rna-XM_004505155.3

Transcript Overview
Namerna-XM_004505155.3
Unique Namerna-XM_004505155.3_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length1704
Productpentatricopeptide repeat-containing protein At2g15690, mitochondrial-like
References
External references for this mRNA
DatabaseAccession
GeneID101499185
GenBankXM_004505155.3
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr6chromosomechr6:18273387..18275347 +Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascanL202Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascanL204Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cacanL202Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0433Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0439Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cacanL252Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0485Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0487Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascanL628Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cacanL315Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cacanL344Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0727Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0892Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cancanL166Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cancanR188Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cancanR194Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanL0713Cicer arietinum ICC 4958 genome v2Cicer arietinum
caicanL0969Cicer arietinum ICC 4958 genome v2Cicer arietinum
canccR0727Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR591Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canccR0906Cajanus cajan Asha genome v1.0Cajanus cajan
canccR0919Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR620Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR637Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canvrvR473Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR388Vicia faba cv. Tiffany genome v1.0Vicia faba
canvfhR406Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvrvR519Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR431Vicia faba cv. Tiffany genome v1.0Vicia faba
canvrvR524Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR453Vicia faba cv. Tiffany genome v1.0Vicia faba
canvfhR450Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cantifR468Vicia faba cv. Tiffany genome v1.0Vicia faba
canvfhR471Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvfhR486Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canpvR571Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canpvR583Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canpvR635Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvssR529Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR553Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR581Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR587Vicia sativa cv. Studenica genome v1.0Vicia sativa
canzwsR367Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR424Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canzwsR410Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canzwsR417Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR441Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR460Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuR467Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuaR489Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR531Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canpsR469Pisum sativum Cameor genome v1aPisum sativum
canpsR503Pisum sativum Cameor genome v1aPisum sativum
canpsR512Pisum sativum Cameor genome v1aPisum sativum
canpsR524Pisum sativum Cameor genome v1aPisum sativum
canpsR565Pisum sativum Cameor genome v1aPisum sativum
avjcanL249Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL519Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL630Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR409Cicer arietinum
cancarR416Cicer arietinum
cancarR443Cicer arietinum
cancarR450Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101499185gene-LOC101499185_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_004505155.3-1exon-XM_004505155.3-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_004505212.1cds-XP_004505212.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_004505155.3_CaCDCfrontier-NCBI_v1rna-XM_004505155.3_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_004505155.3_CaCDCfrontier-NCBI_v1rna-XM_004505155.3_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


Homology
[Close]
BLAST of rna-XM_004505155.3 vs. Araport11
Match: | (Symbols: BLX, DYW2 | DYW domain protein 2 | chr2:6831855-6833594 REVERSE LENGTH=579)

HSP 1 Score: 512.301 bits (1318), Expect = 8.805e-177
Identity = 285/575 (49.57%), Postives = 362/575 (62.96%), Query Frame = 0 
Query:    2 LSSSFSLKLRTNYIHGNHLCKTLSTSAIPNQYGRFPPHSQQPPSESDHT-PFHPPPQYFNNHNHFPQNTHNAPARFPQQ--GWNPQS----PNFRPPPPQNPNFRPPPPQNPNFRPSPPQNPNFQQPNSSNRLNNQNHWNPQTSPTVNPNQFQNPNNQFQNPNNQFQNPNNQFQNS--NSQFQNPNQLNERASVQEQAQPPSIVDLTRFCREGNVKEALELMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPTPPPKKYSAISMLEGRNRMIEYKNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            LSS F      N I   HL    STSA  N Y + P    Q  S S H  P+  PPQ F++     QN  N   R PQ    W+ Q     P +    PQ+   RPP       +           P             PQ      P       N  Q+  +Q+  P  Q Q     S  Q+PNQ+NE A       PPS+ ++ R C+    K+A+EL++KG   D  CF LLF+ C   KS+E +KKVHD+FLQS FR D KL+N VI M+G C S+TDA+RVFDHM +++MDSWH+M+  Y+++ MGD+AL LFE M + GL+   ET L V  AC +   +E+A+LHF+SMKN++GI P  EHY+G+L VLG+ G+L EAE++I  LPF PT    E +++YAR+HGDIDLED++EEL+V +DPSKAV NKIPTPPPK +   +M+  ++R++E++N T YKD+   K ++  K   YVPDTR+VLHDIDQEAKEQALLYHSERLAIAYG+I TPPR  L IIKNLRVCGDCHN IKIMS+I+GR LIVRDNKRFHHFKDGKCSCGDYW
Sbjct:   31 LSSQFHFSGTLNSIPIKHL----STSAAANDYHQNP----QSGSPSQHQRPY--PPQSFDS-----QNQTNTNQRVPQSPNQWSTQHGGQIPQYGGQNPQHGGQRPPYGGQNPQQGGQMSQYGGHNPQHGGHRPQYGGQRPQYG---GPGNNYQNQNVQQSNQSQYYTPQQQQQPQPPRSSNQSPNQMNEVAP------PPSVEEVMRLCQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAVINKIPTPPPKSFKETNMVTSKSRILEFRNLTFYKDEA--KEMAAKKGVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
[Close]
BLAST of rna-XM_004505155.3 vs. Araport11
Match: | (Symbols: MEF8S | MEF8 similar | chr4:15661092-15662705 FORWARD LENGTH=537)

HSP 1 Score: 302.368 bits (773), Expect = 1.312e-95
Identity = 175/468 (37.39%), Postives = 260/468 (55.56%), Query Frame = 0 
Query:  140 TVNPNQFQNPNNQF-QNPNNQFQNPNNQFQNSNSQFQNPNQLNERASV-------------------QEQAQPPSIVDLTRFCREGNVKEALELMEKGVKADANCFDL--LF---DLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPTPPPKKYSAI------SMLEGRNRMIEY---------KNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            ++NP   QNP N+F QN  N+ Q+     +  N + QN    +  +S                    Q+ +   S+ +L   CREG VK+A+E++ K  + +    DL  LF    LCG ++++++AK VH++   S   SD   +N +IEMY  C S+ DA  VF+ MP RN+++W  +IR +A +  G++A+  F    + G +   E    +  ACG    + +  LHFESM  +YGI P +EHY+ L+++L + GYL EA  F+E +   P V + ETL + +R+HGD+ L D  ++++ +LD S+          P K S +       M +G N  I Y         +N  LY   + LK    M E GYVP ++  LHD+DQE+K++ L  H+ER A     + TP R+ +R++KNLRVC DCHNA+K+MS+IVGRELI RD KRFHH KDG CSC +YW
Sbjct:   75 SLNPVSGQNPTNRFYQNGYNRNQSYGEHSEIINQRNQNWQSSDGCSSYGTTGNGVPQENNTGGNHFQQDHSGHSSLDELDSICREGKVKKAVEII-KSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESME--PNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSSDLVKEKLQRMAKGPNYGIRYMAAGDISRPENRELYMALKSLK--EHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
[Close]
BLAST of rna-XM_004505155.3 vs. Araport11
Match: | (Symbols: MEF8 | mitochondrial editing factor 8 | chr2:10888102-10889949 FORWARD LENGTH=615)

HSP 1 Score: 289.271 bits (739), Expect = 1.120e-89
Identity = 155/391 (39.64%), Postives = 231/391 (59.08%), Query Frame = 0 
Query:  201 FCREGNVKEALELMEKGVKADAN-CFDL-----LFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSK-----------AVANKIPTPPPKKYSAISMLEG-RNRMIEYK--NPTLYKDDEKLKALSGMK----EAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            FC+ G VK+AL  ++  + A  N   DL     L  +CG+++ +++AK VH     S    D   ++ ++EMY NC    +A  VF+ M  +N+++W ++IR +A +  G++A+ +F    E G     +    +  ACG    V++  LHFESM   YGI P +E Y+ L+E+    G+L EA EF+E++P  P V V ETL + +R+HG+++L D+  E++  LDP++             A+ +     KK S I  L G ++ M E++  +  L ++DE  + L  +K    E GYV +TR  LHDIDQE+KE  LL HSER+A A  ++++ PR P  +IKNLRVC DCHNA+KIMS IVGRE+I RD KRFH  K+G C+C DYW
Sbjct:  229 FCKHGKVKKALYTID--ILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFIPVKASDVEKESLKKRSGI--LHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
[Close]
BLAST of rna-XM_004505155.3 vs. Araport11
Match: | (Symbols: MEF8 | mitochondrial editing factor 8 | chr2:10888102-10889949 FORWARD LENGTH=615)

HSP 1 Score: 289.271 bits (739), Expect = 1.120e-89
Identity = 155/391 (39.64%), Postives = 231/391 (59.08%), Query Frame = 0 
Query:  201 FCREGNVKEALELMEKGVKADAN-CFDL-----LFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSK-----------AVANKIPTPPPKKYSAISMLEG-RNRMIEYK--NPTLYKDDEKLKALSGMK----EAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            FC+ G VK+AL  ++  + A  N   DL     L  +CG+++ +++AK VH     S    D   ++ ++EMY NC    +A  VF+ M  +N+++W ++IR +A +  G++A+ +F    E G     +    +  ACG    V++  LHFESM   YGI P +E Y+ L+E+    G+L EA EF+E++P  P V V ETL + +R+HG+++L D+  E++  LDP++             A+ +     KK S I  L G ++ M E++  +  L ++DE  + L  +K    E GYV +TR  LHDIDQE+KE  LL HSER+A A  ++++ PR P  +IKNLRVC DCHNA+KIMS IVGRE+I RD KRFH  K+G C+C DYW
Sbjct:  229 FCKHGKVKKALYTID--ILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFIPVKASDVEKESLKKRSGI--LHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
[Close]
BLAST of rna-XM_004505155.3 vs. Araport11
Match: | (Symbols: MEF29 | mitochondrial RNA editing factor 29 | chr4:14962617-14964995 REVERSE LENGTH=792)

HSP 1 Score: 267.314 bits (682), Expect = 1.023e-79
Identity = 150/411 (36.50%), Postives = 220/411 (53.53%), Query Frame = 0 
Query:  188 EQAQPPSIVDLTRFCREGNVKEALELMEKGVKADAN----CFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPS------------------------KAVANKIPTPPPKKYSAISMLEGRNRMI--EYKNPTLYKDDEKLKALSG-MKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            E++ P     ++ + + G  ++A+ L  +  K++ +        +   C +  ++   K VHD    + F S   +   +I MY  C S+ +ARR+FD M  +N  +W+ MI GY     G EAL +F  M   G+  T  T L VL AC  A  V++    F SM ++YG EP V+HY  ++++LG++G+L+ A +FIE +   P  +V ETL    RIH D +L   V E +  LDP                         +  A K        Y+ I + E  +     +  +P + +  EKL+ L G M+EAGY P+T   LHD+++E +E  +  HSERLAIA+GLI+T P T +RIIKNLRVC DCH   K++S+I  R ++VRD  RFHHFKDG CSCGDYW
Sbjct:  382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792

HSP 2 Score: 59.6918 bits (143), Expect = 4.797e-9
Identity = 45/195 (23.08%), Postives = 83/195 (42.56%), Query Frame = 0 
Query:  212 ELMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVE-DAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHG 405
            ELM  G +  ++    L  + G    +     +H Y L+S F S   +   +  +Y     +  AR++FD  P +++ SW+ MI GY  + + ++A+ LF  M +        T+  +LSAC    A+    ++H   +      E  +     L+ +  + G + EA    + +     VT    +  Y  +HG
Sbjct:  312 ELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVH--DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYG-LHG 500

HSP 3 Score: 54.299 bits (129), Expect = 2.313e-7
Identity = 34/123 (27.64%), Postives = 61/123 (49.59%), Query Frame = 0 
Query:  255 SDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLF-EHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLK 376
            S+  L + +++MY     + DAR+VFD MP ++   W+ MI GY  + M  E++Q+F + +NE    + + TLL +L A    + +    +   S+  K G         G + +  + G +K
Sbjct:  152 SELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLG-MQIHSLATKTGCYSHDYVLTGFISLYSKCGKIK 273
[Close]
BLAST of rna-XM_004505155.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:11246375-11247763 FORWARD LENGTH=462)

HSP 1 Score: 254.988 bits (650), Expect = 2.839e-78
Identity = 137/402 (34.08%), Postives = 224/402 (55.72%), Query Frame = 0 
Query:  201 FCREGNVKEAL----ELMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNEL-GLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPS---------------------KAVANKIPTPPPKKYSAISMLEGRNRMIEY--------KNPTLYKDDEKLKALSG-MKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            F   G  +EAL    E+  KG+K D      L   C K  ++   K+VH Y ++     +    N ++++Y  C  + +A+ +FD M ++N  SW  +I G A +  G EA++LF++M    GL     T + +L AC     V++ + +F  M+ +Y IEP +EH+  ++++L ++G +K+A E+I+ +P  P V +  TL     +HGD DL +     I++L+P+                     + +  ++     KK    S++E  NR+ E+        ++  +Y    KLK ++G ++  GYVP    V  D+++E KE A++YHSE++AIA+ LISTP R+P+ ++KNLRVC DCH AIK++S++  RE++VRD  RFHHFK+G CSC DYW
Sbjct:   64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYA---KLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462

HSP 2 Score: 72.4034 bits (176), Expect = 3.249e-13
Identity = 41/152 (26.97%), Postives = 80/152 (52.63%), Query Frame = 0 
Query:  238 VEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYM----GLLEVLGQSGYLKEAEEFIEKL 385
            V   + +H   ++S F S   + N ++ +Y NC  +  A +VFD MP +++ +W+ +I G+A +   +EAL L+  MN  G++    T++++LSAC    A     L      + Y I+ G+   +     LL++  + G ++EA+   +++
Sbjct:    4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA-----LTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 150
[Close]
BLAST of rna-XM_004505155.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:8347415-8349347 FORWARD LENGTH=606)

HSP 1 Score: 258.84 bits (660), Expect = 3.291e-78
Identity = 149/428 (34.81%), Postives = 231/428 (53.97%), Query Frame = 0 
Query:  171 NSQFQNPNQLNERASVQEQAQPPSIVDLTRFCREGNVKEALELMEKGVKA----DANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPT---PPPKKYSAISMLEGRNR-----------MIEYKN------------PTLYKDDEKLKA-LSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            +++ ++  ++  R   ++     S+V    + + G   EAL L  + V A     A  F  +   C    ++   K++H Y L+  F S+  + + +++MY  C ++  AR++FD M   +  SW  +I G+A    G EA+ LFE M   G++      +AVL+AC     V++A+ +F SM   YG+   +EHY  + ++LG++G L+EA  FI K+   PT +V  TL S   +H +++L + V E I  +D     A  +         ++  ++ L  R R            IE KN            P++ K +E LKA +  M++ GYV DT  VLHD+D+E K + L  HSERLA+A+G+I+T P T +R+ KN+R+C DCH AIK +S+I  RE+IVRDN RFHHF  G CSCGDYW
Sbjct:  181 SARIEDSERVFSRLYCRDGISWNSLV--AGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 606

HSP 2 Score: 57.7658 bits (138), Expect = 1.963e-8
Identity = 39/172 (22.67%), Postives = 79/172 (45.93%), Query Frame = 0 
Query:  238 VEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYM----GLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHG 405
            V   K++H Y ++    SD  + + +++MY     + D+ RVF  +  R+  SW+ ++ GY  +   +EAL+LF  M    ++  +    +V+ AC        A LH     + Y +  G    +     L+++  + G +K A +  +++     V+    +  +A +HG
Sbjct:  149 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHL-----ATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA-LHG 314
[Close]
BLAST of rna-XM_004505155.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:8347200-8349347 FORWARD LENGTH=715)

HSP 1 Score: 260.381 bits (664), Expect = 9.446e-78
Identity = 146/398 (36.68%), Postives = 218/398 (54.77%), Query Frame = 0 
Query:  201 FCREGNVKEALELMEKGVKA----DANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPT---PPPKKYSAISMLEGRNR-----------MIEYKN------------PTLYKDDEKLKA-LSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            + + G   EAL L  + V A     A  F  +   C    ++   K++H Y L+  F S+  + + +++MY  C ++  AR++FD M   +  SW  +I G+A    G EA+ LFE M   G++      +AVL+AC     V++A+ +F SM   YG+   +EHY  + ++LG++G L+EA  FI K+   PT +V  TL S   +H +++L + V E I  +D     A  +         ++  ++ L  R R            IE KN            P++ K +E LKA +  M++ GYV DT  VLHD+D+E K + L  HSERLA+A+G+I+T P T +R+ KN+R+C DCH AIK +S+I  RE+IVRDN RFHHF  G CSCGDYW
Sbjct:  318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715

HSP 2 Score: 57.7658 bits (138), Expect = 1.794e-8
Identity = 39/172 (22.67%), Postives = 79/172 (45.93%), Query Frame = 0 
Query:  238 VEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYM----GLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHG 405
            V   K++H Y ++    SD  + + +++MY     + D+ RVF  +  R+  SW+ ++ GY  +   +EAL+LF  M    ++  +    +V+ AC        A LH     + Y +  G    +     L+++  + G +K A +  +++     V+    +  +A +HG
Sbjct:  258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHL-----ATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA-LHG 423
[Close]
BLAST of rna-XM_004505155.3 vs. Araport11
Match: | (Symbols: SSTPR | | chr4:1221116-1223461 REVERSE LENGTH=781)

HSP 1 Score: 261.536 bits (667), Expect = 9.918e-78
Identity = 140/401 (34.91%), Postives = 219/401 (54.61%), Query Frame = 0 
Query:  198 LTRFCREGNVKEALEL---MEK-GVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPT---PPPKKYSAISMLEGRNR-----------MIEYKNPTLY---------KDDEKLKALS----GMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            +  + + G+  EAL L   ME+ G + + + F      C    ++E  K++H   ++  + +   + N ++ MY  C S+ +A  +F  M  +++ SW+ MI GY+    G+ AL+ FE M   GL+    T++AVLSAC     V+    +F +M   YG+ P  +HY  ++++LG++G L++A   ++ +PF P   +  TL   +R+HG+ +L +   + I  ++P  +    + +       ++  +  L  R R            IE +N T           + DE    L      MK+AGYV  T  VLHD+++E KE+ + YHSERLA+AYG++      P+R+IKNLRVC DCHNAIK M+RI GR +I+RDN RFHHFKDG CSCGDYW
Sbjct:  381 IAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781

HSP 2 Score: 67.0106 bits (162), Expect = 2.706e-11
Identity = 45/146 (30.82%), Postives = 70/146 (47.95%), Query Frame = 0 
Query:  261 NKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVE-DAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHG 405
            N +I  Y  C  +++A+ +FD MP R+  SW  MI GY+ S    EAL+LF  M   G  +   +  + LS C    A+E    LH   +K  Y  E G      LL +  + G ++EA +  +++     V+    +  Y+R HG
Sbjct:  347 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY--ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR-HG 489
[Close]
BLAST of rna-XM_004505155.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:11245976-11247763 FORWARD LENGTH=595)

HSP 1 Score: 256.529 bits (654), Expect = 2.106e-77
Identity = 137/402 (34.08%), Postives = 224/402 (55.72%), Query Frame = 0 
Query:  201 FCREGNVKEAL----ELMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNEL-GLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPS---------------------KAVANKIPTPPPKKYSAISMLEGRNRMIEY--------KNPTLYKDDEKLKALSG-MKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            F   G  +EAL    E+  KG+K D      L   C K  ++   K+VH Y ++     +    N ++++Y  C  + +A+ +FD M ++N  SW  +I G A +  G EA++LF++M    GL     T + +L AC     V++ + +F  M+ +Y IEP +EH+  ++++L ++G +K+A E+I+ +P  P V +  TL     +HGD DL +     I++L+P+                     + +  ++     KK    S++E  NR+ E+        ++  +Y    KLK ++G ++  GYVP    V  D+++E KE A++YHSE++AIA+ LISTP R+P+ ++KNLRVC DCH AIK++S++  RE++VRD  RFHHFK+G CSC DYW
Sbjct:  197 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYA---KLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

HSP 2 Score: 75.0998 bits (183), Expect = 5.922e-14
Identity = 44/172 (25.58%), Postives = 86/172 (50.00%), Query Frame = 0 
Query:  218 VKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYM----GLLEVLGQSGYLKEAEEFIEKL 385
            V+ D + +  L         V   + +H   ++S F S   + N ++ +Y NC  +  A +VFD MP +++ +W+ +I G+A +   +EAL L+  MN  G++    T++++LSAC    A     L      + Y I+ G+   +     LL++  + G ++EA+   +++
Sbjct:  117 VEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA-----LTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 283
[Close]
BLAST of rna-XM_004505155.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9ZQE5|PP153_ARATH (Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H66 PE=1 SV=2)

HSP 1 Score: 512.301 bits (1318), Expect = 8.400e-176
Identity = 285/575 (49.57%), Postives = 362/575 (62.96%), Query Frame = 0 
Query:    2 LSSSFSLKLRTNYIHGNHLCKTLSTSAIPNQYGRFPPHSQQPPSESDHT-PFHPPPQYFNNHNHFPQNTHNAPARFPQQ--GWNPQS----PNFRPPPPQNPNFRPPPPQNPNFRPSPPQNPNFQQPNSSNRLNNQNHWNPQTSPTVNPNQFQNPNNQFQNPNNQFQNPNNQFQNS--NSQFQNPNQLNERASVQEQAQPPSIVDLTRFCREGNVKEALELMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPTPPPKKYSAISMLEGRNRMIEYKNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            LSS F      N I   HL    STSA  N Y + P    Q  S S H  P+  PPQ F++     QN  N   R PQ    W+ Q     P +    PQ+   RPP       +           P             PQ      P       N  Q+  +Q+  P  Q Q     S  Q+PNQ+NE A       PPS+ ++ R C+    K+A+EL++KG   D  CF LLF+ C   KS+E +KKVHD+FLQS FR D KL+N VI M+G C S+TDA+RVFDHM +++MDSWH+M+  Y+++ MGD+AL LFE M + GL+   ET L V  AC +   +E+A+LHF+SMKN++GI P  EHY+G+L VLG+ G+L EAE++I  LPF PT    E +++YAR+HGDIDLED++EEL+V +DPSKAV NKIPTPPPK +   +M+  ++R++E++N T YKD+   K ++  K   YVPDTR+VLHDIDQEAKEQALLYHSERLAIAYG+I TPPR  L IIKNLRVCGDCHN IKIMS+I+GR LIVRDNKRFHHFKDGKCSCGDYW
Sbjct:   31 LSSQFHFSGTLNSIPIKHL----STSAAANDYHQNP----QSGSPSQHQRPY--PPQSFDS-----QNQTNTNQRVPQSPNQWSTQHGGQIPQYGGQNPQHGGQRPPYGGQNPQQGGQMSQYGGHNPQHGGHRPQYGGQRPQYG---GPGNNYQNQNVQQSNQSQYYTPQQQQQPQPPRSSNQSPNQMNEVAP------PPSVEEVMRLCQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAVINKIPTPPPKSFKETNMVTSKSRILEFRNLTFYKDEA--KEMAAKKGVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
[Close]
BLAST of rna-XM_004505155.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SUU7|PP346_ARATH (Pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H63 PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.259e-94
Identity = 175/468 (37.39%), Postives = 260/468 (55.56%), Query Frame = 0 
Query:  140 TVNPNQFQNPNNQF-QNPNNQFQNPNNQFQNSNSQFQNPNQLNERASV-------------------QEQAQPPSIVDLTRFCREGNVKEALELMEKGVKADANCFDL--LF---DLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPTPPPKKYSAI------SMLEGRNRMIEY---------KNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            ++NP   QNP N+F QN  N+ Q+     +  N + QN    +  +S                    Q+ +   S+ +L   CREG VK+A+E++ K  + +    DL  LF    LCG ++++++AK VH++   S   SD   +N +IEMY  C S+ DA  VF+ MP RN+++W  +IR +A +  G++A+  F    + G +   E    +  ACG    + +  LHFESM  +YGI P +EHY+ L+++L + GYL EA  F+E +   P V + ETL + +R+HGD+ L D  ++++ +LD S+          P K S +       M +G N  I Y         +N  LY   + LK    M E GYVP ++  LHD+DQE+K++ L  H+ER A     + TP R+ +R++KNLRVC DCHNA+K+MS+IVGRELI RD KRFHH KDG CSC +YW
Sbjct:   75 SLNPVSGQNPTNRFYQNGYNRNQSYGEHSEIINQRNQNWQSSDGCSSYGTTGNGVPQENNTGGNHFQQDHSGHSSLDELDSICREGKVKKAVEII-KSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESME--PNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSSDLVKEKLQRMAKGPNYGIRYMAAGDISRPENRELYMALKSLK--EHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
[Close]
BLAST of rna-XM_004505155.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q680H3|PP170_ARATH (Pentatricopeptide repeat-containing protein At2g25580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H75 PE=2 SV=2)

HSP 1 Score: 289.271 bits (739), Expect = 1.078e-88
Identity = 155/391 (39.64%), Postives = 231/391 (59.08%), Query Frame = 0 
Query:  201 FCREGNVKEALELMEKGVKADAN-CFDL-----LFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSK-----------AVANKIPTPPPKKYSAISMLEG-RNRMIEYK--NPTLYKDDEKLKALSGMK----EAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            FC+ G VK+AL  ++  + A  N   DL     L  +CG+++ +++AK VH     S    D   ++ ++EMY NC    +A  VF+ M  +N+++W ++IR +A +  G++A+ +F    E G     +    +  ACG    V++  LHFESM   YGI P +E Y+ L+E+    G+L EA EF+E++P  P V V ETL + +R+HG+++L D+  E++  LDP++             A+ +     KK S I  L G ++ M E++  +  L ++DE  + L  +K    E GYV +TR  LHDIDQE+KE  LL HSER+A A  ++++ PR P  +IKNLRVC DCHNA+KIMS IVGRE+I RD KRFH  K+G C+C DYW
Sbjct:  229 FCKHGKVKKALYTID--ILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFIPVKASDVEKESLKKRSGI--LHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
[Close]
BLAST of rna-XM_004505155.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SUH6|PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 9.909e-79
Identity = 150/411 (36.50%), Postives = 220/411 (53.53%), Query Frame = 0 
Query:  188 EQAQPPSIVDLTRFCREGNVKEALELMEKGVKADAN----CFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPS------------------------KAVANKIPTPPPKKYSAISMLEGRNRMI--EYKNPTLYKDDEKLKALSG-MKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            E++ P     ++ + + G  ++A+ L  +  K++ +        +   C +  ++   K VHD    + F S   +   +I MY  C S+ +ARR+FD M  +N  +W+ MI GY     G EAL +F  M   G+  T  T L VL AC  A  V++    F SM ++YG EP V+HY  ++++LG++G+L+ A +FIE +   P  +V ETL    RIH D +L   V E +  LDP                         +  A K        Y+ I + E  +     +  +P + +  EKL+ L G M+EAGY P+T   LHD+++E +E  +  HSERLAIA+GLI+T P T +RIIKNLRVC DCH   K++S+I  R ++VRD  RFHHFKDG CSCGDYW
Sbjct:  382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792

HSP 2 Score: 59.6918 bits (143), Expect = 4.729e-8
Identity = 45/195 (23.08%), Postives = 83/195 (42.56%), Query Frame = 0 
Query:  212 ELMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVE-DAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHG 405
            ELM  G +  ++    L  + G    +     +H Y L+S F S   +   +  +Y     +  AR++FD  P +++ SW+ MI GY  + + ++A+ LF  M +        T+  +LSAC    A+    ++H   +      E  +     L+ +  + G + EA    + +     VT    +  Y  +HG
Sbjct:  312 ELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVH--DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYG-LHG 500
[Close]
BLAST of rna-XM_004505155.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LW63|PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 9.137e-77
Identity = 146/398 (36.68%), Postives = 218/398 (54.77%), Query Frame = 0 
Query:  201 FCREGNVKEALELMEKGVKA----DANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPT---PPPKKYSAISMLEGRNR-----------MIEYKN------------PTLYKDDEKLKA-LSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            + + G   EAL L  + V A     A  F  +   C    ++   K++H Y L+  F S+  + + +++MY  C ++  AR++FD M   +  SW  +I G+A    G EA+ LFE M   G++      +AVL+AC     V++A+ +F SM   YG+   +EHY  + ++LG++G L+EA  FI K+   PT +V  TL S   +H +++L + V E I  +D     A  +         ++  ++ L  R R            IE KN            P++ K +E LKA +  M++ GYV DT  VLHD+D+E K + L  HSERLA+A+G+I+T P T +R+ KN+R+C DCH AIK +S+I  RE+IVRDN RFHHF  G CSCGDYW
Sbjct:  318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715

HSP 2 Score: 57.7658 bits (138), Expect = 1.769e-7
Identity = 39/172 (22.67%), Postives = 79/172 (45.93%), Query Frame = 0 
Query:  238 VEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYM----GLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHG 405
            V   K++H Y ++    SD  + + +++MY     + D+ RVF  +  R+  SW+ ++ GY  +   +EAL+LF  M    ++  +    +V+ AC        A LH     + Y +  G    +     L+++  + G +K A +  +++     V+    +  +A +HG
Sbjct:  258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHL-----ATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA-LHG 423
[Close]
BLAST of rna-XM_004505155.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SY02|PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 9.613e-77
Identity = 140/401 (34.91%), Postives = 219/401 (54.61%), Query Frame = 0 
Query:  198 LTRFCREGNVKEALEL---MEK-GVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPT---PPPKKYSAISMLEGRNR-----------MIEYKNPTLY---------KDDEKLKALS----GMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            +  + + G+  EAL L   ME+ G + + + F      C    ++E  K++H   ++  + +   + N ++ MY  C S+ +A  +F  M  +++ SW+ MI GY+    G+ AL+ FE M   GL+    T++AVLSAC     V+    +F +M   YG+ P  +HY  ++++LG++G L++A   ++ +PF P   +  TL   +R+HG+ +L +   + I  ++P  +    + +       ++  +  L  R R            IE +N T           + DE    L      MK+AGYV  T  VLHD+++E KE+ + YHSERLA+AYG++      P+R+IKNLRVC DCHNAIK M+RI GR +I+RDN RFHHFKDG CSCGDYW
Sbjct:  381 IAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781

HSP 2 Score: 67.0106 bits (162), Expect = 2.666e-10
Identity = 45/146 (30.82%), Postives = 70/146 (47.95%), Query Frame = 0 
Query:  261 NKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVE-DAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHG 405
            N +I  Y  C  +++A+ +FD MP R+  SW  MI GY+ S    EAL+LF  M   G  +   +  + LS C    A+E    LH   +K  Y  E G      LL +  + G ++EA +  +++     V+    +  Y+R HG
Sbjct:  347 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY--ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR-HG 489
[Close]
BLAST of rna-XM_004505155.3 vs. UniProtKB/Swiss-Prot
Match: sp|A8MQA3|PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 256.529 bits (654), Expect = 2.030e-76
Identity = 137/402 (34.08%), Postives = 224/402 (55.72%), Query Frame = 0 
Query:  201 FCREGNVKEAL----ELMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNEL-GLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPS---------------------KAVANKIPTPPPKKYSAISMLEGRNRMIEY--------KNPTLYKDDEKLKALSG-MKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            F   G  +EAL    E+  KG+K D      L   C K  ++   K+VH Y ++     +    N ++++Y  C  + +A+ +FD M ++N  SW  +I G A +  G EA++LF++M    GL     T + +L AC     V++ + +F  M+ +Y IEP +EH+  ++++L ++G +K+A E+I+ +P  P V +  TL     +HGD DL +     I++L+P+                     + +  ++     KK    S++E  NR+ E+        ++  +Y    KLK ++G ++  GYVP    V  D+++E KE A++YHSE++AIA+ LISTP R+P+ ++KNLRVC DCH AIK++S++  RE++VRD  RFHHFK+G CSC DYW
Sbjct:  197 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYA---KLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

HSP 2 Score: 75.0998 bits (183), Expect = 5.831e-13
Identity = 44/172 (25.58%), Postives = 86/172 (50.00%), Query Frame = 0 
Query:  218 VKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYM----GLLEVLGQSGYLKEAEEFIEKL 385
            V+ D + +  L         V   + +H   ++S F S   + N ++ +Y NC  +  A +VFD MP +++ +W+ +I G+A +   +EAL L+  MN  G++    T++++LSAC    A     L      + Y I+ G+   +     LL++  + G ++EA+   +++
Sbjct:  117 VEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA-----LTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 283
[Close]
BLAST of rna-XM_004505155.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LIQ7|PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 1.160e-75
Identity = 139/396 (35.10%), Postives = 220/396 (55.56%), Query Frame = 0 
Query:  203 REGNVKEALEL----MEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDP---------------------SKAVANKIPTPPPKKYSAISMLEGRNRM-IEYKNPTLYKDDEKL-----KALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            R    ++ALEL    +  G +     +  LF  C  +  +E  K VH Y ++S  +      N +++MY    S+ DAR++FD +  R++ SW+ ++  YA    G EA+  FE M  +G+     + L+VL+AC  +  +++ + ++E MK K GI P   HY+ ++++LG++G L  A  FIE++P  PT  + + L +  R+H + +L  +  E +  LDP                     +  V  K+     KK  A S +E  N + +   N   +   E++     + L+ +KE GYVPDT +V+  +DQ+ +E  L YHSE++A+A+ L++TPP + + I KN+RVCGDCH AIK+ S++VGRE+IVRD  RFHHFKDG CSC DYW
Sbjct:  239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK-KDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633

HSP 2 Score: 77.0258 bits (188), Expect = 1.514e-13
Identity = 52/188 (27.66%), Postives = 84/188 (44.68%), Query Frame = 0 
Query:  218 VKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHG 405
            + AD   ++ L   C   K +   + VH + LQS FR D  + N ++ MY  C S+ +AR+VF+ MP R+  +W  +I GY+      +AL  F  M   G      TL +V+ A  +AE              K G +  V     LL++  + G + +A+   + L     V+    +  +AR  G
Sbjct:   56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA-AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242

HSP 3 Score: 63.1586 bits (152), Expect = 4.312e-9
Identity = 44/168 (26.19%), Postives = 88/168 (52.38%), Query Frame = 0 
Query:  243 KVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDA-YLHFESMKNKYGIEPG--VEHYMG--LLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHG 405
            ++H + ++  F S+  + + ++++Y     M DA+ VFD + +RN  SW+ +I G+A  +  ++AL+LF+ M   G   +  +  ++  AC S   +E   ++H       Y I+ G  +  + G  LL++  +SG + +A +  ++L     V+    L +YA+ HG
Sbjct:  182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVH------AYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ-HG 342
[Close]
BLAST of rna-XM_004505155.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SMZ2|PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.582e-74
Identity = 135/358 (37.71%), Postives = 207/358 (57.82%), Query Frame = 0 
Query:  237 SVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPT---PPPKKYS----AISMLEGRN-------RMIEYKNPT--LYKDDE----------KLK-ALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            ++E  +++H   L+    +D  +   +++MY  C S+ DA  +F  +   N+ +W+ M+ G A    G E LQLF+ M  LG++    T + VLSAC  +  V +AY H  SM   YGI+P +EHY  L + LG++G +K+AE  IE +    + ++  TL +  R+ GD +    V   ++ L+P  + A  + +       K+     A +M++G           IE KN       DD           K+K  +  +K+ GYVP+T + L D+++E KE+AL YHSE+LA+A+GL+STPP TP+R+IKNLRVCGDCHNA+K ++++  RE+++RD  RFH FKDG CSCGDYW
Sbjct:  633 ALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990

HSP 2 Score: 61.6178 bits (148), Expect = 1.314e-8
Identity = 48/151 (31.79%), Postives = 74/151 (49.01%), Query Frame = 0 
Query:  259 LHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMG-----DEALQLFEHMNELGLEITSETLLAVLSAC---GSAEAVEDAYLHFESMKNKYGIEPGVEHYMG-LLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSY 400
            L N +I MY  C S+T ARRVFD MP+R++ SW+ ++  YA S+        +A  LF  + +  +  +  TL  +L  C   G   A E     F     K G++ G E   G L+ +  + G +KE +   E++P+   V     LK+Y
Sbjct:   76 LINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES----FHGYACKIGLD-GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221

HSP 3 Score: 58.5362 bits (140), Expect = 1.374e-7
Identity = 40/142 (28.17%), Postives = 65/142 (45.77%), Query Frame = 0 
Query:  198 LTRFCREGNVKEALELMEKGVKADANC----FDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGS 335
            L+ +   G     L+     V++D  C    F L+     K  S+   ++VH   L+        + N +I MY   +    AR VFD+M  R++ SW+ +I G A + +  EA+ LF  +   GL+    T+ +VL A  S
Sbjct:  287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS 428
[Close]
BLAST of rna-XM_004505155.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SZT8|PP354_ARATH (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 3.613e-72
Identity = 132/366 (36.07%), Postives = 199/366 (54.37%), Query Frame = 0 
Query:  232 CGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNEL-GLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKA---------------------VANKIPTPPPKKYSAISMLEGRNRMIEY--------KNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            C +  ++E  + +H +   S  R + K+   +I+MY  C S+ +A  VF+  P +++ +W+ MI GYA      +AL+LF  M  + GL+ T  T +  L AC  A  V +    FESM  +YGI+P +EHY  L+ +LG++G LK A E I+ +       +  ++    ++HGD  L   + E ++ L+   +                     V N +      K   IS +E  N++ E+        K+  +Y    K+     +K  GYVP+T  VL D+++  KEQ+L  HSERLAIAYGLIST P +PL+I KNLRVC DCH   K++S+I GR++++RD  RFHHF DG CSCGD+W
Sbjct:  269 CSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKIS--ERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632

HSP 2 Score: 62.3882 bits (150), Expect = 7.246e-9
Identity = 55/195 (28.21%), Postives = 90/195 (46.15%), Query Frame = 0 
Query:  213 LMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSE-TLLAVLSACGSAEAVEDA-YLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHG 405
            +++ G+  D      L D+  K   V  A+KV D   + +  S       +I  Y    ++  AR +FD M  R++ SW++MI GYA     ++AL LF+ +   G     E T++A LSAC    A+E   ++H     ++  I   V+   GL+++  + G L+EA       P    V     +  YA +HG
Sbjct:  152 VLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSS----TAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSR--IRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYA-MHG 339
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BLAST of rna-XM_004505155.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YIT7|A0A1S2YIT7_CICAR (Pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like OS=Cicer arietinum OX=3827 GN=LOC101499185 PE=3 SV=1)

HSP 1 Score: 1184.09 bits (3062), Expect = 0.000e+0
Identity = 567/567 (100.00%), Postives = 567/567 (100.00%), Query Frame = 0 
Query:    1 MLSSSFSLKLRTNYIHGNHLCKTLSTSAIPNQYGRFPPHSQQPPSESDHTPFHPPPQYFNNHNHFPQNTHNAPARFPQQGWNPQSPNFRPPPPQNPNFRPPPPQNPNFRPSPPQNPNFQQPNSSNRLNNQNHWNPQTSPTVNPNQFQNPNNQFQNPNNQFQNPNNQFQNSNSQFQNPNQLNERASVQEQAQPPSIVDLTRFCREGNVKEALELMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPTPPPKKYSAISMLEGRNRMIEYKNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            MLSSSFSLKLRTNYIHGNHLCKTLSTSAIPNQYGRFPPHSQQPPSESDHTPFHPPPQYFNNHNHFPQNTHNAPARFPQQGWNPQSPNFRPPPPQNPNFRPPPPQNPNFRPSPPQNPNFQQPNSSNRLNNQNHWNPQTSPTVNPNQFQNPNNQFQNPNNQFQNPNNQFQNSNSQFQNPNQLNERASVQEQAQPPSIVDLTRFCREGNVKEALELMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPTPPPKKYSAISMLEGRNRMIEYKNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct:    1 MLSSSFSLKLRTNYIHGNHLCKTLSTSAIPNQYGRFPPHSQQPPSESDHTPFHPPPQYFNNHNHFPQNTHNAPARFPQQGWNPQSPNFRPPPPQNPNFRPPPPQNPNFRPSPPQNPNFQQPNSSNRLNNQNHWNPQTSPTVNPNQFQNPNNQFQNPNNQFQNPNNQFQNSNSQFQNPNQLNERASVQEQAQPPSIVDLTRFCREGNVKEALELMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPTPPPKKYSAISMLEGRNRMIEYKNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
[Close]
BLAST of rna-XM_004505155.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YIY7|A0A1S2YIY7_CICAR (Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Cicer arietinum OX=3827 GN=LOC101498190 PE=3 SV=1)

HSP 1 Score: 1006.13 bits (2600), Expect = 0.000e+0
Identity = 522/568 (91.90%), Postives = 535/568 (94.19%), Query Frame = 0 
Query:    1 MLSSSFSLKLRTNYIHGNHLCKTLSTSAIPNQYGRFPPHSQQPPSESDHTPFHPPP-QYFNNHNHFPQNTHNAPARFPQQGWNPQSPNFRPPPPQNPNFRPPPPQNPNFRPSPPQNPNFQQPNSSNRLNNQNHWNPQTSPTVNPNQFQNPNNQFQNPNNQFQNPNNQFQNSNSQFQNPNQLNERASVQEQAQPPSIVDLTRFCREGNVKEALELMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPTPPPKKYSAISMLEGRNRMIEYKNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            MLSSSFSL LRTNY +GN+LC+TLSTSAIPN+YGRF P SQQP   SDHTPFHPPP QYFNNHN+FPQNT+NAPARFPQQ WNPQ+P   P   QNPNFRPPPPQNPNFR  P QNPNFQQPNS NR NN N WNPQTSP+ NP+QFQNPN+QFQ+PNNQFQN        N+QFQNPNQLN RASVQEQAQPPSIVDLTRFCREG VKEALELMEKGVKADA+CFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPTPPPKKYSAISMLEGRNRMIEYKNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct:   12 MLSSSFSLNLRTNYFYGNNLCRTLSTSAIPNEYGRFLPQSQQP--HSDHTPFHPPPPQYFNNHNNFPQNTNNAPARFPQQRWNPQNPPQPP---QNPNFRPPPPQNPNFRQPPSQNPNFQQPNSPNRWNNPNKWNPQTSPSGNPDQFQNPNHQFQHPNNQFQN-------PNNQFQNPNQLNGRASVQEQAQPPSIVDLTRFCREGKVKEALELMEKGVKADASCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPTPPPKKYSAISMLEGRNRMIEYKNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
[Close]
BLAST of rna-XM_004505155.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4ZYA0|A0A9D4ZYA0_PEA (DYW domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_073187 PE=3 SV=1)

HSP 1 Score: 871.307 bits (2250), Expect = 0.000e+0
Identity = 460/570 (80.70%), Postives = 489/570 (85.79%), Query Frame = 0 
Query:    1 MLSSSFSLKLRTNYIHGNHLCKTLSTSAIPNQYGRFPPHSQQPPSESDHTPFHPPPQYFNNHNHFPQNTHNAP-ARFP-QQGWNPQSPNFRPPPPQNPNFRPPPPQNPNFRPSPP-QNPNFQQPNSSNRLNNQNHWNPQTSPTVNPNQFQNPNNQFQNPNNQFQNPNNQFQNSNSQFQNPNQLNERASVQEQAQPPSIVDLTRFCREGNVKEALELMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPTPPPKKYSAISMLEGRNRMIEYKNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            MLSSSFSLKLRTN+ +GN+ CKTLSTSA+PN YGRFP   QQ PS+ + TPF PPPQ+FN+HN FP + HNA   RFP QQ WNPQ+    P   QNPNFRP PP        P  QNPNFQ P+S NR NNQN  NPQ+                           NQFQN N+QFQNPNQLNER SVQEQA PPSIVDLTRFC EG VKEALELMEKGVKADANCF+LLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEM+GNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGD+ LQLFE MN+LGLEITSETLLAVLSAC SAEAVEDAYLHFE+MK+KYGIEPGVEHYMGLL+VLGQSGYL+EA EFI+ LPF PTVTVLETLKS+AR+HGDIDLEDHVEELIV LDPSKAVANKIPTPPPKKY+AISML+GRNR++EYKNPTLYKDDEKLKALS MK+AGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct:   14 MLSSSFSLKLRTNFAYGNYFCKTLSTSALPNDYGRFPHQPQQQPSDRN-TPFPPPPQHFNHHNQFPHDNHNAQQGRFPPQQAWNPQNRPPPPHHHQNPNFRPQPPPQNPNFGQPTSQNPNFQSPSSPNRWNNQNQLNPQSGHP------------------------NQFQNPNNQFQNPNQLNERGSVQEQALPPSIVDLTRFCSEGKVKEALELMEKGVKADANCFELLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMFGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDDGLQLFEQMNDLGLEITSETLLAVLSACASAEAVEDAYLHFETMKSKYGIEPGVEHYMGLLDVLGQSGYLEEAGEFIKNLPFEPTVTVLETLKSFARLHGDIDLEDHVEELIVSLDPSKAVANKIPTPPPKKYTAISMLDGRNRIVEYKNPTLYKDDEKLKALSSMKDAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 558
[Close]
BLAST of rna-XM_004505155.3 vs. UniProtKB/TrEMBL
Match: tr|G7JL98|G7JL98_MEDTR (PPR containing plant-like protein OS=Medicago truncatula OX=3880 GN=11445976 PE=3 SV=1)

HSP 1 Score: 856.67 bits (2212), Expect = 0.000e+0
Identity = 447/596 (75.00%), Postives = 472/596 (79.19%), Query Frame = 0 
Query:    8 LKLRTNYIHGNHLCKTLSTSAIPNQYGRFPPHS-QQPPSESDHTPFHPPPQYFNNHNHFPQNTHNAPARFPQQGWNPQSPNFRPPPPQNPNFRPPPPQNPN-FRPSPP---------------------------------QNPNFQQPNSSNRLNNQNHWNPQTSPTVNPNQFQNPNNQFQNPNNQFQNPNNQFQNSNSQFQNPNQLNERASVQEQAQPP-SIVDLTRFCREGNVKEALELMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPTPPPKKYSAISMLEGRNRMIEYKNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            LKLR+NYIHGNH CKTLSTSAIPN+YGR PPH  QQPPS  DH       Q+FN+HN     T NAP RFPQQ WNPQ          NPNFRPP P     +R  PP                                 QNPNFQ PN  NR  NQN WNPQ     N NQFQNPNN                     QFQ PN       VQEQA PP SIVDLTRFC+EG VKEALELMEKG+KADANCF++LFDLCGKSKSVEDAKKVHDYFLQSTFRSDFK+HNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDE LQLFE MNELGLEITSET+LAVLSACGSAEAVEDAY++ ESMK+KYGIEPGVEHYMGLL+VLGQSGYLKEAEEFIE+LPF PTVTV ETLK+YARIHGD+DLEDHVEELIV LDPSKAVANKIPTPPPKKY+AISML+G+NR+IEYKNPTLYKDDEKL A++ MK+AGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct:   24 LKLRSNYIHGNHFCKTLSTSAIPNEYGRLPPHQVQQPPS--DHN------QHFNHHN-----TQNAPGRFPQQDWNPQ----------NPNFRPPQPPQNPNYRQQPPPQNPNFRPPPPPQNPNFRPPPPPQNPNFRQPIRQNPNFQPPNGPNRGINQNQWNPQNG---NLNQFQNPNN---------------------QFQTPN-------VQEQAPPPPSIVDLTRFCQEGKVKEALELMEKGIKADANCFEILFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKMHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEGLQLFEQMNELGLEITSETMLAVLSACGSAEAVEDAYIYLESMKSKYGIEPGVEHYMGLLDVLGQSGYLKEAEEFIEQLPFEPTVTVFETLKNYARIHGDVDLEDHVEELIVSLDPSKAVANKIPTPPPKKYTAISMLDGKNRIIEYKNPTLYKDDEKLIAMNSMKDAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
[Close]
BLAST of rna-XM_004505155.3 vs. UniProtKB/TrEMBL
Match: tr|I3SQG0|I3SQG0_MEDTR (DYW domain-containing protein OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 856.284 bits (2211), Expect = 0.000e+0
Identity = 447/596 (75.00%), Postives = 472/596 (79.19%), Query Frame = 0 
Query:    8 LKLRTNYIHGNHLCKTLSTSAIPNQYGRFPPHS-QQPPSESDHTPFHPPPQYFNNHNHFPQNTHNAPARFPQQGWNPQSPNFRPPPPQNPNFRPPPPQNPN-FRPSPP---------------------------------QNPNFQQPNSSNRLNNQNHWNPQTSPTVNPNQFQNPNNQFQNPNNQFQNPNNQFQNSNSQFQNPNQLNERASVQEQAQPP-SIVDLTRFCREGNVKEALELMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPTPPPKKYSAISMLEGRNRMIEYKNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            LKLR+NYIHGNH CKTLSTSAIPN+YGR PPH  QQPPS  DH       Q+FN+HN     T NAP RFPQQ WNPQ          NPNFRPP P     +R  PP                                 QNPNFQ PN  NR  NQN WNPQ     N NQFQNPNN                     QFQ PN       VQEQA PP SIVDLTRFC+EG VKEALELMEKG+KADANCF++LFDLCGKSKSVEDAKKVHDYFLQSTFRSDFK+HNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDE LQLFE MNELGLEITSET+LAVLSACGSAEAVEDAY++ ESMK+KYGIEPGVEHYMGLL+VLGQSGYLKEAEEFIE+LPF PTVTV ETLK+YARIHGD+DLEDHVEELIV LDPSKAVANKIPTPPPKKY+AISML+G+NR+IEYKNPTLYKDDEKL A++ MK+AGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct:   24 LKLRSNYIHGNHFCKTLSTSAIPNEYGRLPPHRVQQPPS--DHN------QHFNHHN-----TQNAPGRFPQQDWNPQ----------NPNFRPPQPPQNPNYRQQPPPQNPNFRPPPPPQNPNFRPPPPPQNPNFRQPIRQNPNFQPPNGPNRGINQNQWNPQNG---NLNQFQNPNN---------------------QFQTPN-------VQEQAPPPPSIVDLTRFCQEGKVKEALELMEKGIKADANCFEILFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKMHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEGLQLFEQMNELGLEITSETMLAVLSACGSAEAVEDAYIYLESMKSKYGIEPGVEHYMGLLDVLGQSGYLKEAEEFIEQLPFEPTVTVFETLKNYARIHGDVDLEDHVEELIVSLDPSKAVANKIPTPPPKKYTAISMLDGKNRIIEYKNPTLYKDDEKLIAMNSMKDAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
[Close]
BLAST of rna-XM_004505155.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3N965|A0A2K3N965_TRIPR (Pentatricopeptide repeat-containing protein OS=Trifolium pratense OX=57577 GN=L195_g022858 PE=3 SV=1)

HSP 1 Score: 836.639 bits (2160), Expect = 0.000e+0
Identity = 457/571 (80.04%), Postives = 485/571 (84.94%), Query Frame = 0 
Query:    3 SSSFSLKLRTNYIHGN-HLCKTLSTSAIPNQYGRFPPHSQQPPSESDHTPFHPPPQYFNNHNHFPQNTHNAP---ARFP-QQGWNPQSPNFRPPPPQNPNFRPPPPQNPNFRPSPPQNPNFQQPNSSNRLNNQNHWNPQTSPTVNPNQFQNPNNQFQNPNNQFQNPNNQFQNSNSQFQNPNQLNERASVQEQAQPP-SIVDLTRFCREGNVKEALELMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPTPPPKKYSAISMLEGRNRMIEYKNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            +S  S KLRTNYI+GN + CKTLSTSAIPN+YGRF  H  QPPS+ ++TPF PP Q+FN+HN FP + +N      RFP QQGWNPQ+        QNPNFRPPP QNPNFRP   QNPNFQ PNS NR                 +  QN  N      NQFQNPNNQFQN N+QFQNPNQLNER SVQEQA PP SIVDL RFCREG VKEALELMEKG+KADA+CF+LLF+LCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANST+GDE LQLFE MNELGLEITSETLLAVLSAC SAEAVED Y++ ESMK+KYGIEPGVEHYMGLL+VLGQSGYLKEAEEFIE LPF PTVTV+ETLKSYARIHGDIDLEDHVEELI  LDPSKAV NK PTPPPKKY+AISML+GRNR+IEYKNPT YKDDEKLKALS MK+AGY PD R VLHDID EAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct:   12 TSMLSSKLRTNYIYGNNYFCKTLSTSAIPNEYGRFS-HQPQPPSDHNNTPFQPPQQHFNHHNQFPNHNNNQNVQQGRFPPQQGWNPQNRPPP----QNPNFRPPPSQNPNFRPPIRQNPNFQPPNSPNR-----------------SNNQNQWNPQNGNPNQFQNPNNQFQNPNNQFQNPNQLNERGSVQEQAPPPPSIVDLIRFCREGKVKEALELMEKGIKADADCFNLLFELCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTLGDEGLQLFEQMNELGLEITSETLLAVLSACASAEAVEDGYIYLESMKSKYGIEPGVEHYMGLLDVLGQSGYLKEAEEFIENLPFEPTVTVMETLKSYARIHGDIDLEDHVEELIASLDPSKAVVNKFPTPPPKKYTAISMLDGRNRIIEYKNPTFYKDDEKLKALSSMKDAGYSPDIRCVLHDIDPEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 560
[Close]
BLAST of rna-XM_004505155.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3PET2|A0A2K3PET2_TRIPR (DYW domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g010469 PE=3 SV=1)

HSP 1 Score: 812.372 bits (2097), Expect = 0.000e+0
Identity = 443/571 (77.58%), Postives = 472/571 (82.66%), Query Frame = 0 
Query:    3 SSSFSLKLRTNYIHGN--HLCKTLSTSAIPNQYGRFPPHSQQPPSESDHTPFHPPPQYFNNHNHFPQNTHNAPARFP-QQGWNPQSPNFRPPPPQNPNFR--PPPPQNPNFRPSPPQNPNFQQPNSSNRLNNQNHWNPQTSPTVNPNQFQNPNNQFQNPNNQFQNPNNQFQNSNSQFQNPNQLNERASVQEQAQPP-SIVDLTRFCREGNVKEALELMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPTPPPKKYSAISMLEGRNRMIEYKNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            ++  S KLRTNYI+GN  H CKTLSTSAIPN+YGRFP  +Q PPS  ++TP   P Q+FN   H+ QN      RFP QQGWNPQ+        QNPNFR  PPP QNP+FRP   QNPNFQ PN+ NR NNQN W+       NPNQFQNPN                     SQFQNP     + SVQEQ+ PP SIVDL RFCREG VKEALELMEKG+KADA+CF+LLF+LCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANST+GDE LQLFE MNELGLEITSETLLAVLSAC SAEAVED Y++ ESMK+KYGIEPGVEHYMGLL+VLGQSGYLKEAEEFIE LPF PTVTV+ETLKSYARIHGDIDLEDHVEELI  LDPSKAV NK PTPPPKKY+AISML+GRNR+IEYKNPT YKDDEKLKALS MK+AGY PD R VLHDID EAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct:   12 TTMLSFKLRTNYIYGNNNHFCKTLSTSAIPNEYGRFP--NQPPPSHHNNTP---PQQHFN---HYNQNVQQG--RFPPQQGWNPQNRPPP----QNPNFRQQPPPSQNPHFRPPIRQNPNFQPPNNPNRSNNQNQWS-------NPNQFQNPN---------------------SQFQNP-----KDSVQEQSPPPPSIVDLIRFCREGKVKEALELMEKGIKADADCFNLLFELCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTLGDEGLQLFEQMNELGLEITSETLLAVLSACASAEAVEDGYIYLESMKSKYGIEPGVEHYMGLLDVLGQSGYLKEAEEFIENLPFEPTVTVMETLKSYARIHGDIDLEDHVEELIASLDPSKAVVNKFPTPPPKKYTAISMLDGRNRIIEYKNPTFYKDDEKLKALSSMKDAGYSPDIRCVLHDIDPEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 535
[Close]
BLAST of rna-XM_004505155.3 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5MKJ4|A0A6A5MKJ4_LUPAL (Putative tetratricopeptide-like helical domain, DYW domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00016090 PE=3 SV=1)

HSP 1 Score: 811.216 bits (2094), Expect = 0.000e+0
Identity = 436/628 (69.43%), Postives = 471/628 (75.00%), Query Frame = 0 
Query:    1 MLSSSFSLKLRTNYIHGNHLCKT----LSTSAIPNQYGRFPPHSQQPPSESDHTPFHPP-------------------PQYFNNHNHF-------PQN--THNAPARFPQQ-----GWNP-------QSPNFRPPPPQNPNFRPPPPQNPNFRPSP-------PQNPNFQQPNSSNRLNNQN--HWNPQTSPTVNPNQFQNPNNQFQNPNNQFQNPNNQFQNSNSQFQNPNQLNERASVQEQAQ--------PPSIVDLTRFCREGNVKEALELMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPTPPPKKYSAISMLEGRNRMIEYKNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            MLSSSF  K R ++I+GNH  +T    LSTSAIPN Y RFPP        SD  PFHP                    P    N +HF       P N  +HN   + P Q      + P       Q+ NF+PP  QNP F+PP  QN NFRP         PQN NF  PN+ NR NNQN  HW+    P+ NPNQ ++P                       QFQNPNQLN +AS+Q Q+Q        PPSI DLTR C+EG VKEA+ELMEKGVKAD+NCFDLL DLCGKSKSVEDAK+VHDYFLQST+RSD KL NKV+EMYGNCKSMTDARRVFDHMPNR+MDSWH+MIRGYANST GDEALQ+FE MNELGLEITSETLL VL+AC SAEAVEDAYLHFESMK+KYGIEPG+EHYMGLL VLGQSGYLKEAEEFIEKLPF PTVTV E LK+YARIHGDIDLEDHVEELIV LDPSKA ANKIPTPPPKKY+ ISMLEG+NR+IEYKNPTLYKDDEKLKAL GM EAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct:   14 MLSSSF--KSRIHFIYGNHCSQTMTMSLSTSAIPNDYQRFPP-------PSDSKPFHPQIHTKPNQWQQQQQQQQQRHPYSPQNQSHFQHENPPPPSNQFSHNYQNQNPDQLNYQNNYPPSRAPPISQNQNFQPPISQNPIFQPPTTQNHNFRPPTFQNHNFQPQNHNFPTPNAPNRWNNQNPNHWD---GPSQNPNQLRSP----------------------PQFQNPNQLNNQASIQVQSQVGAPSPPLPPSITDLTRLCQEGKVKEAIELMEKGVKADSNCFDLLIDLCGKSKSVEDAKEVHDYFLQSTYRSDDKLINKVLEMYGNCKSMTDARRVFDHMPNRSMDSWHLMIRGYANSTNGDEALQVFEQMNELGLEITSETLLEVLNACASAEAVEDAYLHFESMKSKYGIEPGMEHYMGLLNVLGQSGYLKEAEEFIEKLPFEPTVTVWEILKNYARIHGDIDLEDHVEELIVSLDPSKADANKIPTPPPKKYTEISMLEGKNRIIEYKNPTLYKDDEKLKALIGMMEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 607
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BLAST of rna-XM_004505155.3 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5MWV6|A0A6A5MWV6_LUPAL (Putative tetratricopeptide-like helical domain, DYW domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00007928 PE=3 SV=1)

HSP 1 Score: 801.201 bits (2068), Expect = 0.000e+0
Identity = 426/624 (68.27%), Postives = 463/624 (74.20%), Query Frame = 0 
Query:    1 MLSSSFSLKLRTNYIHGNHLCKTLSTSAIPNQYGRFPPHSQQPPSESDHTPFHP---------------------------------PPQYFNNHNHFPQNTHNAPARFPQQGWN--------------PQSPNFRPPPPQNPNFRPPPPQNPNFRPSPPQNPNFQQPNSSNRLNNQ--NHWNPQTSPTVNPNQFQNPNNQFQNPNNQFQNPNNQFQNSNSQFQNPNQLNERASVQEQAQ--------PPSIVDLTRFCREGNVKEALELMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPTPPPKKYSAISMLEGRNRMIEYKNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            MLSSS      +N+         LSTSA+PN+Y RFP H Q PPS+S  TPF+P                                 PP   N  +H  QN  N   R P Q  N               Q+ NF+PP  QN NF+ P  QN NF+P   QNPNFQ PN+ +R +NQ  N WN Q     NPNQ + P                       QFQNPN+LN  AS+Q QAQ        PPSI DLTR C++G VKEA+ELMEKGVKAD+NCFDLL DLCGKSKS+E AKKVHDYFLQSTFRSD KL+NKVIEMYGNCKSMTDARRVFDHMPNRNMDSWH+MIRGY NST GDEALQ+FE MNELGLEITSETL+AVLSAC SAE+VED YLHFESMK+KYGIEPGVEHYMGLL+VLGQSGYLKEAEEFIEKLPF PTVTV ETLK+YA IHGDIDLEDH+EELIV LDPSK VANKIPTPPPKKY+AISML+G+NR+IE+KNPTLYKDDEKLKALS MKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFK+GKCSCGDYW
Sbjct:   14 MLSSSLKSHTHSNHYTLTMTMMALSTSAVPNEYQRFPTH-QSPPSDS--TPFYPQNHTNPNQWQHQQQQPQRHPYPPQNQSHVQHGNPPPLPNQFSHSYQN-QNPNERNPNQWSNQIHNNYPHNRSPPISQNQNFQPPTSQNHNFQTPTSQNHNFQPPISQNPNFQTPNTPSRWSNQDTNQWNIQNQ---NPNQLRPP----------------------PQFQNPNRLNNEASIQGQAQVAAPSPPQPPSITDLTRLCQDGKVKEAIELMEKGVKADSNCFDLLIDLCGKSKSLEGAKKVHDYFLQSTFRSDDKLNNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHLMIRGYTNSTNGDEALQVFEQMNELGLEITSETLIAVLSACASAESVEDGYLHFESMKSKYGIEPGVEHYMGLLDVLGQSGYLKEAEEFIEKLPFEPTVTVWETLKNYAYIHGDIDLEDHIEELIVSLDPSKPVANKIPTPPPKKYTAISMLDGKNRIIEFKNPTLYKDDEKLKALSEMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKNGKCSCGDYW 608
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BLAST of rna-XM_004505155.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0KIR6|A0A8T0KIR6_PHAAN (Pentatricopeptide repeat-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0084990 PE=3 SV=1)

HSP 1 Score: 793.497 bits (2048), Expect = 0.000e+0
Identity = 414/594 (69.70%), Postives = 455/594 (76.60%), Query Frame = 0 
Query:    1 MLSSSFSLKLRTNYIHGNHLC-----KTLSTSAIPNQYGRFPPHS--QQPPSESDH----------TPFHPPPQYFNNHNHFPQNTHNAPARFPQQG-----WNPQSPNFRPPPPQNPNFRPPPPQNPNFRPSPPQNPNFQQPNSSNRLNNQNH-----WNPQTSPTVNPNQFQNPNNQFQNPNNQFQNPNNQFQNSNSQFQNPNQLNERASVQEQAQPPSIVDLTRFCREGNVKEALELMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMKNKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSYARIHGDIDLEDHVEELIVRLDPSKAVANKIPTPPPKKYSAISMLEGRNRMIEYKNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 567
            MLSSSF  KL+T+ IHGNH       K LSTSA+P+ Y RFP H   QQ PS+  H            F+P    F +HNH P+  HN P  FP+ G     WNPQSP       Q+PNF+ P  QNPN RPS           S NR +NQN      W+P T    NPNQFQNP+NQ  N                    N   +  +AS      PPSI DL   C+EGNVKEA+ELM+KGVKADA CF+LLFDLCG+SKS+EDAKK HD+FLQS+FRSD  L+NKVIEMYGNCKSMTDARRVFDHMP+RNMDSW +M+RGYAN+T GDEALQLFE MNELGLEITSETLLAVLSAC SAEAVEDAY+HFESMK+K+GIEPGVEHYMGLL+VLGQS YL EAEEFI KLPF PTVTV E LK YAR+HGD+DLED+ EEL+V LDPSKAV NKIPTPPPKKY+AISML+GRNR+IEYKNPTLYKDDEKLKALSGMK+AGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct:   14 MLSSSF--KLQTHLIHGNHYTQSLTTKFLSTSALPHHYQRFPSHQNQQQSPSDPTHLQPQQWQHQPQHFNPQTNQFLHHNHQPRQ-HNVPPSFPEHGQNHNQWNPQSPTH-----QSPNFQTPTSQNPNLRPS----------TSPNRWHNQNPATPNPWSPTTQGFPNPNQFQNPSNQLNN--------------------NQTSIQGQASPAPPPPPPSITDLALLCKEGNVKEAIELMDKGVKADAGCFNLLFDLCGQSKSLEDAKKAHDHFLQSSFRSDLMLNNKVIEMYGNCKSMTDARRVFDHMPSRNMDSWLLMMRGYANNTNGDEALQLFEQMNELGLEITSETLLAVLSACASAEAVEDAYVHFESMKSKFGIEPGVEHYMGLLDVLGQSAYLNEAEEFITKLPFEPTVTVWEKLKHYARVHGDVDLEDYAEELMVSLDPSKAVVNKIPTPPPKKYTAISMLDGRNRIIEYKNPTLYKDDEKLKALSGMKDAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 569
The following BLAST results are available for this feature:
BLAST of rna-XM_004505155.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|8.805e-17749.57Symbols: BLX, DYW2 | DYW domain protein 2 | chr2:6... [more]
|1.312e-9537.39Symbols: MEF8S | MEF8 similar | chr4:15661092-1566... [more]
|1.120e-8939.64Symbols: MEF8 | mitochondrial editing factor 8 | c... [more]
|1.120e-8939.64Symbols: MEF8 | mitochondrial editing factor 8 | c... [more]
|1.023e-7936.50Symbols: MEF29 | mitochondrial RNA editing factor ... [more]
|2.839e-7834.08Symbols: no symbol available | no full name availa... [more]
|3.291e-7834.81Symbols: no symbol available | no full name availa... [more]
|9.446e-7836.68Symbols: no symbol available | no full name availa... [more]
|9.918e-7834.91Symbols: SSTPR | | chr4:1221116-1223461 REVERSE L... [more]
|2.106e-7734.08Symbols: no symbol available | no full name availa... [more]
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BLAST of rna-XM_004505155.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q9ZQE5|PP153_ARATH8.400e-17649.57Pentatricopeptide repeat-containing protein At2g15... [more]
sp|Q9SUU7|PP346_ARATH1.259e-9437.39Pentatricopeptide repeat-containing protein At4g32... [more]
sp|Q680H3|PP170_ARATH1.078e-8839.64Pentatricopeptide repeat-containing protein At2g25... [more]
sp|Q9SUH6|PP341_ARATH9.909e-7936.50Pentatricopeptide repeat-containing protein At4g30... [more]
sp|Q9LW63|PP251_ARATH9.137e-7736.68Putative pentatricopeptide repeat-containing prote... [more]
sp|Q9SY02|PP301_ARATH9.613e-7734.91Pentatricopeptide repeat-containing protein At4g02... [more]
sp|A8MQA3|PP330_ARATH2.030e-7634.08Pentatricopeptide repeat-containing protein At4g21... [more]
sp|Q9LIQ7|PP252_ARATH1.160e-7535.10Pentatricopeptide repeat-containing protein At3g24... [more]
sp|Q9SMZ2|PP347_ARATH1.582e-7437.71Pentatricopeptide repeat-containing protein At4g33... [more]
sp|Q9SZT8|PP354_ARATH3.613e-7236.07Pentatricopeptide repeat-containing protein ELI1, ... [more]
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BLAST of rna-XM_004505155.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2YIT7|A0A1S2YIT7_CICAR0.000e+0100.00Pentatricopeptide repeat-containing protein At2g15... [more]
tr|A0A1S2YIY7|A0A1S2YIY7_CICAR0.000e+091.90Pentatricopeptide repeat-containing protein At2g15... [more]
tr|A0A9D4ZYA0|A0A9D4ZYA0_PEA0.000e+080.70DYW domain-containing protein OS=Pisum sativum OX=... [more]
tr|G7JL98|G7JL98_MEDTR0.000e+075.00PPR containing plant-like protein OS=Medicago trun... [more]
tr|I3SQG0|I3SQG0_MEDTR0.000e+075.00DYW domain-containing protein OS=Medicago truncatu... [more]
tr|A0A2K3N965|A0A2K3N965_TRIPR0.000e+080.04Pentatricopeptide repeat-containing protein OS=Tri... [more]
tr|A0A2K3PET2|A0A2K3PET2_TRIPR0.000e+077.58DYW domain-containing protein OS=Trifolium pratens... [more]
tr|A0A6A5MKJ4|A0A6A5MKJ4_LUPAL0.000e+069.43Putative tetratricopeptide-like helical domain, DY... [more]
tr|A0A6A5MWV6|A0A6A5MWV6_LUPAL0.000e+068.27Putative tetratricopeptide-like helical domain, DY... [more]
tr|A0A8T0KIR6|A0A8T0KIR6_PHAAN0.000e+069.70Pentatricopeptide repeat-containing protein OS=Pha... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:1.25.40.10:FF:000503coord: 196..344
e-value: 1.7E-66
score: 224.1
NoneNo IPR availablePIRSRPIRSR602481-1PIRSR602481-1coord: 232..274
e-value: 0.012
score: 8.3
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 475..567
e-value: 6.0E-41
score: 149.5
IPR002885Pentatricopeptide repeatNCBIFAMTIGR00756PPRcoord: 290..322
e-value: 1.1
score: 20.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 201..216
e-value: 2600.0
score: 10.2
coord: 290..319
e-value: 0.5
score: 21.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 287..321
score: 10.522905
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 196..353
e-value: 6.6E-30
score: 106.5
IPR045215Pentatricopeptide repeat-containing protein At1g15510-likePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 199..424

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_004505155.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004505155.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004505155.3; organism=Cicer arietinum; type=mRNA; length=1704bp
ATGCTATCTTCTTCTTTCTCTTTGAAGCTACGAACAAATTATATCCATGG
CAACCACTTGTGCAAAACCCTAAGTACCTCTGCTATTCCAAATCAGTACG
GTAGATTCCCTCCTCACTCTCAACAACCACCCTCTGAATCTGATCACACA
CCCTTTCATCCTCCTCCTCAATATTTCAACAATCATAATCACTTTCCTCA
AAATACCCATAATGCCCCTGCTCGATTTCCTCAACAGGGCTGGAACCCTC
AAAGCCCCAACTTCCGCCCACCACCTCCTCAAAACCCCAACTTCCGCCCA
CCACCTCCTCAAAACCCCAACTTCCGGCCATCACCTCCTCAAAATCCCAA
CTTTCAACAACCCAATAGTTCCAATCGATTGAACAATCAGAATCACTGGA
ACCCCCAGACCTCCCCAACTGTTAACCCAAACCAATTTCAAAACCCCAAC
AACCAATTTCAAAACCCCAACAACCAATTTCAAAACCCCAACAACCAATT
TCAAAACTCTAATAGCCAATTTCAAAACCCTAATCAGTTGAACGAACGAG
CTTCTGTTCAAGAACAAGCTCAGCCTCCTTCTATTGTTGATTTGACACGT
TTTTGTCGTGAGGGGAATGTTAAAGAGGCGCTTGAATTGATGGAAAAAGG
TGTTAAAGCTGATGCTAATTGCTTTGATCTTCTGTTTGATTTGTGTGGCA
AATCGAAATCAGTTGAGGATGCTAAGAAAGTGCATGATTACTTTTTACAA
TCTACTTTTAGGAGTGATTTCAAGTTGCATAATAAGGTGATTGAGATGTA
TGGGAATTGTAAAAGTATGACTGATGCGCGTAGAGTGTTTGATCATATGC
CTAACAGAAACATGGATTCTTGGCACATGATGATTCGTGGATATGCGAAT
AGTACAATGGGAGATGAGGCGTTGCAGTTATTTGAGCATATGAATGAGCT
GGGTTTGGAGATAACTTCGGAGACTTTGCTTGCAGTATTATCGGCTTGTG
GCAGTGCAGAGGCTGTGGAGGATGCTTACCTACATTTTGAATCCATGAAA
AACAAGTATGGAATTGAACCAGGGGTTGAGCACTACATGGGGCTTTTGGA
AGTTCTTGGACAATCTGGATACCTCAAAGAGGCTGAGGAGTTTATTGAGA
AGTTGCCATTTGGGCCAACAGTGACAGTATTGGAGACCCTCAAGAGTTAT
GCTCGAATTCATGGAGATATTGATCTTGAAGACCATGTTGAGGAGTTGAT
TGTTAGACTTGACCCATCAAAGGCTGTTGCAAATAAGATCCCTACGCCGC
CCCCGAAAAAGTATTCTGCGATTAGCATGCTCGAAGGCAGGAACAGAATG
ATCGAGTATAAGAATCCCACTCTTTACAAGGATGATGAGAAGTTGAAGGC
TTTGAGTGGAATGAAAGAAGCAGGATATGTTCCTGATACAAGATACGTTC
TTCATGACATTGATCAGGAAGCAAAGGAGCAGGCATTGCTCTACCACAGT
GAACGTCTAGCAATTGCCTATGGTCTTATTAGTACTCCACCTAGAACACC
TCTTAGGATTATCAAGAACCTACGTGTTTGTGGTGACTGTCACAATGCCA
TTAAGATCATGTCTAGGATTGTAGGTAGGGAATTGATTGTCAGAGATAAC
AAAAGGTTCCATCATTTCAAGGATGGGAAATGCTCTTGTGGGGATTATTG
GTGA
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protein sequence of rna-XM_004505155.3_CaCDCfrontier-NCBI_v1

>rna-XM_004505155.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004505155.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004505155.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=567bp
MLSSSFSLKLRTNYIHGNHLCKTLSTSAIPNQYGRFPPHSQQPPSESDHT
PFHPPPQYFNNHNHFPQNTHNAPARFPQQGWNPQSPNFRPPPPQNPNFRP
PPPQNPNFRPSPPQNPNFQQPNSSNRLNNQNHWNPQTSPTVNPNQFQNPN
NQFQNPNNQFQNPNNQFQNSNSQFQNPNQLNERASVQEQAQPPSIVDLTR
FCREGNVKEALELMEKGVKADANCFDLLFDLCGKSKSVEDAKKVHDYFLQ
STFRSDFKLHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYAN
STMGDEALQLFEHMNELGLEITSETLLAVLSACGSAEAVEDAYLHFESMK
NKYGIEPGVEHYMGLLEVLGQSGYLKEAEEFIEKLPFGPTVTVLETLKSY
ARIHGDIDLEDHVEELIVRLDPSKAVANKIPTPPPKKYSAISMLEGRNRM
IEYKNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHS
ERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDN
KRFHHFKDGKCSCGDYW
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mRNA from alignment at chr6:18273387..18275347+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_004505155.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004505155.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004505155.3; organism=Cicer arietinum; type=mRNA; length=1961bp; location=Sequence derived from: chr6:18273387..18275347+ (Cicer arietinum
cttgcatttctcTACGCCCTAGTTGAAGTTCCCACTGATTCAATTCAACA
ATGCtatcttcttctttctctttgaAGCTACGAACAAATTATATCCATGG
CAACCACTTGTGCAAAACCCTAAGTACCTCTGCTATTCCAAATCAGTACG
GTAGATTCCCTCCTCACTCTCAACAACCACCCTCTGAATCTGATCACACA
CCCTTTCATCCTCCTCCTCAATATTTCAACAATCATAATCACTTTCCTCA
AAATACCCATAATGCCCCTGCTCGATTTCCTCAACAGGGCTGGAACCCTC
AAAGCCCCAACTTCCGCCCACCACCTCCTCAAAACCCCAACTTCCGCCCA
CCACCTCCTCAAAACCCCAACTTCCGGCCATCACCTCCTCAAAATCCCAA
CTTTCAACAACCCAATAGTTCCAATCGATTGAACAATCAGAATCACTGGA
ACCCCCAGACCTCCCCAACTGTTAACCCAAACCAATTTCAAAACCCCAAC
AACCAATTTCAAAACCCCAACAACCAATTTCAAAACCCCAACAACCAATT
TCAAAACTCTAATAGCCaatttcaaaaccctaatcagTTGAACGAACGAG
CTTCTGTTCAAGAACAAGCTCAGCCTCCTTCTATTGTTGATTTGACACGT
TTTTGTCGTGAGGGGAATGTTAAAGAGGCGCTTGAATTGATGGAAAAAGG
TGTTAAAGCTGATGCTAATTGCTTTGATCTTCTGTTTGATTTGTGTGGCA
AATCGAAATCAGTTGAGGATGCTAAGAAAGTGCATGATTACTTTTTACAA
TCTACTTTTAGGAGTGATTTCAAGTTGCATAATAAGGTGATTGAGATGTA
TGGGAATTGTAAAAGTATGACTGATGCGCGTAGAGTGTTTGATCATATGC
CTAACAGAAACATGGATTCTTGGCACATGATGATTCGTGGATATGCGAAT
AGTACAATGGGAGATGAGGCGTTGCAGTTATTTGAGCATATGAATGAGCT
GGGTTTGGAGATAACTTCGGAGACTTTGCTTGCAGTATTATCGGCTTGTG
GCAGTGCAGAGGCTGTGGAGGATGCTTACCTACATTTTGAATCCATGAAA
AACAAGTATGGAATTGAACCAGGGGTTGAGCACTACATGGGGCTTTTGGA
AGTTCTTGGACAATCTGGATACCTCAAAGAGGCTGAGGAGTTTATTGAGA
AGTTGCCATTTGGGCCAACAGTGACAGTATTGGAGACCCTCAAGAGTTAT
GCTCGAATTCATGGAGATATTGATCTTGAAGACCATGTTGAGGAGTTGAT
TGTTAGACTTGACCCATCAAAGGCTGTTGCAAATAAGATCCCTACGCCGC
CCCCGAAAAAGTATTCTGCGATTAGCATGCTCGAAGGCAGGAACAGAATG
ATCGAGTATAAGAATCCCACTCTTTACAAGGATGATGAGAAGTTGAAGGC
TTTGAGTGGAATGAAAGAAGCAGGATATGTTCCTGATACAAGATACGTTC
TTCATGACATTGATCAGGAAGCAAAGGAGCAGGCATTGCTCTACCACAGT
GAACGTCTAGCAATTGCCTATGGTCTTATTAGTACTCCACCTAGAACACC
TCTTAGGATTATCAAGAACCTACGTGTTTGTGGTGACTGTCACAATGCCA
TTAAGATCATGTCTAGGATTGTAGGTAGGGAATTGATTGTCAGAGATAAC
AAAAGGTTCCATCATTTCAAGGATGGGAAATGCTCTTGTGGGGATTATTG
GTGATTGAATCATTACTCCAAATCCTACAATAGCAAGAATACTGCTAGGG
ACAGAAGATGAATTATGTAGTATGCACTGATTTAAAATGTATTTGCTTCA
TGCTCAGATATCAGCACTATTCTCTCCCTTTTTCTACTTATTGCTGCTAT
ATCTGCTCTTGTATGGTTTtatgtaattaaatattttttggtttTAGCAA
CTTCAAATTTA
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Coding sequence (CDS) from alignment at chr6:18273387..18275347+

>rna-XM_004505155.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004505155.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004505155.3; organism=Cicer arietinum; type=CDS; length=1704bp; location=Sequence derived from: chr6:18273387..18275347+ (Cicer arietinum
ATGCtatcttcttctttctctttgaAGCTACGAACAAATTATATCCATGG
CAACCACTTGTGCAAAACCCTAAGTACCTCTGCTATTCCAAATCAGTACG
GTAGATTCCCTCCTCACTCTCAACAACCACCCTCTGAATCTGATCACACA
CCCTTTCATCCTCCTCCTCAATATTTCAACAATCATAATCACTTTCCTCA
AAATACCCATAATGCCCCTGCTCGATTTCCTCAACAGGGCTGGAACCCTC
AAAGCCCCAACTTCCGCCCACCACCTCCTCAAAACCCCAACTTCCGCCCA
CCACCTCCTCAAAACCCCAACTTCCGGCCATCACCTCCTCAAAATCCCAA
CTTTCAACAACCCAATAGTTCCAATCGATTGAACAATCAGAATCACTGGA
ACCCCCAGACCTCCCCAACTGTTAACCCAAACCAATTTCAAAACCCCAAC
AACCAATTTCAAAACCCCAACAACCAATTTCAAAACCCCAACAACCAATT
TCAAAACTCTAATAGCCaatttcaaaaccctaatcagTTGAACGAACGAG
CTTCTGTTCAAGAACAAGCTCAGCCTCCTTCTATTGTTGATTTGACACGT
TTTTGTCGTGAGGGGAATGTTAAAGAGGCGCTTGAATTGATGGAAAAAGG
TGTTAAAGCTGATGCTAATTGCTTTGATCTTCTGTTTGATTTGTGTGGCA
AATCGAAATCAGTTGAGGATGCTAAGAAAGTGCATGATTACTTTTTACAA
TCTACTTTTAGGAGTGATTTCAAGTTGCATAATAAGGTGATTGAGATGTA
TGGGAATTGTAAAAGTATGACTGATGCGCGTAGAGTGTTTGATCATATGC
CTAACAGAAACATGGATTCTTGGCACATGATGATTCGTGGATATGCGAAT
AGTACAATGGGAGATGAGGCGTTGCAGTTATTTGAGCATATGAATGAGCT
GGGTTTGGAGATAACTTCGGAGACTTTGCTTGCAGTATTATCGGCTTGTG
GCAGTGCAGAGGCTGTGGAGGATGCTTACCTACATTTTGAATCCATGAAA
AACAAGTATGGAATTGAACCAGGGGTTGAGCACTACATGGGGCTTTTGGA
AGTTCTTGGACAATCTGGATACCTCAAAGAGGCTGAGGAGTTTATTGAGA
AGTTGCCATTTGGGCCAACAGTGACAGTATTGGAGACCCTCAAGAGTTAT
GCTCGAATTCATGGAGATATTGATCTTGAAGACCATGTTGAGGAGTTGAT
TGTTAGACTTGACCCATCAAAGGCTGTTGCAAATAAGATCCCTACGCCGC
CCCCGAAAAAGTATTCTGCGATTAGCATGCTCGAAGGCAGGAACAGAATG
ATCGAGTATAAGAATCCCACTCTTTACAAGGATGATGAGAAGTTGAAGGC
TTTGAGTGGAATGAAAGAAGCAGGATATGTTCCTGATACAAGATACGTTC
TTCATGACATTGATCAGGAAGCAAAGGAGCAGGCATTGCTCTACCACAGT
GAACGTCTAGCAATTGCCTATGGTCTTATTAGTACTCCACCTAGAACACC
TCTTAGGATTATCAAGAACCTACGTGTTTGTGGTGACTGTCACAATGCCA
TTAAGATCATGTCTAGGATTGTAGGTAGGGAATTGATTGTCAGAGATAAC
AAAAGGTTCCATCATTTCAAGGATGGGAAATGCTCTTGTGGGGATTATTG
GTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR032867DYW_dom
IPR002885Pentatricopeptide_rpt
IPR011990TPR-like_helical_dom_sf
IPR045215PPR_prot_At1g15510
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0009451RNA modification