rna-XM_004498532.3

Transcript Overview
Namerna-XM_004498532.3
Unique Namerna-XM_004498532.3_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length324
Productflowering-promoting factor 1-like protein 2
References
External references for this mRNA
DatabaseAccession
GeneID101489303
GenBankXM_004498532.3
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr4chromosomechr4:41355644..41356439 -Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ancanL0087Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cacanL131Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0286Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0335Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cacanL182Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascanL493Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascanL665Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ancanL0689Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0880Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cancanR130Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanL0402Cicer arietinum ICC 4958 genome v2Cicer arietinum
caicanL0522Cicer arietinum ICC 4958 genome v2Cicer arietinum
canccR0433Cajanus cajan Asha genome v1.0Cajanus cajan
canccR0477Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR355Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR396Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR430Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cantifR224Vicia faba cv. Tiffany genome v1.0Vicia faba
canvrvR278Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canpvR282Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvfhR234Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvrvR290Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR233Vicia faba cv. Tiffany genome v1.0Vicia faba
canvfhR242Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canpvR391Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvssR285Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR319Vicia sativa cv. Studenica genome v1.0Vicia sativa
canzwsR226Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR286Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canzwsR257Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR302Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR309Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuR316Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canpsR276Pisum sativum Cameor genome v1aPisum sativum
canpsR336Pisum sativum Cameor genome v1aPisum sativum
canpsR355Pisum sativum Cameor genome v1aPisum sativum
avjcanL476Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL664Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR214Cicer arietinum
cancarR253Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Va04G062200.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Va07G060100.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_014648804.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-KK1_005000Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_014645376.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr09.1685Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.001G058400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun08g063300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.3g200760.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Cr_09869.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
evm.model.Chr08.108Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.009G100300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun09g201700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-KK1_003477Cajanus cajan Asha genome v1.0Cajanus cajan
rna-TanjilR_19340Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Tiffany.R1.3g165680.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat06G0088500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
jg35839.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
LR48_mrnaVigan07g235200Vigna angularis Jingnong 6 genome v1.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Ca_09661.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_10972Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101489303gene-LOC101489303_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_004498532.3-1exon-XM_004498532.3-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_004498589.1cds-XP_004498589.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_004498532.3_CaCDCfrontier-NCBI_v1rna-XM_004498532.3_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_004498532.3_CaCDCfrontier-NCBI_v1rna-XM_004498532.3_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


Homology
[Close]
BLAST of rna-XM_004498532.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:3358934-3359272 FORWARD LENGTH=112)

HSP 1 Score: 157.918 bits (398), Expect = 1.958e-51
Identity = 76/110 (69.09%), Postives = 88/110 (80.00%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLVENPQGEDG----RNGKRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRD 106
            MSGVWVF NGV RLVENP    G     +G+R +LV+LPTGE V+SY+ LE+IL  LGWERY+ GD DL Q+HK SSIDLISLP+DFSKFNS+ MYDIV+KNPN FHVRD
Sbjct:    1 MSGVWVFNNGVIRLVENPNQSGGVSTQSHGRRNVLVYLPTGEAVSSYSSLEQILRSLGWERYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVRD 110
[Close]
BLAST of rna-XM_004498532.3 vs. Araport11
Match: | (Symbols: ATFPF1, FPF1 | ARABIDOPSIS FLOWERING PROMOTING FACTOR 1, FLOWERING PROMOTING FACTOR 1 | chr5:8541822-8542154 FORWARD LENGTH=110)

HSP 1 Score: 157.532 bits (397), Expect = 2.701e-51
Identity = 79/110 (71.82%), Postives = 92/110 (83.64%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLVENP--QGEDGRNGKRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDG-DPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK 107
            MSGVWVFKNGV RLVENP   G D +N +RK++V+LPTGEVV+SY+ LE+IL  LGWERY+ G D DL QFHK SSIDLISLP+DF+KFNS+ MYDIV+KNPN FHVRD 
Sbjct:    1 MSGVWVFKNGVIRLVENPNQSGSDTQN-RRKVMVYLPTGEVVSSYSTLEQILQSLGWERYFGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRDS 109
[Close]
BLAST of rna-XM_004498532.3 vs. Araport11
Match: | (Symbols: ATFPF1, FPF1 | ARABIDOPSIS FLOWERING PROMOTING FACTOR 1, FLOWERING PROMOTING FACTOR 1 | chr5:8541714-8542154 FORWARD LENGTH=146)

HSP 1 Score: 157.918 bits (398), Expect = 7.948e-51
Identity = 79/110 (71.82%), Postives = 92/110 (83.64%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLVENP--QGEDGRNGKRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDG-DPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK 107
            MSGVWVFKNGV RLVENP   G D +N +RK++V+LPTGEVV+SY+ LE+IL  LGWERY+ G D DL QFHK SSIDLISLP+DF+KFNS+ MYDIV+KNPN FHVRD 
Sbjct:   37 MSGVWVFKNGVIRLVENPNQSGSDTQN-RRKVMVYLPTGEVVSSYSTLEQILQSLGWERYFGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRDS 145
[Close]
BLAST of rna-XM_004498532.3 vs. Araport11
Match: | (Symbols: ATFPF1, FPF1 | ARABIDOPSIS FLOWERING PROMOTING FACTOR 1, FLOWERING PROMOTING FACTOR 1 | chr5:8541633-8542154 FORWARD LENGTH=173)

HSP 1 Score: 158.303 bits (399), Expect = 1.070e-50
Identity = 79/109 (72.48%), Postives = 92/109 (84.40%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLVENP--QGEDGRNGKRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDG-DPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRD 106
            MSGVWVFKNGV RLVENP   G D +N +RK++V+LPTGEVV+SY+ LE+IL  LGWERY+ G D DL QFHK SSIDLISLP+DF+KFNS+ MYDIV+KNPN FHVRD
Sbjct:   64 MSGVWVFKNGVIRLVENPNQSGSDTQN-RRKVMVYLPTGEVVSSYSTLEQILQSLGWERYFGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRD 171
[Close]
BLAST of rna-XM_004498532.3 vs. Araport11
Match: | (Symbols: FLP1 | FPF1-like protein 1 | chr4:15230008-15230382 FORWARD LENGTH=124)

HSP 1 Score: 146.747 bits (369), Expect = 9.556e-47
Identity = 78/123 (63.41%), Postives = 89/123 (72.36%), Query Frame = 0 
Query:    1 MSGVWVF-KNGVFRLVENPQGE--------------DGRNGKRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPD--LYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRD 106
            MSGVWVF KNGV RLVENP  +                +  +RK+LVHLP+ EVV+SY  LE+IL  LGWERYY GD    L QFHK +SIDLISLP+DFSKFNSI+MYDIV+KNPNVFHVRD
Sbjct:    1 MSGVWVFNKNGVMRLVENPYNQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVVSSYGSLEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFSKFNSIHMYDIVVKNPNVFHVRD 123
[Close]
BLAST of rna-XM_004498532.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LXB5|FLP2_ARATH (Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLP2 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.872e-50
Identity = 76/110 (69.09%), Postives = 88/110 (80.00%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLVENPQGEDG----RNGKRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRD 106
            MSGVWVF NGV RLVENP    G     +G+R +LV+LPTGE V+SY+ LE+IL  LGWERY+ GD DL Q+HK SSIDLISLP+DFSKFNS+ MYDIV+KNPN FHVRD
Sbjct:    1 MSGVWVFNNGVIRLVENPNQSGGVSTQSHGRRNVLVYLPTGEAVSSYSSLEQILRSLGWERYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVRD 110
[Close]
BLAST of rna-XM_004498532.3 vs. UniProtKB/Swiss-Prot
Match: sp|O23624|FPF1_ARATH (Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 2.583e-50
Identity = 79/110 (71.82%), Postives = 92/110 (83.64%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLVENP--QGEDGRNGKRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDG-DPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK 107
            MSGVWVFKNGV RLVENP   G D +N +RK++V+LPTGEVV+SY+ LE+IL  LGWERY+ G D DL QFHK SSIDLISLP+DF+KFNS+ MYDIV+KNPN FHVRD 
Sbjct:    1 MSGVWVFKNGVIRLVENPNQSGSDTQN-RRKVMVYLPTGEVVSSYSTLEQILQSLGWERYFGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRDS 109
[Close]
BLAST of rna-XM_004498532.3 vs. UniProtKB/Swiss-Prot
Match: sp|O24340|FPF1_SINAL (Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 4.773e-50
Identity = 77/109 (70.64%), Postives = 90/109 (82.57%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLVENPQGEDG-RNGKRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDG-DPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK 107
            MSGVWVFKNGV RLVENP    G  N +RK++V+LPTGEV++SY+ LE+IL  LGWERY+ G D DL QFHK SSIDLISLPKDF+KF+S+ MYDIV+KNPN FHVRD 
Sbjct:    1 MSGVWVFKNGVIRLVENPNQSGGDTNSRRKVMVYLPTGEVISSYSTLEQILRSLGWERYFGGGDTDLLQFHKRSSIDLISLPKDFTKFSSVYMYDIVVKNPNYFHVRDS 109
[Close]
BLAST of rna-XM_004498532.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q5Q0B3|FLP1_ARATH (Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FLP1 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 9.138e-46
Identity = 78/123 (63.41%), Postives = 89/123 (72.36%), Query Frame = 0 
Query:    1 MSGVWVF-KNGVFRLVENPQGE--------------DGRNGKRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPD--LYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRD 106
            MSGVWVF KNGV RLVENP  +                +  +RK+LVHLP+ EVV+SY  LE+IL  LGWERYY GD    L QFHK +SIDLISLP+DFSKFNSI+MYDIV+KNPNVFHVRD
Sbjct:    1 MSGVWVFNKNGVMRLVENPYNQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVVSSYGSLEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFSKFNSIHMYDIVVKNPNVFHVRD 123
[Close]
BLAST of rna-XM_004498532.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LGE3|FLP1_ORYSJ (Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAA1 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.098e-44
Identity = 69/109 (63.30%), Postives = 81/109 (74.31%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLVENPQGEDGR---NGKRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRD 106
            MSGVWVFKNGV RLVE  Q   G     G+RK LVH P+G+VV+SYA LE  L  LGWERYY+ DP L+QFHK  S+DLISLP DFS F+S++MYDIV+KN + F V D
Sbjct:    1 MSGVWVFKNGVVRLVEKQQATAGTAVAGGRRKALVHTPSGQVVSSYAALEARLTALGWERYYE-DPSLFQFHKRGSLDLISLPADFSAFSSVHMYDIVVKNRDSFRVVD 108
[Close]
BLAST of rna-XM_004498532.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q0E1D7|FLP3_ORYSJ (Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0460200 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.947e-40
Identity = 64/113 (56.64%), Postives = 81/113 (71.68%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLVENPQGEDGRNG-------KRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRD 106
            M+GVWVFK+G+ R VENP  E+  +        +RK+LVH+P+GEVV SY  LER L  LGWERY   DP L QFH+ S++ LIS+P+DFSKF  ++MYDIV+K  NVF VRD
Sbjct:    1 MAGVWVFKDGIVRRVENPGSEESSSAGDGGGGGRRKVLVHVPSGEVVASYEVLERRLRELGWERYLT-DPCLLQFHQRSTVHLISVPRDFSKFKLVHMYDIVVKTRNVFEVRD 112
[Close]
BLAST of rna-XM_004498532.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8LR63|FLP2_ORYSJ (Flowering-promoting factor 1-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0933500 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 6.250e-39
Identity = 70/126 (55.56%), Postives = 82/126 (65.08%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLVENPQGEDGRNG-------------KRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPD-------LYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRD 106
            MSGVWVF+NGV +LVENP       G             +RK L+H+PTGEVVTSYA LER L  LGWERYY G          + QFHK SS+DLISLPKDFS+F S++MYDIV+KN + F V D
Sbjct:    1 MSGVWVFRNGVVKLVENPPASANSGGGGGGGGGGGGGGIRRKALLHMPTGEVVTSYASLERKLAALGWERYYSGGGGAAAAAAMMLQFHKRSSVDLISLPKDFSQFGSVHMYDIVVKNRDAFRVID 126
[Close]
BLAST of rna-XM_004498532.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q0JEF5|FLP4_ORYSJ (Flowering-promoting factor 1-like protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0282400 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.428e-31
Identity = 58/111 (52.25%), Postives = 76/111 (68.47%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLV--ENPQGEDGRNGKR---KMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRD 106
            M+GVWVF++G+ R    E P    G  G     K+LVH+P+ EVVTSY  LER L  LGWERY + DP L QFH+ S++ LIS+P+DFS+   ++MYD+V+K  NVF VRD
Sbjct:    1 MAGVWVFEDGMVRRADSEAPSRGRGVGGGGGGGKVLVHVPSSEVVTSYEVLERRLRELGWERYLN-DPCLLQFHQRSTVHLISVPRDFSRLKLVHMYDVVVKTRNVFEVRD 110
[Close]
BLAST of rna-XM_004498532.3 vs. UniProtKB/Swiss-Prot
Match: sp|A3BNA1|FLP5_ORYSJ (Flowering-promoting factor 1-like protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0671000 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.599e-26
Identity = 51/105 (48.57%), Postives = 63/105 (60.00%), Query Frame = 0 
Query:    3 GVWVFKN-GVFRLVENPQGEDGRNGKRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRD 106
            GVWVF+N GV  L E           RK LVH+ T EV+ S   LER L  LGWERYY+    L    +  S DLIS+P+DFS+F S +MYD+V+KN + F V D
Sbjct:    5 GVWVFRNNGVMELEEQATS-------RKALVHVATSEVIRSTEALERRLGALGWERYYEDRATLQLHRRDGSADLISIPRDFSRFRSTHMYDVVVKNRDHFKVVD 102
[Close]
BLAST of rna-XM_004498532.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y4A6|A0A1S2Y4A6_CICAR (Flowering-promoting factor 1-like protein 2 OS=Cicer arietinum OX=3827 GN=LOC101489303 PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.311e-73
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLVENPQGEDGRNGKRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK 107
            MSGVWVFKNGVFRLVENPQGEDGRNGKRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK
Sbjct:    1 MSGVWVFKNGVFRLVENPQGEDGRNGKRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK 107
[Close]
BLAST of rna-XM_004498532.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4W0V9|A0A9D4W0V9_PEA (Flowering-promoting factor 1-like protein 2 OS=Pisum sativum OX=3888 GN=KIW84_060885 PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 3.554e-67
Identity = 100/109 (91.74%), Postives = 104/109 (95.41%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLVENPQGE--DGRNGKRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK 107
            MSGVWVFKNGVFRLVENPQ E  +GR+GKRKMLVHLPTGEVV SYAFLERIL+GLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIV+K PNVFHVRDK
Sbjct:    1 MSGVWVFKNGVFRLVENPQAEASEGRHGKRKMLVHLPTGEVVNSYAFLERILIGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVVKTPNVFHVRDK 109
[Close]
BLAST of rna-XM_004498532.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3LC55|A0A2K3LC55_TRIPR (Flowering-promoting factor 1-like protein 2-like OS=Trifolium pratense OX=57577 GN=L195_g032052 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.056e-65
Identity = 98/109 (89.91%), Postives = 102/109 (93.58%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLVENPQGE--DGRNGKRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK 107
            MSGVWVF  GVFRLVENPQ E  DGR+GKRKMLVHLPTGEVVTSYAFLERIL GLGWERYYDGDPDLYQFHKHSSIDLISLP+DFSKFNSI+MYDIV+K PNVFHVRDK
Sbjct:    1 MSGVWVFNKGVFRLVENPQAEASDGRHGKRKMLVHLPTGEVVTSYAFLERILTGLGWERYYDGDPDLYQFHKHSSIDLISLPRDFSKFNSIHMYDIVVKTPNVFHVRDK 109
[Close]
BLAST of rna-XM_004498532.3 vs. UniProtKB/TrEMBL
Match: tr|A0A151TZB0|A0A151TZB0_CAJCA (Flowering-promoting factor 1 OS=Cajanus cajan OX=3821 GN=KK1_005000 PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.055e-65
Identity = 101/114 (88.60%), Postives = 104/114 (91.23%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLVENPQGE--DGRNGK-----RKMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK 107
            MSGVWVFKNGVFRLVENPQ E  DGR GK     RK+LVHLPTGEVV+SYAFLE+IL GLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK
Sbjct:    1 MSGVWVFKNGVFRLVENPQAEASDGRQGKGSSSKRKVLVHLPTGEVVSSYAFLEQILTGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK 114
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BLAST of rna-XM_004498532.3 vs. UniProtKB/TrEMBL
Match: tr|C6T3W9|C6T3W9_SOYBN (Flowering promoting factor OS=Glycine max OX=3847 GN=100527299 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.477e-65
Identity = 101/114 (88.60%), Postives = 105/114 (92.11%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLVENPQGE--DGRNGK-----RKMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK 107
            MSGVWVFKNGVFRLVENPQ E  DGR+GK     RK+LVHLPTGEVV+SYAFLE+IL GLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK
Sbjct:    1 MSGVWVFKNGVFRLVENPQAEASDGRHGKGSSSKRKVLVHLPTGEVVSSYAFLEQILTGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK 114
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BLAST of rna-XM_004498532.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2NVP1|A0A0B2NVP1_GLYSO (Flowering-promoting factor 1 OS=Glycine soja OX=3848 GN=D0Y65_046437 PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.477e-65
Identity = 101/114 (88.60%), Postives = 105/114 (92.11%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLVENPQGE--DGRNGK-----RKMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK 107
            MSGVWVFKNGVFRLVENPQ E  DGR+GK     RK+LVHLPTGEVV+SYAFLE+IL GLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK
Sbjct:    1 MSGVWVFKNGVFRLVENPQAEASDGRHGKGSSSKRKVLVHLPTGEVVSSYAFLEQILTGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK 114
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BLAST of rna-XM_004498532.3 vs. UniProtKB/TrEMBL
Match: tr|A0A072VNQ2|A0A072VNQ2_MEDTR (Flowering-promoting factor-like protein OS=Medicago truncatula OX=3880 GN=25481879 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.272e-65
Identity = 99/108 (91.67%), Postives = 103/108 (95.37%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLVENPQGE-DGRNGKRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK 107
            MSGVWVFKNGVFRLVENPQ E + R+GKRKMLVHLPTGEVVTSYAFLERIL+GLGWERYYDGD DLYQFHKH SIDLISLPKDFSKFNSI+MYDIVIKNPNVFHVRDK
Sbjct:    1 MSGVWVFKNGVFRLVENPQAESEVRHGKRKMLVHLPTGEVVTSYAFLERILIGLGWERYYDGDVDLYQFHKHCSIDLISLPKDFSKFNSIHMYDIVIKNPNVFHVRDK 108
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BLAST of rna-XM_004498532.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2RIR9|A0A0B2RIR9_GLYSO (Flowering-promoting factor 1 OS=Glycine soja OX=3848 GN=D0Y65_055383 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.931e-65
Identity = 99/113 (87.61%), Postives = 102/113 (90.27%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLVENPQGE------DGRNGKRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK 107
            MSGVWVFKNGVFRLVENPQ E       G + KRKMLVHLPTGEVV+SYAFLE+IL GLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK
Sbjct:    1 MSGVWVFKNGVFRLVENPQAEVSDRHGKGSSSKRKMLVHLPTGEVVSSYAFLEQILTGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK 113
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BLAST of rna-XM_004498532.3 vs. UniProtKB/TrEMBL
Match: tr|A0A6P4E0C2|A0A6P4E0C2_ARADU (Flowering-promoting factor 1-like protein 2 OS=Arachis duranensis OX=130453 GN=LOC107495291 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.598e-65
Identity = 97/110 (88.18%), Postives = 104/110 (94.55%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLVENPQG---EDGRNGKRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK 107
            MSGVWVF NGVFRLVENPQG    DGR+GKRK+LVHLP+GEVV+SY FLE+IL+GLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPN+FHVRDK
Sbjct:    1 MSGVWVFNNGVFRLVENPQGGGSSDGRHGKRKVLVHLPSGEVVSSYTFLEQILIGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNIFHVRDK 110
[Close]
BLAST of rna-XM_004498532.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445CVX3|A0A445CVX3_ARAHY (Flowering-promoting factor OS=Arachis hypogaea OX=3818 GN=Ahy_A06g030323 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.598e-65
Identity = 97/110 (88.18%), Postives = 104/110 (94.55%), Query Frame = 0 
Query:    1 MSGVWVFKNGVFRLVENPQG---EDGRNGKRKMLVHLPTGEVVTSYAFLERILMGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDK 107
            MSGVWVF NGVFRLVENPQG    DGR+GKRK+LVHLP+GEVV+SY FLE+IL+GLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPN+FHVRDK
Sbjct:    1 MSGVWVFNNGVFRLVENPQGGGSSDGRHGKRKVLVHLPSGEVVSSYTFLEQILIGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNIFHVRDK 110
The following BLAST results are available for this feature:
BLAST of rna-XM_004498532.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 5
Match NameE-valueIdentityDescription
|1.958e-5169.09Symbols: no symbol available | no full name availa... [more]
|2.701e-5171.82Symbols: ATFPF1, FPF1 | ARABIDOPSIS FLOWERING PROM... [more]
|7.948e-5171.82Symbols: ATFPF1, FPF1 | ARABIDOPSIS FLOWERING PROM... [more]
|1.070e-5072.48Symbols: ATFPF1, FPF1 | ARABIDOPSIS FLOWERING PROM... [more]
|9.556e-4763.41Symbols: FLP1 | FPF1-like protein 1 | chr4:1523000... [more]
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BLAST of rna-XM_004498532.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 9
Match NameE-valueIdentityDescription
sp|Q9LXB5|FLP2_ARATH1.872e-5069.09Flowering-promoting factor 1-like protein 2 OS=Ara... [more]
sp|O23624|FPF1_ARATH2.583e-5071.82Flowering-promoting factor 1 OS=Arabidopsis thalia... [more]
sp|O24340|FPF1_SINAL4.773e-5070.64Flowering-promoting factor 1 OS=Sinapis alba OX=37... [more]
sp|Q5Q0B3|FLP1_ARATH9.138e-4663.41Flowering-promoting factor 1-like protein 1 OS=Ara... [more]
sp|Q9LGE3|FLP1_ORYSJ5.098e-4463.30Flowering-promoting factor 1-like protein 1 OS=Ory... [more]
sp|Q0E1D7|FLP3_ORYSJ4.947e-4056.64Flowering-promoting factor 1-like protein 3 OS=Ory... [more]
sp|Q8LR63|FLP2_ORYSJ6.250e-3955.56Flowering-promoting factor 1-like protein 2 OS=Ory... [more]
sp|Q0JEF5|FLP4_ORYSJ4.428e-3152.25Flowering-promoting factor 1-like protein 4 OS=Ory... [more]
sp|A3BNA1|FLP5_ORYSJ5.599e-2648.57Flowering-promoting factor 1-like protein 5 OS=Ory... [more]
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BLAST of rna-XM_004498532.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2Y4A6|A0A1S2Y4A6_CICAR3.311e-73100.00Flowering-promoting factor 1-like protein 2 OS=Cic... [more]
tr|A0A9D4W0V9|A0A9D4W0V9_PEA3.554e-6791.74Flowering-promoting factor 1-like protein 2 OS=Pis... [more]
tr|A0A2K3LC55|A0A2K3LC55_TRIPR1.056e-6589.91Flowering-promoting factor 1-like protein 2-like O... [more]
tr|A0A151TZB0|A0A151TZB0_CAJCA2.055e-6588.60Flowering-promoting factor 1 OS=Cajanus cajan OX=3... [more]
tr|C6T3W9|C6T3W9_SOYBN2.477e-6588.60Flowering promoting factor OS=Glycine max OX=3847 ... [more]
tr|A0A0B2NVP1|A0A0B2NVP1_GLYSO2.477e-6588.60Flowering-promoting factor 1 OS=Glycine soja OX=38... [more]
tr|A0A072VNQ2|A0A072VNQ2_MEDTR3.272e-6591.67Flowering-promoting factor-like protein OS=Medicag... [more]
tr|A0A0B2RIR9|A0A0B2RIR9_GLYSO3.931e-6587.61Flowering-promoting factor 1 OS=Glycine soja OX=38... [more]
tr|A0A6P4E0C2|A0A6P4E0C2_ARADU5.598e-6588.18Flowering-promoting factor 1-like protein 2 OS=Ara... [more]
tr|A0A445CVX3|A0A445CVX3_ARAHY5.598e-6588.18Flowering-promoting factor OS=Arachis hypogaea OX=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039274Flowering-promoting factor 1PANTHERPTHR33433FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 1coord: 1..106

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_004498532.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004498532.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004498532.3; organism=Cicer arietinum; type=mRNA; length=324bp
ATGTCAGGTGTTTGGGTGTTTAAGAATGGTGTGTTTCGTTTGGTGGAGAA
TCCTCAAGGAGAAGATGGAAGAAATGGGAAGAGAAAGATGTTGGTTCATT
TGCCAACAGGGGAAGTGGTAACTTCTTATGCTTTTCTTGAGAGAATATTG
ATGGGTTTAGGTTGGGAGAGGTACTATGATGGAGATCCTGATTTATACCA
ATTTCATAAACACTCTTCTATTGACCTAATTTCTCTACCTAAAGATTTTT
CAAAGTTCAATTCCATCAATATGTATGATATTGTCATAAAGAACCCTAAT
GTTTTCCATGTTAGGGATAAGTGA
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protein sequence of rna-XM_004498532.3_CaCDCfrontier-NCBI_v1

>rna-XM_004498532.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004498532.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004498532.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=107bp
MSGVWVFKNGVFRLVENPQGEDGRNGKRKMLVHLPTGEVVTSYAFLERIL
MGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPN
VFHVRDK
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mRNA from alignment at chr4:41355644..41356439-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_004498532.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004498532.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004498532.3; organism=Cicer arietinum; type=mRNA; length=796bp; location=Sequence derived from: chr4:41355644..41356439- (Cicer arietinum
CCTTCTCATTTCTCTCAACCAAAACCAAAAATCCCTTCATTCTAAATCAT
CTCAATTCTCTTGTTCTACTAAAAAAAATATTTTTTTTACTAAAAAAAAA
TATTAAATACCAATAAATTCATCACACACACAAAAAAAAAAGATATTAGA
TAGATAAGAAAAAATGTCAGGTGTTTGGGTGTTTAAGAATGGTGTGTTTC
GTTTGGTGGAGAATCCTCAAGGAGAAGATGGAAGAAATGGGAAGAGAAAG
ATGTTGGTTCATTTGCCAACAGGGGAAGTGGTAACTTCTTATGCTTTTCT
TGAGAGAATATTGATGGGTTTAGGTTGGGAGAGGTACTATGATGGAGATC
CTGATTTATACCAATTTCATAAACACTCTTCTATTGACCTAATTTCTCTA
CCTAAAGATTTTTCAAAGTTCAATTCCATCAATATGTATGATATTGTCAT
AAAGAACCCTAATGTTTTCCATGTTAGGGATAAGTGAGTTCATTTGGCTA
CTACCACTAGCTAAGTAGCTAGCTAGCTCATGCATTTATCTTTGATTTTT
TTTTTTTATTGGGGTTTTTAGATTTATTTTCATGCTTGTGTGCCTCTATA
CATATATAGCTAGCTAGAGTTTTGTGGAAACTCTAGTGATTTATAAGCTT
GTTGGTTTTCATTTGTTTTTGTTCATAAGAGAGTGAATAAGTAACTATAG
ATGATTGATGTATGACTAGTGTATATTTGCTTGGAGTGCTTTTTGTAACA
TGTTGAGTATTGATTTCTAATAATAACATTATTCCTTGCATTTCAA
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Coding sequence (CDS) from alignment at chr4:41355644..41356439-

>rna-XM_004498532.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004498532.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004498532.3; organism=Cicer arietinum; type=CDS; length=324bp; location=Sequence derived from: chr4:41355644..41356439- (Cicer arietinum
ATGTCAGGTGTTTGGGTGTTTAAGAATGGTGTGTTTCGTTTGGTGGAGAA
TCCTCAAGGAGAAGATGGAAGAAATGGGAAGAGAAAGATGTTGGTTCATT
TGCCAACAGGGGAAGTGGTAACTTCTTATGCTTTTCTTGAGAGAATATTG
ATGGGTTTAGGTTGGGAGAGGTACTATGATGGAGATCCTGATTTATACCA
ATTTCATAAACACTCTTCTATTGACCTAATTTCTCTACCTAAAGATTTTT
CAAAGTTCAATTCCATCAATATGTATGATATTGTCATAAAGAACCCTAAT
GTTTTCCATGTTAGGGATAAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR039274FPF1
Vocabulary: Biological Process
TermDefinition
GO:0009909regulation of flower development