rna-XM_004505137.3

Transcript Overview
Namerna-XM_004505137.3
Unique Namerna-XM_004505137.3_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length744
Productzinc finger protein ZOP1, transcript variant X2
References
External references for this mRNA
DatabaseAccession
GeneID101493233
GenBankXM_004505137.3
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr6chromosomechr6:18102655..18106937 +Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascanL202Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascanL204Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cacanL202Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0439Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cacanL252Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0485Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0487Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascanL627Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascanL628Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cacanL315Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cacanL344Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0727Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0892Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cancanL166Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cancanR188Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cancanR194Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanL0713Cicer arietinum ICC 4958 genome v2Cicer arietinum
caicanL0969Cicer arietinum ICC 4958 genome v2Cicer arietinum
canccR0727Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR591Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canccR0919Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR637Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canvrvR472Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canvrvR473Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR388Vicia faba cv. Tiffany genome v1.0Vicia faba
canvfhR406Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvrvR519Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR431Vicia faba cv. Tiffany genome v1.0Vicia faba
canvrvR524Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canvrvR535Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canvrvR537Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR453Vicia faba cv. Tiffany genome v1.0Vicia faba
canvfhR450Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cantifR468Vicia faba cv. Tiffany genome v1.0Vicia faba
canvfhR471Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvfhR486Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canpvR571Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canpvR575Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canpvR581Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canpvR586Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canpvR635Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvssR529Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR553Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR581Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR587Vicia sativa cv. Studenica genome v1.0Vicia sativa
canzwsR367Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canzwsR388Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR424Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuaR427Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canzwsR410Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canzwsR417Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR441Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR460Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuaR444Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR462Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuR467Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuR472Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuaR489Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR531Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canpsR469Pisum sativum Cameor genome v1aPisum sativum
canpsR503Pisum sativum Cameor genome v1aPisum sativum
canpsR509Pisum sativum Cameor genome v1aPisum sativum
canpsR512Pisum sativum Cameor genome v1aPisum sativum
avjcanL244Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL249Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL519Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL630Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR409Cicer arietinum
cancarR416Cicer arietinum
cancarR443Cicer arietinum
cancarR450Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101493233gene-LOC101493233_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_004505137.3-1exon-XM_004505137.3-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004505137.3-2exon-XM_004505137.3-2_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004505137.3-3exon-XM_004505137.3-3_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004505137.3-4exon-XM_004505137.3-4_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004505137.3-5exon-XM_004505137.3-5_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_004505194.1cds-XP_004505194.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS
cds-XP_004505194.1cds-XP_004505194.1_CaCDCfrontier-NCBI_v1_2Cicer arietinumCDS
cds-XP_004505194.1cds-XP_004505194.1_CaCDCfrontier-NCBI_v1_3Cicer arietinumCDS
cds-XP_004505194.1cds-XP_004505194.1_CaCDCfrontier-NCBI_v1_4Cicer arietinumCDS
cds-XP_004505194.1cds-XP_004505194.1_CaCDCfrontier-NCBI_v1_5Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_004505137.3_CaCDCfrontier-NCBI_v1rna-XM_004505137.3_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_004505137.3_CaCDCfrontier-NCBI_v1rna-XM_004505137.3_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


Homology
[Close]
BLAST of rna-XM_004505137.3 vs. Araport11
Match: | (Symbols: ZOP1 | Zinc-finger and OCRE domain-containing Protein 1 | chr1:18354997-18356409 FORWARD LENGTH=242)

HSP 1 Score: 269.626 bits (688), Expect = 2.669e-91
Identity = 141/253 (55.73%), Postives = 183/253 (72.33%), Query Frame = 0 
Query:    1 MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKDKAKFEEARESH---ELDAQEWEFDSSSGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFASNAGRNVPSAKKGMTTSQSK-SVENKVNKHDNGPLPGPVVRASLNPMRNAKAAPSSLSVG--KRKRPNERSKVISEEEKEALKAREAARKRVEQREKPLLGLYSKPY 247
            MTEYWVSQGNKWC+FCKI+I NNP+SIRNH+LG+RH++ V K+L  MR+ +AAK+KE K+    L+QIEA+A RSYQKD A  ++  +++   E    +W  DS+SGYYY++TNG  YD +SGFYYSD+IG WVT DEAYA+    +++G  VP  KK +++S +  SV         G  PG +V ASLNP R  K A SS+ +G  KRKR +E+ K +S EEK ALKAREAARKRVE REKPLLGLY++P+
Sbjct:    1 MTEYWVSQGNKWCEFCKIWIQNNPTSIRNHDLGKRHRECVDKKLTDMRERSAAKDKELKKNEKLLQQIEAKATRSYQKDIATAQQVAKANGAPEDGTSDWMLDSASGYYYNQTNGLHYDSQSGFYYSDSIGHWVTQDEAYAA--VKTSSGTKVPLVKKPVSSSGAGPSV---------GKPPGRLVTASLNPKRAVKGAASSVDLGNNKRKRQDEKPKKVSAEEKAALKAREAARKRVEDREKPLLGLYNRPF 242
[Close]
BLAST of rna-XM_004505137.3 vs. Araport11
Match: | (Symbols: ZOP1 | Zinc-finger and OCRE domain-containing Protein 1 | chr1:18354997-18355509 FORWARD LENGTH=104)

HSP 1 Score: 121.709 bits (304), Expect = 3.788e-35
Identity = 54/86 (62.79%), Postives = 70/86 (81.40%), Query Frame = 0 
Query:    1 MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKDKAKFEEA 86
            MTEYWVSQGNKWC+FCKI+I NNP+SIRNH+LG+RH++ V K+L  MR+ +AAK+KE K+    L+QIEA+A RSYQKD A  ++ 
Sbjct:    1 MTEYWVSQGNKWCEFCKIWIQNNPTSIRNHDLGKRHRECVDKKLTDMRERSAAKDKELKKNEKLLQQIEAKATRSYQKDIATAQQV 86
[Close]
BLAST of rna-XM_004505137.3 vs. Araport11
Match: | (Symbols: ZOP1 | Zinc-finger and OCRE domain-containing Protein 1 | chr1:18354997-18355975 FORWARD LENGTH=146)

HSP 1 Score: 122.479 bits (306), Expect = 7.394e-35
Identity = 54/86 (62.79%), Postives = 70/86 (81.40%), Query Frame = 0 
Query:    1 MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKDKAKFEEA 86
            MTEYWVSQGNKWC+FCKI+I NNP+SIRNH+LG+RH++ V K+L  MR+ +AAK+KE K+    L+QIEA+A RSYQKD A  ++ 
Sbjct:    1 MTEYWVSQGNKWCEFCKIWIQNNPTSIRNHDLGKRHRECVDKKLTDMRERSAAKDKELKKNEKLLQQIEAKATRSYQKDIATAQQV 86
[Close]
BLAST of rna-XM_004505137.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q7XA66|ZOP1_ARATH (Zinc finger protein ZOP1 OS=Arabidopsis thaliana OX=3702 GN=ZOP1 PE=1 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 2.546e-90
Identity = 141/253 (55.73%), Postives = 183/253 (72.33%), Query Frame = 0 
Query:    1 MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKDKAKFEEARESH---ELDAQEWEFDSSSGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFASNAGRNVPSAKKGMTTSQSK-SVENKVNKHDNGPLPGPVVRASLNPMRNAKAAPSSLSVG--KRKRPNERSKVISEEEKEALKAREAARKRVEQREKPLLGLYSKPY 247
            MTEYWVSQGNKWC+FCKI+I NNP+SIRNH+LG+RH++ V K+L  MR+ +AAK+KE K+    L+QIEA+A RSYQKD A  ++  +++   E    +W  DS+SGYYY++TNG  YD +SGFYYSD+IG WVT DEAYA+    +++G  VP  KK +++S +  SV         G  PG +V ASLNP R  K A SS+ +G  KRKR +E+ K +S EEK ALKAREAARKRVE REKPLLGLY++P+
Sbjct:    1 MTEYWVSQGNKWCEFCKIWIQNNPTSIRNHDLGKRHRECVDKKLTDMRERSAAKDKELKKNEKLLQQIEAKATRSYQKDIATAQQVAKANGAPEDGTSDWMLDSASGYYYNQTNGLHYDSQSGFYYSDSIGHWVTQDEAYAA--VKTSSGTKVPLVKKPVSSSGAGPSV---------GKPPGRLVTASLNPKRAVKGAASSVDLGNNKRKRQDEKPKKVSAEEKAALKAREAARKRVEDREKPLLGLYNRPF 242
[Close]
BLAST of rna-XM_004505137.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q5F457|WBP4_CHICK (WW domain-binding protein 4 OS=Gallus gallus OX=9031 GN=WBP4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.059e-12
Identity = 33/79 (41.77%), Postives = 52/79 (65.82%), Query Frame = 0 
Query:    1 MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKD 79
            M +YW SQ  K+CD+CK +I++N  SI  HE G+ HK+NV KR++ +RK++  K KE +  +     +E  A ++YQ+D
Sbjct:    1 MADYWKSQPKKFCDYCKCWIADNRPSIDFHERGKNHKENVAKRISEIRKKSMEKAKEEENMSKEFAAMEEAAMKAYQED 79
[Close]
BLAST of rna-XM_004505137.3 vs. UniProtKB/Swiss-Prot
Match: sp|O75554|WBP4_HUMAN (WW domain-binding protein 4 OS=Homo sapiens OX=9606 GN=WBP4 PE=1 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 6.105e-11
Identity = 31/79 (39.24%), Postives = 54/79 (68.35%), Query Frame = 0 
Query:    1 MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKD 79
            M +YW SQ  K+CD+CK +I++N  S+  HE G+ HK+NV KR++ +++++  K KE ++ +     +EA A ++YQ+D
Sbjct:    1 MADYWKSQPKKFCDYCKCWIADNRPSVEFHERGKNHKENVAKRISEIKQKSLDKAKEEEKASKEFAAMEAAALKAYQED 79
[Close]
BLAST of rna-XM_004505137.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q61048|WBP4_MOUSE (WW domain-binding protein 4 OS=Mus musculus OX=10090 GN=Wbp4 PE=1 SV=4)

HSP 1 Score: 64.3142 bits (155), Expect = 1.180e-10
Identity = 30/79 (37.97%), Postives = 54/79 (68.35%), Query Frame = 0 
Query:    1 MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKD 79
            M +YW SQ  K+CD+CK +I++N  S+  HE G+ HK+NV +R++ +++++  K KE ++ +     +EA A ++YQ+D
Sbjct:    1 MADYWKSQPKKFCDYCKCWIADNRPSVEFHERGKNHKENVARRISEIKQKSLDKAKEEEKASKEFAAMEAAALKAYQED 79
[Close]
BLAST of rna-XM_004505137.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q5HZF2|WBP4_RAT (WW domain-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Wbp4 PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 4.330e-10
Identity = 29/79 (36.71%), Postives = 54/79 (68.35%), Query Frame = 0 
Query:    1 MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKD 79
            M +YW SQ  K+CD+CK +I++N  S+  HE G+ HK+NV ++++ +++++  K KE ++ +     +EA A ++YQ+D
Sbjct:    1 MADYWKSQPKKFCDYCKCWIADNRPSVEFHERGKNHKENVARKISEIKQKSLDKAKEEEKASKEFAAMEAAALKAYQED 79
[Close]
BLAST of rna-XM_004505137.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YIX5|A0A1S2YIX5_CICAR (Zinc finger protein ZOP1 isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101493233 PE=4 SV=1)

HSP 1 Score: 514.998 bits (1325), Expect = 0.000e+0
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0 
Query:    1 MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKDKAKFEEARESHELDAQEWEFDSSSGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFASNAGRNVPSAKKGMTTSQSKSVENKVNKHDNGPLPGPVVRASLNPMRNAKAAPSSLSVGKRKRPNERSKVISEEEKEALKAREAARKRVEQREKPLLGLYSKPY 247
            MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKDKAKFEEARESHELDAQEWEFDSSSGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFASNAGRNVPSAKKGMTTSQSKSVENKVNKHDNGPLPGPVVRASLNPMRNAKAAPSSLSVGKRKRPNERSKVISEEEKEALKAREAARKRVEQREKPLLGLYSKPY
Sbjct:    1 MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKDKAKFEEARESHELDAQEWEFDSSSGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFASNAGRNVPSAKKGMTTSQSKSVENKVNKHDNGPLPGPVVRASLNPMRNAKAAPSSLSVGKRKRPNERSKVISEEEKEALKAREAARKRVEQREKPLLGLYSKPY 247
[Close]
BLAST of rna-XM_004505137.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YI91|A0A1S2YI91_CICAR (Zinc finger protein ZOP1 isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101493233 PE=4 SV=1)

HSP 1 Score: 510.375 bits (1313), Expect = 0.000e+0
Identity = 247/248 (99.60%), Postives = 247/248 (99.60%), Query Frame = 0 
Query:    1 MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKDKAKFEEARESHELDAQ-EWEFDSSSGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFASNAGRNVPSAKKGMTTSQSKSVENKVNKHDNGPLPGPVVRASLNPMRNAKAAPSSLSVGKRKRPNERSKVISEEEKEALKAREAARKRVEQREKPLLGLYSKPY 247
            MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKDKAKFEEARESHELDAQ EWEFDSSSGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFASNAGRNVPSAKKGMTTSQSKSVENKVNKHDNGPLPGPVVRASLNPMRNAKAAPSSLSVGKRKRPNERSKVISEEEKEALKAREAARKRVEQREKPLLGLYSKPY
Sbjct:    1 MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKDKAKFEEARESHELDAQGEWEFDSSSGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFASNAGRNVPSAKKGMTTSQSKSVENKVNKHDNGPLPGPVVRASLNPMRNAKAAPSSLSVGKRKRPNERSKVISEEEKEALKAREAARKRVEQREKPLLGLYSKPY 248
[Close]
BLAST of rna-XM_004505137.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4ZY91|A0A9D4ZY91_PEA (Matrin-type domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_073165 PE=4 SV=1)

HSP 1 Score: 442.58 bits (1137), Expect = 7.290e-156
Identity = 218/251 (86.85%), Postives = 233/251 (92.83%), Query Frame = 0 
Query:    1 MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKDKAKFEEARESHELDAQEWEFDSSSGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFASNAGRNVPSAKKGMT----TSQSKSVENKVNKHDNGPLPGPVVRASLNPMRNAKAAPSSLSVGKRKRPNERSKVISEEEKEALKAREAARKRVEQREKPLLGLYSKPY 247
            MTEYWVSQGNKWCD CKI+ISNNPSSIRNHELGQRHKDNVTKRLATMRK+N AKEKEHKETANALE+IEARAQ SYQKDKAKFEEARESHELDAQEWEFDS+SGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFA N+GRN+PS KKG T     SQSKSVE K NKH +G LPGPV+R  +NPMR+ KAAPSSL+VGKRKRPNE+SKV+S+EEKEALKAREAARKRVEQREKPLLGLY+KPY
Sbjct:    1 MTEYWVSQGNKWCDVCKIFISNNPSSIRNHELGQRHKDNVTKRLATMRKDNVAKEKEHKETANALEKIEARAQLSYQKDKAKFEEARESHELDAQEWEFDSASGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFALNSGRNIPSGKKGSTPSQSKSQSKSVETKPNKHLDGLLPGPVLR--VNPMRSVKAAPSSLAVGKRKRPNEKSKVVSQEEKEALKAREAARKRVEQREKPLLGLYNKPY 249
[Close]
BLAST of rna-XM_004505137.3 vs. UniProtKB/TrEMBL
Match: tr|I1L9Z6|I1L9Z6_SOYBN (Matrin-type domain-containing protein OS=Glycine max OX=3847 GN=100776500 PE=4 SV=1)

HSP 1 Score: 433.335 bits (1113), Expect = 3.081e-152
Identity = 207/247 (83.81%), Postives = 222/247 (89.88%), Query Frame = 0 
Query:    1 MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKDKAKFEEARESHELDAQEWEFDSSSGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFASNAGRNVPSAKKGMTTSQSKSVENKVNKHDNGPLPGPVVRASLNPMRNAKAAPSSLSVGKRKRPNERSKVISEEEKEALKAREAARKRVEQREKPLLGLYSKPY 247
            MTEYWVSQGNKWCDFCKIYISNNP SIRNHELGQRHKDNV+KRLA MRKEN AKEKE KETA A+EQIEA+AQRSYQKDK KFEE RESHELD QEWEFDSS+GYYYHKTNGF YDQKSGFYYSDAIGKWVT +EAYASPHF SNAG N P+AKK ++TSQSKS ENK NK +NG  PGPVV  SLNP RN KAAPSSL+VGKRKRP E+SKVIS+EEK ALKAREAARKRV++REKPLLGLY+KPY
Sbjct:    1 MTEYWVSQGNKWCDFCKIYISNNPGSIRNHELGQRHKDNVSKRLAAMRKENIAKEKEQKETARAIEQIEAKAQRSYQKDKVKFEETRESHELDDQEWEFDSSTGYYYHKTNGFYYDQKSGFYYSDAIGKWVTQEEAYASPHFTSNAGHNGPTAKKSLSTSQSKSDENKGNKFNNGSSPGPVVTTSLNPKRNVKAAPSSLAVGKRKRPGEKSKVISDEEKAALKAREAARKRVQEREKPLLGLYNKPY 247
[Close]
BLAST of rna-XM_004505137.3 vs. UniProtKB/TrEMBL
Match: tr|A0A371GP94|A0A371GP94_MUCPR (Zinc finger protein ZOP1 (Fragment) OS=Mucuna pruriens OX=157652 GN=ZOP1 PE=4 SV=1)

HSP 1 Score: 431.795 bits (1109), Expect = 9.473e-152
Identity = 209/245 (85.31%), Postives = 221/245 (90.20%), Query Frame = 0 
Query:    3 EYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKDKAKFEEARESHELDAQEWEFDSSSGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFASNAGRNVPSAKKGMTTSQSKSVENKVNKHDNGPLPGPVVRASLNPMRNAKAAPSSLSVGKRKRPNERSKVISEEEKEALKAREAARKRVEQREKPLLGLYSKPY 247
            +YWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNV KRLA MRKEN AKEKE KETA+ALEQIEA+AQRSYQKDKAKFEEARESHELDAQEWEFDSSSGYYYHKTNGF YD KSGFYYSDAIGKWV+ +EAYASPHF SNAG   PSA K ++TSQSKSVENK NK  NG  PGPVV ASLNP RN K APSSL+VGKRKRP+E+SKVISEEEK ALKAREAARKRV++REK LLGLYSKPY
Sbjct:    1 QYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVAKRLAAMRKENIAKEKEQKETAHALEQIEAKAQRSYQKDKAKFEEARESHELDAQEWEFDSSSGYYYHKTNGFYYDPKSGFYYSDAIGKWVSQEEAYASPHFTSNAGHKGPSANKSLSTSQSKSVENKANKFHNGSSPGPVVTASLNPKRNVKGAPSSLTVGKRKRPDEKSKVISEEEKTALKAREAARKRVQEREKSLLGLYSKPY 245
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BLAST of rna-XM_004505137.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445IL35|A0A445IL35_GLYSO (Zinc finger protein ZOP1 OS=Glycine soja OX=3848 GN=D0Y65_026720 PE=4 SV=1)

HSP 1 Score: 428.713 bits (1101), Expect = 2.292e-150
Identity = 205/247 (83.00%), Postives = 221/247 (89.47%), Query Frame = 0 
Query:    1 MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKDKAKFEEARESHELDAQEWEFDSSSGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFASNAGRNVPSAKKGMTTSQSKSVENKVNKHDNGPLPGPVVRASLNPMRNAKAAPSSLSVGKRKRPNERSKVISEEEKEALKAREAARKRVEQREKPLLGLYSKPY 247
            MTEYWVSQGNKWCDFCKIYISNNP SIRNHELGQRHKDNV+KRL+ MRKEN AKEKE KETA A+EQIEA+AQRSYQKDK KFEE RES ELD QEWEFDSS+GYYYHKTNGF YDQKSGFYYSDAIGKWVT +EAYASPHF SNAG N P+AKK ++TSQSKS ENK NK +NG  PGPVV  SLNP RN KAAPSSL+VGKRKRP E+SKVIS+EEK ALKAREAARKRV++REKPLLGLY+KPY
Sbjct:    1 MTEYWVSQGNKWCDFCKIYISNNPGSIRNHELGQRHKDNVSKRLSAMRKENIAKEKEQKETARAIEQIEAKAQRSYQKDKVKFEETRESLELDDQEWEFDSSTGYYYHKTNGFYYDQKSGFYYSDAIGKWVTQEEAYASPHFTSNAGHNGPTAKKSLSTSQSKSDENKGNKFNNGSSPGPVVTTSLNPKRNVKAAPSSLAVGKRKRPGEKSKVISDEEKAALKAREAARKRVQEREKPLLGLYNKPY 247
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BLAST of rna-XM_004505137.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4ZV79|A0A9D4ZV79_PEA (Matrin-type domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_073165 PE=4 SV=1)

HSP 1 Score: 437.958 bits (1125), Expect = 2.830e-150
Identity = 215/249 (86.35%), Postives = 231/249 (92.77%), Query Frame = 0 
Query:    3 EYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKDKAKFEEARESHELDAQEWEFDSSSGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFASNAGRNVPSAKKGMT----TSQSKSVENKVNKHDNGPLPGPVVRASLNPMRNAKAAPSSLSVGKRKRPNERSKVISEEEKEALKAREAARKRVEQREKPLLGLYSKPY 247
            +YWVSQGNKWCD CKI+ISNNPSSIRNHELGQRHKDNVTKRLATMRK+N AKEKEHKETANALE+IEARAQ SYQKDKAKFEEARESHELDAQEWEFDS+SGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFA N+GRN+PS KKG T     SQSKSVE K NKH +G LPGPV+R  +NPMR+ KAAPSSL+VGKRKRPNE+SKV+S+EEKEALKAREAARKRVEQREKPLLGLY+KPY
Sbjct:  254 QYWVSQGNKWCDVCKIFISNNPSSIRNHELGQRHKDNVTKRLATMRKDNVAKEKEHKETANALEKIEARAQLSYQKDKAKFEEARESHELDAQEWEFDSASGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFALNSGRNIPSGKKGSTPSQSKSQSKSVETKPNKHLDGLLPGPVLR--VNPMRSVKAAPSSLAVGKRKRPNEKSKVVSQEEKEALKAREAARKRVEQREKPLLGLYNKPY 500
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BLAST of rna-XM_004505137.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445M322|A0A445M322_GLYSO (Zinc finger protein ZOP1 (Fragment) OS=Glycine soja OX=3848 GN=D0Y65_001569 PE=4 SV=1)

HSP 1 Score: 426.787 bits (1096), Expect = 8.650e-150
Identity = 204/244 (83.61%), Postives = 219/244 (89.75%), Query Frame = 0 
Query:    4 YWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKDKAKFEEARESHELDAQEWEFDSSSGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFASNAGRNVPSAKKGMTTSQSKSVENKVNKHDNGPLPGPVVRASLNPMRNAKAAPSSLSVGKRKRPNERSKVISEEEKEALKAREAARKRVEQREKPLLGLYSKPY 247
            YWVSQGNKWCDFCKIYISNNP SIRNHELGQRHKDNV+KRLA MRKEN AKEKE KETA A+EQIEA+AQRSYQKDK KFEE RESHELD QEWEFDSS+GYYYHKTNGF YDQKSGFYYSDAIGKWVT +EAYASPHF SNAG N P+AKK ++TSQSKS ENK NK +NG  PGPVV  SLNP RN KAAPSSL+VGKRKRP E+SKVIS+EEK ALKAREAARKRV++REKPLLGLY+KPY
Sbjct:    1 YWVSQGNKWCDFCKIYISNNPGSIRNHELGQRHKDNVSKRLAAMRKENIAKEKEQKETARAIEQIEAKAQRSYQKDKVKFEETRESHELDDQEWEFDSSTGYYYHKTNGFYYDQKSGFYYSDAIGKWVTQEEAYASPHFTSNAGHNGPTAKKSLSTSQSKSDENKGNKFNNGSSPGPVVTTSLNPKRNVKAAPSSLAVGKRKRPGEKSKVISDEEKAALKAREAARKRVQEREKPLLGLYNKPY 244
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BLAST of rna-XM_004505137.3 vs. UniProtKB/TrEMBL
Match: tr|V7BKH5|V7BKH5_PHAVU (Matrin-type domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G247000g PE=4 SV=1)

HSP 1 Score: 424.861 bits (1091), Expect = 6.423e-149
Identity = 206/247 (83.40%), Postives = 218/247 (88.26%), Query Frame = 0 
Query:    1 MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKDKAKFEEARESHELDAQEWEFDSSSGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFASNAGRNVPSAKKGMTTSQSKSVENKVNKHDNGPLPGPVVRASLNPMRNAKAAPSSLSVGKRKRPNERSKVISEEEKEALKAREAARKRVEQREKPLLGLYSKPY 247
            MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNV KRLA MRKEN AKEKE KETA A+EQIEA+AQRSYQKDKAKFEEARES ELDAQEWEFDSSSGYYYHKTNGFC D KSGFYYSDAIGKWVT +EAY SPHF S A  + P++KK + TSQSKS ENK NK  NG   GPVV  SLNP RN KAAPSSL+VGKRKRPNE+SK+ISEEEK ALKAREAARKRV++REKPLLGLYSKPY
Sbjct:    1 MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVAKRLAAMRKENIAKEKEQKETARAIEQIEAKAQRSYQKDKAKFEEARESLELDAQEWEFDSSSGYYYHKTNGFCNDPKSGFYYSDAIGKWVTKEEAYVSPHFKSKARHDGPTSKKSLLTSQSKSDENKSNKFQNGSSSGPVVTTSLNPKRNGKAAPSSLAVGKRKRPNEKSKIISEEEKAALKAREAARKRVQEREKPLLGLYSKPY 247
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BLAST of rna-XM_004505137.3 vs. UniProtKB/TrEMBL
Match: tr|A0A151S2B9|A0A151S2B9_CAJCA (WW domain-binding protein 4 OS=Cajanus cajan OX=3821 GN=KK1_029355 PE=4 SV=1)

HSP 1 Score: 420.624 bits (1080), Expect = 5.655e-147
Identity = 203/245 (82.86%), Postives = 217/245 (88.57%), Query Frame = 0 
Query:    3 EYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKENAAKEKEHKETANALEQIEARAQRSYQKDKAKFEEARESHELDAQEWEFDSSSGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFASNAGRNVPSAKKGMTTSQSKSVENKVNKHDNGPLPGPVVRASLNPMRNAKAAPSSLSVGKRKRPNERSKVISEEEKEALKAREAARKRVEQREKPLLGLYSKPY 247
            +YWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNV KRLA MRKEN AKEKE KETA A+EQIEA+AQRSYQKDKAKFEE RESHELD QEWEFDSSSGYY+HKTNGF YD KSGFYYSDAIGKWVT +EAYASPHF SNAG N  +AKK ++TSQSKS ENK N   NG  PGPVV  SLNP +N KAAPSSL+VGKRKRP E+SKVIS+EEK ALKAREAARKRV++REKPLLGLYSKPY
Sbjct:   23 QYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVAKRLAAMRKENIAKEKEQKETARAIEQIEAKAQRSYQKDKAKFEETRESHELDDQEWEFDSSSGYYFHKTNGFYYDPKSGFYYSDAIGKWVTQEEAYASPHFTSNAGNNGSTAKKSLSTSQSKSDENKANMFHNGSAPGPVVTTSLNPKKNTKAAPSSLAVGKRKRPVEKSKVISDEEKAALKAREAARKRVQEREKPLLGLYSKPY 267
The following BLAST results are available for this feature:
BLAST of rna-XM_004505137.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 3
Match NameE-valueIdentityDescription
|2.669e-9155.73Symbols: ZOP1 | Zinc-finger and OCRE domain-contai... [more]
|3.788e-3562.79Symbols: ZOP1 | Zinc-finger and OCRE domain-contai... [more]
|7.394e-3562.79Symbols: ZOP1 | Zinc-finger and OCRE domain-contai... [more]
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BLAST of rna-XM_004505137.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q7XA66|ZOP1_ARATH2.546e-9055.73Zinc finger protein ZOP1 OS=Arabidopsis thaliana O... [more]
sp|Q5F457|WBP4_CHICK7.059e-1241.77WW domain-binding protein 4 OS=Gallus gallus OX=90... [more]
sp|O75554|WBP4_HUMAN6.105e-1139.24WW domain-binding protein 4 OS=Homo sapiens OX=960... [more]
sp|Q61048|WBP4_MOUSE1.180e-1037.97WW domain-binding protein 4 OS=Mus musculus OX=100... [more]
sp|Q5HZF2|WBP4_RAT4.330e-1036.71WW domain-binding protein 4 OS=Rattus norvegicus O... [more]
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BLAST of rna-XM_004505137.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2YIX5|A0A1S2YIX5_CICAR0.000e+0100.00Zinc finger protein ZOP1 isoform X2 OS=Cicer ariet... [more]
tr|A0A1S2YI91|A0A1S2YI91_CICAR0.000e+099.60Zinc finger protein ZOP1 isoform X1 OS=Cicer ariet... [more]
tr|A0A9D4ZY91|A0A9D4ZY91_PEA7.290e-15686.85Matrin-type domain-containing protein OS=Pisum sat... [more]
tr|I1L9Z6|I1L9Z6_SOYBN3.081e-15283.81Matrin-type domain-containing protein OS=Glycine m... [more]
tr|A0A371GP94|A0A371GP94_MUCPR9.473e-15285.31Zinc finger protein ZOP1 (Fragment) OS=Mucuna prur... [more]
tr|A0A445IL35|A0A445IL35_GLYSO2.292e-15083.00Zinc finger protein ZOP1 OS=Glycine soja OX=3848 G... [more]
tr|A0A9D4ZV79|A0A9D4ZV79_PEA2.830e-15086.35Matrin-type domain-containing protein OS=Pisum sat... [more]
tr|A0A445M322|A0A445M322_GLYSO8.650e-15083.61Zinc finger protein ZOP1 (Fragment) OS=Glycine soj... [more]
tr|V7BKH5|V7BKH5_PHAVU6.423e-14983.40Matrin-type domain-containing protein OS=Phaseolus... [more]
tr|A0A151S2B9|A0A151S2B9_CAJCA5.655e-14782.86WW domain-binding protein 4 OS=Cajanus cajan OX=38... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041591OCRE domainPFAMPF17780OCREcoord: 93..144
e-value: 5.5E-13
score: 60.0
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 9..87
e-value: 5.7E-8
score: 34.7
IPR013085U1-C, C2H2-type zinc fingerPFAMPF06220zf-U1coord: 11..43
e-value: 3.3E-4
score: 31.7
IPR040023WW domain-binding protein 4PANTHERPTHR13173WW DOMAIN BINDING PROTEIN 4coord: 1..237
IPR000690Matrin/U1-C, C2H2-type zinc fingerPROSITEPS50171ZF_MATRINcoord: 11..42
score: 9.641857
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 12..54

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_004505137.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004505137.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004505137.3; organism=Cicer arietinum; type=mRNA; length=744bp
ATGACTGAGTATTGGGTCAGCCAGGGAAACAAATGGTGTGATTTCTGCAA
AATTTATATATCAAACAATCCATCCAGCATCAGAAATCATGAGCTTGGTC
AACGACACAAGGACAATGTTACCAAGCGGCTGGCTACTATGAGAAAAGAG
AATGCAGCTAAAGAGAAAGAACACAAGGAAACAGCCAATGCCCTTGAGCA
AATCGAAGCTAGAGCACAGCGGAGCTATCAAAAGGATAAGGCAAAATTTG
AGGAAGCCAGGGAATCACATGAATTGGATGCCCAAGAATGGGAGTTTGAC
AGCAGTTCAGGCTATTACTACCATAAAACAAATGGATTTTGCTATGATCA
AAAGTCAGGATTTTACTATTCCGATGCCATCGGCAAGTGGGTGACCCATG
ATGAAGCATATGCCTCACCTCACTTTGCATCAAATGCTGGGCGTAATGTA
CCATCTGCAAAAAAGGGCATGACAACTTCACAATCCAAATCAGTTGAAAA
CAAAGTAAATAAACATGATAATGGACCTTTACCTGGACCAGTTGTTAGAG
CTTCTTTGAATCCCATGAGAAATGCAAAAGCCGCCCCTTCATCTCTTTCT
GTTGGTAAGAGAAAGAGACCCAATGAAAGATCAAAGGTTATCTCGGAAGA
AGAAAAAGAAGCTCTCAAGGCAAGAGAGGCTGCAAGGAAAAGAGTAGAAC
AGAGGGAGAAACCCTTGCTTGGGCTTTACAGTAAGCCTTACTAA
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protein sequence of rna-XM_004505137.3_CaCDCfrontier-NCBI_v1

>rna-XM_004505137.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004505137.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004505137.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=247bp
MTEYWVSQGNKWCDFCKIYISNNPSSIRNHELGQRHKDNVTKRLATMRKE
NAAKEKEHKETANALEQIEARAQRSYQKDKAKFEEARESHELDAQEWEFD
SSSGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFASNAGRNV
PSAKKGMTTSQSKSVENKVNKHDNGPLPGPVVRASLNPMRNAKAAPSSLS
VGKRKRPNERSKVISEEEKEALKAREAARKRVEQREKPLLGLYSKPY
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mRNA from alignment at chr6:18102655..18106937+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_004505137.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004505137.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004505137.3; organism=Cicer arietinum; type=mRNA; length=4283bp; location=Sequence derived from: chr6:18102655..18106937+ (Cicer arietinum
ATGGAAAAAACAGGCCAGTGAAAAACGCCGGCCTCTATGTTTCTGAActt
agtgaagaaaaaaaaaagttctctATTGATCCTCCCGGAAAAAAAAACAC
GAAGAAAGAAGTGACGGAGCTTGGTCTGATTCCGGTTTTCTTTTGGGTAT
AAGGGTTTTGAAAATCGAAGAGAGTTTGGTTCATTTGACGGAATTATCTT
TCAGGCTTAGCTTCCTTCGTTCTTCCTTCCAACCCTAATTTCCTACCATG
ACTGAGGTTTGATCACCCCAATTTTTTCTCATGATTTCCATTATTATTGC
ATTATTTTATTCACTTTTCCTATTCCTCTAAAGAAATTATCACACTTCCT
TTTCTTTTACGTTCTGCTCCCttcataattgaaaaaaaatatagtttttt
ttaaaggtaGCTCTATCAtgatatatcaattttaataccTAATATCCAAG
TTAATGTTAAACGTTTTGACTTGTGGTTGATAGTTTAGATTCATTCTGTT
TGTTATAGCTATAAAGCACTGTCACAAACACAACACTGACACATAAGTAC
agttttgagaaaataaaagtgattgaatgtaaACACATGTTTTTGTGTTG
TGTGGTTGTTCAATACTTAGTGTATGTTTGATTATGTGgtgacaaaaatt
aattttacttaaaagtgagttgaatgtaaagtgTATTATGTTTGTATATA
TTTACTTAGTGAGTTAACCAATAAATTTTAGTGTATAAATcatgtttagg
ctcaaaagcaaCAAATCCTAGTTTTTAGTTAGAATCTATTACGGAGGCAA
AATCAATTCTACTTGAGAAACGATCAAACATGTCGAAATTAATTTTACAC
CTTCAAAATCAATTCTGACTACTCTAAACGTGGAACCAAACATAGACTTA
CACGTCTTGGACATCTAGCATGCCTTCATTTTGAAATGTCGGTGCTACAT
TGATGACATGTGCATGATAGTTTGGATGCATTGGGTCTTCATTaactatt
ttctttgtttttcagTATTGGGTCAGCCAGGGAAACAAATGGTGTGATTT
CtgcaaaatttatatatcaaacaaTCCATCCAGCATCAGAAATCATGAGC
TTGGTCAACGACACAAGGACAATGTTACCAAGCGGCTGGCTACTATGAGA
AAAGAGAATGCAGCTAAAGAGAAAGAACACAAGGAAACAGCCAATGCCCT
TGAGCAAATCGAAGCTGTAAGACTTTTCTTCTTATTCTGTGTTACTCATG
CTTGCTACCTTGCCTTctccttaattatttttttttcttcattcgAATGA
CTACTCCGgtttaaacattaaatttttCTGATAAAGGTGCATAGTTCTAT
TTCCATGTCCATACACCTTCTctcaaattttattgaaaaacttaTTAGAA
AAATCGAATGTGTTGTTGATCAATATTAGTAGAATAATAGCCTTTCTTAT
CTATTACATCCTTTTCATATCTAAACTAAGATATGGAACCCAACAATCTC
TGCCTTTGTCATCCAAGAGCTTTCTTTgatatattcaatttatttctcCA
CCATTATTCTGTGGAAAATCATTGTTTGATGTCCATGTCAAGAAGAACTT
CGACCTTACCTTGTACTGCAATTACTGCCATAACATTCTGACATGCTACT
GAACTTCCATCGTCAGATTGACTTTTTACACAAGGGGCCAATGGTGCAGT
GTAGATCATTCATCATGTGATTCCTTGATCCATTGCTTTTGTAACACTTG
ATGGTGGAATGTGACATCCCCGTCTACACATGTACTAGTAATCAGTAAAA
CAACACAGTTTGACATGGTTCTTTTGCCCTACATGCTTACATCCAAAGTC
TACTATTAACACAATATTACTATATAATGTTTGTGGGCACACCCAATCTT
GTCTATCCCACCTGAAGTACTCATGTTTTGTAGTTTTCTTTTCAACAGTG
CTAATGTCTTTGGCATCTTCAGCATCAATGGATTGCCTTCCCAATCATTT
TTCTGGTAGCCCGTACTCTATTTTTCTTTCTGAAAGACTCATTTGTAAAA
ATGTTGAAGCTTTGTAAATTTTAGCTTGAGGGAAAATGTTAGAATGTATA
GAAAGTATATCATATCATTATTGTATCTTAAAATACTATACAGTCTTAGT
TGATCTGTTAGTAGGATTTGTTGAGTTAGTGAGAGAACTAAATTGCCAAC
ATGAGTGAAATCTAATTGCCATGATTCCTGTGAGGATTTATATCCATGGT
GTGCTTTGATCAGATGTCATAAACAAACTATTTCAAAAGCATGAGCTATT
AAATGATGCACatgaatgattttatatttgacTAAGATCTTGGATTGCCA
AAGGGATTCTTCAATTAAAATGTTGATTCATTCAAAGATTGGGAAATGAA
CTGGAAGTAGCAGGAAGCTACCACTTTTGTTGATGTTAAACTCTTGGCAA
ATGCAGAATATAAACATTGCATAGATACTTGAtagtttttttatgttatt
tttagatttaCACACAAAAATGAGATGTATAACTTTTGATATATCCATTA
CTTTGTATTCTACTGCAGAGAGCACAGCGGAGCTATCAAAAGGATAAGGC
AAAATTTGAGGAAGCCAGGGAATCACATGAATTGGATGCCCAAGGTGGTA
AGTAATAAGTATGAACTttctttcattcatttattttgatagaGTTCTAA
TTAACTGTTAATTTGCATAGTCTTGGACATGTTTTGACATTCAAACTATG
TTTAGATCTAATAGGCTGATACTTTGAGGAATGAATTGGTGCCTTATACA
AAttacaaagaaaaaagaattttagtGACAACTCAATTAGGAGAGCCCAA
TTTCTGGAAACTACTCAACATTATATGGTCTTTCTTTAATTGAATATTAT
GCGGTCTTTCCAAGCAGATCTTCAAAATTCTTATGCCACACTTCTTTACT
AAGGTGACTAGGAATCATTGCATTCATTACGGAAGGTGTTAGGATTGATA
AAGTGGGGGCCCAGGGGTTGCCTTCTATAAGTGGATGTTCCAAATGAGCT
ACAACTTTGAAATTGTTTACCTTGCAAGCTGCAGTTAACACAGAATTATA
TATGTGAGTTATGGAAAACTATGTATTAAGGATTGGAAATTGTTGTGACC
TCTGAAGCATGGATACATGAAAATGGGGGCCGAATCGTACTTGACATGTA
CCGCATCACTGTATCGTGTCCTTGCTTCATAGGTTGTGACTAGTAATAAC
TTTGTGGTAGACTTAGGAGTTCGAGTATGTTGGACATAATTACTATTATC
CCAACCAAATTACCACCCTTTAAAGAGTGGCACTCTGGTGTTTTTGAGAA
ACTTGGGCAGCTTTTACTTGTTATCTAACTATCTGCATGATCTTTTCTGG
GCAGTTTAATGTGGTATACCCATGTAGCTTCATACTTTGGTTCATGGACA
CAAGCCCAGAACTCAAAAAGATGTGTTAGTGTATTTCATTACGTCTGTAT
TGGTTTTTCATCCTGATGTTGATTTTTGCTTCATGATTTGGCAGAATGGG
AGTTTGACAGCAGTTCAGGCTATTACTACCATAAAACAAATGGATTTTGC
TATGATCAAAAGTCAGGATTTTACTATTCCGATGCCATCGGTATGAGTGT
TATACTTCTCATTTACATGTATATATAGTACTAATATTATTGAGTTGATA
GCATATTTACTTAATGAAATTTCAACAGGCAAGTGGGTGACCCATGATGA
AGCATATGCCTCACCTCACTTTGCATCAAATGCTGGGCGTAATGTACCAT
CTGCAAAAAAGGGCATGACAACTTCACAATCCAAATCAGTTGAAAACAAA
GTAAATAAACATGATAATGGACCTTTACCTGGACCAGTTGTTAGAGCTTC
TTTGAATCCCATGAGAAATGCAAAAGCCGCCCCTTCATCTCTTTCTGTTG
GTAAGAGAAAGAGACCCAATGAAAGATCAAAGGTTATCtcggaagaagaa
aaagaagctCTCAAGGCAAGAGAGGCTGCAAGGAAAAGAGTAGAACAGAG
GGAGAAACCCTTGCTTGGGCTTTACAGTAAGCCTTACTAATGTGGAATAT
TTACTAACAGCCTTGTCTTTCCCCAAAAATTTGAGGGGTTATACTTGTTT
TTGCCTGGTTTGTTTATGGTGGCATTAACTGGGTCTAATTCCCAAGTGTT
TTATGTGACTGTACCATGTAAAATATATGTACCTGCTCCATTTTTTATGC
AATGCATGTTGAATTTCTGCAACATTTGTATAA
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Coding sequence (CDS) from alignment at chr6:18102655..18106937+

>rna-XM_004505137.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004505137.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004505137.3; organism=Cicer arietinum; type=CDS; length=744bp; location=Sequence derived from: chr6:18102655..18106937+ (Cicer arietinum
ATGACTGAGTATTGGGTCAGCCAGGGAAACAAATGGTGTGATTTCtgcaa
aatttatatatcaaacaaTCCATCCAGCATCAGAAATCATGAGCTTGGTC
AACGACACAAGGACAATGTTACCAAGCGGCTGGCTACTATGAGAAAAGAG
AATGCAGCTAAAGAGAAAGAACACAAGGAAACAGCCAATGCCCTTGAGCA
AATCGAAGCTAGAGCACAGCGGAGCTATCAAAAGGATAAGGCAAAATTTG
AGGAAGCCAGGGAATCACATGAATTGGATGCCCAAGAATGGGAGTTTGAC
AGCAGTTCAGGCTATTACTACCATAAAACAAATGGATTTTGCTATGATCA
AAAGTCAGGATTTTACTATTCCGATGCCATCGGCAAGTGGGTGACCCATG
ATGAAGCATATGCCTCACCTCACTTTGCATCAAATGCTGGGCGTAATGTA
CCATCTGCAAAAAAGGGCATGACAACTTCACAATCCAAATCAGTTGAAAA
CAAAGTAAATAAACATGATAATGGACCTTTACCTGGACCAGTTGTTAGAG
CTTCTTTGAATCCCATGAGAAATGCAAAAGCCGCCCCTTCATCTCTTTCT
GTTGGTAAGAGAAAGAGACCCAATGAAAGATCAAAGGTTATCtcggaaga
agaaaaagaagctCTCAAGGCAAGAGAGGCTGCAAGGAAAAGAGTAGAAC
AGAGGGAGAAACCCTTGCTTGGGCTTTACAGTAAGCCTTACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR041591OCRE
IPR013085U1-CZ_Znf_C2H2
IPR040023WBP4
IPR000690Matrin/U1-C_Znf_C2H2
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus