA; length=2349bpback to top protein sequence of rna-XM_004496675.3_CaCDCfrontier-NCBI_v1 >rna-XM_004496675.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496675.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496675.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=782bpback to top mRNA from alignment at chr4:13740630..13744578+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_004496675.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496675.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496675.3; organism=Cicer arietinum; type=mRNA; length=3949bp; location=Sequence derived from: chr4:13740630..13744578+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at chr4:13740630..13744578+ >rna-XM_004496675.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004496675.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004496675.3; organism=Cicer arietinum; type=CDS; length=2349bp; location=Sequence derived from: chr4:13740630..13744578+ (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|