rna-XM_004507092.3

Transcript Overview
Namerna-XM_004507092.3
Unique Namerna-XM_004507092.3_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length459
Productcopper transporter 6-like
References
External references for this mRNA
DatabaseAccession
GeneID101509977
GenBankXM_004507092.3
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr6chromosomechr6:54114771..54115738 +Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cacanL017Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0106Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0263Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascanL461Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cacanL252Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascanL600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cacanL254Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0790Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cancanL017Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanL0974Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0989Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL1047Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caicanL0736Cicer arietinum ICC 4958 genome v2Cicer arietinum
caicanL0781Cicer arietinum ICC 4958 genome v2Cicer arietinum
canccR0785Cajanus cajan Asha genome v1.0Cajanus cajan
canccR0843Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR589Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR679Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR704Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canvrvR483Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR413Vicia faba cv. Tiffany genome v1.0Vicia faba
canvrvR504Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canvfhR430Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canpvR531Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canpvR551Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvfhR461Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cantifR475Vicia faba cv. Tiffany genome v1.0Vicia faba
canvfhR493Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvssR473Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR504Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR542Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvuaR419Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR426Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR408Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuR453Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuaR465Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuaR469Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canzwsR441Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuR500Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canpsR554Pisum sativum Cameor genome v1aPisum sativum
canpsR580Pisum sativum Cameor genome v1aPisum sativum
avjcanL076Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL588Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR373Cicer arietinum
cancarR429Cicer arietinum
cancarR438Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_17218Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Psat07G0570200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
evm.model.Chr05.981Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
evm.model.Chr11.1498Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.6g029840.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun11g159800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.6g037760.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat7g213120.1Pisum sativum Cameor genome v1aPisum sativum
Va08G065460.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Phvul.011G060400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_041711Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_022778424.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Cr_14518.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
jg9006.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat7g211560.1Pisum sativum Cameor genome v1aPisum sativum
rna-TanjilR_23523Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Ca_18569.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_16266Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101509977gene-LOC101509977_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_004507092.3-1exon-XM_004507092.3-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_004507149.1cds-XP_004507149.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_004507092.3_CaCDCfrontier-NCBI_v1rna-XM_004507092.3_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_004507092.3_CaCDCfrontier-NCBI_v1rna-XM_004507092.3_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


Homology
[Close]
BLAST of rna-XM_004507092.3 vs. Araport11
Match: | (Symbols: COPT6 | copper transporter 6 | chr2:11512992-11513429 FORWARD LENGTH=145)

HSP 1 Score: 134.035 bits (336), Expect = 1.126e-40
Identity = 75/146 (51.37%), Postives = 100/146 (68.49%), Query Frame = 0 
Query:   10 MDGMSMAPKSSS------NGTMMMGHKMHMTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTRFIK-PGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFV-STSAFKKPHHDD-PYD 146
            MD  +M P S S      N  M+M   MHMTFFWGK+  ILF GWPG   GMYVL LI+VF ++V++E L+ +  ++  GS   A GLVQT ++ L+ GLAYLVMLA+MSFNGGVF+VA+ G A+GF +  ++AFK P  D+ P++
Sbjct:    1 MDHGNMPPSSPSSMVNHTNSNMIM---MHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVGFMLFGSTAFKNPSDDEKPFE 143
[Close]
BLAST of rna-XM_004507092.3 vs. Araport11
Match: | (Symbols: COPT1 | copper transporter 1 | chr5:23833945-23834457 REVERSE LENGTH=170)

HSP 1 Score: 122.479 bits (306), Expect = 6.133e-36
Identity = 63/124 (50.81%), Postives = 83/124 (66.94%), Query Frame = 0 
Query:   34 TFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTRFIKPG---SNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFV-STSAFKKPHHDDPYD-LPPLSC 152
            TFFWGK+  +LF GWPG  +GMY L LI VFF++VL E L+ +  ++     S   A GL+QT ++ LRIGLAYLVMLA+MSFN GVFLVA+ GHA+GF +  +  F+    D   + +PP  C
Sbjct:   45 TFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQTFRNTSDDRKTNYVPPSGC 168
[Close]
BLAST of rna-XM_004507092.3 vs. Araport11
Match: | (Symbols: COPT2 | copper transporter 2 | chr3:17268887-17269363 FORWARD LENGTH=158)

HSP 1 Score: 119.398 bits (298), Expect = 8.118e-35
Identity = 73/153 (47.71%), Postives = 98/153 (64.05%), Query Frame = 0 
Query:    3 DGGHMHGMDGMSMAPKSSSNGTMMMGHKMHMTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTRFIK-PGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFV-STSAFKKPHHDDPYD--LPPLS 151
            D  HMH M   S +  S SN T      MHMTFFWGK+  +LF GWPG  +GMY L LI++F ++V+ E L+ +  ++  GS   A GL QT ++ L+ GL+YLVMLA+MSFN GVF+VA+ G+ +GFF+  ++ FKKP  D      LPP S
Sbjct:    2 DHDHMHDMPPPSPSSSSMSNHTTPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGVGFFLFGSTTFKKPSDDQKTAELLPPSS 154
[Close]
BLAST of rna-XM_004507092.3 vs. Araport11
Match: | (Symbols: COPT3 | copper transporter 3 | chr5:23836724-23837179 FORWARD LENGTH=151)

HSP 1 Score: 112.079 bits (279), Expect = 4.274e-32
Identity = 56/123 (45.53%), Postives = 77/123 (62.60%), Query Frame = 0 
Query:   28 GHKMHMTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTRFIKPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFV-STSAFKKPHHDDPYDLPP 149
            G  MHMTFFWGK   +LFDGWPG    MY + L ++F +S   E LSR  F+K G   +  GL+QT ++ +R  L+YLVMLA+MSFNGGVF+ A+ G  LGF +  + AF+    +   ++  
Sbjct:   27 GGMMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFMKSGPASLGGGLLQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSRAFRATSSNSHTEVQS 149
[Close]
BLAST of rna-XM_004507092.3 vs. Araport11
Match: | (Symbols: COPT4 | copper transporter 4 | chr2:15870258-15870695 REVERSE LENGTH=145)

HSP 1 Score: 105.145 bits (261), Expect = 2.091e-29
Identity = 52/104 (50.00%), Postives = 72/104 (69.23%), Query Frame = 0 
Query:   31 MHMTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTR---FIKPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFV 131
            +H TF+WG +  +LF GWPG   GMY LALI VFF++ L E L+R      IK G++ +A    +T ++ ++ G +YLV+LA++SFNGGVFL A+ GHALGF V
Sbjct:   30 LHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADKLAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAV 133
[Close]
BLAST of rna-XM_004507092.3 vs. Araport11
Match: | (Symbols: AtCOPT5, COPT5 | copper transporter 5 | chr5:6985481-6985921 REVERSE LENGTH=146)

HSP 1 Score: 65.4698 bits (158), Expect = 5.431e-14
Identity = 46/141 (32.62%), Postives = 55/141 (39.01%), Query Frame = 0 
Query:   31 MHMTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTR-------------------------FIKPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGF--FVSTSAFKKPHHDDP 144
            MHMTF+WG  A ILFD W       Y+L LI  F  S   + L   R                          I       A      LL  +   + YL+MLA MSFNGGVF+  V+G   G+  F S         DDP
Sbjct:    2 MHMTFYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRAPPPPRSSSGVSAPLIPKSGTRSAAKAASVLLFGVNAAIGYLLMLAAMSFNGGVFIAIVVGLTAGYAVFRSDDGGADTATDDP 142
[Close]
BLAST of rna-XM_004507092.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8GWP3|COPT6_ARATH (Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.078e-39
Identity = 75/146 (51.37%), Postives = 100/146 (68.49%), Query Frame = 0 
Query:   10 MDGMSMAPKSSS------NGTMMMGHKMHMTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTRFIK-PGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFV-STSAFKKPHHDD-PYD 146
            MD  +M P S S      N  M+M   MHMTFFWGK+  ILF GWPG   GMYVL LI+VF ++V++E L+ +  ++  GS   A GLVQT ++ L+ GLAYLVMLA+MSFNGGVF+VA+ G A+GF +  ++AFK P  D+ P++
Sbjct:    1 MDHGNMPPSSPSSMVNHTNSNMIM---MHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVGFMLFGSTAFKNPSDDEKPFE 143
[Close]
BLAST of rna-XM_004507092.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q39065|COPT1_ARATH (Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 5.880e-35
Identity = 63/124 (50.81%), Postives = 83/124 (66.94%), Query Frame = 0 
Query:   34 TFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTRFIKPG---SNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFV-STSAFKKPHHDDPYD-LPPLSC 152
            TFFWGK+  +LF GWPG  +GMY L LI VFF++VL E L+ +  ++     S   A GL+QT ++ LRIGLAYLVMLA+MSFN GVFLVA+ GHA+GF +  +  F+    D   + +PP  C
Sbjct:   45 TFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQTFRNTSDDRKTNYVPPSGC 168
[Close]
BLAST of rna-XM_004507092.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9STG2|COPT2_ARATH (Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 7.781e-34
Identity = 73/153 (47.71%), Postives = 98/153 (64.05%), Query Frame = 0 
Query:    3 DGGHMHGMDGMSMAPKSSSNGTMMMGHKMHMTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTRFIK-PGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFV-STSAFKKPHHDDPYD--LPPLS 151
            D  HMH M   S +  S SN T      MHMTFFWGK+  +LF GWPG  +GMY L LI++F ++V+ E L+ +  ++  GS   A GL QT ++ L+ GL+YLVMLA+MSFN GVF+VA+ G+ +GFF+  ++ FKKP  D      LPP S
Sbjct:    2 DHDHMHDMPPPSPSSSSMSNHTTPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGVGFFLFGSTTFKKPSDDQKTAELLPPSS 154
[Close]
BLAST of rna-XM_004507092.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FGU8|COPT3_ARATH (Copper transporter 3 OS=Arabidopsis thaliana OX=3702 GN=COPT3 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.098e-31
Identity = 56/123 (45.53%), Postives = 77/123 (62.60%), Query Frame = 0 
Query:   28 GHKMHMTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTRFIKPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFV-STSAFKKPHHDDPYDLPP 149
            G  MHMTFFWGK   +LFDGWPG    MY + L ++F +S   E LSR  F+K G   +  GL+QT ++ +R  L+YLVMLA+MSFNGGVF+ A+ G  LGF +  + AF+    +   ++  
Sbjct:   27 GGMMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFMKSGPASLGGGLLQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSRAFRATSSNSHTEVQS 149
[Close]
BLAST of rna-XM_004507092.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q94EE4|COPT1_ORYSJ (Copper transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.086e-28
Identity = 59/125 (47.20%), Postives = 77/125 (61.60%), Query Frame = 0 
Query:   32 HMTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTR-----FIKPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFV-------STSAFKKPHHDDP 144
            HMTFFWGK++ +LF  WPG + GMY LALI VF ++V++E L   R            P A GL +  +H +R+G+AYL+MLALMSFNGGVFLVAV GHA GF           +  ++   +DP
Sbjct:   34 HMTFFWGKNSEVLFTMWPGTRGGMYALALIFVFALAVIVEFLGSRRADACLAALARRAPAAGGLARAAVHTVRVGVAYLLMLALMSFNGGVFLVAVAGHAAGFLAFRAGLCGGPAQVEEDRKNDP 158
[Close]
BLAST of rna-XM_004507092.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8SAA5|COPT4_ARATH (Copper transporter 4 OS=Arabidopsis thaliana OX=3702 GN=COPT4 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 2.006e-28
Identity = 52/104 (50.00%), Postives = 72/104 (69.23%), Query Frame = 0 
Query:   31 MHMTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTR---FIKPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFV 131
            +H TF+WG +  +LF GWPG   GMY LALI VFF++ L E L+R      IK G++ +A    +T ++ ++ G +YLV+LA++SFNGGVFL A+ GHALGF V
Sbjct:   30 LHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADKLAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAV 133
[Close]
BLAST of rna-XM_004507092.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q60EN8|COPT2_ORYSJ (Copper transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT2 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.935e-24
Identity = 53/130 (40.77%), Postives = 73/130 (56.15%), Query Frame = 0 
Query:   31 MHMTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTRFIKPGSNPVAVGLVQTL----LHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFVSTSAF----KKPHHDDPYDLPPLSC 152
            MHMTFFWGK+  +LF  WPG + GMY LA++ +F ++VL+E     R ++                  +HA+R+G+AYL+MLALMSFNGGVFL  V GHA GF    +        P  ++     P+ C
Sbjct:   23 MHMTFFWGKNTEVLFTLWPGARGGMYALAILFMFALAVLLEFRG-YRVLEARLARRRAPRAAAALRTAVHAVRVGVAYLIMLALMSFNGGVFLAIVAGHAAGFLAFRAGLCGGGPAPPLEEDRKNDPVCC 151
[Close]
BLAST of rna-XM_004507092.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q7XTF8|COPT6_ORYSJ (Copper transporter 6 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT6 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.507e-19
Identity = 64/157 (40.76%), Postives = 82/157 (52.23%), Query Frame = 0 
Query:    9 GMDGMSMAPKSSSNGTMM--------MGHKMHMTFFWGKDALILFDGWPGGK-TGMYVLALILVFF-------MSVLIELLSRTRFI-------KPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFVSTSAFKKPHHD 142
            GM  M+MAP  S + T          M   MHMTFFW   A++L  GWPG +  GMY L L+ V         +SVL   L+R           +P   P +   + T +HA R+G+AYLVMLA+MSFN GV L AV GHALGF ++ S  +    D
Sbjct:    8 GMGPMAMAPPRSGHATAAAPPPPQHKMAMMMHMTFFWSDRAVVLIRGWPGERGAGMYALCLLFVLALAALTEGLSVLSRRLARRGGGAASSDGGRPAPAPASSAALLTAVHAARMGMAYLVMLAVMSFNVGVLLAAVAGHALGFLLARSRVRPAARD 164
[Close]
BLAST of rna-XM_004507092.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q93VM8|COPT5_ARATH (Copper transporter 5 OS=Arabidopsis thaliana OX=3702 GN=COPT5 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 5.245e-13
Identity = 46/141 (32.62%), Postives = 55/141 (39.01%), Query Frame = 0 
Query:   31 MHMTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTR-------------------------FIKPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGF--FVSTSAFKKPHHDDP 144
            MHMTF+WG  A ILFD W       Y+L LI  F  S   + L   R                          I       A      LL  +   + YL+MLA MSFNGGVF+  V+G   G+  F S         DDP
Sbjct:    2 MHMTFYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRAPPPPRSSSGVSAPLIPKSGTRSAAKAASVLLFGVNAAIGYLLMLAAMSFNGGVFIAIVVGLTAGYAVFRSDDGGADTATDDP 142
[Close]
BLAST of rna-XM_004507092.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q10KT6|COPT4_ORYSJ (Copper transporter 4 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT4 PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.276e-12
Identity = 49/127 (38.58%), Postives = 62/127 (48.82%), Query Frame = 0 
Query:   24 TMMMGHKMHMT----FFWGKDALILFDGWPGGKTG--MY----------VLALILVFFMSVLIELLSRTRFIKPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFVSTS 134
            TMM G  M MT    F WG  A++LF  WPG + G  MY                +   S  ++L       +         L+   +HA R+GLAYLVMLA+MSFN GV L AV GHA GF ++ S
Sbjct:   21 TMMPGMAMPMTTGMSFTWGHRAVVLFPRWPGDRAGVGMYFLCLLLVLALAALAEALSAASRRLDLDLDLSRSRGRRRRRRQQLLAAGVHAARMGLAYLVMLAVMSFNAGVLLAAVAGHAAGFLLARS 147
[Close]
BLAST of rna-XM_004507092.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YMQ0|A0A1S2YMQ0_CICAR (Copper transport protein OS=Cicer arietinum OX=3827 GN=LOC101509977 PE=3 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 2.388e-104
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 
Query:    1 MDDGGHMHGMDGMSMAPKSSSNGTMMMGHKMHMTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTRFIKPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFVSTSAFKKPHHDDPYDLPPLSC 152
            MDDGGHMHGMDGMSMAPKSSSNGTMMMGHKMHMTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTRFIKPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFVSTSAFKKPHHDDPYDLPPLSC
Sbjct:    1 MDDGGHMHGMDGMSMAPKSSSNGTMMMGHKMHMTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTRFIKPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFVSTSAFKKPHHDDPYDLPPLSC 152
[Close]
BLAST of rna-XM_004507092.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YML1|A0A1S2YML1_CICAR (Copper transport protein OS=Cicer arietinum OX=3827 GN=LOC101493985 PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 3.656e-76
Identity = 121/152 (79.61%), Postives = 131/152 (86.18%), Query Frame = 0 
Query:    7 MHGMD-GMSMAPKSSSNGTMMMGHK----MHMTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTRFIKPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFVSTSAFKKPHH-DDPYDLPPLSC 152
            M GMD GM+MAPKSS N +MMM HK    MHMTF+WGKDALILFD +P GKT MYVLAL +VF MSVLIELLS TRFIKPGSN VA  L+QT+LHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFVSTSAFKK H  D+PYDLPP++C
Sbjct:    3 MQGMDHGMAMAPKSSHNCSMMMNHKRHGMMHMTFYWGKDALILFDDFPAGKTNMYVLALFVVFLMSVLIELLSHTRFIKPGSNRVAACLIQTVLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFVSTSAFKKSHQLDEPYDLPPMAC 154
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BLAST of rna-XM_004507092.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NXL7|A0A2Z6NXL7_TRISU (Copper transport protein OS=Trifolium subterraneum OX=3900 GN=TSUD_88310 PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 1.361e-72
Identity = 117/151 (77.48%), Postives = 127/151 (84.11%), Query Frame = 0 
Query:    9 GMDGMSMAPKSSS-NGT-MMMGHKM----HMTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTRFIKPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFVSTSAFKKPHHDDP-YDLPPLSC 152
            GMDGMSMAPKSSS NGT MMMGHKM    HMTFFWG DALILFDGWP G TG Y+LAL +VF MS+LIELLS TRF+KP SNP   GLVQTLLH LR+GLAYLVMLALMSFNGGVFLVAVLGHA+GFF  + AF+KP HDD  YDLPP++C
Sbjct:    7 GMDGMSMAPKSSSTNGTTMMMGHKMRGMMHMTFFWGTDALILFDGWPAGNTGHYLLALFMVFAMSILIELLSHTRFVKPNSNPTVAGLVQTLLHVLRVGLAYLVMLALMSFNGGVFLVAVLGHAIGFFFCSRAFRKPLHDDKTYDLPPMAC 157
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BLAST of rna-XM_004507092.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D5A0A2|A0A9D5A0A2_PEA (Copper transport protein OS=Pisum sativum OX=3888 GN=KIW84_075752 PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 4.541e-72
Identity = 114/151 (75.50%), Postives = 126/151 (83.44%), Query Frame = 0 
Query:    9 GMDGMSMAPKSS---SNGTMMMGHKM----HMTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTRFIKPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFVSTSAFKKPHHDDPYDLPPLSC 152
            G DGM+MAP SS   +NGTM  GHKM    HMTF+WGKDALILFD WP G +GMY LALI+VFFMSV IELLS TR IKPGSNPV  GLVQTLLH +R+GLAYLVMLALMSFNGGVFLVAVLGHA+GFF+  SAF+K H D+PYDLPP+SC
Sbjct:    6 GHDGMAMAPSSSSSSTNGTMTTGHKMQGMMHMTFYWGKDALILFDQWPAGNSGMYALALIIVFFMSVFIELLSHTRIIKPGSNPVVAGLVQTLLHVVRVGLAYLVMLALMSFNGGVFLVAVLGHAIGFFLCGSAFRKQHLDEPYDLPPMSC 156
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BLAST of rna-XM_004507092.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3K414|A0A2K3K414_TRIPR (Copper transport protein OS=Trifolium pratense OX=57577 GN=L195_g052232 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.064e-68
Identity = 101/120 (84.17%), Postives = 112/120 (93.33%), Query Frame = 0 
Query:   33 MTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTRFIKPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFVSTSAFKKPHHDDPYDLPPLSC 152
            MTFFWGKDALILF+ WP G TGMYVLALI+VF MS+LIELLSRTRFIKPGSN VA GLVQTLLH +R+GLAYLVMLALMSFNGGVFLVAVLGHALGFF+ ++AF+KPHHD+PYDLPP+SC
Sbjct:    1 MTFFWGKDALILFNNWPNGDTGMYVLALIIVFIMSLLIELLSRTRFIKPGSNTVASGLVQTLLHVVRVGLAYLVMLALMSFNGGVFLVAVLGHALGFFLCSTAFRKPHHDEPYDLPPISC 120
[Close]
BLAST of rna-XM_004507092.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3MJ93|A0A2K3MJ93_TRIPR (Copper transport protein OS=Trifolium pratense OX=57577 GN=L195_g046998 PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 1.213e-68
Identity = 118/163 (72.39%), Postives = 130/163 (79.75%), Query Frame = 0 
Query:    3 DGGHMH--GMDGMSMAPKSSSNGTMM-----MGHKMH----MTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTR-FIKPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFVSTSAFKK-PHHDDPYDLPPLSC 152
            D GHMH  GMDGM+M P S    +       MGH+MH    MTFFWGKD LILFD WP G  G YVLALI+VF MSVLIELLSRTR FIKPGSN VA GLVQT+LH +R+GLAYLVMLALMSFNGGVFLVAVLGHA+GFF+ +SAFKK PHHD+PYDLPP+SC
Sbjct:    2 DDGHMHHGGMDGMTMTPPSPPPSSSSSSNGGMGHEMHAMMHMTFFWGKDVLILFDNWPNGDIGKYVLALIIVFVMSVLIELLSRTRRFIKPGSNTVASGLVQTVLHVVRVGLAYLVMLALMSFNGGVFLVAVLGHAIGFFLCSSAFKKQPHHDEPYDLPPISC 164
[Close]
BLAST of rna-XM_004507092.3 vs. UniProtKB/TrEMBL
Match: tr|G7JDP2|G7JDP2_MEDTR (Copper transport protein OS=Medicago truncatula OX=3880 GN=11427657 PE=3 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 1.223e-67
Identity = 112/151 (74.17%), Postives = 122/151 (80.79%), Query Frame = 0 
Query:    8 HGMD-GMSMAPKSSSNGT-----MMMGHKMHMTFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTRFIKPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFVSTSAFKKPHHDDPYDLPPLSC 152
            H MD GM+MAPKSSS+         M   MHMTFFWGKDALILFD WP G +G YVLALILVF MS+LIE LS TRFIKPGSNP+  GLVQTLLH LR+GLAYLVMLALMSFNGGVFLVAVLGHA+GFF  + AFKKPH D+ +DLPPLSC
Sbjct:    3 HDMDHGMAMAPKSSSSTNDTMMMGQMHDMMHMTFFWGKDALILFDNWPAGNSGKYVLALILVFAMSILIEFLSSTRFIKPGSNPIVAGLVQTLLHVLRVGLAYLVMLALMSFNGGVFLVAVLGHAVGFFFRSRAFKKPHQDENFDLPPLSC 153
[Close]
BLAST of rna-XM_004507092.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3K6L3|A0A2K3K6L3_TRIPR (Copper transport protein OS=Trifolium pratense OX=57577 GN=L195_g052708 PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.118e-66
Identity = 109/151 (72.19%), Postives = 116/151 (76.82%), Query Frame = 0 
Query:    9 GMDGMSMAPKSSS-NGTMMMGHKMHM------TFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTRFIKPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFVSTSAFKKPHHDDPYDLPPLSC 152
            GMDGMSM PKSSS N T MM            TFFWGKDALILF+GWP G T  Y+LAL +VF MSV IELLS TRFIKP SNP   GLVQTLLH LR+GLAYLVMLALMSFNGGVFLVA LGHALGFF  + AFKKP HD PYDLPP++C
Sbjct:    7 GMDGMSMPPKSSSTNDTTMMTGHKMHGMMMHMTFFWGKDALILFNGWPAGNTANYLLALFMVFAMSVFIELLSHTRFIKPDSNPTVAGLVQTLLHVLRVGLAYLVMLALMSFNGGVFLVAXLGHALGFFFCSRAFKKPLHDKPYDLPPMTC 157
[Close]
BLAST of rna-XM_004507092.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4ZYE9|A0A9D4ZYE9_PEA (Copper transport protein OS=Pisum sativum OX=3888 GN=KIW84_075702 PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.443e-66
Identity = 99/119 (83.19%), Postives = 109/119 (91.60%), Query Frame = 0 
Query:   34 TFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTRFIKPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFVSTSAFKKPHHDDPYDLPPLSC 152
            TF+WGKDALILF+ WP G TGMYVLALI+VF MSVLIELLSRTR IKPGSNPV  GLVQTLLH LR+GLAYLVMLALMSFNGGVFLVAVLGHALGF +S+SAF+K +HD+PYDLPP+SC
Sbjct:   44 TFYWGKDALILFNDWPAGDTGMYVLALIIVFVMSVLIELLSRTRLIKPGSNPVTAGLVQTLLHVLRVGLAYLVMLALMSFNGGVFLVAVLGHALGFLLSSSAFRKQNHDEPYDLPPISC 162
[Close]
BLAST of rna-XM_004507092.3 vs. UniProtKB/TrEMBL
Match: tr|I3SIQ7|I3SIQ7_MEDTR (Copper transport protein OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 3.432e-64
Identity = 101/120 (84.17%), Postives = 108/120 (90.00%), Query Frame = 0 
Query:   34 TFFWGKDALILFDGWPGGKTGMYVLALILVFFMSVLIELLSRTRFIKPGSNPVAVGLVQTLLHALRIGLAYLVMLALMSFNGGVFLVAVLGHALGFFVSTSAFKKP-HHDDPYDLPPLSC 152
            TFFWGKDALILF+ WP G TGMYVLALILVF M+VLIELLSRTRFIKPGSN VA GL QTLLH LR+GLAYLVMLALMSFNGGVFLVAVLGHALGFF+ +SAF+KP  HD+ YDLPPLSC
Sbjct:   45 TFFWGKDALILFNNWPNGDTGMYVLALILVFVMAVLIELLSRTRFIKPGSNHVAAGLFQTLLHVLRVGLAYLVMLALMSFNGGVFLVAVLGHALGFFLCSSAFRKPKQHDEAYDLPPLSC 164
The following BLAST results are available for this feature:
BLAST of rna-XM_004507092.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 6
Match NameE-valueIdentityDescription
|1.126e-4051.37Symbols: COPT6 | copper transporter 6 | chr2:11512... [more]
|6.133e-3650.81Symbols: COPT1 | copper transporter 1 | chr5:23833... [more]
|8.118e-3547.71Symbols: COPT2 | copper transporter 2 | chr3:17268... [more]
|4.274e-3245.53Symbols: COPT3 | copper transporter 3 | chr5:23836... [more]
|2.091e-2950.00Symbols: COPT4 | copper transporter 4 | chr2:15870... [more]
|5.431e-1432.62Symbols: AtCOPT5, COPT5 | copper transporter 5 | c... [more]
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BLAST of rna-XM_004507092.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q8GWP3|COPT6_ARATH1.078e-3951.37Copper transporter 6 OS=Arabidopsis thaliana OX=37... [more]
sp|Q39065|COPT1_ARATH5.880e-3550.81Copper transporter 1 OS=Arabidopsis thaliana OX=37... [more]
sp|Q9STG2|COPT2_ARATH7.781e-3447.71Copper transporter 2 OS=Arabidopsis thaliana OX=37... [more]
sp|Q9FGU8|COPT3_ARATH4.098e-3145.53Copper transporter 3 OS=Arabidopsis thaliana OX=37... [more]
sp|Q94EE4|COPT1_ORYSJ1.086e-2847.20Copper transporter 1 OS=Oryza sativa subsp. japoni... [more]
sp|Q8SAA5|COPT4_ARATH2.006e-2850.00Copper transporter 4 OS=Arabidopsis thaliana OX=37... [more]
sp|Q60EN8|COPT2_ORYSJ4.935e-2440.77Copper transporter 2 OS=Oryza sativa subsp. japoni... [more]
sp|Q7XTF8|COPT6_ORYSJ9.507e-1940.76Copper transporter 6 OS=Oryza sativa subsp. japoni... [more]
sp|Q93VM8|COPT5_ARATH5.245e-1332.62Copper transporter 5 OS=Arabidopsis thaliana OX=37... [more]
sp|Q10KT6|COPT4_ORYSJ1.276e-1238.58Copper transporter 4 OS=Oryza sativa subsp. japoni... [more]
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BLAST of rna-XM_004507092.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2YMQ0|A0A1S2YMQ0_CICAR2.388e-104100.00Copper transport protein OS=Cicer arietinum OX=382... [more]
tr|A0A1S2YML1|A0A1S2YML1_CICAR3.656e-7679.61Copper transport protein OS=Cicer arietinum OX=382... [more]
tr|A0A2Z6NXL7|A0A2Z6NXL7_TRISU1.361e-7277.48Copper transport protein OS=Trifolium subterraneum... [more]
tr|A0A9D5A0A2|A0A9D5A0A2_PEA4.541e-7275.50Copper transport protein OS=Pisum sativum OX=3888 ... [more]
tr|A0A2K3K414|A0A2K3K414_TRIPR1.064e-6884.17Copper transport protein OS=Trifolium pratense OX=... [more]
tr|A0A2K3MJ93|A0A2K3MJ93_TRIPR1.213e-6872.39Copper transport protein OS=Trifolium pratense OX=... [more]
tr|G7JDP2|G7JDP2_MEDTR1.223e-6774.17Copper transport protein OS=Medicago truncatula OX... [more]
tr|A0A2K3K6L3|A0A2K3K6L3_TRIPR1.118e-6672.19Copper transport protein OS=Trifolium pratense OX=... [more]
tr|A0A9D4ZYE9|A0A9D4ZYE9_PEA4.443e-6683.19Copper transport protein OS=Pisum sativum OX=3888 ... [more]
tr|I3SIQ7|I3SIQ7_MEDTR3.432e-6484.17Copper transport protein OS=Medicago truncatula OX... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007274Ctr copper transporterPFAMPF04145Ctrcoord: 33..76
e-value: 0.0034
score: 29.4
coord: 87..131
e-value: 7.9E-7
score: 41.2
IPR007274Ctr copper transporterPANTHERPTHR12483SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERScoord: 28..136

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_004507092.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004507092.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004507092.3; organism=Cicer arietinum; type=mRNA; length=459bp
ATGGATGATGGTGGACACATGCACGGCATGGATGGGATGTCAATGGCACC
AAAATCATCATCCAATGGAACCATGATGATGGGTCATAAGATGCACATGA
CTTTCTTCTGGGGAAAAGACGCGTTGATTCTATTTGACGGTTGGCCTGGG
GGTAAAACCGGTATGTATGTATTGGCCTTGATTCTTGTTTTCTTCATGTC
CGTACTCATCGAATTACTTTCCCGTACCCGCTTCATTAAACCCGGTTCGA
ACCCTGTTGCGGTCGGTTTGGTTCAGACCCTTTTACATGCACTTAGGATT
GGATTAGCTTATTTGGTTATGTTGGCACTTATGTCTTTCAATGGAGGTGT
TTTCTTGGTTGCTGTTCTTGGTCATGCTCTTGGATTCTTCGTTTCTACCA
GTGCTTTCAAAAAACCTCACCACGATGACCCTTACGATCTTCCTCCCTTA
TCTTGTTAA
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protein sequence of rna-XM_004507092.3_CaCDCfrontier-NCBI_v1

>rna-XM_004507092.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004507092.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004507092.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=152bp
MDDGGHMHGMDGMSMAPKSSSNGTMMMGHKMHMTFFWGKDALILFDGWPG
GKTGMYVLALILVFFMSVLIELLSRTRFIKPGSNPVAVGLVQTLLHALRI
GLAYLVMLALMSFNGGVFLVAVLGHALGFFVSTSAFKKPHHDDPYDLPPL
SC
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mRNA from alignment at chr6:54114771..54115738+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_004507092.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004507092.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004507092.3; organism=Cicer arietinum; type=mRNA; length=968bp; location=Sequence derived from: chr6:54114771..54115738+ (Cicer arietinum
GTCACTAGTTGCCAAAATACTAAATAGGATGTGATTCAATCCACTACGGC
ACATAATATCCGTATGGTTTTGGTTGTGACCACAAATTTCGCCCCATACC
GCACAATCACCCAATAAAATCACGATCTCATTAAATTCCACGTATACTAG
TATTGTAGTACAATACAATACATATACTATACGACTCAATTTTCCTTTTG
AGCGGAAAATGTACTACCATTTCACAGATTCATCACACCAACAATCCCTA
AAGAAACTAATTATTACTCACCAAACTATATAACCATAATACAGCACAGC
ATAGCATAGCACGGCCGATTCAGATCTCACGCAAACATGGATGATGGTGG
ACACATGCACGGCATGGATGGGATGTCAATGGCACCAAAATCATCATCCA
ATGGAACCATGATGATGGGTCATAAGATGCACATGACTTTCTTCTGGGGA
AAAGACGCGTTGATTCTATTTGACGGTTGGCCTGGGGGTAAAACCGGTAT
GTATGTATTGGCCTTGATTCTTGTTTTCTTCATGTCCGTACTCATCGAAT
TACTTTCCCGTACCCGCTTCATTAAACCCGGTTCGAACCCTGTTGCGGTC
GGTTTGGTTCAGACCCTTTTACATGCACTTAGGATTGGATTAGCTTATTT
GGTTATGTTGGCACTTATGTCTTTCAATGGAGGTGTTTTCTTGGTTGCTG
TTCTTGGTCATGCTCTTGGATTCTTCGTTTCTACCAGTGCTTTCAAAAAA
CCTCACCACGATGACCCTTACGATCTTCCTCCCTTATCTTGTTAATTGTT
TTTactgtttcttttttttaataatcagaAATTTCATTTCCTGTCTTTGA
TTTTTACTCTAGGTAATTAACAAGTTTTGTAATGAATTTGTAGTTGGGTT
AAAATATAGATAGATATGCATATGTATTTTATACAGGTTCACTTTATTTG
TGTTTGATAGTTCCgtaa
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Coding sequence (CDS) from alignment at chr6:54114771..54115738+

>rna-XM_004507092.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004507092.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004507092.3; organism=Cicer arietinum; type=CDS; length=459bp; location=Sequence derived from: chr6:54114771..54115738+ (Cicer arietinum
ATGGATGATGGTGGACACATGCACGGCATGGATGGGATGTCAATGGCACC
AAAATCATCATCCAATGGAACCATGATGATGGGTCATAAGATGCACATGA
CTTTCTTCTGGGGAAAAGACGCGTTGATTCTATTTGACGGTTGGCCTGGG
GGTAAAACCGGTATGTATGTATTGGCCTTGATTCTTGTTTTCTTCATGTC
CGTACTCATCGAATTACTTTCCCGTACCCGCTTCATTAAACCCGGTTCGA
ACCCTGTTGCGGTCGGTTTGGTTCAGACCCTTTTACATGCACTTAGGATT
GGATTAGCTTATTTGGTTATGTTGGCACTTATGTCTTTCAATGGAGGTGT
TTTCTTGGTTGCTGTTCTTGGTCATGCTCTTGGATTCTTCGTTTCTACCA
GTGCTTTCAAAAAACCTCACCACGATGACCCTTACGATCTTCCTCCCTTA
TCTTGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR007274Cop_transporter
Vocabulary: Molecular Function
TermDefinition
GO:0005375copper ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0035434copper ion transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane