rna-XM_004500659.3

Transcript Overview
Namerna-XM_004500659.3
Unique Namerna-XM_004500659.3_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length585
Producthistone chaperone ASF1B-like
References
External references for this mRNA
DatabaseAccession
GeneID101491774
GenBankXM_004500659.3
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr5chromosomechr5:30238041..30240004 -Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ancanL0300Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cacanL189Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0351Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascanL520Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ancanL0701Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caicanL0534Cicer arietinum ICC 4958 genome v2Cicer arietinum
canccR0632Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR504Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canvrvR396Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR367Vicia faba cv. Tiffany genome v1.0Vicia faba
canpvR481Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvfhR383Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvssR442Vicia sativa cv. Studenica genome v1.0Vicia sativa
canzwsR314Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR377Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR412Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canpsR388Pisum sativum Cameor genome v1aPisum sativum
canpsR403Pisum sativum Cameor genome v1aPisum sativum
avjcanL502Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR320Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Psat05G0002800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-XM_014644506.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg13410.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
LR48_mrnaVigan04g257400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Cr_14032.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigun09g276900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.model.Chr09.1030Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-KK1_024464Cajanus cajan Asha genome v1.0Cajanus cajan
rna-TanjilR_33049Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.009G118100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Va04G072870.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat5g001680.1Pisum sativum Cameor genome v1aPisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Ca_14402.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_04699Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101491774gene-LOC101491774_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_004500659.3_CaCDCfrontier-NCBI_v1rna-XM_004500659.3_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_004500659.3_CaCDCfrontier-NCBI_v1rna-XM_004500659.3_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_004500659.3-3exon-XM_004500659.3-3_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004500659.3-2exon-XM_004500659.3-2_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004500659.3-1exon-XM_004500659.3-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_004500716.1cds-XP_004500716.1_CaCDCfrontier-NCBI_v1_3Cicer arietinumCDS
cds-XP_004500716.1cds-XP_004500716.1_CaCDCfrontier-NCBI_v1_2Cicer arietinumCDS
cds-XP_004500716.1cds-XP_004500716.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS


Homology
[Close]
BLAST of rna-XM_004500659.3 vs. Araport11
Match: | (Symbols: SGA1, ASF1B, SGA01 | anti- silencing function 1b | chr5:15208643-15210064 FORWARD LENGTH=218)

HSP 1 Score: 300.056 bits (767), Expect = 1.510e-104
Identity = 147/169 (86.98%), Postives = 156/169 (92.31%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINFHPENNEN-EEKPPPSE 168
            MS++NITNVTVLDNPA F+ PFQFEISYECL +LKDDLEWKLIYVGSAEDETYDQ+LESVLVGPVNVGNYRFVLQAD PDP KIREEDIIGVTVLLLTCSY+ QEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNIL DKPRVTKFPINFHPEN +   + P P+E
Sbjct:    1 MSSINITNVTVLDNPAPFVNPFQFEISYECLTSLKDDLEWKLIYVGSAEDETYDQVLESVLVGPVNVGNYRFVLQADSPDPLKIREEDIIGVTVLLLTCSYMDQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILTDKPRVTKFPINFHPENEQTLGDGPAPTE 169
[Close]
BLAST of rna-XM_004500659.3 vs. Araport11
Match: | (Symbols: SP7, AtSP7, ASF1A, SGA2 | ANTI- SILENCING FUNCTION 1A | chr1:24892586-24893548 FORWARD LENGTH=196)

HSP 1 Score: 296.975 bits (759), Expect = 1.291e-103
Identity = 146/183 (79.78%), Postives = 157/183 (85.79%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINFHPENNENEEKPPPSEQQPETG---NGQVAV 180
            MSA+ ITNV VL NPA F+ PFQFEISYECL +LKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFV QADPPDPSKI+EEDIIGVTVLLLTCSY+GQEF+RVGYYVNNDY+DEQL+EEPPTKVLIDKVQRNIL DKPRVTKFPI+FHPE  +      P EQ  E     NG+  V
Sbjct:    1 MSAIKITNVAVLHNPAPFVSPFQFEISYECLNSLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVFQADPPDPSKIQEEDIIGVTVLLLTCSYMGQEFLRVGYYVNNDYEDEQLKEEPPTKVLIDKVQRNILSDKPRVTKFPIDFHPEEEQTAATAAPPEQSDEQQPNVNGEAQV 183
[Close]
BLAST of rna-XM_004500659.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LS09|ASF1B_ARATH (Histone chaperone ASF1B OS=Arabidopsis thaliana OX=3702 GN=ASF1B PE=1 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 1.439e-103
Identity = 147/169 (86.98%), Postives = 156/169 (92.31%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINFHPENNEN-EEKPPPSE 168
            MS++NITNVTVLDNPA F+ PFQFEISYECL +LKDDLEWKLIYVGSAEDETYDQ+LESVLVGPVNVGNYRFVLQAD PDP KIREEDIIGVTVLLLTCSY+ QEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNIL DKPRVTKFPINFHPEN +   + P P+E
Sbjct:    1 MSSINITNVTVLDNPAPFVNPFQFEISYECLTSLKDDLEWKLIYVGSAEDETYDQVLESVLVGPVNVGNYRFVLQADSPDPLKIREEDIIGVTVLLLTCSYMDQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILTDKPRVTKFPINFHPENEQTLGDGPAPTE 169
[Close]
BLAST of rna-XM_004500659.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9C9M6|ASF1A_ARATH (Probable histone chaperone ASF1A OS=Arabidopsis thaliana OX=3702 GN=ASF1A PE=1 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 1.230e-102
Identity = 146/183 (79.78%), Postives = 157/183 (85.79%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINFHPENNENEEKPPPSEQQPETG---NGQVAV 180
            MSA+ ITNV VL NPA F+ PFQFEISYECL +LKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFV QADPPDPSKI+EEDIIGVTVLLLTCSY+GQEF+RVGYYVNNDY+DEQL+EEPPTKVLIDKVQRNIL DKPRVTKFPI+FHPE  +      P EQ  E     NG+  V
Sbjct:    1 MSAIKITNVAVLHNPAPFVSPFQFEISYECLNSLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVFQADPPDPSKIQEEDIIGVTVLLLTCSYMGQEFLRVGYYVNNDYEDEQLKEEPPTKVLIDKVQRNILSDKPRVTKFPIDFHPEEEQTAATAAPPEQSDEQQPNVNGEAQV 183
[Close]
BLAST of rna-XM_004500659.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9V464|ASF1_DROME (Histone chaperone asf1 OS=Drosophila melanogaster OX=7227 GN=asf1 PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.427e-71
Identity = 100/153 (65.36%), Postives = 125/153 (81.70%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINF 153
            M+ V+ITNV VLDNP+SF  PFQFE+++EC+  LK+DLEWK+IYVGSAE E +DQ+L+++ VGPV  G + FV QADPPD SKI E D +GVT++LLTCSY GQEF+RVGYYVNNDY D ++RE PPTK L +K+ RNIL  KPRVT+F IN+
Sbjct:    1 MAKVHITNVVVLDNPSSFFNPFQFELTFECIEELKEDLEWKMIYVGSAESEEHDQVLDTIYVGPVPEGRHIFVFQADPPDVSKIPEPDAVGVTIVLLTCSYRGQEFVRVGYYVNNDYADPEMRENPPTKPLFEKLTRNILASKPRVTRFKINW 153
[Close]
BLAST of rna-XM_004500659.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q69DB9|AS1AA_XENLA (Histone chaperone asf1a-A OS=Xenopus laevis OX=8355 GN=asf1aa PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.725e-66
Identity = 98/163 (60.12%), Postives = 121/163 (74.23%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINFHPENNENEEK 163
            M+ V + NV VLDNP+ F  PFQFEI++EC+  L +DLEWK+IYVGSAE E YDQ+L+SVLVGPV  G + FV QAD P+P  I + D +GVTV+L+TC+Y GQEFIRVGYYVNN+Y + +LRE PP K    K+QRNIL   PRVT+F IN+     EN EK
Sbjct:    1 MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSVLVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTETELRENPPVKPDFSKLQRNILASNPRVTRFHINWE----ENTEK 159
[Close]
BLAST of rna-XM_004500659.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q3C1E9|ASF1_CHICK (Histone chaperone ASF1 OS=Gallus gallus OX=9031 GN=ASF1 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.375e-65
Identity = 99/172 (57.56%), Postives = 125/172 (72.67%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINF--HPENNENEEKPPPSEQQ 170
            M+ V + NV VLDNP+ F  PFQFEI++EC+  L +DLEWK+IYVGSAE E YDQ+L+SVLVGPV  G + FV QAD P+P  I + D +GVTV+L+TC+Y GQEFIRVGYYVNN+Y + +LRE PP K    K+QRNIL   PRVT+F IN+  + E  E+ E   P+ Q 
Sbjct:    1 MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSVLVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTETELRENPPVKPDFSKLQRNILASNPRVTRFHINWEDNTEKLEDAESSNPNLQS 172
[Close]
BLAST of rna-XM_004500659.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9Y294|ASF1A_HUMAN (Histone chaperone ASF1A OS=Homo sapiens OX=9606 GN=ASF1A PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.375e-65
Identity = 99/172 (57.56%), Postives = 125/172 (72.67%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINF--HPENNENEEKPPPSEQQ 170
            M+ V + NV VLDNP+ F  PFQFEI++EC+  L +DLEWK+IYVGSAE E YDQ+L+SVLVGPV  G + FV QAD P+P  I + D +GVTV+L+TC+Y GQEFIRVGYYVNN+Y + +LRE PP K    K+QRNIL   PRVT+F IN+  + E  E+ E   P+ Q 
Sbjct:    1 MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSVLVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTETELRENPPVKPDFSKLQRNILASNPRVTRFHINWEDNTEKLEDAESSNPNLQS 172
[Close]
BLAST of rna-XM_004500659.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q2KIG1|ASF1A_BOVIN (Histone chaperone ASF1A OS=Bos taurus OX=9913 GN=ASF1A PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.692e-65
Identity = 94/153 (61.44%), Postives = 117/153 (76.47%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINF 153
            M+ V + NV VLDNP+ F  PFQFEI++EC+  L +DLEWK+IYVGSAE E YDQ+L+SVLVGPV  G + FV QAD P+P  I + D +GVTV+L+TC+Y GQEFIRVGYYVNN+Y + +LRE PP K    K+QRNIL   PRVT+F IN+
Sbjct:    1 MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSVLVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTETELRENPPVKPDFSKLQRNILASNPRVTRFHINW 153
[Close]
BLAST of rna-XM_004500659.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9DAP7|ASF1B_MOUSE (Histone chaperone ASF1B OS=Mus musculus OX=10090 GN=Asf1b PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.694e-65
Identity = 96/153 (62.75%), Postives = 119/153 (77.78%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINF 153
            M+ V++ NV VL+NP+ F  PF+FEIS+EC  AL DDLEWK+IYVGSAE E +DQ+L+SVLVGPV  G + FV QAD P+PS I E D +GVTV+L+TC+Y GQEFIRVGYYVNN+Y D +LRE PP K    ++QRNIL   PRVT+F IN+
Sbjct:    1 MAKVSVLNVAVLENPSPFHSPFRFEISFECSEALSDDLEWKIIYVGSAESEEFDQILDSVLVGPVPAGRHMFVFQADAPNPSLIPETDAVGVTVVLITCTYHGQEFIRVGYYVNNEYPDPELRENPPPKPDFSQLQRNILASNPRVTRFHINW 153
[Close]
BLAST of rna-XM_004500659.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q6DIP1|ASF1B_XENTR (Histone chaperone asf1b OS=Xenopus tropicalis OX=8364 GN=asf1b PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.127e-65
Identity = 96/153 (62.75%), Postives = 116/153 (75.82%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINF 153
            M+ V I N+ VLDNP  F  PFQFEI++EC+  L DDLEWK+IYVGSAE E YDQ+L+SVLVGPV  G + FV QAD P+ S I E D +GVTV+L+TC+Y GQEFIRVGYYVNN+Y D +LRE PP K    ++QRNIL   PRVT+F IN+
Sbjct:    1 MAKVQILNMVVLDNPCPFHNPFQFEITFECIEDLPDDLEWKIIYVGSAESEEYDQVLDSVLVGPVPAGRHMFVFQADAPNSSLIPESDAVGVTVVLITCTYRGQEFIRVGYYVNNEYSDPELRENPPLKPHFGQLQRNILASNPRVTRFHINW 153
[Close]
BLAST of rna-XM_004500659.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q7T0M6|AS1AB_XENLA (Histone chaperone asf1a-B OS=Xenopus laevis OX=8355 GN=asf1ab PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.806e-65
Identity = 96/153 (62.75%), Postives = 115/153 (75.16%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINF 153
            M+ V I N+ VLDNP  F  PFQFEI++EC+  L DDLEWK+IYVGSAE E YDQ L+SVLVGPV  G + FV QAD P+ S I E D +GVTV+L+TC+Y GQEFIRVGYYVNN+Y D +LRE PP K    ++QRNIL   PRVT+F IN+
Sbjct:    1 MAKVQILNMVVLDNPCPFHNPFQFEITFECIEDLPDDLEWKIIYVGSAESEEYDQTLDSVLVGPVPAGRHMFVFQADAPNCSLIPESDAVGVTVVLITCTYRGQEFIRVGYYVNNEYSDPELRENPPLKAHFGQLQRNILASNPRVTRFHINW 153
[Close]
BLAST of rna-XM_004500659.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y8W5|A0A1S2Y8W5_CICAR (Histone chaperone ASF1B-like OS=Cicer arietinum OX=3827 GN=LOC101491774 PE=3 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 1.110e-138
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINFHPENNENEEKPPPSEQQPETGNGQVAVADCDPPNEGDSNIL 194
            MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINFHPENNENEEKPPPSEQQPETGNGQVAVADCDPPNEGDSNIL
Sbjct:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINFHPENNENEEKPPPSEQQPETGNGQVAVADCDPPNEGDSNIL 194
[Close]
BLAST of rna-XM_004500659.3 vs. UniProtKB/TrEMBL
Match: tr|G7J8L0|G7J8L0_MEDTR (Histone chaperone ASF1B-like protein OS=Medicago truncatula OX=3880 GN=11429307 PE=2 SV=1)

HSP 1 Score: 354.369 bits (908), Expect = 8.897e-123
Identity = 177/193 (91.71%), Postives = 181/193 (93.78%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINFHPENNENEEKPPPSEQQPETGNGQ--VAVADCDPPNEGDS 191
            MSAVNITNVTVLDNPASFL PFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVL D+VQRNIL DKPRVTKFPINFHPENNENEE+PPPSEQQPETG  +  +A  D  PPNEG S
Sbjct:    1 MSAVNITNVTVLDNPASFLNPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLTDRVQRNILSDKPRVTKFPINFHPENNENEEQPPPSEQQPETGEEEDPLAAPDTIPPNEGGS 193
[Close]
BLAST of rna-XM_004500659.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NUF1|A0A2Z6NUF1_TRISU (Histone chaperone ASF1A OS=Trifolium subterraneum OX=3900 GN=TSUD_310650 PE=3 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 6.195e-122
Identity = 175/191 (91.62%), Postives = 179/191 (93.72%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINFHPENNENEEKPPPSEQQPETGNGQVAVADCDPPNEGDS 191
            MSAVNITNVTVLDNPASFL PFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRF   ADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVL D+VQRNIL DKPRVTKFPINFHPENNENEE+PPPSEQQPETG   + +AD DPPNEGD 
Sbjct:    1 MSAVNITNVTVLDNPASFLTPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRF---ADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLTDRVQRNILSDKPRVTKFPINFHPENNENEEQPPPSEQQPETGEDPLTLADRDPPNEGDK 188
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BLAST of rna-XM_004500659.3 vs. UniProtKB/TrEMBL
Match: tr|B7FJE1|B7FJE1_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 351.288 bits (900), Expect = 1.646e-121
Identity = 176/193 (91.19%), Postives = 180/193 (93.26%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINFHPENNENEEKPPPSEQQPETGNGQ--VAVADCDPPNEGDS 191
            MSAVNITNVTVLDNPASFL PFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTV LLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVL D+VQRNIL DKPRVTKFPINFHPENNENEE+PPPSEQQPETG  +  +A  D  PPNEG S
Sbjct:    1 MSAVNITNVTVLDNPASFLNPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVPLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLTDRVQRNILSDKPRVTKFPINFHPENNENEEQPPPSEQQPETGEEEDPLAAPDTIPPNEGGS 193
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BLAST of rna-XM_004500659.3 vs. UniProtKB/TrEMBL
Match: tr|I1JSC8|I1JSC8_SOYBN (Histone chaperone ASF1B OS=Glycine max OX=3847 GN=100801694 PE=3 SV=2)

HSP 1 Score: 347.436 bits (890), Expect = 4.498e-120
Identity = 173/191 (90.58%), Postives = 177/191 (92.67%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINFHPENNENEEKPPPSEQQPETGNGQVAVADCDPPNEGDS 191
            MSAVNITNVTVLDNPASFL PFQFEISYECL ALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPP KVLID+VQRNIL DKPRVTKFPINFHPENNENEE+ PPSE   ETG   +AV D DPP+E DS
Sbjct:    1 MSAVNITNVTVLDNPASFLTPFQFEISYECLTALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPPKVLIDRVQRNILSDKPRVTKFPINFHPENNENEEQLPPSEHPSETGEDPLAVVDRDPPDEKDS 191
[Close]
BLAST of rna-XM_004500659.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445KU08|A0A445KU08_GLYSO (Histone chaperone ASF1B isoform A OS=Glycine soja OX=3848 GN=D0Y65_008345 PE=3 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 4.498e-120
Identity = 173/191 (90.58%), Postives = 177/191 (92.67%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINFHPENNENEEKPPPSEQQPETGNGQVAVADCDPPNEGDS 191
            MSAVNITNVTVLDNPASFL PFQFEISYECL ALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPP KVLID+VQRNIL DKPRVTKFPINFHPENNENEE+ PPSE   ETG   +AV D DPP+E DS
Sbjct:    1 MSAVNITNVTVLDNPASFLTPFQFEISYECLTALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPPKVLIDRVQRNILSDKPRVTKFPINFHPENNENEEQLPPSEHPSETGEDPLAVVDRDPPDEKDS 191
[Close]
BLAST of rna-XM_004500659.3 vs. UniProtKB/TrEMBL
Match: tr|I1K6X2|I1K6X2_SOYBN (Histone chaperone ASF1A OS=Glycine max OX=3847 GN=100305970 PE=3 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 1.350e-119
Identity = 174/192 (90.62%), Postives = 178/192 (92.71%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINFHPENNENEE-KPPPSEQQPETGNGQVAVADCDPPNEGDS 191
            MSAVNITNVTVLDNPASFL PFQFEISYECL ALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPP KVLID+VQRNIL DKPRVTKFPINFHPENNENEE +PPPSE   ETG   +AV D DPP+E DS
Sbjct:    1 MSAVNITNVTVLDNPASFLTPFQFEISYECLTALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPPKVLIDRVQRNILSDKPRVTKFPINFHPENNENEEQQPPPSEHPSETGEDPLAVVDRDPPDEKDS 192
[Close]
BLAST of rna-XM_004500659.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445K2S2|A0A445K2S2_GLYSO (Histone chaperone ASF1B isoform A OS=Glycine soja OX=3848 GN=D0Y65_013325 PE=3 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 1.350e-119
Identity = 174/192 (90.62%), Postives = 178/192 (92.71%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINFHPENNENEE-KPPPSEQQPETGNGQVAVADCDPPNEGDS 191
            MSAVNITNVTVLDNPASFL PFQFEISYECL ALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPP KVLID+VQRNIL DKPRVTKFPINFHPENNENEE +PPPSE   ETG   +AV D DPP+E DS
Sbjct:    1 MSAVNITNVTVLDNPASFLTPFQFEISYECLTALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPPKVLIDRVQRNILSDKPRVTKFPINFHPENNENEEQQPPPSEHPSETGEDPLAVVDRDPPDEKDS 192
[Close]
BLAST of rna-XM_004500659.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3R9X2|A0A0S3R9X2_PHAAN (Histone chaperone ASF1A OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G002200 PE=3 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 2.490e-119
Identity = 171/191 (89.53%), Postives = 176/191 (92.15%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINFHPENNENEEKPPPSEQQPETGNGQVAVADCDPPNEGDS 191
            MSAVNITNVTVLDNPASFL PFQFEISYECL ALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPP KVLID+VQRNIL DKPRVTKFPINFHPENNENEE+PPPSE   ETG   +A+ D DP +  DS
Sbjct:    1 MSAVNITNVTVLDNPASFLTPFQFEISYECLTALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPPKVLIDRVQRNILSDKPRVTKFPINFHPENNENEEQPPPSEHPSETGEDPLALVDRDPADRKDS 191
[Close]
BLAST of rna-XM_004500659.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UI57|A0A0L9UI57_PHAAN (Histone chaperone ASF1A OS=Phaseolus angularis OX=3914 GN=LR48_Vigan04g257400 PE=3 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 5.807e-119
Identity = 171/191 (89.53%), Postives = 176/191 (92.15%), Query Frame = 0 
Query:    1 MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFPINFHPENNENEEKPPPSEQQPETGNGQVAVADCDPPNEGDS 191
            MSAVNITNVTVLDNPASFL PFQFEISYECL ALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPP KVLID+VQRNIL DKPRVTKFPINFHPENNENEE+PPPSE   ETG   +A+ D DP +  DS
Sbjct:   51 MSAVNITNVTVLDNPASFLTPFQFEISYECLTALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPPKVLIDRVQRNILSDKPRVTKFPINFHPENNENEEQPPPSEHPSETGEDPLALVDRDPADRKDS 241
The following BLAST results are available for this feature:
BLAST of rna-XM_004500659.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
|1.510e-10486.98Symbols: SGA1, ASF1B, SGA01 | anti- silencing func... [more]
|1.291e-10379.78Symbols: SP7, AtSP7, ASF1A, SGA2 | ANTI- SILENCING... [more]
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BLAST of rna-XM_004500659.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q9LS09|ASF1B_ARATH1.439e-10386.98Histone chaperone ASF1B OS=Arabidopsis thaliana OX... [more]
sp|Q9C9M6|ASF1A_ARATH1.230e-10279.78Probable histone chaperone ASF1A OS=Arabidopsis th... [more]
sp|Q9V464|ASF1_DROME1.427e-7165.36Histone chaperone asf1 OS=Drosophila melanogaster ... [more]
sp|Q69DB9|AS1AA_XENLA7.725e-6660.12Histone chaperone asf1a-A OS=Xenopus laevis OX=835... [more]
sp|Q3C1E9|ASF1_CHICK1.375e-6557.56Histone chaperone ASF1 OS=Gallus gallus OX=9031 GN... [more]
sp|Q9Y294|ASF1A_HUMAN1.375e-6557.56Histone chaperone ASF1A OS=Homo sapiens OX=9606 GN... [more]
sp|Q2KIG1|ASF1A_BOVIN1.692e-6561.44Histone chaperone ASF1A OS=Bos taurus OX=9913 GN=A... [more]
sp|Q9DAP7|ASF1B_MOUSE1.694e-6562.75Histone chaperone ASF1B OS=Mus musculus OX=10090 G... [more]
sp|Q6DIP1|ASF1B_XENTR3.127e-6562.75Histone chaperone asf1b OS=Xenopus tropicalis OX=8... [more]
sp|Q7T0M6|AS1AB_XENLA3.806e-6562.75Histone chaperone asf1a-B OS=Xenopus laevis OX=835... [more]
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BLAST of rna-XM_004500659.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2Y8W5|A0A1S2Y8W5_CICAR1.110e-138100.00Histone chaperone ASF1B-like OS=Cicer arietinum OX... [more]
tr|G7J8L0|G7J8L0_MEDTR8.897e-12391.71Histone chaperone ASF1B-like protein OS=Medicago t... [more]
tr|A0A2Z6NUF1|A0A2Z6NUF1_TRISU6.195e-12291.62Histone chaperone ASF1A OS=Trifolium subterraneum ... [more]
tr|B7FJE1|B7FJE1_MEDTR1.646e-12191.19Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|I1JSC8|I1JSC8_SOYBN4.498e-12090.58Histone chaperone ASF1B OS=Glycine max OX=3847 GN=... [more]
tr|A0A445KU08|A0A445KU08_GLYSO4.498e-12090.58Histone chaperone ASF1B isoform A OS=Glycine soja ... [more]
tr|I1K6X2|I1K6X2_SOYBN1.350e-11990.63Histone chaperone ASF1A OS=Glycine max OX=3847 GN=... [more]
tr|A0A445K2S2|A0A445K2S2_GLYSO1.350e-11990.63Histone chaperone ASF1B isoform A OS=Glycine soja ... [more]
tr|A0A0S3R9X2|A0A0S3R9X2_PHAAN2.490e-11989.53Histone chaperone ASF1A OS=Vigna angularis var. an... [more]
tr|A0A0L9UI57|A0A0L9UI57_PHAAN5.807e-11989.53Histone chaperone ASF1A OS=Phaseolus angularis OX=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:2.60.40.1490:FF:000001coord: 1..157
e-value: 3.4E-79
score: 266.1
IPR006818Histone chaperone ASF1-likePFAMPF04729ASF1_hist_chapcoord: 1..153
e-value: 1.1E-68
score: 241.4
IPR006818Histone chaperone ASF1-likePANTHERPTHR12040ANTI-SILENCING PROTEIN 1coord: 1..171
IPR036747Histone chaperone ASF1-like superfamilyGENE3D2.60.40.1490coord: 1..157
e-value: 4.4E-76
score: 256.0
IPR036747Histone chaperone ASF1-like superfamilySUPERFAMILY101546ASF1-likecoord: 1..153

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_004500659.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004500659.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004500659.3; organism=Cicer arietinum; type=mRNA; length=585bp
ATGAGTGCGGTGAACATCACCAACGTGACAGTCCTCGATAACCCTGCTTC
ATTTCTCAAACCTTTTCAGTTCGAGATTTCCTACGAGTGTTTGGCCGCTC
TCAAAGACGATTTGGAATGGAAGCTCATTTATGTTGGATCTGCTGAGGAT
GAGACTTATGACCAATTATTAGAGAGTGTTCTTGTTGGTCCTGTCAATGT
TGGAAACTACCGCTTTGTTTTACAGGCAGATCCACCGGACCCGTCAAAGA
TTCGTGAAGAAGATATCATTGGTGTTACGGTGCTTCTACTGACCTGCTCT
TATTTGGGTCAAGAGTTTATTCGCGTTGGTTATTATGTCAACAATGACTA
TGATGATGAGCAGCTGAGAGAGGAACCTCCAACAAAGGTTTTAATTGATA
AGGTTCAAAGGAATATTTTATGTGATAAACCAAGGGTCACAAAGTTTCCC
ATCAATTTTCACCCTGAGAACAATGAAAATGAAGAGAAACCCCCTCCATC
TGAGCAACAACCAGAAACTGGAAATGGTCAAGTGGCTGTAGCTGATTGTG
ATCCCCCAAATGAGGGGGATTCTAACATTTTGTAG
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protein sequence of rna-XM_004500659.3_CaCDCfrontier-NCBI_v1

>rna-XM_004500659.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004500659.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004500659.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=194bp
MSAVNITNVTVLDNPASFLKPFQFEISYECLAALKDDLEWKLIYVGSAED
ETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCS
YLGQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILCDKPRVTKFP
INFHPENNENEEKPPPSEQQPETGNGQVAVADCDPPNEGDSNIL
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mRNA from alignment at chr5:30238041..30240004-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_004500659.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004500659.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004500659.3; organism=Cicer arietinum; type=mRNA; length=1964bp; location=Sequence derived from: chr5:30238041..30240004- (Cicer arietinum
AGGAGAGTGGGGTTGGTTTGTTTGTCTGTGTGTGCAATTGTTGTAATAAA
TGATAAATCGTGTGGACTATGACTTGTGATTTCTTTCTTTTTATTTCTTC
AAAACCTCACTCACTCCCGCCAACACCTTTCATTGCCCTCGCTTCTCGTC
CTTCATTTGAACACTCACTCACTCTATAATAATAATTGTTTTTCTCGTCT
CCTCAATTTCTTGTGTGTTTGGAAGATTCGAGAAGCAGCTGCAGCAACAT
GAGTGCGGTGAACATCACCAACGTGACAGTCCTCGATAACCCTGCTTCAT
TTCTCAAACCTTTTCAGTTCGAGATTTCCTACGAGTGTTTGGCCGCTCTC
AAAGACGGTACATCTTCTTTCTTATTATCGTGTTTTTCTCTATTATTAGG
GTTTTTCTTCCCATTCTTTCATTTAACCCTTTCTATCATATCTTGCTAAC
CTAATTCAACTATTTTTAAATATAGATTTACCATAACACGCCATTTTTCG
TTCAATCTTCAATTTCATCATCACTCCAGTAGACAGGTTTAGGGTTTTTA
TTTTCAGATCTTGTTGCTGCAAATTAGACCTAATTTTGCATACGTAGCTT
TTCTTACTGCAGGATTATCACGAATCTTTTACTTCCTTGCTTGTACAAAA
TGGAGAATCTCTTCATTCTCTTTAGCAAGTTAAACCCGTAGCTTGTTGAA
CTCTCGATTTTCCCTCAACGTTCCTCATTCGATTTAATTACCAATTGTTT
GCTTGATCATACTACAGATGGGTGCTTCTGTACTGCTTTCTTTTCTTTCT
TTTTCATTGTATTGAATTTATGGGGGAGGGTGAATTTGTAGTCAAGGTAT
ACAATGCTGAACTAACCTGGGTCCATTCTATATTTTTGAATTGTTAAATC
TGTATATAAACTATTGCAAGTTGACAATTCTAACAAATGGCAAGATGAAT
TCATTTTTCTCTTTCTGAAATGTTCAATACATTGATTGATATATGAAATC
GATTAACAAATACCTTTTGTCAGGAGACAAACATGTCAGGTTTGGGTCTA
AAGTCGACAAAATCTATTTTTCTATCAGCTTCATTATACTTTCACTCCTA
GATTCTACTTTATCTTGTTTGGTTGCGACAACACATGCTGTTTTGTTGGC
ACAGATTTGGAATGGAAGCTCATTTATGTTGGATCTGCTGAGGATGAGAC
TTATGACCAATTATTAGAGAGTGTTCTTGTTGGTCCTGTCAATGTTGGAA
ACTACCGCTTTGTTTTACAGGCAAGCTTTATCAATACTAATCTTTTGAAT
TTTGTGTTGCCAATTGAAGTTTCTTTTAAATTCATACATATCTATACTGT
TTTGATGGCAGGCAGATCCACCGGACCCGTCAAAGATTCGTGAAGAAGAT
ATCATTGGTGTTACGGTGCTTCTACTGACCTGCTCTTATTTGGGTCAAGA
GTTTATTCGCGTTGGTTATTATGTCAACAATGACTATGATGATGAGCAGC
TGAGAGAGGAACCTCCAACAAAGGTTTTAATTGATAAGGTTCAAAGGAAT
ATTTTATGTGATAAACCAAGGGTCACAAAGTTTCCCATCAATTTTCACCC
TGAGAACAATGAAAATGAAGAGAAACCCCCTCCATCTGAGCAACAACCAG
AAACTGGAAATGGTCAAGTGGCTGTAGCTGATTGTGATCCCCCAAATGAG
GGGGATTCTAACATTTTGTAGGTATACAGGCCTTTCAACTCTCCAATGTC
CAACTTTACATTGCCTGTACGGATTAAGATGCTTTTTGTGAATCTCTTAT
GGATGAAGTTGATGATATGACTCATGAATACTTTTGGAAGTAGGAAGAGC
CTTTGAATTACTAGGTTCAAGATGTTTGTAATGTGTGAAAACCAGTTTCT
ATCCACAAAGCTTTGCAATACAAATCCAATTTCATTAGTTCTTGCGTTTC
ACATAATGAGCAAA
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Coding sequence (CDS) from alignment at chr5:30238041..30240004-

>rna-XM_004500659.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004500659.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004500659.3; organism=Cicer arietinum; type=CDS; length=585bp; location=Sequence derived from: chr5:30238041..30240004- (Cicer arietinum
ATGAGTGCGGTGAACATCACCAACGTGACAGTCCTCGATAACCCTGCTTC
ATTTCTCAAACCTTTTCAGTTCGAGATTTCCTACGAGTGTTTGGCCGCTC
TCAAAGACGATTTGGAATGGAAGCTCATTTATGTTGGATCTGCTGAGGAT
GAGACTTATGACCAATTATTAGAGAGTGTTCTTGTTGGTCCTGTCAATGT
TGGAAACTACCGCTTTGTTTTACAGGCAGATCCACCGGACCCGTCAAAGA
TTCGTGAAGAAGATATCATTGGTGTTACGGTGCTTCTACTGACCTGCTCT
TATTTGGGTCAAGAGTTTATTCGCGTTGGTTATTATGTCAACAATGACTA
TGATGATGAGCAGCTGAGAGAGGAACCTCCAACAAAGGTTTTAATTGATA
AGGTTCAAAGGAATATTTTATGTGATAAACCAAGGGTCACAAAGTTTCCC
ATCAATTTTCACCCTGAGAACAATGAAAATGAAGAGAAACCCCCTCCATC
TGAGCAACAACCAGAAACTGGAAATGGTCAAGTGGCTGTAGCTGATTGTG
ATCCCCCAAATGAGGGGGATTCTAACATTTTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR006818ASF1-like
IPR036747ASF1-like_sf
Vocabulary: Biological Process
TermDefinition
GO:0006325chromatin organization
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus