rna-XM_004505139.3

Transcript Overview
Namerna-XM_004505139.3
Unique Namerna-XM_004505139.3_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length1329
Productpolyadenylate-binding protein RBP47-like
References
External references for this mRNA
DatabaseAccession
GeneID101494083
GenBankXM_004505139.3
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr6chromosomechr6:18121520..18125895 -Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascanL202Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascanL204Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cacanL202Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0439Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cacanL252Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0485Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0487Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascanL628Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cacanL315Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cacanL344Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0727Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0892Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cancanL166Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cancanR188Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cancanR194Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanL0713Cicer arietinum ICC 4958 genome v2Cicer arietinum
caicanL0969Cicer arietinum ICC 4958 genome v2Cicer arietinum
canccR0727Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR591Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canccR0919Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR637Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canvrvR473Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR388Vicia faba cv. Tiffany genome v1.0Vicia faba
canvfhR406Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvrvR519Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR431Vicia faba cv. Tiffany genome v1.0Vicia faba
canvrvR524Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canvrvR535Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canvrvR537Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR453Vicia faba cv. Tiffany genome v1.0Vicia faba
canvfhR450Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cantifR468Vicia faba cv. Tiffany genome v1.0Vicia faba
canvfhR471Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvfhR486Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canpvR571Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canpvR575Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canpvR586Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canpvR635Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvssR529Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR553Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR581Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR587Vicia sativa cv. Studenica genome v1.0Vicia sativa
canzwsR367Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canzwsR388Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR424Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canzwsR410Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canzwsR417Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR441Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR460Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuaR444Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR467Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuR472Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuaR489Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR531Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canpsR469Pisum sativum Cameor genome v1aPisum sativum
canpsR503Pisum sativum Cameor genome v1aPisum sativum
canpsR509Pisum sativum Cameor genome v1aPisum sativum
canpsR512Pisum sativum Cameor genome v1aPisum sativum
avjcanL244Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL249Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL519Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL630Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR409Cicer arietinum
cancarR416Cicer arietinum
cancarR443Cicer arietinum
cancarR450Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
jg29272.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
jg54894.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.2g132200.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-TanjilR_27925Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Psat7g122000.1Pisum sativum Cameor genome v1aPisum sativum
rna-KK1_019135Cajanus cajan Asha genome v1.0Cajanus cajan
evm.model.Chr09.1357Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.009G063200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Va04G068380.3Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat07G0316700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vfaba.Tiffany.R1.6g095800.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Cr_15227.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
LR48_mrnaVigan09g018600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Psat5g044160.1Pisum sativum Cameor genome v1aPisum sativum
Vfaba.Hedin2.R1.2g164000.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_30581Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014646559.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Phvul.003G294800.3Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_020572Cajanus cajan Asha genome v1.0Cajanus cajan
Psat05G0151000-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun03g184800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun09g240200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_014653962.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Cr_02770.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-TanjilR_23113Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.6g120600.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004501532.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_06431Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Ca_01529Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101494083gene-LOC101494083_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_004505139.3-6exon-XM_004505139.3-6_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004505139.3-5exon-XM_004505139.3-5_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004505139.3-4exon-XM_004505139.3-4_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004505139.3-3exon-XM_004505139.3-3_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004505139.3-2exon-XM_004505139.3-2_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004505139.3-1exon-XM_004505139.3-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_004505196.1cds-XP_004505196.1_CaCDCfrontier-NCBI_v1_6Cicer arietinumCDS
cds-XP_004505196.1cds-XP_004505196.1_CaCDCfrontier-NCBI_v1_5Cicer arietinumCDS
cds-XP_004505196.1cds-XP_004505196.1_CaCDCfrontier-NCBI_v1_4Cicer arietinumCDS
cds-XP_004505196.1cds-XP_004505196.1_CaCDCfrontier-NCBI_v1_3Cicer arietinumCDS
cds-XP_004505196.1cds-XP_004505196.1_CaCDCfrontier-NCBI_v1_2Cicer arietinumCDS
cds-XP_004505196.1cds-XP_004505196.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_004505139.3_CaCDCfrontier-NCBI_v1rna-XM_004505139.3_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_004505139.3_CaCDCfrontier-NCBI_v1rna-XM_004505139.3_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


Homology
[Close]
BLAST of rna-XM_004505139.3 vs. Araport11
Match: | (Symbols: ATRBP47B, RBP47B | RNA-binding protein 47B | chr3:6611398-6613823 REVERSE LENGTH=435)

HSP 1 Score: 484.182 bits (1245), Expect = 8.201e-170
Identity = 250/382 (65.45%), Postives = 300/382 (78.53%), Query Frame = 0 
Query:   37 WMS-MQYP--ATAMAMMQQQMMMYPQHYMPYVHPHHYQPPHQQQPSPPPQSHHNHHHHQQQQKQV------SPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGG 409
            WM+ MQYP  A  M M QQQM+MYP  Y+PY      Q P+QQ     PQ H    + Q Q +Q       S D++KT+W+GDL HWMDET+LH+CF+HTGEV S KVIRNK T QSEGYGF+EF SRA AE+VLQNY+G++MPN+DQ FR+NWASFS G  E+R+ +   DLS+FVGDL+ DVTD +L E F+ RY S+K AKVVIDSN+GRSKGYGFVRFGDENER+RA+TEMNG YCS+R MR+G+ATPK+   N QQ++SQAV+LAGGH SNG++  GSQS+G+S N TIFVGG+D D+ DEDLRQPF QFG+VVSVKIPVGKGCGFVQ ADRK+AEDAI++LNGT+IGK TVRLSWGRSP NK WR DS G  + GG
Sbjct:   40 WMAAMQYPPAAAMMMMQQQQMLMYPHQYVPY-----NQGPYQQHH---PQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRINWASFSTG--EKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWRGDS-GQQWNGG 409
[Close]
BLAST of rna-XM_004505139.3 vs. Araport11
Match: | (Symbols: RBP47A, ATRBP47A | RNA-binding protein 47A | chr1:18357236-18360150 REVERSE LENGTH=445)

HSP 1 Score: 449.514 bits (1155), Expect = 6.104e-156
Identity = 223/332 (67.17%), Postives = 266/332 (80.12%), Query Frame = 0 
Query:  101 DEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAARQNQDIAM 432
            D++KT+W+GDL HWMDET+LH CF+HT EV S KVIRNKQT QSEGYGF+EF SR+ AE+ LQ+++G  MPN +Q FRLNWASFS   GE+R+S+   DLSIFVGDLA DV+DA+L E FA RY S+KGAKVVIDSN+GRSKGYGFVRFGDENER+RAMTEMNG +CSSR MR+G+ATPK+     QQ  SQA+ LAGGH  N     GS S+G+SNN+TIFVGGLD+D+++EDL QPF  FG+VVSVKIPVGKGCGFVQ A+R++AE+AI  LNGT+IGK TVRLSWGRSP NK WR+DS GN + GG    G GY  +G+A   NQD  M
Sbjct:  116 DDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFST--GEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGN-----GSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP-NKQWRSDS-GNQWNGGYSR-GQGY-NNGYA---NQDSNM 433
[Close]
BLAST of rna-XM_004505139.3 vs. Araport11
Match: | (Symbols: RBP47A, ATRBP47A | RNA-binding protein 47A | chr1:18357827-18360150 REVERSE LENGTH=450)

HSP 1 Score: 432.18 bits (1110), Expect = 4.127e-149
Identity = 204/292 (69.86%), Postives = 243/292 (83.22%), Query Frame = 0 
Query:  101 DEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSP 392
            D++KT+W+GDL HWMDET+LH CF+HT EV S KVIRNKQT QSEGYGF+EF SR+ AE+ LQ+++G  MPN +Q FRLNWASFS   GE+R+S+   DLSIFVGDLA DV+DA+L E FA RY S+KGAKVVIDSN+GRSKGYGFVRFGDENER+RAMTEMNG +CSSR MR+G+ATPK+     QQ  SQA+ LAGGH  N     GS S+G+SNN+TIFVGGLD+D+++EDL QPF  FG+VVSVKIPVGKGCGFVQ A+R++AE+AI  LNGT+IGK TVRLSWGRSP
Sbjct:  116 DDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFST--GEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGN-----GSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP 400
[Close]
BLAST of rna-XM_004505139.3 vs. Araport11
Match: | (Symbols: RBP47A, ATRBP47A | RNA-binding protein 47A | chr1:18357827-18360150 REVERSE LENGTH=450)

HSP 1 Score: 432.18 bits (1110), Expect = 4.127e-149
Identity = 204/292 (69.86%), Postives = 243/292 (83.22%), Query Frame = 0 
Query:  101 DEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSP 392
            D++KT+W+GDL HWMDET+LH CF+HT EV S KVIRNKQT QSEGYGF+EF SR+ AE+ LQ+++G  MPN +Q FRLNWASFS   GE+R+S+   DLSIFVGDLA DV+DA+L E FA RY S+KGAKVVIDSN+GRSKGYGFVRFGDENER+RAMTEMNG +CSSR MR+G+ATPK+     QQ  SQA+ LAGGH  N     GS S+G+SNN+TIFVGGLD+D+++EDL QPF  FG+VVSVKIPVGKGCGFVQ A+R++AE+AI  LNGT+IGK TVRLSWGRSP
Sbjct:  116 DDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFST--GEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGN-----GSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP 400
[Close]
BLAST of rna-XM_004505139.3 vs. Araport11
Match: | (Symbols: RBP47C, ATRBP47C | RNA-binding protein 47C | chr1:17424801-17427182 FORWARD LENGTH=432)

HSP 1 Score: 428.328 bits (1100), Expect = 8.651e-148
Identity = 232/424 (54.72%), Postives = 286/424 (67.45%), Query Frame = 0 
Query:   16 QQQQQHQQQQPWAQPHQYQQQWMSMQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQPPHQQQPSPPPQSHHNHHHHQQQQKQVSPD-EIKTIWLGDLHHWMDETFLHNCFA--HTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAARQNQDIAMQPAA 436
            ++++   +  P   PH     WM  +YP T +  +  QMM  P  + PY   H Y           P  HH HH  +  + Q + + E KTIW+GDLHHWMDE +L++ FA     E+VS KVIRNK  G SEGYGF+EF S   A+KVL+ +NGT MPNTDQ FRLNWASFS G  E+R  +   DLSIFVGDL+ DV+D +L E F+ +Y S+K AKVV+D+N+GRSKGYGFVRFGDENERT+AMTEMNGV CSSRAMRIG ATP+KT G  QQ         GG+  NG +   ++ EGD  NTTIFVGGLDS ++DEDL+QPF +FG++VSVKIPVGKGCGFVQ  +R NAE+A++ LNGT+IGKQTVRLSWGR+P NK  R D  GN +     YGG  Y G+G+   Q  D  M PAA
Sbjct:   35 KEEENQPKTSPTPPPH-----WM--RYPPTVI--IPHQMMYAPPPFPPY---HQY-----------PNHHHLHHQSRGNKHQNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASFSTG--EKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQ---------GGYMPNGTL---TRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPR-DKYGNQWVDPY-YGGQFYNGYGYMVPQ-PDPRMYPAA 418
[Close]
BLAST of rna-XM_004505139.3 vs. Araport11
Match: | (Symbols: RBP47C', ATRBP47C' | RNA-binding protein 47C' | chr1:17432682-17434805 FORWARD LENGTH=434)

HSP 1 Score: 416.001 bits (1068), Expect = 6.442e-143
Identity = 217/358 (60.61%), Postives = 262/358 (73.18%), Query Frame = 0 
Query:   82 PQSHHNHHHHQQQQKQVSPD-EIKTIWLGDLHHWMDETFLHNCF--AHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAARQNQDIAMQPAA 436
            P  HH HH  +  + Q + + E KTIW+GDL +WMDE +L++ F  A   E+VS KVIRNK  G SEGYGF+EF S   A+KVLQ +NG  MPNTDQ FRLNWASFS G  E+R  +   DLSIFVGDLA DV+DA+L E F+ +Y S+K AKVV+D+N+GRSKGYGFVRFGDENERT+AMTEMNGV CSSRAMRIG ATP+KT G  QQ         GG+  +GA    ++SEGD+ NTTIFVGGLDS ++DEDL+QPF +FG++VSVKIPVGKGCGFVQ  +R NAE+A++ LNGT+IGKQTVRLSWGR+P NK  R D  GN +     YGG  Y G+G+   Q  D  M PAA
Sbjct:   80 PNHHHFHHQSRGNKHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTG--EKRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQ---------GGYMPSGAF---TRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPR-DKYGNQWVDPY-YGGQFYNGYGYMVPQ-PDPRMYPAA 420
[Close]
BLAST of rna-XM_004505139.3 vs. Araport11
Match: | (Symbols: RBP45B, ATRBP45B | | chr1:3914895-3917941 FORWARD LENGTH=405)

HSP 1 Score: 362.459 bits (929), Expect = 2.062e-122
Identity = 192/368 (52.17%), Postives = 242/368 (65.76%), Query Frame = 0 
Query:   65 VHPHHYQPPHQQQ-------------PSPPPQSHHNHHHHQQQQKQVSPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPN-TDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGG-GQGYGGHGY 417
            + PHH  PP  QQ               PPPQ  +         +  + DEI+T+W+GDL +WMDE FL+ CFAHTGE+VSAKVIRNKQTGQ EGYGFIEF S A AE+VLQ +N   +P+  DQ FRLNWAS S+G  ++R  D + D +IFVGDLA DVTD +L E F + Y S+KGAKVVID  +GR+KGYGFVRF DE+E+ RAMTEMNGV CS+R MRIG A  KK              + G   S  + A G  ++ D NNTT+FVGGLD+ ++D+ L+  F Q+G++V VKIP GK CGFVQ +++  AE+A++ LNG  +G  TVRLSWGRSP NK    D +  +YGG GQG   +GY
Sbjct:   10 ILPHHAPPPSAQQQYGYQQPYGIAGAAPPPPQMWNPQAAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSG--DKR--DDSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKKG-------------VTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQ-SGDPSQFYYGGYGQGQEQYGY 359
[Close]
BLAST of rna-XM_004505139.3 vs. Araport11
Match: | (Symbols: RBP45d | | chr5:6518978-6521295 FORWARD LENGTH=425)

HSP 1 Score: 360.918 bits (925), Expect = 1.887e-121
Identity = 184/383 (48.04%), Postives = 241/383 (62.92%), Query Frame = 0 
Query:   81 PPQSHHNHHHHQQQQKQVSPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQG--SQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNH---------------YGGGQGYGGHGYGGHGFA-----ARQNQDIAMQPAAAIQGA 441
            PPQ     +HH Q     + +E++T+W+GDL +W+DE +L +CF+ TGE+VS KVIRNK TGQ EGYGFIEF S A AE+ LQ YNGT MP T+  FRLNWASF +G    +  DA  D SIFVGDLA DVTD +LQE F   YSS++GAKVV D ++GRSKGYGFV+F +E+ER RAM EMNG+YCS+R MRI  ATPKK  G  QQY ++AV      S+  A  Q   +  E D   TTI V  LD ++++E+L++ F Q G+V+ VKIP  KG G+VQ   R +AE+A+Q + G +IG+Q VR+SW ++PG   W   ++ N                YG  Q    + YGG+G+          QDI+   A  + GA
Sbjct:    6 PPQPPQGSYHHPQ-----TLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSG----QKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGVQQQYVTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPGQDGWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGYGYPQYPQQGEGTQDISNSAAGGVAGA 379
[Close]
BLAST of rna-XM_004505139.3 vs. Araport11
Match: | (Symbols: RBP45d | | chr5:6518978-6521295 FORWARD LENGTH=421)

HSP 1 Score: 356.295 bits (913), Expect = 9.000e-120
Identity = 183/383 (47.78%), Postives = 240/383 (62.66%), Query Frame = 0 
Query:   81 PPQSHHNHHHHQQQQKQVSPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQG--SQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNH---------------YGGGQGYGGHGYGGHGFA-----ARQNQDIAMQPAAAIQGA 441
            PPQ     +HH Q     + +E++T+W+GDL +W+DE +L +CF+ TGE+VS KVIRNK TGQ EGYGFIEF S A AE+ LQ YNGT MP T+  FRLNWASF +G    +  DA  D SIFVGDLA DVTD +LQE F   YSS++GAKVV D ++GRSKGYGFV+F +E+ER RAM EMNG+YCS+R MRI  ATPKK  G  QQY ++  V     S+  A  Q   +  E D   TTI V  LD ++++E+L++ F Q G+V+ VKIP  KG G+VQ   R +AE+A+Q + G +IG+Q VR+SW ++PG   W   ++ N                YG  Q    + YGG+G+          QDI+   A  + GA
Sbjct:    6 PPQPPQGSYHHPQ-----TLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSG----QKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGVQQQYVTKVTV----PSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPGQDGWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGYGYPQYPQQGEGTQDISNSAAGGVAGA 375
[Close]
BLAST of rna-XM_004505139.3 vs. Araport11
Match: | (Symbols: RBP45A, ATRBP45A | RNA-binding protein 45A | chr5:22295412-22298126 FORWARD LENGTH=387)

HSP 1 Score: 344.354 bits (882), Expect = 1.313e-115
Identity = 180/338 (53.25%), Postives = 229/338 (67.75%), Query Frame = 0 
Query:   88 HHHHQQQQKQVSPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAAR 425
            H +    Q   S  ++K++W+GDL  WMDE ++ + FA +GE  SAKVIRNK TGQSEGYGFIEF S + AE+VLQ YNG  MP+T+Q FRLNWA   AG GE+R      D +IFVGDLA +VTD ML + F + Y S+KGAKVV+D  +GRSKGYGFVRF DENE+ RAMTEMNG YCS+R MRIG A  K     P Q A          ++ GA A     + D NNTTIFVGGLD++++D++L+  F QFG+++ VKIP GK CGFVQ A++ +AE A+  LNGT +G Q++RLSWGRSP  +  +   NG   GG  GY     GG+G+AA+
Sbjct:   44 HQYGIGSQNPGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPSTEQTFRLNWA--QAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNAL--PMQPAMY-------QNTQGANA----GDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSPNKQSDQAQWNG---GGYYGYPPQPQGGYGYAAQ 363
[Close]
BLAST of rna-XM_004505139.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LEB3|RBP47_NICPL (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 488.034 bits (1255), Expect = 2.316e-170
Identity = 275/438 (62.79%), Postives = 328/438 (74.89%), Query Frame = 0 
Query:    6 NSGDLNQHPQQQQQQHQQQQP-WAQPHQYQQQWMSMQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQPPHQQQPSPPPQSHHNHHHHQQQQKQVSPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAARQNQDIAMQPAAAIQGAS 442
            N GD+NQ  QQQQQQHQQQQ  W    QYQQQWM+MQYPA AMAM QQ M           +   +Q   + Q SP              Q Q S ++ KTIW+GDL  WMDE++LH+CF+  GEV+S K+IRNKQTGQSE YGF+EF + A AEKVLQ+YNGTMMPNT+Q FRLNWA FS G  E+R+ +  SD SIFVGDLA DVTD ML++ FASRY S+KGAKVV+D+N+G SKGYGFVRFGDE+ER+RAMTEMNGVYCSSRAMRIGVATPKK   + +QY+SQAV+L+GG++SNGA   GSQS+GDS+NTTIFVGGLDS+++DE+LRQ F QFG+VVSVKIP GKGCGFVQ +DR +A++AIQ L+G +IGKQ VRLSWGRSP NK  R DS G+ + GG   G   YGG+G+ A QNQD  M    A  GAS
Sbjct:    2 NGGDMNQQQQQQQQQHQQQQQQWLAMQQYQQQWMAMQYPAAAMAMQQQMMYGQQYM----PYYQQHQQQQKMQQSPT-------------QIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTG--EKRA-ETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAH-EQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDS-GSQWNGGYN-GRQNYGGYGYGASQNQDSGMYATGAAYGAS 416
[Close]
BLAST of rna-XM_004505139.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q0WW84|RB47B_ARATH (Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B PE=1 SV=1)

HSP 1 Score: 484.182 bits (1245), Expect = 7.812e-169
Identity = 250/382 (65.45%), Postives = 300/382 (78.53%), Query Frame = 0 
Query:   37 WMS-MQYP--ATAMAMMQQQMMMYPQHYMPYVHPHHYQPPHQQQPSPPPQSHHNHHHHQQQQKQV------SPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGG 409
            WM+ MQYP  A  M M QQQM+MYP  Y+PY      Q P+QQ     PQ H    + Q Q +Q       S D++KT+W+GDL HWMDET+LH+CF+HTGEV S KVIRNK T QSEGYGF+EF SRA AE+VLQNY+G++MPN+DQ FR+NWASFS G  E+R+ +   DLS+FVGDL+ DVTD +L E F+ RY S+K AKVVIDSN+GRSKGYGFVRFGDENER+RA+TEMNG YCS+R MR+G+ATPK+   N QQ++SQAV+LAGGH SNG++  GSQS+G+S N TIFVGG+D D+ DEDLRQPF QFG+VVSVKIPVGKGCGFVQ ADRK+AEDAI++LNGT+IGK TVRLSWGRSP NK WR DS G  + GG
Sbjct:   40 WMAAMQYPPAAAMMMMQQQQMLMYPHQYVPY-----NQGPYQQHH---PQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRINWASFSTG--EKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWRGDS-GQQWNGG 409
[Close]
BLAST of rna-XM_004505139.3 vs. UniProtKB/Swiss-Prot
Match: sp|F4I3B3|RB47A_ARATH (Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A PE=2 SV=1)

HSP 1 Score: 449.514 bits (1155), Expect = 5.818e-155
Identity = 223/332 (67.17%), Postives = 266/332 (80.12%), Query Frame = 0 
Query:  101 DEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAARQNQDIAM 432
            D++KT+W+GDL HWMDET+LH CF+HT EV S KVIRNKQT QSEGYGF+EF SR+ AE+ LQ+++G  MPN +Q FRLNWASFS   GE+R+S+   DLSIFVGDLA DV+DA+L E FA RY S+KGAKVVIDSN+GRSKGYGFVRFGDENER+RAMTEMNG +CSSR MR+G+ATPK+     QQ  SQA+ LAGGH  N     GS S+G+SNN+TIFVGGLD+D+++EDL QPF  FG+VVSVKIPVGKGCGFVQ A+R++AE+AI  LNGT+IGK TVRLSWGRSP NK WR+DS GN + GG    G GY  +G+A   NQD  M
Sbjct:  116 DDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFST--GEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGN-----GSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP-NKQWRSDS-GNQWNGGYSR-GQGY-NNGYA---NQDSNM 433
[Close]
BLAST of rna-XM_004505139.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SX79|RB47C_ARATH (Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C PE=2 SV=1)

HSP 1 Score: 428.328 bits (1100), Expect = 8.248e-147
Identity = 232/424 (54.72%), Postives = 286/424 (67.45%), Query Frame = 0 
Query:   16 QQQQQHQQQQPWAQPHQYQQQWMSMQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQPPHQQQPSPPPQSHHNHHHHQQQQKQVSPD-EIKTIWLGDLHHWMDETFLHNCFA--HTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAARQNQDIAMQPAA 436
            ++++   +  P   PH     WM  +YP T +  +  QMM  P  + PY   H Y           P  HH HH  +  + Q + + E KTIW+GDLHHWMDE +L++ FA     E+VS KVIRNK  G SEGYGF+EF S   A+KVL+ +NGT MPNTDQ FRLNWASFS G  E+R  +   DLSIFVGDL+ DV+D +L E F+ +Y S+K AKVV+D+N+GRSKGYGFVRFGDENERT+AMTEMNGV CSSRAMRIG ATP+KT G  QQ         GG+  NG +   ++ EGD  NTTIFVGGLDS ++DEDL+QPF +FG++VSVKIPVGKGCGFVQ  +R NAE+A++ LNGT+IGKQTVRLSWGR+P NK  R D  GN +     YGG  Y G+G+   Q  D  M PAA
Sbjct:   35 KEEENQPKTSPTPPPH-----WM--RYPPTVI--IPHQMMYAPPPFPPY---HQY-----------PNHHHLHHQSRGNKHQNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASFSTG--EKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQ---------GGYMPNGTL---TRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPR-DKYGNQWVDPY-YGGQFYNGYGYMVPQ-PDPRMYPAA 418
[Close]
BLAST of rna-XM_004505139.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SX80|R47CP_ARATH (Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C' PE=2 SV=1)

HSP 1 Score: 416.001 bits (1068), Expect = 6.144e-142
Identity = 217/358 (60.61%), Postives = 262/358 (73.18%), Query Frame = 0 
Query:   82 PQSHHNHHHHQQQQKQVSPD-EIKTIWLGDLHHWMDETFLHNCF--AHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAARQNQDIAMQPAA 436
            P  HH HH  +  + Q + + E KTIW+GDL +WMDE +L++ F  A   E+VS KVIRNK  G SEGYGF+EF S   A+KVLQ +NG  MPNTDQ FRLNWASFS G  E+R  +   DLSIFVGDLA DV+DA+L E F+ +Y S+K AKVV+D+N+GRSKGYGFVRFGDENERT+AMTEMNGV CSSRAMRIG ATP+KT G  QQ         GG+  +GA    ++SEGD+ NTTIFVGGLDS ++DEDL+QPF +FG++VSVKIPVGKGCGFVQ  +R NAE+A++ LNGT+IGKQTVRLSWGR+P NK  R D  GN +     YGG  Y G+G+   Q  D  M PAA
Sbjct:   80 PNHHHFHHQSRGNKHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTG--EKRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQ---------GGYMPSGAF---TRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPR-DKYGNQWVDPY-YGGQFYNGYGYMVPQ-PDPRMYPAA 420
[Close]
BLAST of rna-XM_004505139.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LEB4|RBP45_NICPL (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP45 PE=1 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 4.210e-123
Identity = 176/298 (59.06%), Postives = 218/298 (73.15%), Query Frame = 0 
Query:   99 SPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKH 396
            +P+E++++W+GDL +WMDE +L  CF HTGE+VSAKVIRNKQTGQSEGYGF+EF S A AE +LQ YNGT+MPN +Q FR+NWAS   G GERR  D +++ +IFVGDLA DVTD +LQE F S YSS++GAKVV D  +GRSKGYGFV+F DE+E+ RAMTEMNGV CS+R MRIG A  KK  G PQ+   Q               Q +Q E D NNTTIFVGGLD  +++E LRQ F  +G++V VKI  GK CGFVQ   R +AE A+ +LNGT +G Q++RLSWGRSP +K 
Sbjct:   79 NPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQSEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASL--GAGERR--DDSAEHTIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVLCSTRPMRIGPAANKKPVGTPQKATYQN-------------PQATQGESDPNNTTIFVGGLDPTVAEEHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGRSPSSKQ 359
[Close]
BLAST of rna-XM_004505139.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SAB3|RB45B_ARATH (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B PE=1 SV=1)

HSP 1 Score: 362.459 bits (929), Expect = 1.968e-121
Identity = 192/368 (52.17%), Postives = 242/368 (65.76%), Query Frame = 0 
Query:   65 VHPHHYQPPHQQQ-------------PSPPPQSHHNHHHHQQQQKQVSPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPN-TDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGG-GQGYGGHGY 417
            + PHH  PP  QQ               PPPQ  +         +  + DEI+T+W+GDL +WMDE FL+ CFAHTGE+VSAKVIRNKQTGQ EGYGFIEF S A AE+VLQ +N   +P+  DQ FRLNWAS S+G  ++R  D + D +IFVGDLA DVTD +L E F + Y S+KGAKVVID  +GR+KGYGFVRF DE+E+ RAMTEMNGV CS+R MRIG A  KK              + G   S  + A G  ++ D NNTT+FVGGLD+ ++D+ L+  F Q+G++V VKIP GK CGFVQ +++  AE+A++ LNG  +G  TVRLSWGRSP NK    D +  +YGG GQG   +GY
Sbjct:   10 ILPHHAPPPSAQQQYGYQQPYGIAGAAPPPPQMWNPQAAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSG--DKR--DDSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKKG-------------VTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQ-SGDPSQFYYGGYGQGQEQYGY 359
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BLAST of rna-XM_004505139.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8VXZ9|R47BP_ARATH (Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B' PE=2 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 1.802e-120
Identity = 184/383 (48.04%), Postives = 241/383 (62.92%), Query Frame = 0 
Query:   81 PPQSHHNHHHHQQQQKQVSPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQG--SQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNH---------------YGGGQGYGGHGYGGHGFA-----ARQNQDIAMQPAAAIQGA 441
            PPQ     +HH Q     + +E++T+W+GDL +W+DE +L +CF+ TGE+VS KVIRNK TGQ EGYGFIEF S A AE+ LQ YNGT MP T+  FRLNWASF +G    +  DA  D SIFVGDLA DVTD +LQE F   YSS++GAKVV D ++GRSKGYGFV+F +E+ER RAM EMNG+YCS+R MRI  ATPKK  G  QQY ++AV      S+  A  Q   +  E D   TTI V  LD ++++E+L++ F Q G+V+ VKIP  KG G+VQ   R +AE+A+Q + G +IG+Q VR+SW ++PG   W   ++ N                YG  Q    + YGG+G+          QDI+   A  + GA
Sbjct:    6 PPQPPQGSYHHPQ-----TLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSG----QKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGVQQQYVTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPGQDGWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGYGYPQYPQQGEGTQDISNSAAGGVAGA 379
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BLAST of rna-XM_004505139.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q0J9Y2|RBPL_ORYSJ (RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=1)

HSP 1 Score: 358.221 bits (918), Expect = 1.704e-119
Identity = 182/333 (54.65%), Postives = 227/333 (68.17%), Query Frame = 0 
Query:   80 PPPQSHHNH----------HHHQQQQKQVSPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSN 402
            PPPQ+H+               Q      + DE+KT+W+GDL  WMDE++++NCFA TGEV S K+IR+KQ+GQ +GYGF+EF SRA A+++LQ YNG MMPN +  FRLNWAS     GE+R  D T D +IFVGDLA DVTD +LQE F   Y S+KGAKVV D  + RSKGYGFV+FGD  E+ RAMTEMNG+ CSSR MRIG A  KKT G  ++  +               AQG+QSE D NNTTIFVGGLD +++++ L+Q F  +G+VV VKIPVGK CGFVQ  +R +AE A+  L GT+IG Q VRLSWGRS  NK  ++DSN
Sbjct:   56 PPPQAHYGQVPPPQPYYAAPPPQAMPAPAAADEVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQTYNGQMMPNVEMVFRLNWAS----AGEKR--DDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGVQERVPN---------------AQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQPQHDSN 367
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BLAST of rna-XM_004505139.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FPJ8|RB45A_ARATH (Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana OX=3702 GN=RBP45A PE=2 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 1.253e-114
Identity = 180/338 (53.25%), Postives = 229/338 (67.75%), Query Frame = 0 
Query:   88 HHHHQQQQKQVSPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAAR 425
            H +    Q   S  ++K++W+GDL  WMDE ++ + FA +GE  SAKVIRNK TGQSEGYGFIEF S + AE+VLQ YNG  MP+T+Q FRLNWA   AG GE+R      D +IFVGDLA +VTD ML + F + Y S+KGAKVV+D  +GRSKGYGFVRF DENE+ RAMTEMNG YCS+R MRIG A  K     P Q A          ++ GA A     + D NNTTIFVGGLD++++D++L+  F QFG+++ VKIP GK CGFVQ A++ +AE A+  LNGT +G Q++RLSWGRSP  +  +   NG   GG  GY     GG+G+AA+
Sbjct:   44 HQYGIGSQNPGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPSTEQTFRLNWA--QAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNAL--PMQPAMY-------QNTQGANA----GDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSPNKQSDQAQWNG---GGYYGYPPQPQGGYGYAAQ 363
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BLAST of rna-XM_004505139.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YIS3|A0A1S2YIS3_CICAR (Polyadenylate-binding protein RBP47-like OS=Cicer arietinum OX=3827 GN=LOC101494083 PE=4 SV=1)

HSP 1 Score: 921.383 bits (2380), Expect = 0.000e+0
Identity = 442/442 (100.00%), Postives = 442/442 (100.00%), Query Frame = 0 
Query:    1 MAQQSNSGDLNQHPQQQQQQHQQQQPWAQPHQYQQQWMSMQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQPPHQQQPSPPPQSHHNHHHHQQQQKQVSPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAARQNQDIAMQPAAAIQGAS 442
            MAQQSNSGDLNQHPQQQQQQHQQQQPWAQPHQYQQQWMSMQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQPPHQQQPSPPPQSHHNHHHHQQQQKQVSPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAARQNQDIAMQPAAAIQGAS
Sbjct:    1 MAQQSNSGDLNQHPQQQQQQHQQQQPWAQPHQYQQQWMSMQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQPPHQQQPSPPPQSHHNHHHHQQQQKQVSPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAARQNQDIAMQPAAAIQGAS 442
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BLAST of rna-XM_004505139.3 vs. UniProtKB/TrEMBL
Match: tr|A0A6P4BXH7|A0A6P4BXH7_ARADU (Polyadenylate-binding protein RBP47 OS=Arachis duranensis OX=130453 GN=LOC107470046 PE=4 SV=1)

HSP 1 Score: 672.544 bits (1734), Expect = 0.000e+0
Identity = 366/461 (79.39%), Postives = 391/461 (84.82%), Query Frame = 0 
Query:    1 MAQQSNSGDLNQHPQQQQQQHQQQQPWAQPHQYQQQWMSMQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQPPHQQQPSPPPQS------------------HHNHHHHQQQQKQVSP-DEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAARQNQDIAMQPAAAIQGAS 442
            MAQ +N GDLNQ+ QQQ QQ       AQPHQYQQQWM+MQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQPP     +                       HHN+HH QQ+Q+  S  +EI+TIWLGDLHHWMDE +L NCFAHTGEV+SAKVIRNKQTGQSEGYGF+EFYSRATAEKVLQNYNGTMMPNTDQAFRLNWA+FS G  +RRS  ATSDLSIFVGDLAIDVTDAMLQE F+SRYSSIKGAKVVIDSN+GRSKGYGFVRFGDENERTRAMTEMNG+YCSSR MRIGVATPKKTYG  QQY+SQAVVLAGGH SNG VAQGSQ+EGD NNTTIFVGGLDSDI D+DLRQPFLQFG+VVSVKIPVGKGCGFVQ ADRKNAE+AIQALNGT+IGKQTVRLSWGRSPGNKHWR DSNGNH      YGG GYG HGFA +QNQDIA+QPAAAIQGAS
Sbjct:    1 MAQATNGGDLNQNGQQQSQQQW-----AQPHQYQQQWMAMQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQPPPPPPTAHHHHQHHFKQQQTPPPSSQPPQQHHNNHHGQQKQQSGSNGEEIRTIWLGDLHHWMDENYLVNCFAHTGEVLSAKVIRNKQTGQSEGYGFVEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWATFSTG--DRRSDAATSDLSIFVGDLAIDVTDAMLQETFSSRYSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKTYGYQQQYSSQAVVLAGGHPSNGVVAQGSQAEGDLNNTTIFVGGLDSDIGDDDLRQPFLQFGEVVSVKIPVGKGCGFVQFADRKNAEEAIQALNGTVIGKQTVRLSWGRSPGNKHWRADSNGNH------YGGQGYGNHGFAVKQNQDIAVQPAAAIQGAS 448
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BLAST of rna-XM_004505139.3 vs. UniProtKB/TrEMBL
Match: tr|A0A444X3Y9|A0A444X3Y9_ARAHY (RRM domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B10g103511 PE=4 SV=1)

HSP 1 Score: 672.544 bits (1734), Expect = 0.000e+0
Identity = 366/461 (79.39%), Postives = 391/461 (84.82%), Query Frame = 0 
Query:    1 MAQQSNSGDLNQHPQQQQQQHQQQQPWAQPHQYQQQWMSMQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQPPHQQQPSPPPQS------------------HHNHHHHQQQQKQVSP-DEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAARQNQDIAMQPAAAIQGAS 442
            MAQ +N GDLNQ+ QQQ QQ       AQPHQYQQQWM+MQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQPP     +                       HHN+HH QQ+Q+  S  +EI+TIWLGDLHHWMDE +L NCFAHTGEV+SAKVIRNKQTGQSEGYGF+EFYSRATAEKVLQNYNGTMMPNTDQAFRLNWA+FS G  +RRS  ATSDLSIFVGDLAIDVTDAMLQE F+SRYSSIKGAKVVIDSN+GRSKGYGFVRFGDENERTRAMTEMNG+YCSSR MRIGVATPKKTYG  QQY+SQAVVLAGGH SNG VAQGSQ+EGD NNTTIFVGGLDSDI D+DLRQPFLQFG+VVSVKIPVGKGCGFVQ ADRKNAE+AIQALNGT+IGKQTVRLSWGRSPGNKHWR DSNGNH      YGG GYG HGFA +QNQDIA+QPAAAIQGAS
Sbjct:    1 MAQATNGGDLNQNGQQQSQQQW-----AQPHQYQQQWMAMQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQPPPPPPTAHHHHQHHFKQQQTPPPSSQPPQQHHNNHHGQQKQQSGSNGEEIRTIWLGDLHHWMDENYLVNCFAHTGEVLSAKVIRNKQTGQSEGYGFVEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWATFSTG--DRRSDAATSDLSIFVGDLAIDVTDAMLQETFSSRYSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKTYGYQQQYSSQAVVLAGGHPSNGVVAQGSQAEGDLNNTTIFVGGLDSDIGDDDLRQPFLQFGEVVSVKIPVGKGCGFVQFADRKNAEEAIQALNGTVIGKQTVRLSWGRSPGNKHWRADSNGNH------YGGQGYGNHGFAVKQNQDIAVQPAAAIQGAS 448
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BLAST of rna-XM_004505139.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3P9B7|A0A2K3P9B7_TRIPR (Polyadenylate-binding protein rbp47-like OS=Trifolium pratense OX=57577 GN=L195_g008483 PE=4 SV=1)

HSP 1 Score: 662.914 bits (1709), Expect = 0.000e+0
Identity = 378/466 (81.12%), Postives = 405/466 (86.91%), Query Frame = 0 
Query:    1 MAQQSNSGDLNQHPQQQQQQHQQQQP--------WA--QPHQYQQQWMSMQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQPPHQQQPSPPPQSHHNHHHHQQQQKQ--------VSPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGG----ERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGG--HSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAARQNQDIAMQPAAAIQGAS 442
            MAQQ+N GDLNQ+         Q           WA  QPHQYQQQWMSMQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQ P  QQ   PP +  +H+H+   Q+Q        VSP+EI+TIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGF+EFYSRA AEKVLQN+NGTMMPNTDQAFRLNWA+FSA GG    ERRSS+ATSDLS+FVGDLAIDVTDAMLQEVFASR+SSIKGAKVVIDSN+GRSKGYGFVRFGDENERTRAMTEMNGVYCSSR MR+GVATPKKTYGNPQQY+SQAVVLAGG  HSSNGAVAQGSQS+GDSNNTTIFVGGLDS+ISDEDLRQPFLQFGDV+SVKIPVGKGCGFVQLADRKNAEDAIQALNGT+IGKQTVRLSWGRSPGNKHWRNDSNG++ GG  G+G  G  G+  AARQNQDIAMQPAAA+QGAS
Sbjct:    1 MAQQTNGGDLNQNNSNNNNNQNQTPQQQQXXQQQWAAAQPHQYQQQWMSMQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQQPPHQQQVSPPPNQSHHNHNHHHQQQQHQYQQKQVSPEEIRTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRAMAEKVLQNFNGTMMPNTDQAFRLNWATFSAAGGGGGGERRSSEATSDLSVFVGDLAIDVTDAMLQEVFASRFSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRVGVATPKKTYGNPQQYSSQAVVLAGGGGHSSNGAVAQGSQSDGDSNNTTIFVGGLDSEISDEDLRQPFLQFGDVISVKIPVGKGCGFVQLADRKNAEDAIQALNGTVIGKQTVRLSWGRSPGNKHWRNDSNGHYGGGYGGHGYGGGHGY--AARQNQDIAMQPAAAVQGAS 464
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BLAST of rna-XM_004505139.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445JZY9|A0A445JZY9_GLYSO (Polyadenylate-binding protein RBP47 isoform A OS=Glycine soja OX=3848 GN=D0Y65_018538 PE=4 SV=1)

HSP 1 Score: 658.677 bits (1698), Expect = 0.000e+0
Identity = 357/442 (80.77%), Postives = 378/442 (85.52%), Query Frame = 0 
Query:    1 MAQQSNSGDLNQHPQQQQQQHQQQQPWAQPHQYQQQWMSMQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQPPHQQQPSPPPQSHHNHHHHQQQQKQVSPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAARQNQDIAMQPAAAIQGAS 442
            MAQ S++GDLN + Q Q QQ QQQ   AQPHQYQQQWM+MQYPATAMAMMQQQMMMYPQHYM      H   P    P      HH+           S DEI+T+WLGDLHHWMDE +LHNCFAHTGEVVSAKVIRNKQTGQSEGYGF+EFYSRATAEKVLQNYNGTMMPNTDQAFRLNWA+FSAG  ERRSSDATSDLSIFVGDLAIDVTDAMLQE FA RYSSIKGAKVVIDSN+GRSKGYGFVRFGDENERTRAMTEMNGVYCSSR MRIGVATPKKTYG  QQY+SQAV+LAGGH++NGAVAQGS SEGD NNTTIFVGGLDSD SDEDLRQPFLQFG+VVSVKIPVGKGCGFVQ ADRKNAE+AI ALNGT+IGKQTVRLSWGRSPGNKHWR+DSNG +      +GG  YGGHGFA RQNQDIAMQPA AIQGAS
Sbjct:    1 MAQPSSNGDLNNNQQGQVQQQQQQWAAAQPHQYQQQWMAMQYPATAMAMMQQQMMMYPQHYM---PYAHPHYPPPPPPPQSSHHHHHKQAAAAAAAAASSDEIRTVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWATFSAG--ERRSSDATSDLSIFVGDLAIDVTDAMLQETFAGRYSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRIGVATPKKTYGYQQQYSSQAVLLAGGHAANGAVAQGSHSEGDLNNTTIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVGKGCGFVQFADRKNAEEAIHALNGTVIGKQTVRLSWGRSPGNKHWRSDSNGGY------FGGQSYGGHGFAVRQNQDIAMQPATAIQGAS 431
[Close]
BLAST of rna-XM_004505139.3 vs. UniProtKB/TrEMBL
Match: tr|I1KLY0|I1KLY0_SOYBN (RRM domain-containing protein OS=Glycine max OX=3847 GN=100814564 PE=4 SV=1)

HSP 1 Score: 658.677 bits (1698), Expect = 0.000e+0
Identity = 357/442 (80.77%), Postives = 378/442 (85.52%), Query Frame = 0 
Query:    1 MAQQSNSGDLNQHPQQQQQQHQQQQPWAQPHQYQQQWMSMQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQPPHQQQPSPPPQSHHNHHHHQQQQKQVSPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAARQNQDIAMQPAAAIQGAS 442
            MAQ S++GDLN + Q Q QQ QQQ   AQPHQYQQQWM+MQYPATAMAMMQQQMMMYPQHYM      H   P    P      HH+           S DEI+T+WLGDLHHWMDE +LHNCFAHTGEVVSAKVIRNKQTGQSEGYGF+EFYSRATAEKVLQNYNGTMMPNTDQAFRLNWA+FSAG  ERRSSDATSDLSIFVGDLAIDVTDAMLQE FA RYSSIKGAKVVIDSN+GRSKGYGFVRFGDENERTRAMTEMNGVYCSSR MRIGVATPKKTYG  QQY+SQAV+LAGGH++NGAVAQGS SEGD NNTTIFVGGLDSD SDEDLRQPFLQFG+VVSVKIPVGKGCGFVQ ADRKNAE+AI ALNGT+IGKQTVRLSWGRSPGNKHWR+DSNG +      +GG  YGGHGFA RQNQDIAMQPA AIQGAS
Sbjct:    1 MAQPSSNGDLNNNQQGQVQQQQQQWAAAQPHQYQQQWMAMQYPATAMAMMQQQMMMYPQHYM---PYAHPHYPPPPPPPQSSHHHHHKQAAAAAAAAASSDEIRTVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWATFSAG--ERRSSDATSDLSIFVGDLAIDVTDAMLQETFAGRYSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRIGVATPKKTYGYQQQYSSQAVLLAGGHAANGAVAQGSHSEGDLNNTTIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVGKGCGFVQFADRKNAEEAIHALNGTVIGKQTVRLSWGRSPGNKHWRSDSNGGY------FGGQSYGGHGFAVRQNQDIAMQPATAIQGAS 431
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BLAST of rna-XM_004505139.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4VQJ9|A0A9D4VQJ9_PEA (Polyadenylate-binding protein rbp47b OS=Pisum sativum OX=3888 GN=KIW84_073167 PE=4 SV=1)

HSP 1 Score: 648.662 bits (1672), Expect = 0.000e+0
Identity = 362/427 (84.78%), Postives = 385/427 (90.16%), Query Frame = 0 
Query:   33 YQQQWMSMQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQPPHQQQPSPPPQSHHNHHHHQQQQ------------KQVSPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGG---ERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGG-HSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAARQNQDIAM-QPAAAIQGAS 442
            YQQQWMSMQYPATAMAMMQQQMMMYPQHYM YVHPHHYQ P  QQ   PP S  +HH H                KQVSP+EI+TIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTG SEGYGF+EFYSR TAEKVLQN+NG MMPNTDQ FRLNWA+FSAGGG   ERRSS+ATSDLS+FVGDLAIDVTDAMLQEVFASR+SSIKGAKVVIDSN+GRSKGYGFVRFGDENERTRAMTEMNGVYCSSR MR+GVATPKKTYGNPQQY+SQAVVLAGG HS+NGAVAQGSQSEGDSNNTTIFVGGLDS+ISDEDLRQPFLQ+GDVVSVKIP+GKGCGFVQLADRKNAE+AIQ LNGT+IGKQTVRLSWGRSPGNKHWRN+ +  ++ GGQGYGGHGYGGHG+AARQNQDIAM QPAAAIQGAS
Sbjct:   49 YQQQWMSMQYPATAMAMMQQQMMMYPQHYMSYVHPHHYQAPPHQQQPSPPPSTQSHHGHGHGHGHHLHHQQQHQQKQVSPEEIRTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGVSEGYGFVEFYSRGTAEKVLQNFNGAMMPNTDQPFRLNWATFSAGGGGGGERRSSEATSDLSVFVGDLAIDVTDAMLQEVFASRFSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRVGVATPKKTYGNPQQYSSQAVVLAGGGHSANGAVAQGSQSEGDSNNTTIFVGGLDSEISDEDLRQPFLQYGDVVSVKIPIGKGCGFVQLADRKNAEEAIQGLNGTVIGKQTVRLSWGRSPGNKHWRNNDSNGNHYGGQGYGGHGYGGHGYAARQNQDIAMQQPAAAIQGAS 475
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BLAST of rna-XM_004505139.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8KTI7|A0A8B8KTI7_ABRPR (Polyadenylate-binding protein RBP47 OS=Abrus precatorius OX=3816 GN=LOC113857859 PE=4 SV=1)

HSP 1 Score: 648.277 bits (1671), Expect = 0.000e+0
Identity = 365/442 (82.58%), Postives = 379/442 (85.75%), Query Frame = 0 
Query:    1 MAQQSNSGDLNQHPQQQQQQHQQQQPWAQPHQYQQQWMSMQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQPPHQQQPSPPPQSHHNHHHHQQQQKQVSPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAARQNQDIAMQPAAAIQGAS 442
            MAQ + +GDLNQ  QQ QQQ  Q        QYQQQWM+MQYPATAMAMMQQQMMMYPQHYMPYVH H+             Q     HHH    KQ S DEI+TIWLGDLHHWMDE +LHNCFAHTGEVVSAKVIRNKQTGQSEGYGF+EFYSR TAEK+LQNYNGTMMPNTDQAFRLNWA+FSAG  ERR  DATSDLSIFVGDLAIDVTDAMLQE FASRYSSIKGAKVVIDSN+GRSKGYGFVRFGDENERTRAMTEMNGVYCSSR MRIGVATPKKTYG  QQY+SQAVVLAGGHSSNGAV QGSQSEGD NNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQ ADRKNAE+AIQALNGT+IGKQTVRLSWGRSPGNKHWR DSNG+HYGG         GGHGFAARQNQDIAMQPAAAIQGAS
Sbjct:    1 MAQPTTNGDLNQQAQQPQQQWAQPH------QYQQQWMAMQYPATAMAMMQQQMMMYPQHYMPYVHHHYQPQ----------QPPPPPHHHHHHHKQASSDEIRTIWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRPTAEKILQNYNGTMMPNTDQAFRLNWATFSAG--ERRP-DATSDLSIFVGDLAIDVTDAMLQETFASRYSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRIGVATPKKTYGYQQQYSSQAVVLAGGHSSNGAVVQGSQSEGDLNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQFADRKNAEEAIQALNGTIIGKQTVRLSWGRSPGNKHWRTDSNGSHYGGQGY------GGHGFAARQNQDIAMQPAAAIQGAS 417
[Close]
BLAST of rna-XM_004505139.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4VNR5|A0A9D4VNR5_PEA (Variant 2, Polyadenylate-binding protein rbp47b OS=Pisum sativum OX=3888 GN=KIW84_073167 PE=4 SV=1)

HSP 1 Score: 641.728 bits (1654), Expect = 0.000e+0
Identity = 358/426 (84.04%), Postives = 382/426 (89.67%), Query Frame = 0 
Query:   33 YQQQWMSMQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQPPHQQQPSPPPQSHHNHHHHQQQQ------------KQVSPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGG---ERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAARQNQDIAM-QPAAAIQGAS 442
            YQQQWMSMQYPATAMAMMQQQMMMYPQHYM YVHPHHYQ P  QQ   PP S  +HH H                KQVSP+EI+TIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTG SEGYGF+EFYSR TAEKVLQN+NG MMPNTDQ FRLNWA+FSAGGG   ERRSS+ATSDLS+FVGDLAIDVTDAMLQEVFASR+SSIKGAKVVIDSN+GRSKGYGFVRFGDENERTRAMTEMNGVYCSSR MR+GVATPKKTYGNPQQY+SQ V+  GGHS+NGAVAQGSQSEGDSNNTTIFVGGLDS+ISDEDLRQPFLQ+GDVVSVKIP+GKGCGFVQLADRKNAE+AIQ LNGT+IGKQTVRLSWGRSPGNKHWRN+ +  ++ GGQGYGGHGYGGHG+AARQNQDIAM QPAAAIQGAS
Sbjct:   49 YQQQWMSMQYPATAMAMMQQQMMMYPQHYMSYVHPHHYQAPPHQQQPSPPPSTQSHHGHGHGHGHHLHHQQQHQQKQVSPEEIRTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGVSEGYGFVEFYSRGTAEKVLQNFNGAMMPNTDQPFRLNWATFSAGGGGGGERRSSEATSDLSVFVGDLAIDVTDAMLQEVFASRFSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRVGVATPKKTYGNPQQYSSQ-VLAGGGHSANGAVAQGSQSEGDSNNTTIFVGGLDSEISDEDLRQPFLQYGDVVSVKIPIGKGCGFVQLADRKNAEEAIQGLNGTVIGKQTVRLSWGRSPGNKHWRNNDSNGNHYGGQGYGGHGYGGHGYAARQNQDIAMQQPAAAIQGAS 473
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BLAST of rna-XM_004505139.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445LNQ5|A0A445LNQ5_GLYSO (Polyadenylate-binding protein RBP47 isoform A OS=Glycine soja OX=3848 GN=D0Y65_003825 PE=4 SV=1)

HSP 1 Score: 638.262 bits (1645), Expect = 0.000e+0
Identity = 361/446 (80.94%), Postives = 381/446 (85.43%), Query Frame = 0 
Query:    1 MAQQSNSGDLNQHPQQQQQQHQQQQPWAQ----PHQYQQQWMSMQYPATAMAMMQQQMMMYPQHYMPYVHPHHYQPPHQQQPSPPPQSHHNHHHHQQQQKQVSPDEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFIEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDLSIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGHSSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRNDSNGNHYGGGQGYGGHGYGGHGFAARQNQDIAMQPAAAIQGAS 442
            MAQ S++GDLN + QQ Q Q QQQQ        PHQYQQQWM+MQYPATAMAMMQQQM+MYPQHYM           H   P PPP    +HHHH  +Q   S DEI+T+WLGDLHHWMDE +LHNCFAHTGEVVSAKVIRNKQTGQSEGYGF+EFYSR TAEKVLQNYNGTMMPNTDQAFRLNWA+FSAG  ERRSSDATSDLSIFVGDLAIDVTDAMLQ+ FA RYSSIKGAKVVIDSN+GRSKGYGFVRFGDENERTRAMTEMNGVYCSSR MRIGVATPKKTYG  QQY+SQAVVLAGGHS+NGAVAQGS SEGD NNTTIFVGGLDSD SDEDLRQPFLQFG+VVSVKIPVGKGCGFVQ ADRKNAE+AIQ LNGT+IGKQTVRLSWGRSPGNKHWR+DSNG         G  GYGGHGFA RQNQDIAMQPAAAIQGAS
Sbjct:    1 MAQPSSNGDLNNNQQQGQVQQQQQQGQWAAAAQPHQYQQQWMAMQYPATAMAMMQQQMLMYPQHYM--------PYAHPHYPPPPPPPPSSHHHHHHKQAAASSDEIRTVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRGTAEKVLQNYNGTMMPNTDQAFRLNWATFSAG--ERRSSDATSDLSIFVGDLAIDVTDAMLQDTFAGRYSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRIGVATPKKTYGFQQQYSSQAVVLAGGHSANGAVAQGSHSEGDINNTTIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVGKGCGFVQFADRKNAEEAIQGLNGTVIGKQTVRLSWGRSPGNKHWRSDSNGG-----HYGGHQGYGGHGFAVRQNQDIAMQPAAAIQGAS 431
The following BLAST results are available for this feature:
BLAST of rna-XM_004505139.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|8.201e-17065.45Symbols: ATRBP47B, RBP47B | RNA-binding protein 47... [more]
|6.104e-15667.17Symbols: RBP47A, ATRBP47A | RNA-binding protein 47... [more]
|4.127e-14969.86Symbols: RBP47A, ATRBP47A | RNA-binding protein 47... [more]
|4.127e-14969.86Symbols: RBP47A, ATRBP47A | RNA-binding protein 47... [more]
|8.651e-14854.72Symbols: RBP47C, ATRBP47C | RNA-binding protein 47... [more]
|6.442e-14360.61Symbols: RBP47C', ATRBP47C' | RNA-binding protein ... [more]
|2.062e-12252.17Symbols: RBP45B, ATRBP45B | | chr1:3914895-391794... [more]
|1.887e-12148.04Symbols: RBP45d | | chr5:6518978-6521295 FORWARD ... [more]
|9.000e-12047.78Symbols: RBP45d | | chr5:6518978-6521295 FORWARD ... [more]
|1.313e-11553.25Symbols: RBP45A, ATRBP45A | RNA-binding protein 45... [more]
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BLAST of rna-XM_004505139.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q9LEB3|RBP47_NICPL2.316e-17062.79Polyadenylate-binding protein RBP47 OS=Nicotiana p... [more]
sp|Q0WW84|RB47B_ARATH7.812e-16965.45Polyadenylate-binding protein RBP47B OS=Arabidopsi... [more]
sp|F4I3B3|RB47A_ARATH5.818e-15567.17Polyadenylate-binding protein RBP47A OS=Arabidopsi... [more]
sp|Q9SX79|RB47C_ARATH8.248e-14754.72Polyadenylate-binding protein RBP47C OS=Arabidopsi... [more]
sp|Q9SX80|R47CP_ARATH6.144e-14260.61Polyadenylate-binding protein RBP47C' OS=Arabidops... [more]
sp|Q9LEB4|RBP45_NICPL4.210e-12359.06Polyadenylate-binding protein RBP45 OS=Nicotiana p... [more]
sp|Q9SAB3|RB45B_ARATH1.968e-12152.17Polyadenylate-binding protein RBP45B OS=Arabidopsi... [more]
sp|Q8VXZ9|R47BP_ARATH1.802e-12048.04Polyadenylate-binding protein RBP47B' OS=Arabidops... [more]
sp|Q0J9Y2|RBPL_ORYSJ1.704e-11954.65RNA-binding protein L OS=Oryza sativa subsp. japon... [more]
sp|Q9FPJ8|RB45A_ARATH1.253e-11453.25Polyadenylate-binding protein RBP45A OS=Arabidopsi... [more]
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BLAST of rna-XM_004505139.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2YIS3|A0A1S2YIS3_CICAR0.000e+0100.00Polyadenylate-binding protein RBP47-like OS=Cicer ... [more]
tr|A0A6P4BXH7|A0A6P4BXH7_ARADU0.000e+079.39Polyadenylate-binding protein RBP47 OS=Arachis dur... [more]
tr|A0A444X3Y9|A0A444X3Y9_ARAHY0.000e+079.39RRM domain-containing protein OS=Arachis hypogaea ... [more]
tr|A0A2K3P9B7|A0A2K3P9B7_TRIPR0.000e+081.12Polyadenylate-binding protein rbp47-like OS=Trifol... [more]
tr|A0A445JZY9|A0A445JZY9_GLYSO0.000e+080.77Polyadenylate-binding protein RBP47 isoform A OS=G... [more]
tr|I1KLY0|I1KLY0_SOYBN0.000e+080.77RRM domain-containing protein OS=Glycine max OX=38... [more]
tr|A0A9D4VQJ9|A0A9D4VQJ9_PEA0.000e+084.78Polyadenylate-binding protein rbp47b OS=Pisum sati... [more]
tr|A0A8B8KTI7|A0A8B8KTI7_ABRPR0.000e+082.58Polyadenylate-binding protein RBP47 OS=Abrus preca... [more]
tr|A0A9D4VNR5|A0A9D4VNR5_PEA0.000e+084.04Variant 2, Polyadenylate-binding protein rbp47b OS... [more]
tr|A0A445LNQ5|A0A445LNQ5_GLYSO0.000e+080.94Polyadenylate-binding protein RBP47 isoform A OS=G... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:3.30.70.330:FF:000144coord: 187..290
e-value: 1.5E-49
score: 168.2
NoneNo IPR availableFUNFAMG3DSA:3.30.70.330:FF:000103coord: 103..183
e-value: 3.6E-45
score: 153.9
NoneNo IPR availableFUNFAMG3DSA:3.30.70.330:FF:000395coord: 301..423
e-value: 6.8E-59
score: 198.8
NoneNo IPR availablePANTHERPTHR47640TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATEDcoord: 80..392
NoneNo IPR availableCDDcd12344RRM1_SECp43_likecoord: 105..185
e-value: 1.54413E-43
score: 145.526
NoneNo IPR availableCDDcd12345RRM2_SECp43_likecoord: 199..278
e-value: 2.32947E-45
score: 150.496
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 199..276
e-value: 5.6E-20
score: 73.3
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 65..197
e-value: 7.0E-25
score: 89.6
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 299..426
e-value: 1.7E-26
score: 94.9
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 321..384
e-value: 1.1E-12
score: 58.9
coord: 202..271
e-value: 1.8E-10
score: 51.9
coord: 106..173
e-value: 2.7E-9
score: 48.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 104..184
score: 14.862814
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 319..391
score: 17.523457
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 200..279
score: 17.182348
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 66..184
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 198..297
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 310..420

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_004505139.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004505139.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004505139.3; organism=Cicer arietinum; type=mRNA; length=1329bp
ATGGCTCAACAAAGTAACAGTGGCGATCTGAATCAGCATCCTCAGCAGCA
ACAGCAGCAGCATCAGCAGCAACAGCCATGGGCGCAGCCGCATCAGTATC
AACAACAATGGATGTCTATGCAGTATCCTGCTACTGCTATGGCTATGATG
CAGCAACAGATGATGATGTATCCTCAGCATTACATGCCGTATGTTCATCC
TCATCATTATCAGCCGCCACATCAGCAACAGCCTTCGCCGCCTCCTCAGA
GTCATCATAACCACCATCATCACCAGCAGCAGCAGAAACAAGTCTCTCCC
GATGAGATCAAGACGATCTGGCTTGGTGACCTTCACCATTGGATGGACGA
AACTTTTCTTCATAACTGCTTTGCTCACACCGGCGAGGTTGTATCGGCCA
AGGTCATACGTAATAAGCAAACTGGTCAGTCGGAGGGATATGGATTTATT
GAGTTCTATTCGCGGGCGACGGCTGAGAAAGTCTTGCAGAACTATAATGG
TACTATGATGCCAAATACAGATCAGGCTTTTCGTCTGAATTGGGCTTCAT
TCAGCGCTGGTGGCGGTGAGAGACGTTCTTCTGATGCTACTTCTGATCTC
TCTATATTTGTGGGGGACTTGGCCATAGATGTTACTGATGCTATGCTGCA
AGAGGTGTTTGCTAGCAGATACTCATCTATTAAGGGAGCAAAAGTTGTCA
TTGATTCTAATTCTGGCCGTTCAAAAGGCTATGGTTTTGTTAGGTTTGGT
GATGAAAATGAGAGGACAAGGGCAATGACTGAAATGAATGGTGTTTATTG
TTCTAGCAGGGCGATGCGAATAGGTGTTGCAACACCCAAAAAAACTTATG
GAAATCCCCAACAATATGCCTCACAAGCTGTGGTGTTGGCTGGTGGACAC
TCATCTAATGGTGCTGTGGCCCAAGGTTCCCAATCTGAAGGGGATTCTAA
CAACACAACTATATTTGTTGGAGGGCTTGATTCTGACATCAGTGATGAGG
ATCTCAGACAACCATTTTTGCAATTTGGTGATGTTGTCTCTGTGAAGATT
CCAGTCGGTAAAGGATGTGGTTTTGTTCAACTTGCTGACAGAAAGAATGC
TGAGGACGCAATTCAAGCATTGAACGGAACAATGATTGGGAAGCAGACAG
TGCGCCTTTCTTGGGGTCGCAGTCCAGGAAATAAGCATTGGAGGAATGAT
TCTAATGGGAATCATTACGGTGGCGGTCAGGGTTATGGAGGCCATGGATA
TGGAGGTCATGGATTTGCTGCTAGACAGAATCAGGATATAGCTATGCAAC
CTGCTGCTGCAATTCAAGGTGCTTCCTAA
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protein sequence of rna-XM_004505139.3_CaCDCfrontier-NCBI_v1

>rna-XM_004505139.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004505139.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004505139.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=442bp
MAQQSNSGDLNQHPQQQQQQHQQQQPWAQPHQYQQQWMSMQYPATAMAMM
QQQMMMYPQHYMPYVHPHHYQPPHQQQPSPPPQSHHNHHHHQQQQKQVSP
DEIKTIWLGDLHHWMDETFLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFI
EFYSRATAEKVLQNYNGTMMPNTDQAFRLNWASFSAGGGERRSSDATSDL
SIFVGDLAIDVTDAMLQEVFASRYSSIKGAKVVIDSNSGRSKGYGFVRFG
DENERTRAMTEMNGVYCSSRAMRIGVATPKKTYGNPQQYASQAVVLAGGH
SSNGAVAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKI
PVGKGCGFVQLADRKNAEDAIQALNGTMIGKQTVRLSWGRSPGNKHWRND
SNGNHYGGGQGYGGHGYGGHGFAARQNQDIAMQPAAAIQGAS
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mRNA from alignment at chr6:18121520..18125895-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_004505139.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004505139.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004505139.3; organism=Cicer arietinum; type=mRNA; length=4376bp; location=Sequence derived from: chr6:18121520..18125895- (Cicer arietinum
TTGTAATTGTTGTTTTCTTTAAAACCCAACCCTATTACCATTCATTTTCC
TTTCTTCTTCTCCTTCTCTGTCTTTGTCTCTCACTCTCCTTCTCTCTGCT
AAGCTACTTGGACCATAGACCAGCTGAGAGAGAGAGAGAGAACAAAGAGT
AAAGAGACAGAGAATTAAAATCAACTTAGGCTATACTATACTTTTTCATA
TGGCTCAACAAAGTAACAGTGGCGATCTGAATCAGCATCCTCAGCAGCAA
CAGCAGCAGCATCAGCAGCAACAGCCATGGGCGCAGCCGCATCAGTATCA
ACAACAATGGATGTCTATGCAGTATCCTGCTACTGCTATGGCTATGATGC
AGCAACAGATGATGATGTATCCTCAGCATTACATGCCGTATGTTCATCCT
CATCATTATCAGCCGCCACATCAGCAACAGCCTTCGCCGCCTCCTCAGAG
TCATCATAACCACCATCATCACCAGCAGCAGCAGAAACAAGTCTCTCCCG
ATGAGATCAAGACGATCTGGCTTGGTGACCTTCACCATTGGATGGACGAA
ACTTTTCTTCATAACTGCTTTGCTCACACCGGCGAGGTTTACTCTCTCTC
TCTCTCTATTAATTAATTGTTATAGTTTGAATGTTGAAATTCAATTTGTT
AGATTTGGTTTCATAAGTTGCTTTCATTGGTTTAATTTAATATTATCAGC
ATATCTTATGATGTGAGTTTCTGTTTTATATAAATGATCTTGATTTATTT
ATTGCTGGAAGTTACTAGGGTACAATACTTCATTGTTTAATTTGCCGATT
TGACATTTTTTATTTTTGGTTGGTATTGGATTGATTCAATTCATTCATGA
GCATTTTGATTAACCAATCAAATCACGATTTGATTTCTTAAGCTATGGCC
TGAACTTTAATTTAAGTTCATTGATCTTTTCGTGTGTGAGTAGGGTTTTC
CCCTTTTCTATCCTTGGCATTGCCACTCTAAGGTAGGTCTACTTTTGGTA
CCCTATGTGGTCCCCTAGAGTCTGAAGGCTGATAACGTGAAGCTGTTGAC
CCATGTTTTTACTAGACTCTCTAGTATAACCTAGATCTATTAATTGTATT
CTGTAAAATGGGGCTAATGTAAATCATTATTTTTGTTCTCTGATGTATTT
TGAGATATTCACATGTTAAATTTGAATAGCTGACATTGACAATCAGACAT
TGCCTTTTTTGGGCATTCATGAAGAAACCTTTTTGTTTGTCATATTCTGA
TCAGCTTCTTGAAATGAGCTTGAACCAAAGTTTGTGCACTGCCAAACAAA
GGTTTTTTATGTTGTGTTGCCTTATATGCAGGTTGTATCGGCCAAGGTCA
TACGTAATAAGCAAACTGGTCAGTCGGAGGGATATGGATTTATTGAGTTC
TATTCGCGGGCGACGGCTGAGAAAGTCTTGCAGAACTATAATGGTACTAT
GATGCCAAATACAGATCAGGCTTTTCGTCTGAATTGGGCTTCATTCAGCG
CTGGTGGCGGTGAGAGACGTTCTTCTGATGCTACTTCTGATCTCTCTATA
TTTGTGGGGGACTTGGCCATAGATGTTACTGATGCTATGCTGCAAGAGGT
GTTTGCTAGCAGATACTCATCTATTAAGGGAGCAAAAGTTGTCATTGATT
CTAATTCTGGCCGTTCAAAAGGCTATGGTTTTGTTAGGTTTGGTGATGAA
AATGAGAGGACAAGGGCAATGACTGAAATGAATGGTGTTTATTGTTCTAG
CAGGGCGATGCGAATAGGTGTTGCAACACCCAAAAAAACTTATGGAAATC
CCCAACAATATGCCTCACAAGGTTTTTGTTATTTAATTGTTATCATGCTT
GCATGTGAAGTAATTTCATTATATTACACTCTGCTCTCTCAGTGTTAACT
TCTTATTTATATGGTTCCGCTTAAATCAACACCTACCTTTTCTGTTGCAG
ATACCCTAAATTTACGTTTTAACTGAAAGGAGGTCCCAGTAATTTAATTT
CCTTGCTGGCTGTTGATATTAATATCTTCTTTTAAATTACTTGTTTAATT
TGGTTTGTGCAAATTTATTTTTAAGTTGGTTAAATTGTTAATACTAACAT
GTATGATGAATAAGCTGTAACTTGTAAGTAACCTGCTTTATTTGGAAGTA
TGCTTTATATTGCTAACAGTAATCATAGTATTCAATACAAGTCCTGGAAC
TTTTTGCTGCTTAAATATATTTATCCGTATATTAAATGTCATAATGGTTT
TTGGCTTTATGCGTGAATGGACTTGTTATTTTTTGATTTTTGACAATTGC
TTATTGCTGATTTTTCTATGCTTTTTCACATCCTTATCTCTATTCCCTTG
CTTATCTCATCATGTAAATTGTTTGATGTCTGGATGACAAGTCTGTGCTT
TTTCAGCTTCAATCTATTGTTGAATGTTAGTGATATATGTTTGTATCTCT
TTACACAATTTAGAAACTTGAAAGCATAACGAGGCAGAAAAATTTGTTGT
TTATTGTATATATATTGCTGACTTTTTTCTTTCTTAAACTAGCTGTGGTG
TTGGCTGGTGGACACTCATCTAATGGTGCTGTGGCCCAAGGTTCCCAATC
TGAAGGGGATTCTAACAACACAACTGTGAGTCTGCTTTTGTAGCTTTTTA
TATCTTTTAATCAACTTGTTTTGACATCTCAGTAACGGATATCTGTTACA
GATATTTGTTGGAGGGCTTGATTCTGACATCAGTGATGAGGATCTCAGAC
AACCATTTTTGCAATTTGGTGATGTTGTCTCTGTGAAGATTCCAGTCGGT
AAAGGATGTGGTTTTGTTCAACTTGCTGACAGGTACACTTGTGGTATCCC
TTAACATAGACATAGAACTTAACTTGCTCGCGAGTTATTGCAACCCCCAT
AGCACAGTGGGTGGTTTCTGCAAAATAGACAGTGGCATAAGTATTCCTCA
AATGGGTATGGAACTAAAAAATTGTATGGAATCCTTGATTGTCCCAACTC
GTCATGGTTAAGAATCGTATAAGGACGGGGATATGACATTGAAGGAATTT
GCTGTGAACTATTGCATAGGATGATAGTGGTGATTGCTATTGCAGTTACC
ATTAGTACTGTCTTAGTACTATCACCTTAATACTATTGCTTAACAATATG
GTATTGAAAGAAATTGCTGTGAACTATATTGCATAGGTTGATATGATCGT
GATTGCTATTGCAATTATCATTAGTACTCTCTTAGTTTTGCCTGGGTGAA
TTAGCTATTTTTTTATGCCTTCTGCTCTTCTGTAACAGAAAGAATGCTGA
GGACGCAATTCAAGCATTGAACGGAACAATGATTGGGAAGCAGACAGTGC
GCCTTTCTTGGGGTCGCAGTCCAGGAAATAAGCATGTGAGTTTATTTTTC
TACTTTAAATTCAATTTATTGTTATATTTTTATCTTTTTGTCTATCTAAT
TGGAAAATTAGAGTTTCAATCTTCACATAAATGAATCCAGATTAATGTTT
TTGTGTACTCAATCTGTGAAACTATATCTTTTTTAGTGTAAGGAGTACCA
ACATCAGTGCATCACTGTATTCAGTCTTTACTGATAGTTTGTTACTTTAT
TATACTTTTTCGATTATGATGTACATCTTCTACTTACGTGCCAAATTATT
TTATGAAATTTTCCACATTCATATGCTTTCAACATGTAGTTAGTTGCTAC
AAAGAGTTGTCAATTAGCATATACACTTTTTAATTCCTTTGCAATAGATC
TTGATTATGAAGGCCCCAAAATAATGTCATACTTTTCAAGGTAGGCAGAA
ATATTATTCCCTATCAAGTTTTGCAAAATCAAGTATTTACATCATTATTG
AAATCCATTTCTAATGTAATTCCTTGGGAACTCACAGTGGAGGAATGATT
CTAATGGGAATCATTACGGTGGCGGTCAGGGTTATGGAGGCCATGGATAT
GGAGGTCATGGATTTGCTGCTAGACAGAATCAGGATATAGCTATGCAACC
TGCTGCTGCAATTCAAGGTGCTTCCTAACGGTCATAGCAGAACTGGTATT
GAAATAGGATGGATTTTATTGCTCTCTTAAGTGAACTGTAGTATTATTTT
TAAATTTGTAGCTGGGTTATATGGTACTCCAAGGTTCTTAAAGATTATAT
TAAAAGCTATGAAGTTTTGGATTGAACTCGACCATATAATATATGGCTCG
AGGTATTTTTGGTTATTTAATCGTTAGTAGGCAGCCAAGATTATTTTTAT
TATCATCTTTACACATAACAGTGTAGAAGCTTGCAAAAATTTGAAATTGA
GTGTAAAGATTGAACAATATAGAAATATTTATTTCATGTTTGATCTTAAA
AATTAATCGACGGAAAATTGAGTTTA
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Coding sequence (CDS) from alignment at chr6:18121520..18125895-

>rna-XM_004505139.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004505139.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004505139.3; organism=Cicer arietinum; type=CDS; length=1329bp; location=Sequence derived from: chr6:18121520..18125895- (Cicer arietinum
ATGGCTCAACAAAGTAACAGTGGCGATCTGAATCAGCATCCTCAGCAGCA
ACAGCAGCAGCATCAGCAGCAACAGCCATGGGCGCAGCCGCATCAGTATC
AACAACAATGGATGTCTATGCAGTATCCTGCTACTGCTATGGCTATGATG
CAGCAACAGATGATGATGTATCCTCAGCATTACATGCCGTATGTTCATCC
TCATCATTATCAGCCGCCACATCAGCAACAGCCTTCGCCGCCTCCTCAGA
GTCATCATAACCACCATCATCACCAGCAGCAGCAGAAACAAGTCTCTCCC
GATGAGATCAAGACGATCTGGCTTGGTGACCTTCACCATTGGATGGACGA
AACTTTTCTTCATAACTGCTTTGCTCACACCGGCGAGGTTGTATCGGCCA
AGGTCATACGTAATAAGCAAACTGGTCAGTCGGAGGGATATGGATTTATT
GAGTTCTATTCGCGGGCGACGGCTGAGAAAGTCTTGCAGAACTATAATGG
TACTATGATGCCAAATACAGATCAGGCTTTTCGTCTGAATTGGGCTTCAT
TCAGCGCTGGTGGCGGTGAGAGACGTTCTTCTGATGCTACTTCTGATCTC
TCTATATTTGTGGGGGACTTGGCCATAGATGTTACTGATGCTATGCTGCA
AGAGGTGTTTGCTAGCAGATACTCATCTATTAAGGGAGCAAAAGTTGTCA
TTGATTCTAATTCTGGCCGTTCAAAAGGCTATGGTTTTGTTAGGTTTGGT
GATGAAAATGAGAGGACAAGGGCAATGACTGAAATGAATGGTGTTTATTG
TTCTAGCAGGGCGATGCGAATAGGTGTTGCAACACCCAAAAAAACTTATG
GAAATCCCCAACAATATGCCTCACAAGCTGTGGTGTTGGCTGGTGGACAC
TCATCTAATGGTGCTGTGGCCCAAGGTTCCCAATCTGAAGGGGATTCTAA
CAACACAACTATATTTGTTGGAGGGCTTGATTCTGACATCAGTGATGAGG
ATCTCAGACAACCATTTTTGCAATTTGGTGATGTTGTCTCTGTGAAGATT
CCAGTCGGTAAAGGATGTGGTTTTGTTCAACTTGCTGACAGAAAGAATGC
TGAGGACGCAATTCAAGCATTGAACGGAACAATGATTGGGAAGCAGACAG
TGCGCCTTTCTTGGGGTCGCAGTCCAGGAAATAAGCATTGGAGGAATGAT
TCTAATGGGAATCATTACGGTGGCGGTCAGGGTTATGGAGGCCATGGATA
TGGAGGTCATGGATTTGCTGCTAGACAGAATCAGGATATAGCTATGCAAC
CTGCTGCTGCAATTCAAGGTGCTTCCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR035979RBD_domain_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding