rna-XM_004507112.3
|
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_004507112.3 vs. Araport11
Match: | (Symbols: BTL10, RDUF1, AtRDUF1 | BCA2####zinc finger ATL 10, RING and Domain of Unknown Function 1117 1, Arabidopsis thaliana RING and Domain of Unknown Function 1117 1 | chr3:17178837-17180024 REVERSE LENGTH=395) HSP 1 Score: 298.516 bits (763), Expect = 1.557e-98 Identity = 178/372 (47.85%), Postives = 227/372 (61.02%), Query Frame = 0
Query: 12 SYWCYSCTRFINLSD----HTIIVCPHCEGGFVEEIQAGESPHHRLSPFSDDTISSRRQGFRRRRRDAGSR--SPFNPVIVLRGTGD-------DGPDQDGGS----AFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEM--NGFGRPENPPASKAAIESMPTVEICEAQVSCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDINPMETRVSGQIDEESIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMD-GGLNANGAPRRISRTIRSNRVRE----------SRGFGRAFRNFFSFFGRIGSRSGSPSSSLSTSYSGSENVSVSRSRSLVNSMF 353
SYWCYSCTRFI++ + + ++CP+C GGF+EEI+ + P S + S + R R S + FNPVIVL G G + + DG + A+E +YDDG GSGLRPLP +VSE L+GSGF+RLLEQ SQIE NG GR NPPASK+AIES+P VEI + E +CAVC E FE G+E RE+PCKHI+H DCI+PWL++RNSCPVCR ELPSD P++ +E ++G+TIWRLPGGGFAVGRF+ G GE PVV TEMD GGL +N PRRIS +R++ E RA R SF R+ GS +S++ S E ++RS SL+ F
Sbjct: 30 SYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSNSTVAAIPASTPEVRSVEETHRSIIRRRRSNRRTSFNPVIVLHGGGGGGAGERVENEEGDGATRERRAYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSD--PIQ---RSNEEEHAVGMTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMDGGGLGSNEGPRRIS-WVRAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRVRPSRGSSNSNVIDLDSDGETRVMNRSTSLIRRFF 395
BLAST of rna-XM_004507112.3 vs. Araport11
Match: | (Symbols: AtRDUF2, RDUF2, BTL09 | Arabidopsis thaliana RING and Domain of Unknown Function 1117 2, RING and Domain of Unknown Function 1117 2, BCA2####zinc finger ATL 9 | chr5:23998422-23999645 REVERSE LENGTH=407) HSP 1 Score: 281.567 bits (719), Expect = 6.904e-92 Identity = 160/302 (52.98%), Postives = 200/302 (66.23%), Query Frame = 0
Query: 11 ASYWCYSCTRFINL-SDHTI-----IVCPHCEGGFVEEIQAGESPHHRLS-PFSDDTIS-SRRQGFRRRRRDAGSRSPFNPVIVLRGTG---------DDGPDQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMN--GFGRPENPPASKAAIESMPTVEICEAQVSCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDINPMETRVSGQIDEESIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGG--LNANGAPRRIS 291
ASYWCYSCTRF+++ +D + CPHC+GGF+E+I S L+ P S + S + + RRR +G R FNPVIVL+G D D+ AFE +YDDG GSGLRPLP +VSE L+GSGF+RLLEQ SQIE + G GR NPPASK+AIES+P VEI + + E +CAVC E FE EARE+PCKH++H DCI+PWL++RNSCPVCR ELPS+ N R + ++ ++G+TIWRLPGGGFAVGRF+ GE PVV TEMDGG N+ PRRIS
Sbjct: 16 ASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSSAATELTIPASTEVRSINNNRRSVIRRRRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDR---RAFEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEPN---RRSNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGIGNSQDGPRRIS 311
BLAST of rna-XM_004507112.3 vs. Araport11
Match: | (Symbols: AtRDUF2, RDUF2, BTL09 | Arabidopsis thaliana RING and Domain of Unknown Function 1117 2, RING and Domain of Unknown Function 1117 2, BCA2####zinc finger ATL 9 | chr5:23998422-23999960 REVERSE LENGTH=512) HSP 1 Score: 283.108 bits (723), Expect = 4.079e-91 Identity = 160/302 (52.98%), Postives = 200/302 (66.23%), Query Frame = 0
Query: 11 ASYWCYSCTRFINL-SDHTI-----IVCPHCEGGFVEEIQAGESPHHRLS-PFSDDTIS-SRRQGFRRRRRDAGSRSPFNPVIVLRGTG---------DDGPDQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMN--GFGRPENPPASKAAIESMPTVEICEAQVSCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDINPMETRVSGQIDEESIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGG--LNANGAPRRIS 291
ASYWCYSCTRF+++ +D + CPHC+GGF+E+I S L+ P S + S + + RRR +G R FNPVIVL+G D D+ AFE +YDDG GSGLRPLP +VSE L+GSGF+RLLEQ SQIE + G GR NPPASK+AIES+P VEI + + E +CAVC E FE EARE+PCKH++H DCI+PWL++RNSCPVCR ELPS+ N R + ++ ++G+TIWRLPGGGFAVGRF+ GE PVV TEMDGG N+ PRRIS
Sbjct: 121 ASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSSAATELTIPASTEVRSINNNRRSVIRRRRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDR---RAFEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEPN---RRSNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGIGNSQDGPRRIS 416
BLAST of rna-XM_004507112.3 vs. Araport11
Match: | (Symbols: BTL11, RHC2A | BCA2####zinc finger ATL 11, RING-H2 finger C2A | chr2:16567506-16568711 REVERSE LENGTH=401) HSP 1 Score: 260.381 bits (664), Expect = 1.223e-83 Identity = 154/326 (47.24%), Postives = 191/326 (58.59%), Query Frame = 0
Query: 9 GTASYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQ------------AGESPHHRLSPFSDDTISSRRQGFRRRRRDA-----------GSRSPFNPVIVLRGTGDDGPDQD------GGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMN---GFGRPENPPASKAAIESMPTVEICEAQV--SCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSD--------INPMETRVSGQIDEESIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGG-LNANGAPRRIS 291
+ SYWCYSC+RF+ +SD I CP C+GGF+E IQ + HR SS D +RSP NPVIVLRG+ P D SAF+++YDDG SGLRPLPP+++EFLLGSGFDRLL+Q SQIE+N E+PPASK+AIE++P +EI + + HCAVCKE F L ARE+PC HIYH DCILPWL +RNSCPVCRHELP++ T + + ++ + GLTIWRLPGGGFAVGR GG G+ PVVYTE+DGG L PRR++
Sbjct: 2 ASGSYWCYSCSRFVWVSDS--ISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTRFPPPSSSSSTPSASMHADNSPTPTIVTRTRSNRSP-NPVIVLRGSA-AAPSSDVVSEGLDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWRGGDRMMPVVYTEVDGGRLGDERLPRRVA 323
BLAST of rna-XM_004507112.3 vs. Araport11
Match: | (Symbols: BTL11, RHC2A | BCA2####zinc finger ATL 11, RING-H2 finger C2A | chr2:16567506-16568711 REVERSE LENGTH=401) HSP 1 Score: 260.381 bits (664), Expect = 1.223e-83 Identity = 154/326 (47.24%), Postives = 191/326 (58.59%), Query Frame = 0
Query: 9 GTASYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQ------------AGESPHHRLSPFSDDTISSRRQGFRRRRRDA-----------GSRSPFNPVIVLRGTGDDGPDQD------GGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMN---GFGRPENPPASKAAIESMPTVEICEAQV--SCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSD--------INPMETRVSGQIDEESIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGG-LNANGAPRRIS 291
+ SYWCYSC+RF+ +SD I CP C+GGF+E IQ + HR SS D +RSP NPVIVLRG+ P D SAF+++YDDG SGLRPLPP+++EFLLGSGFDRLL+Q SQIE+N E+PPASK+AIE++P +EI + + HCAVCKE F L ARE+PC HIYH DCILPWL +RNSCPVCRHELP++ T + + ++ + GLTIWRLPGGGFAVGR GG G+ PVVYTE+DGG L PRR++
Sbjct: 2 ASGSYWCYSCSRFVWVSDS--ISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTRFPPPSSSSSTPSASMHADNSPTPTIVTRTRSNRSP-NPVIVLRGSA-AAPSSDVVSEGLDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWRGGDRMMPVVYTEVDGGRLGDERLPRRVA 323
BLAST of rna-XM_004507112.3 vs. Araport11
Match: | (Symbols: RZF1, BTL02, AtRZF1 | RING Zinc Finger 1, BCA2####zinc finger ATL 2 | chr3:20962563-20963525 FORWARD LENGTH=320) HSP 1 Score: 130.954 bits (328), Expect = 6.509e-35 Identity = 85/231 (36.80%), Postives = 119/231 (51.52%), Query Frame = 0
Query: 12 SYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQAGESPHHR-------------LSPFSDDTISSRR--QGFRRRRRDAGSRSPFN--PVIVLRGTGDDGPDQDGGSAFELFYDDGDGSGLRPLPPT-VSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQV-SCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELP 223
++WC+ C R + L VC +C GGFVEEI G S HR S F ++ R + R AGS S N P+++ G S+ E F + G G+ T ++ G G + L+EQ S +G PPA K++I+++PT++I + + S + HC VCK+ FEL EA+++PC HIYHSDCI+PWL NSCPVCR ELP
Sbjct: 7 THWCHRCQRAVWLRARDA-VCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSSVEAFVN-GAAPGIGIARGTNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELP 231
BLAST of rna-XM_004507112.3 vs. Araport11
Match: | (Symbols: RZF1, BTL02, AtRZF1 | RING Zinc Finger 1, BCA2####zinc finger ATL 2 | chr3:20962563-20963525 FORWARD LENGTH=320) HSP 1 Score: 130.954 bits (328), Expect = 6.509e-35 Identity = 85/231 (36.80%), Postives = 119/231 (51.52%), Query Frame = 0
Query: 12 SYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQAGESPHHR-------------LSPFSDDTISSRR--QGFRRRRRDAGSRSPFN--PVIVLRGTGDDGPDQDGGSAFELFYDDGDGSGLRPLPPT-VSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQV-SCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELP 223
++WC+ C R + L VC +C GGFVEEI G S HR S F ++ R + R AGS S N P+++ G S+ E F + G G+ T ++ G G + L+EQ S +G PPA K++I+++PT++I + + S + HC VCK+ FEL EA+++PC HIYHSDCI+PWL NSCPVCR ELP
Sbjct: 7 THWCHRCQRAVWLRARDA-VCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSSVEAFVN-GAAPGIGIARGTNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELP 231
BLAST of rna-XM_004507112.3 vs. Araport11
Match: | (Symbols: RZF1, BTL02, AtRZF1 | RING Zinc Finger 1, BCA2####zinc finger ATL 2 | chr3:20962563-20963525 FORWARD LENGTH=320) HSP 1 Score: 130.954 bits (328), Expect = 6.509e-35 Identity = 85/231 (36.80%), Postives = 119/231 (51.52%), Query Frame = 0
Query: 12 SYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQAGESPHHR-------------LSPFSDDTISSRR--QGFRRRRRDAGSRSPFN--PVIVLRGTGDDGPDQDGGSAFELFYDDGDGSGLRPLPPT-VSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQV-SCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELP 223
++WC+ C R + L VC +C GGFVEEI G S HR S F ++ R + R AGS S N P+++ G S+ E F + G G+ T ++ G G + L+EQ S +G PPA K++I+++PT++I + + S + HC VCK+ FEL EA+++PC HIYHSDCI+PWL NSCPVCR ELP
Sbjct: 7 THWCHRCQRAVWLRARDA-VCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSSVEAFVN-GAAPGIGIARGTNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELP 231
BLAST of rna-XM_004507112.3 vs. Araport11
Match: | (Symbols: RHC1A, GARU, BTL01 | GA receptor RING E3 ubiquitin ligase, RING-H2 finger C1A, BCA2####zinc finger ATL 1 | chr2:17043642-17044628 FORWARD LENGTH=328) HSP 1 Score: 127.487 bits (319), Expect = 1.579e-33 Identity = 87/253 (34.39%), Postives = 122/253 (48.22%), Query Frame = 0
Query: 12 SYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQAGESPHHRLSPF----SDDTISSRRQGF--------------------RRRRRDAGSRSPFN-----PVIVLRG------TGDDGPDQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQV-SCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDINP 228
++WC+ C R + L VC +C GGFVEE+ ++ SPF S + R Q F R R S P N P+++ G TGD+ A E ++ G G+ ++ G G + L EQ S G R PPA ++AI+++PT++I + + S + +C VCK+ FELG EA+++PC HIYHSDCI+PWL NSCPVCR ELPS P
Sbjct: 7 THWCHRCQRAVRLHGQEP-VCFYCGGGFVEELDMAQA-----SPFDMFRSHRGVVERDQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDN--------AVEALFNGGS-PGIGITRGNTGDYFFGPGLEELFEQLSA----GTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASGP 240
BLAST of rna-XM_004507112.3 vs. Araport11
Match: | (Symbols: RHC1A, GARU, BTL01 | GA receptor RING E3 ubiquitin ligase, RING-H2 finger C1A, BCA2####zinc finger ATL 1 | chr2:17043642-17044628 FORWARD LENGTH=328) HSP 1 Score: 127.487 bits (319), Expect = 1.579e-33 Identity = 87/253 (34.39%), Postives = 122/253 (48.22%), Query Frame = 0
Query: 12 SYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQAGESPHHRLSPF----SDDTISSRRQGF--------------------RRRRRDAGSRSPFN-----PVIVLRG------TGDDGPDQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQV-SCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDINP 228
++WC+ C R + L VC +C GGFVEE+ ++ SPF S + R Q F R R S P N P+++ G TGD+ A E ++ G G+ ++ G G + L EQ S G R PPA ++AI+++PT++I + + S + +C VCK+ FELG EA+++PC HIYHSDCI+PWL NSCPVCR ELPS P
Sbjct: 7 THWCHRCQRAVRLHGQEP-VCFYCGGGFVEELDMAQA-----SPFDMFRSHRGVVERDQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDN--------AVEALFNGGS-PGIGITRGNTGDYFFGPGLEELFEQLSA----GTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASGP 240
BLAST of rna-XM_004507112.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SNB6|RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 1.488e-97 Identity = 178/372 (47.85%), Postives = 227/372 (61.02%), Query Frame = 0
Query: 12 SYWCYSCTRFINLSD----HTIIVCPHCEGGFVEEIQAGESPHHRLSPFSDDTISSRRQGFRRRRRDAGSR--SPFNPVIVLRGTGD-------DGPDQDGGS----AFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEM--NGFGRPENPPASKAAIESMPTVEICEAQVSCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDINPMETRVSGQIDEESIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMD-GGLNANGAPRRISRTIRSNRVRE----------SRGFGRAFRNFFSFFGRIGSRSGSPSSSLSTSYSGSENVSVSRSRSLVNSMF 353
SYWCYSCTRFI++ + + ++CP+C GGF+EEI+ + P S + S + R R S + FNPVIVL G G + + DG + A+E +YDDG GSGLRPLP +VSE L+GSGF+RLLEQ SQIE NG GR NPPASK+AIES+P VEI + E +CAVC E FE G+E RE+PCKHI+H DCI+PWL++RNSCPVCR ELPSD P++ +E ++G+TIWRLPGGGFAVGRF+ G GE PVV TEMD GGL +N PRRIS +R++ E RA R SF R+ GS +S++ S E ++RS SL+ F
Sbjct: 30 SYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSNSTVAAIPASTPEVRSVEETHRSIIRRRRSNRRTSFNPVIVLHGGGGGGAGERVENEEGDGATRERRAYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSD--PIQ---RSNEEEHAVGMTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMDGGGLGSNEGPRRIS-WVRAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRVRPSRGSSNSNVIDLDSDGETRVMNRSTSLIRRFF 395
BLAST of rna-XM_004507112.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q940T5|RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 6.608e-91 Identity = 160/302 (52.98%), Postives = 200/302 (66.23%), Query Frame = 0
Query: 11 ASYWCYSCTRFINL-SDHTI-----IVCPHCEGGFVEEIQAGESPHHRLS-PFSDDTIS-SRRQGFRRRRRDAGSRSPFNPVIVLRGTG---------DDGPDQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMN--GFGRPENPPASKAAIESMPTVEICEAQVSCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDINPMETRVSGQIDEESIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGG--LNANGAPRRIS 291
ASYWCYSCTRF+++ +D + CPHC+GGF+E+I S L+ P S + S + + RRR +G R FNPVIVL+G D D+ AFE +YDDG GSGLRPLP +VSE L+GSGF+RLLEQ SQIE + G GR NPPASK+AIES+P VEI + + E +CAVC E FE EARE+PCKH++H DCI+PWL++RNSCPVCR ELPS+ N R + ++ ++G+TIWRLPGGGFAVGRF+ GE PVV TEMDGG N+ PRRIS
Sbjct: 16 ASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSSAATELTIPASTEVRSINNNRRSVIRRRRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDR---RAFEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEPN---RRSNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGIGNSQDGPRRIS 311
BLAST of rna-XM_004507112.3 vs. UniProtKB/Swiss-Prot
Match: sp|O22283|RHC2A_ARATH (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 1.172e-82 Identity = 154/326 (47.24%), Postives = 191/326 (58.59%), Query Frame = 0
Query: 9 GTASYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQ------------AGESPHHRLSPFSDDTISSRRQGFRRRRRDA-----------GSRSPFNPVIVLRGTGDDGPDQD------GGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMN---GFGRPENPPASKAAIESMPTVEICEAQV--SCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSD--------INPMETRVSGQIDEESIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGG-LNANGAPRRIS 291
+ SYWCYSC+RF+ +SD I CP C+GGF+E IQ + HR SS D +RSP NPVIVLRG+ P D SAF+++YDDG SGLRPLPP+++EFLLGSGFDRLL+Q SQIE+N E+PPASK+AIE++P +EI + + HCAVCKE F L ARE+PC HIYH DCILPWL +RNSCPVCRHELP++ T + + ++ + GLTIWRLPGGGFAVGR GG G+ PVVYTE+DGG L PRR++
Sbjct: 2 ASGSYWCYSCSRFVWVSDS--ISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTRFPPPSSSSSTPSASMHADNSPTPTIVTRTRSNRSP-NPVIVLRGSA-AAPSSDVVSEGLDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWRGGDRMMPVVYTEVDGGRLGDERLPRRVA 323
BLAST of rna-XM_004507112.3 vs. UniProtKB/Swiss-Prot
Match: sp|P0CH30|RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.505e-35 Identity = 85/267 (31.84%), Postives = 132/267 (49.44%), Query Frame = 0
Query: 13 YWCYSCTRFINLS---DHTIIVCPHCEGGFVEEIQAGE--------SPHHRLSPFSD-------------------------------DTISSRRQGFRRRRRDAGSRSPFNPVIVLRGTGDDGPDQDGGSAFE-LFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQVSCEMH-CAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDINPMETRVSG 235
++CY C R +N++ + CP C GF+EE +P+ PF D D + G R R G F+P ++ +D + G+ E + ++ G R LP + ++ +G G ++L++Q ++ + N +G P PASK+AIE++P V I ++ ++ E + CAVC + FE G EA+++PCKH+YH DC+LPWL + NSCPVCRHELP+D E RV G
Sbjct: 23 FFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHDLFLTLSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSGPTRSGR--GDPFAFDPFTFIQNHLNDL--RSSGAQIEFVIQNNPSDQGFR-LPANIGDYFIGPGLEQLIQQLAENDPNRYGTP---PASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYERRVRG 281
BLAST of rna-XM_004507112.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q94AK4|RZF1_ARATH (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.284e-34 Identity = 85/231 (36.80%), Postives = 119/231 (51.52%), Query Frame = 0
Query: 12 SYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQAGESPHHR-------------LSPFSDDTISSRR--QGFRRRRRDAGSRSPFN--PVIVLRGTGDDGPDQDGGSAFELFYDDGDGSGLRPLPPT-VSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQV-SCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELP 223
++WC+ C R + L VC +C GGFVEEI G S HR S F ++ R + R AGS S N P+++ G S+ E F + G G+ T ++ G G + L+EQ S +G PPA K++I+++PT++I + + S + HC VCK+ FEL EA+++PC HIYHSDCI+PWL NSCPVCR ELP
Sbjct: 7 THWCHRCQRAVWLRARDA-VCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSSVEAFVN-GAAPGIGIARGTNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELP 231
BLAST of rna-XM_004507112.3 vs. UniProtKB/Swiss-Prot
Match: sp|O22197|RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.526e-32 Identity = 87/253 (34.39%), Postives = 122/253 (48.22%), Query Frame = 0
Query: 12 SYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQAGESPHHRLSPF----SDDTISSRRQGF--------------------RRRRRDAGSRSPFN-----PVIVLRG------TGDDGPDQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQV-SCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDINP 228
++WC+ C R + L VC +C GGFVEE+ ++ SPF S + R Q F R R S P N P+++ G TGD+ A E ++ G G+ ++ G G + L EQ S G R PPA ++AI+++PT++I + + S + +C VCK+ FELG EA+++PC HIYHSDCI+PWL NSCPVCR ELPS P
Sbjct: 7 THWCHRCQRAVRLHGQEP-VCFYCGGGFVEELDMAQA-----SPFDMFRSHRGVVERDQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDN--------AVEALFNGGS-PGIGITRGNTGDYFFGPGLEELFEQLSA----GTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASGP 240
BLAST of rna-XM_004507112.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8LPN7|RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.575e-31 Identity = 76/256 (29.69%), Postives = 123/256 (48.05%), Query Frame = 0
Query: 13 YWCYSC--TRFINLSDHTIIVCPHCEGGFVEEIQAGESPHHRLS--PFSDDTISSRRQGFR-------------------------------RRRRDAGSRSPFNPVIVLRGTGDDGPDQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQVSCEMH-CAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDINPMETR 232
++CY C T I++S CP C GF+EE + +P+ L+ P S D+ F R + F+P L+ + G+ FE ++ +P ++ G G ++L++Q ++ + N +G PPASK+AI+++PTV++ + + EM+ CAVC + FE G + +++PCKH++H DC+LPWL + NSCPVCR ELP+D E R
Sbjct: 21 FFCYQCNQTVTISISSSADPFCPICNQGFLEEYE-DPNPNQSLNFNPNSSDSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTL--RSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYG---TPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENR 270
BLAST of rna-XM_004507112.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q6AVN2|SIRP1_ORYSJ (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 9.432e-31 Identity = 81/257 (31.52%), Postives = 122/257 (47.47%), Query Frame = 0
Query: 13 YWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQAGE-------SPHHRLSPFS--------------DDTISSRRQGFRRRRRDAGSR-----------------------SPFNPVIVLRGTGDDGPDQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQVSCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSD 225
YWC+ C + I + I CP C GGFVEE+ E P S ++ D+ + +GF RR R A + + FN + L+G+ D PD+ G DDG + E++LG+G LL+ ++ + + G PPA K A+E++PTV+I E + C+VC + E+G +A+++PC+H +HS CILPWL + +SCPVCR ELPS+
Sbjct: 9 YWCHECEQAIEEAMVDEIKCPSCGGGFVEEMTDEEIERLTNRQPEPGFSQWNPIEHPGETMDSDDEDNDLGREFEGFIRRHRRASTLRRVLDSIHDDLADDQERDSSILINAFNQALALQGSVLD-PDEGQGDQGGSTNDDG----------LLEEYVLGAGLSLLLQHLAESDPSRNG---TPPAKKEAVEALPTVKIEEV-----VSCSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCRFELPSE 246
BLAST of rna-XM_004507112.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q6GPV5|RN181_XENLA (E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis OX=8355 GN=rnf181 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.764e-21 Identity = 40/74 (54.05%), Postives = 50/74 (67.57%), Query Frame = 0
Query: 152 PPASKAAIESMPTVEICEAQVSCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSD 225
PPASK +ES+P V + Q + C VC FE G R+LPC+H++HS CILPWL NSCP+CRHELP+D
Sbjct: 53 PPASKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTNSCPLCRHELPTD 126
BLAST of rna-XM_004507112.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q5M974|RN181_XENTR (E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis OX=8364 GN=rnf181 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.066e-21 Identity = 39/74 (52.70%), Postives = 50/74 (67.57%), Query Frame = 0
Query: 152 PPASKAAIESMPTVEICEAQVSCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSD 225
PPA+K +ES+P V + Q + C VC FE G R+LPC+H++HS CILPWL NSCP+CRHELP+D
Sbjct: 53 PPAAKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKTNSCPLCRHELPTD 126
BLAST of rna-XM_004507112.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YMX1|A0A1S2YMX1_CICAR (RING-type E3 ubiquitin transferase OS=Cicer arietinum OX=3827 GN=LOC101489011 PE=4 SV=1) HSP 1 Score: 748.429 bits (1931), Expect = 0.000e+0 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0
Query: 1 MMNSDTQPGTASYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQAGESPHHRLSPFSDDTISSRRQGFRRRRRDAGSRSPFNPVIVLRGTGDDGPDQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQVSCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDINPMETRVSGQIDEESIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNANGAPRRISRTIRSNRVRESRGFGRAFRNFFSFFGRIGSRSGSPSSSLSTSYSGSENVSVSRSRSLVNSMFNRNSRRRRRTLVLED 368
MMNSDTQPGTASYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQAGESPHHRLSPFSDDTISSRRQGFRRRRRDAGSRSPFNPVIVLRGTGDDGPDQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQVSCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDINPMETRVSGQIDEESIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNANGAPRRISRTIRSNRVRESRGFGRAFRNFFSFFGRIGSRSGSPSSSLSTSYSGSENVSVSRSRSLVNSMFNRNSRRRRRTLVLED
Sbjct: 1 MMNSDTQPGTASYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQAGESPHHRLSPFSDDTISSRRQGFRRRRRDAGSRSPFNPVIVLRGTGDDGPDQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQVSCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDINPMETRVSGQIDEESIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNANGAPRRISRTIRSNRVRESRGFGRAFRNFFSFFGRIGSRSGSPSSSLSTSYSGSENVSVSRSRSLVNSMFNRNSRRRRRTLVLED 368
BLAST of rna-XM_004507112.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4VVY2|A0A9D4VVY2_PEA (RING-type E3 ubiquitin transferase OS=Pisum sativum OX=3888 GN=KIW84_075670 PE=4 SV=1) HSP 1 Score: 632.484 bits (1630), Expect = 0.000e+0 Identity = 330/369 (89.43%), Postives = 346/369 (93.77%), Query Frame = 0
Query: 1 MMNSDTQPGTASYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQAGESPHHRLSPFSDDTISSRRQGFRRRRRDAGSRSPFNPVIVLRGTGDDGPDQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQVSCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDI-NPMETRVSGQIDEESIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNANGAPRRISRTIRSNRVRESRGFGRAFRNFFSFFGRIGSRSGSPSSSLSTSYSGSENVSVSRSRSLVNSMFNRNSRRRRRTLVLED 368
+MNSDTQP TAS+WCYSCTRF+NLSDH+I+VCPHCE GFVEEIQAGESPHHRLSPF DD +S+RRQGFRRRRRDAGSRSPFNPVIVLRG G+DG DQ+GGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICE QVSCEMHCAVCKE FELG EARELPCKHIYHSDCILPWL+VRNSCPVCRHELPSD+ NP+E+RVSGQIDEE+IGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNANGAPRRISRT+RS+RVRESRG GRAFRNFFSFFGRIGSRS SGSENVSVSRSRSLVNSMFNRNSRRRRRTL LED
Sbjct: 22 VMNSDTQPETASFWCYSCTRFVNLSDHSIVVCPHCESGFVEEIQAGESPHHRLSPFPDDAVSTRRQGFRRRRRDAGSRSPFNPVIVLRGAGEDGTDQEGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEEQVSCEMHCAVCKEEFELGAEARELPCKHIYHSDCILPWLSVRNSCPVCRHELPSDLNNPLESRVSGQIDEEAIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNANGAPRRISRTVRSHRVRESRGIGRAFRNFFSFFGRIGSRSN----------SGSENVSVSRSRSLVNSMFNRNSRRRRRTLELED 380
BLAST of rna-XM_004507112.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3ND34|A0A2K3ND34_TRIPR (RING-type E3 ubiquitin transferase OS=Trifolium pratense OX=57577 GN=L195_g024221 PE=4 SV=1) HSP 1 Score: 620.542 bits (1599), Expect = 0.000e+0 Identity = 318/368 (86.41%), Postives = 337/368 (91.58%), Query Frame = 0
Query: 2 MNSDTQPGTASYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQAGESPHHRLSPFSDDTISSRRQGFRRRRRDAGSRSPFNPVIVLRGTGDDGPDQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQVSCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDI-NPMETRVSGQIDEESIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNANGAPRRISRTIRSNRVRESRGFGRAFRNFFSFFGRIGSRSGSPSSSLSTSYSGSENVSVSRSRSLVNSMFNRNSRRRRRTLVLED 368
MNS+TQ TASYWCYSCTRF+NL+DHT IVCPHC+ GF+EEIQAG+SPHHRLSPF D+T+SSRRQGFRRRRRDAGSRSPFNPVIVLRG G+DG DQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEI EAQVSC+MHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSD+ NP+ETRVSGQIDEE+IGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNANGAPRRISRT+RS+RV ESRG GR RNFFSFFGR GS S S S SENVSVSRSR +V+S+FNRN R RRT+ LED
Sbjct: 1 MNSETQLETASYWCYSCTRFVNLTDHTNIVCPHCDNGFIEEIQAGDSPHHRLSPFPDETVSSRRQGFRRRRRDAGSRSPFNPVIVLRGNGEDGNDQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEISEAQVSCDMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDLSNPIETRVSGQIDEEAIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNANGAPRRISRTVRSHRVTESRGIGRVIRNFFSFFGRNGS---------SRSNSASENVSVSRSRRIVSSIFNRNWRGSRRTMELED 359
BLAST of rna-XM_004507112.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6PS34|A0A2Z6PS34_TRISU (RING-type E3 ubiquitin transferase OS=Trifolium subterraneum OX=3900 GN=TSUD_88440 PE=4 SV=1) HSP 1 Score: 595.504 bits (1534), Expect = 0.000e+0 Identity = 318/371 (85.71%), Postives = 338/371 (91.11%), Query Frame = 0
Query: 1 MMNSDTQPGTASYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQAGESPHHRLSPFSDDTISSRRQGFRRRRRDAGSRSPFNPVIVLRGTGDDGPDQDG--GSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQVSCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDI-NPMETRVSGQIDEESIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNANGAPRRISRTIRSNRVRESRGFGRAFRNFFSFFGRIGSRSGSPSSSLSTSYSGSENVSVSRSRSLVNSMFNRNSRRRRRTLVLED 368
MMNS+TQP TASYWCYSCTRF+NLSDHT IVCPHC+ GF+EEIQAG+SP+HRLSPF D+T+SSRRQG R RRRDAGSRSPFNPVIVLRG G++ DQDG GSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICE QVS ++HCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSD+ NP+ETRVSGQIDEE+IGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNANGAPRRISR +RS+RV ESRG GR FRNFFSFFGRIGS S S SGSENVSVSRSRSLV+S+FNRN R RRT+ LED
Sbjct: 1 MMNSETQPETASYWCYSCTRFVNLSDHTNIVCPHCDNGFIEEIQAGDSPNHRLSPFPDETVSSRRQGSRHRRRDAGSRSPFNPVIVLRGNGEESNDQDGNGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEEQVSSDLHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDLNNPIETRVSGQIDEEAIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNANGAPRRISRAVRSHRVTESRGVGRVFRNFFSFFGRIGS---------SRSNSGSENVSVSRSRSLVSSIFNRNRRGSRRTMELED 362
BLAST of rna-XM_004507112.3 vs. UniProtKB/TrEMBL
Match: tr|G7JCE1|G7JCE1_MEDTR (RING-type E3 ubiquitin transferase OS=Medicago truncatula OX=3880 GN=11414430 PE=4 SV=1) HSP 1 Score: 588.571 bits (1516), Expect = 0.000e+0 Identity = 318/375 (84.80%), Postives = 334/375 (89.07%), Query Frame = 0
Query: 2 MNSDTQPGTASYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQAGESPHHRLSPFSDDTISSRRQGFRRRRRDAGSRSPFNPVIVLRGTGDDGPDQDG----GSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQVSCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDI-NPMETRVSGQIDEESIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNA--NGAPRRISRTIRSNRVRESRGFGRAFRNFFSFFGRIGSRSGSPSSSLSTSYSGSENV-SVSRSRSLVNSMFNRNSRRRRRTLVLED 368
MNS++ P T SYWCYSCTRFINLSDHT+IVCPHC+ GFVEEI AGESPHHRLSPF DT+SSRRQGFRRRRRDAGSRSPFNPVIVLRG GDDG +DG GSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICE VSCE+HCAVCKE FEL EARELPCKH+YHSDCILPWLTVRNSCPVCRHELPSD+ NP+ETRVSGQIDEE+IGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNA APRRISRT+R++RVRES G GR FRNFFSFFGRIGSRS S SG+ NV SVSRSRSLVNSMF+RNSRRRRR L LED
Sbjct: 1 MNSESSPETPSYWCYSCTRFINLSDHTLIVCPHCDNGFVEEIAAGESPHHRLSPFPADTVSSRRQGFRRRRRDAGSRSPFNPVIVLRGAGDDGVGEDGAGAGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEEHVSCELHCAVCKEEFELHAEARELPCKHLYHSDCILPWLTVRNSCPVCRHELPSDLNNPLETRVSGQIDEEAIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNAAQGSAPRRISRTVRAHRVRESHGIGRVFRNFFSFFGRIGSRSN------LNSNSGTGNVASVSRSRSLVNSMFSRNSRRRRRALELED 369
BLAST of rna-XM_004507112.3 vs. UniProtKB/TrEMBL
Match: tr|A0A392MRX9|A0A392MRX9_9FABA (RING-type E3 ubiquitin transferase (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0010680 PE=4 SV=1) HSP 1 Score: 548.895 bits (1413), Expect = 0.000e+0 Identity = 274/294 (93.20%), Postives = 285/294 (96.94%), Query Frame = 0
Query: 1 MMNSDTQPGTASYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQAGESPHHRLSPFSDDTISSRRQGFRRRRRDAGSRSPFNPVIVLRGTGDDGPDQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQVSCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDI-NPMETRVSGQIDEESIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNANGAPRRISRT 293
MMNS+TQP TASYWCYSCTRF+NLSDHT IVCPHC+ GFVEEIQAG+SPHHRLSPF D+T+SSRRQ FRRRRRDAGSRSPFNPVIVLRG G+DG DQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEI EAQVSC+MHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSD+ NP+ETRVSGQIDEE+IGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNANGAPRRISRT
Sbjct: 1 MMNSETQPETASYWCYSCTRFVNLSDHTNIVCPHCDNGFVEEIQAGDSPHHRLSPFPDETVSSRRQAFRRRRRDAGSRSPFNPVIVLRGNGEDGNDQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEISEAQVSCDMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDLNNPIETRVSGQIDEEAIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNANGAPRRISRT 294
BLAST of rna-XM_004507112.3 vs. UniProtKB/TrEMBL
Match: tr|A0A371H9M0|A0A371H9M0_MUCPR (RING-type E3 ubiquitin transferase (Fragment) OS=Mucuna pruriens OX=157652 GN=DURF2 PE=4 SV=1) HSP 1 Score: 524.628 bits (1350), Expect = 0.000e+0 Identity = 293/366 (80.05%), Postives = 318/366 (86.89%), Query Frame = 0
Query: 2 MNSDTQPGTASYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQAGESPHHRLSPFSDDTISSRRQGFRRRRRDAGSRSPFNPVIVLRGTGDDGPDQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQVSCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDINPMETRVSGQIDEESIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNANGAPRRISRTIRSNRVRESRGFGRAFRNFFSFFGRIGS--RSGSPSSSLSTSYSGSENVSVSRSRSLVNSMFNRNSRRRRRTLV 365
MNS+ Q GTASYWCYSCTRF++LS T I CP+C+ FVEEI+A SP HRLSPF DD +S RRQGFRRRRRDAG+RSPFNPVIVLRG GDD D DG S FELFYDDGDGSGLRPLPPT+SEFLLGSGFDRLLEQF+QIEMNGFGRPENPPASKAAIESMPTVEI EAQV + HCAVCKEAFEL EARELPCKHIYH DCILPWL +RNSCPVCRHELPSD +ETRV QIDEESIGLTIWRLPGGGFAVGRFSG R AGE+HFPVVYTEMDGGLN NGAPRRISR++R+NRVRESRGFGR RNFFSFFGR+G+ R+ S SSSLS+SYS SE+ SVSRSRS V+S+FNR+SRR RT V
Sbjct: 1 MNSEAQHGTASYWCYSCTRFVHLSVQTTIACPNCQSDFVEEIRADTSPRHRLSPFPDDPLSLRRQGFRRRRRDAGNRSPFNPVIVLRGPGDDAADHDGASTFELFYDDGDGSGLRPLPPTMSEFLLGSGFDRLLEQFAQIEMNGFGRPENPPASKAAIESMPTVEIGEAQVETDTHCAVCKEAFELHAEARELPCKHIYHPDCILPWLAMRNSCPVCRHELPSD---LETRVPSQIDEESIGLTIWRLPGGGFAVGRFSGSRRAGENHFPVVYTEMDGGLNTNGAPRRISRSVRNNRVRESRGFGRVIRNFFSFFGRLGNGSRNSSSSSSLSSSYSSSEHGSVSRSRSRVSSVFNRSSRRHSRTWV 363
BLAST of rna-XM_004507112.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445I1L7|A0A445I1L7_GLYSO (RING-type E3 ubiquitin transferase OS=Glycine soja OX=3848 GN=D0Y65_029866 PE=4 SV=1) HSP 1 Score: 518.464 bits (1334), Expect = 0.000e+0 Identity = 286/375 (76.27%), Postives = 311/375 (82.93%), Query Frame = 0
Query: 2 MNSDTQPGTASYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQAGE----SPHHRLSPFSDDTISSRRQGFRRRRRDA-GSRSPFNPVIVLRGTGDD--GPDQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQVSCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDINPMETRVSGQIDEESIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNAN-GAPRRISRTIRSNRVRESRGFGRAFRNFFSFFGRIGSRSGSPSSSLSTSYSGSENVSVSRSRSLVNSMFNRNSRRRRRTLVLED 368
MN +TQPGTASYWCYSCTRF++LS + I CPHC+ GFVEEI+AG SP HRLSPF DD + RRQGFRRRRR+A G+RSPFNPVIVLRG GDD D DG S FELFYDDGDG+GLRPLPPT+SE LLGSGFDRLLEQF+QIEMNGFGRPENPPASKAAIESMPTVEI E V E HCAVCKEAFEL EARELPCKHIYHSDCILPWL++RNSCPVCRHELPSD +ETRV QIDEE+IGLTIWRLPGGGFAVGRFSGGR GESHFPVVYTEMDGGLN N GAPRRISR++RSNRVRESRGFGR NFFSFFGRIGSR+ S S + SVSRSRS V+S+FNR+SRR RT V++D
Sbjct: 1 MNLETQPGTASYWCYSCTRFVHLSVQSTIACPHCQSGFVEEIRAGAGAEASPRHRLSPFPDDPLLLRRQGFRRRRREASGNRSPFNPVIVLRGPGDDSAAADHDGVSTFELFYDDGDGTGLRPLPPTMSELLLGSGFDRLLEQFAQIEMNGFGRPENPPASKAAIESMPTVEIGETHVETEAHCAVCKEAFELHAEARELPCKHIYHSDCILPWLSMRNSCPVCRHELPSD---LETRVPSQIDEETIGLTIWRLPGGGFAVGRFSGGRRTGESHFPVVYTEMDGGLNTNGGAPRRISRSVRSNRVRESRGFGRVISNFFSFFGRIGSRN-----------SSSGHGSVSRSRSHVSSIFNRSSRRHSRTWVMDD 361
BLAST of rna-XM_004507112.3 vs. UniProtKB/TrEMBL
Match: tr|I1LJZ8|I1LJZ8_SOYBN (RING-type E3 ubiquitin transferase OS=Glycine max OX=3847 GN=100804867 PE=4 SV=1) HSP 1 Score: 518.464 bits (1334), Expect = 0.000e+0 Identity = 286/375 (76.27%), Postives = 311/375 (82.93%), Query Frame = 0
Query: 2 MNSDTQPGTASYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQAGE----SPHHRLSPFSDDTISSRRQGFRRRRRDA-GSRSPFNPVIVLRGTGDD--GPDQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQVSCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDINPMETRVSGQIDEESIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNAN-GAPRRISRTIRSNRVRESRGFGRAFRNFFSFFGRIGSRSGSPSSSLSTSYSGSENVSVSRSRSLVNSMFNRNSRRRRRTLVLED 368
MN +TQPGTASYWCYSCTRF++LS + I CPHC+ GFVEEI+AG SP HRLSPF DD + RRQGFRRRRR+A G+RSPFNPVIVLRG GDD D DG S FELFYDDGDG+GLRPLPPT+SE LLGSGFDRLLEQF+QIEMNGFGRPENPPASKAAIESMPTVEI E V E HCAVCKEAFEL EARELPCKHIYHSDCILPWL++RNSCPVCRHELPSD +ETRV QIDEE+IGLTIWRLPGGGFAVGRFSGGR GESHFPVVYTEMDGGLN N GAPRRISR++RSNRVRESRGFGR NFFSFFGRIGSR+ S S + SVSRSRS V+S+FNR+SRR RT V++D
Sbjct: 1 MNLETQPGTASYWCYSCTRFVHLSVQSTIACPHCQSGFVEEIRAGAGAEASPRHRLSPFPDDPLLLRRQGFRRRRREASGNRSPFNPVIVLRGPGDDSAAADHDGVSTFELFYDDGDGTGLRPLPPTMSELLLGSGFDRLLEQFAQIEMNGFGRPENPPASKAAIESMPTVEIGETHVETEAHCAVCKEAFELHAEARELPCKHIYHSDCILPWLSMRNSCPVCRHELPSD---LETRVPSQIDEETIGLTIWRLPGGGFAVGRFSGGRRTGESHFPVVYTEMDGGLNTNGGAPRRISRSVRSNRVRESRGFGRVISNFFSFFGRIGSRN-----------SSSGHGSVSRSRSHVSSIFNRSSRRHSRTWVMDD 361
BLAST of rna-XM_004507112.3 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6LJ79|A0A4D6LJ79_VIGUN (RING-type E3 ubiquitin transferase OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g2920 PE=4 SV=1) HSP 1 Score: 516.538 bits (1329), Expect = 0.000e+0 Identity = 263/321 (81.93%), Postives = 282/321 (87.85%), Query Frame = 0
Query: 2 MNSDTQPGTASYWCYSCTRFINLSDHTIIVCPHCEGGFVEEIQAGESPHHRLSPFSDDTISSRRQGFRRRRRDA-GSRSPFNPVIVLRGTGDD-GPDQDGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEAQVSCEMHCAVCKEAFELGVEARELPCKHIYHSDCILPWLTVRNSCPVCRHELPSDINPMETRVSGQIDEESIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMDGGLNANGAPRRISRTIRSNRVRESRGFGRAFRNFFSFFGRIG 320
MNSDTQ GT SYWCYSCTRF++LS I CPHC+ GFVEEI+A SP HRLSPF DD +S RRQGFRRRRRDA G+RSPFNPVIVLRG GDD + +G S FELFYDDGDG+GLRPLPPT+SEFLLGSGFDRLLEQF+QIEMNGFGRPENPPASKAAIESMPTVEI E QV + HCAVCKEAFEL EARELPCKHIYHSDCILPWL++RNSCPVCRHELPSD +ETR QIDEE+IGLTIWRLPGGGFAVGRFSGGR AGE+HFPVVYTEMDGGLN NGAPRRISR++RSNRVRESRGFGR RNFFSFFGRIG
Sbjct: 1 MNSDTQHGTPSYWCYSCTRFVHLSSEATIACPHCQSGFVEEIRADASPRHRLSPFPDDHLSLRRQGFRRRRRDAAGNRSPFNPVIVLRGPGDDSAAEHEGASTFELFYDDGDGTGLRPLPPTMSEFLLGSGFDRLLEQFAQIEMNGFGRPENPPASKAAIESMPTVEIGETQVETDAHCAVCKEAFELHAEARELPCKHIYHSDCILPWLSMRNSCPVCRHELPSD---LETRAPSQIDEEAIGLTIWRLPGGGFAVGRFSGGRRAGENHFPVVYTEMDGGLNTNGAPRRISRSVRSNRVRESRGFGRVVRNFFSFFGRIG 318 The following BLAST results are available for this feature:
BLAST of rna-XM_004507112.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11) Total hits: 10
BLAST of rna-XM_004507112.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot) Total hits: 10
BLAST of rna-XM_004507112.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_004507112.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004507112.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004507112.3; organism=Cicer arietinum; type=mRNA; length=1107bpback to top protein sequence of rna-XM_004507112.3_CaCDCfrontier-NCBI_v1 >rna-XM_004507112.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004507112.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004507112.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=368bpback to top mRNA from alignment at chr6:54268313..54269893+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_004507112.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004507112.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004507112.3; organism=Cicer arietinum; type=mRNA; length=1581bp; location=Sequence derived from: chr6:54268313..54269893+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at chr6:54268313..54269893+ >rna-XM_004507112.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004507112.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004507112.3; organism=Cicer arietinum; type=CDS; length=1107bp; location=Sequence derived from: chr6:54268313..54269893+ (Cicer arietinumback to top |