rna-XM_004509007.3

Transcript Overview
Namerna-XM_004509007.3
Unique Namerna-XM_004509007.3_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length1563
Productprotein SHORT-ROOT-like
References
External references for this mRNA
DatabaseAccession
GeneID101506038
GenBankXM_004509007.3
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr7chromosomechr7:11428681..11430683 -Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascanL078Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cacanL204Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascanL539Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ancanL0451Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0452Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0489Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascanL630Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cacanL317Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cacanL346Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0730Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0919Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cancanL169Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cancanR199Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanL0644Cicer arietinum ICC 4958 genome v2Cicer arietinum
caicanL0797Cicer arietinum ICC 4958 genome v2Cicer arietinum
caicanL0865Cicer arietinum ICC 4958 genome v2Cicer arietinum
canccR0965Cajanus cajan Asha genome v1.0Cajanus cajan
canccR1017Cajanus cajan Asha genome v1.0Cajanus cajan
canccR1023Cajanus cajan Asha genome v1.0Cajanus cajan
canccR1024Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR734Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR789Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR846Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canvrvR571Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR523Vicia faba cv. Tiffany genome v1.0Vicia faba
canvrvR618Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canvfhR540Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canpvR666Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cantifR568Vicia faba cv. Tiffany genome v1.0Vicia faba
canpvR681Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvfhR578Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvssR662Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR682Vicia sativa cv. Studenica genome v1.0Vicia sativa
canzwsR479Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR518Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuaR523Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canzwsR491Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuR556Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuR571Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canpsR609Pisum sativum Cameor genome v1aPisum sativum
canpsR615Pisum sativum Cameor genome v1aPisum sativum
avjcanL269Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL527Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL634Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR494Cicer arietinum
cancarR516Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Vigun02g151900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Tiffany.R1.1g303920.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Cr_19764.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
evm.model.Chr03.2491Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_014650593.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg18057.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Va06G007920.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat02G0501800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-TanjilR_27859Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Va01G076760.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Tiffany.R1.4g100480.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Hedin2.R1.4g130040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.model.Chr02.1478Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_014664471.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg3615.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
LR48_mrnaVigan06g025200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Phvul.002G010700.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-TanjilR_25914Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.003G235000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Hedin2.R1.1g373560.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-KK1_030987Cajanus cajan Asha genome v1.0Cajanus cajan
Cr_21691.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigun03g287000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-KK1_025684Cajanus cajan Asha genome v1.0Cajanus cajan
LR48_mrnaVigan01g197400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Psat04G0251400-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Ca_20844.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_09352Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Ca_18426.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-XM_004511778.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_02226Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101506038gene-LOC101506038_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_004509007.3-1exon-XM_004509007.3-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_004509064.1cds-XP_004509064.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_004509007.3_CaCDCfrontier-NCBI_v1rna-XM_004509007.3_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_004509007.3_CaCDCfrontier-NCBI_v1rna-XM_004509007.3_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


Homology
BLAST of rna-XM_004509007.3 vs. Araport11
Match: | (Symbols: SHR, SGR7, EAL1 | SHOOT GRAVITROPISM 7, ENDODERMAL-AMYLOPLAST LESS 1, SHORT ROOT | chr4:17691871-17693466 FORWARD LENGTH=531)

HSP 1 Score: 532.332 bits (1370), Expect = 0.000e+0
Identity = 300/550 (54.55%), Postives = 380/550 (69.09%), Query Frame = 0
Query:    1 MDTLFRLVNFQQHHHHHHHQPDPSLNSTTTLTTSSSSRSSTQTPPTTTYHYYQQQQQQEDEECFNYYYMDNNNNDEDLSSSSSKQQ---------YYYPYQP--QHHVSTITTPNTTFNNTINTPTTT------DNYSFSPPQDYFNFEILSGNSWAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTL--SFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTA---VNGGSI-QKVMKEIGARMEKFARLMGVPFKFNVV--FCDLRELNLNLSKLDIREDEALAINCVNSLHSVSGAGNHRDALISLLRGLEPRVMTVVEEEADL----EYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREG-WSMTQCSSDDNSNGIFLLWKDQPVVWASVWRP 520
            MDTLFRLV+ QQ           S +  T  ++ S + ++T   P T YHY    Q    EECFN++      ++EDLSSSSS            YY P+    Q+H +T +TP++T          +      D  +FS PQ   +F+  +   WA ++LLE ARA SD + T R QQ++W LNELSSPYGDT+QK+ASYFLQALF+R+  +G+R Y+T+  + A++K CSF+STRK +LKFQEVSPW TFGHVA NGAILEA++G  K+HI+DIS+T+CTQWPTLLEALATRSDDTPHLRLTTVV A   VN  +   ++MKEIG RMEKFARLMGVPFKFN++    DL E +LN  +LD++ DE LAINCV ++H ++  G+ RDA+IS  R L PR++TVVEEEADL    E  F  EF+ GFGECLRWFRV FE+ EESF RTS E+L+LER AGRAIVDL++C+P +S ERRE A +W RR+   G   V +S+E+ DDVRALLRRY+EG WSM QC    ++ GIFL W+DQPVVWAS WRP
Sbjct:    1 MDTLFRLVSLQQQQQ--------SDSIITNQSSLSRTSTTTTGSPQTAYHY-NFPQNDVVEECFNFFM-----DEEDLSSSSSHHNHHNHNNPNTYYSPFTTPTQYHPATSSTPSSTAAAAALASPYSSSGHHNDPSAFSIPQTPPSFDFSANAKWADSVLLEAARAFSDKD-TARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLN--ELDVKPDEVLAINCVGAMHGIASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRYKEGVWSMVQCP---DAAGIFLCWRDQPVVWASAWRP 530          
BLAST of rna-XM_004509007.3 vs. Araport11
Match: | (Symbols: SCL21 | SCARECROW-like 21 | chr2:1720575-1721816 REVERSE LENGTH=413)

HSP 1 Score: 190.66 bits (483), Expect = 6.165e-55
Identity = 120/386 (31.09%), Postives = 204/386 (52.85%), Query Frame = 0
Query:  143 ILLETARAISDNNNTNRIQQLMWMLNELS---SPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLH-----SVSGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREA-GRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWR 519
            +L+  A+A+S+NN    +    W + EL    S  G+  Q++ +Y L+ L +R+  +G   YK+L     +   F S   +L    EV P+  FG+++ NGAI EA++   ++HIID      +QW  L++A A R    P++R    +T V  GS+   +K+   R+EK A+   VPF+FN V        + +  LD+R+ EAL +N    LH     SVS   NHRD L+ +++ L P+V+T+VE+E +     +S F+  F E L ++   FE+++    R   E++ +E+    R +V++I+C+  E +ER E+  +W+ R    G      S  I   +RALLR Y  G+++     ++    ++L W D+ +V +  W+
Sbjct:   53 VLVACAKAVSENN----LLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKSLQSREPESYEFLSYVYVL---HEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWIALIQAFAARPGGAPNIR----ITGVGDGSVLVTVKK---RLEKLAKKFDVPFRFNAV--SRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVS-MENHRDRLLRMVKSLSPKVVTLVEQECNTN---TSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAI-----EERDGALYLGWMDRILVSSCAWK 413          
BLAST of rna-XM_004509007.3 vs. Araport11
Match: | (Symbols: SCL5 | scarecrow-like 5 | chr1:18737398-18738978 REVERSE LENGTH=526)

HSP 1 Score: 187.578 bits (475), Expect = 9.831e-53
Identity = 118/401 (29.43%), Postives = 204/401 (50.87%), Query Frame = 0
Query:  128 YFNFEILSGNSWAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQ----EVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLHSVSGAG----NHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREA-GRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWR 519
            Y + E++S       +L E A+A+ +N +      L+  L ++ S  G+  Q++ +Y L+ L +R+  +G   YK L       C  D T   LL +     E  P+  FG+ + NGAI EA++    +HIID   +   QW +L+ AL  R    P++R+T +    +  + Q  ++ +G R+ K A + GVPF+F+       E+ +   KL +R  EALA+N    LH +        NHRD L+ L++ L P V+T+VE+EA+     ++ F+  F E +  +   FE+++   +R   E++ +E+    R +V+LI+C+  E  ER E   +WR R H  G      S  +   ++ LL  Y E +++     ++    ++L WK+QP++ +  WR
Sbjct:  145 YRSMEMISRGDLK-GVLYECAKAV-ENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKALR------CK-DPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGAALCCTEVEIE--KLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTLVEQEANTN---TAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTL-----EERDGALYLGWKNQPLITSCAWR 526          
BLAST of rna-XM_004509007.3 vs. Araport11
Match: | (Symbols: SCL5 | scarecrow-like 5 | chr1:18737398-18739547 REVERSE LENGTH=597)

HSP 1 Score: 188.348 bits (477), Expect = 1.900e-52
Identity = 118/401 (29.43%), Postives = 204/401 (50.87%), Query Frame = 0
Query:  128 YFNFEILSGNSWAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQ----EVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLHSVSGAG----NHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREA-GRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWR 519
            Y + E++S       +L E A+A+ +N +      L+  L ++ S  G+  Q++ +Y L+ L +R+  +G   YK L       C  D T   LL +     E  P+  FG+ + NGAI EA++    +HIID   +   QW +L+ AL  R    P++R+T +    +  + Q  ++ +G R+ K A + GVPF+F+       E+ +   KL +R  EALA+N    LH +        NHRD L+ L++ L P V+T+VE+EA+     ++ F+  F E +  +   FE+++   +R   E++ +E+    R +V+LI+C+  E  ER E   +WR R H  G      S  +   ++ LL  Y E +++     ++    ++L WK+QP++ +  WR
Sbjct:  216 YRSMEMISRGDLK-GVLYECAKAV-ENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKALR------CK-DPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGAALCCTEVEIE--KLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTLVEQEANTN---TAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTL-----EERDGALYLGWKNQPLITSCAWR 597          
BLAST of rna-XM_004509007.3 vs. Araport11
Match: | (Symbols: SCL5 | scarecrow-like 5 | chr1:18737398-18739559 REVERSE LENGTH=601)

HSP 1 Score: 187.963 bits (476), Expect = 2.852e-52
Identity = 118/401 (29.43%), Postives = 204/401 (50.87%), Query Frame = 0
Query:  128 YFNFEILSGNSWAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQ----EVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLHSVSGAG----NHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREA-GRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWR 519
            Y + E++S       +L E A+A+ +N +      L+  L ++ S  G+  Q++ +Y L+ L +R+  +G   YK L       C  D T   LL +     E  P+  FG+ + NGAI EA++    +HIID   +   QW +L+ AL  R    P++R+T +    +  + Q  ++ +G R+ K A + GVPF+F+       E+ +   KL +R  EALA+N    LH +        NHRD L+ L++ L P V+T+VE+EA+     ++ F+  F E +  +   FE+++   +R   E++ +E+    R +V+LI+C+  E  ER E   +WR R H  G      S  +   ++ LL  Y E +++     ++    ++L WK+QP++ +  WR
Sbjct:  220 YRSMEMISRGDLK-GVLYECAKAV-ENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKALR------CK-DPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGAALCCTEVEIE--KLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTLVEQEANTN---TAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTL-----EERDGALYLGWKNQPLITSCAWR 601          
BLAST of rna-XM_004509007.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:18522570-18523802 FORWARD LENGTH=410)

HSP 1 Score: 179.104 bits (453), Expect = 1.146e-50
Identity = 123/396 (31.06%), Postives = 201/396 (50.76%), Query Frame = 0
Query:  143 ILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFA--SDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGS--IQKVMKEIGARMEKFARLMGVPFKFNVV---FCD-----LRELNLNLSKLDIREDEALAINCVNSLHSV------SGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWRP 520
            +LL  A AI D+N+     Q++W+LN ++ P GD+ Q++ S FL+AL SR          T+SF   +D++  F      L  F +++PW  FG +A N AIL A+EG   +HI+D+S T+C Q PTL++A+A+R +  P L   TVV++ +     I    +E+G+++  FA    +  +F +V   + D     L++L +  S      +EAL +NC   L  +      S + + R   +  LR L PR++T++EE+ DL    S   V        +F + F+  +   S    ++   E E    I ++++ +  E VER E   RW  R+       V   E+   DV+A+L  +  GW M +   +D+   + L WK   VV+A+VW P
Sbjct:   30 LLLHCATAI-DSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTLSSTISFLPQADELHRFSVVE--LAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFATTRNITMEFTIVPSTYSDGFSSLLQQLRIYPSSF----NEALVVNCHMMLRYIPEEPLTSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLT---SENLVNRLKSAFNYFWIPFDTTDTFMSE---QRRWYEAEISWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHAVGWGMKK---EDDDESLVLTWKGHSVVFATVWVP 409          
BLAST of rna-XM_004509007.3 vs. Araport11
Match: | (Symbols: PAT1 | phytochrome a signal transduction 1 | chr5:19522497-19524053 REVERSE LENGTH=490)

HSP 1 Score: 171.4 bits (433), Expect = 3.789e-47
Identity = 107/386 (27.72%), Postives = 201/386 (52.07%), Query Frame = 0
Query:  144 LLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSF----ASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLH-----SVSGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREA-GRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWR 519
            L+  A+A+S+N+       +M  L ++ S  G+  Q++ +Y L+ L +++  +G   YK L+     AS ++ S+      +    EV P+  FG+++ NGAI EA++   ++HIID      +QW TL++A A R    P +R+T +    +  +    +  +G R+ K A+   VPF+FN V   +    +    L +R  EALA+N    LH     SVS   NHRD L+ +++ L P+V+T+VE+E++     ++ F   F E + ++   FE+++ +  R   +++ +E+    R +V++I+C+  + VER E+  +WR R    G      S  +   +++LLR Y + + +     ++    ++L W  + +V +  W+
Sbjct:  123 LVSCAKAMSEND-LMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEPASTELLSY------MHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSV--SVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVS-TENHRDRLLRMVKSLSPKVVTLVEQESNTN---TAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRL-----EERDGALYLGWMHRDLVASCAWK 490          
BLAST of rna-XM_004509007.3 vs. Araport11
Match: | (Symbols: PAT1 | phytochrome a signal transduction 1 | chr5:19522497-19524053 REVERSE LENGTH=490)

HSP 1 Score: 171.4 bits (433), Expect = 3.789e-47
Identity = 107/386 (27.72%), Postives = 201/386 (52.07%), Query Frame = 0
Query:  144 LLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSF----ASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLH-----SVSGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREA-GRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWR 519
            L+  A+A+S+N+       +M  L ++ S  G+  Q++ +Y L+ L +++  +G   YK L+     AS ++ S+      +    EV P+  FG+++ NGAI EA++   ++HIID      +QW TL++A A R    P +R+T +    +  +    +  +G R+ K A+   VPF+FN V   +    +    L +R  EALA+N    LH     SVS   NHRD L+ +++ L P+V+T+VE+E++     ++ F   F E + ++   FE+++ +  R   +++ +E+    R +V++I+C+  + VER E+  +WR R    G      S  +   +++LLR Y + + +     ++    ++L W  + +V +  W+
Sbjct:  123 LVSCAKAMSEND-LMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEPASTELLSY------MHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSV--SVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVS-TENHRDRLLRMVKSLSPKVVTLVEQESNTN---TAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRL-----EERDGALYLGWMHRDLVASCAWK 490          
BLAST of rna-XM_004509007.3 vs. Araport11
Match: | (Symbols: PAT1 | phytochrome a signal transduction 1 | chr5:19522497-19524053 REVERSE LENGTH=490)

HSP 1 Score: 171.4 bits (433), Expect = 3.789e-47
Identity = 107/386 (27.72%), Postives = 201/386 (52.07%), Query Frame = 0
Query:  144 LLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSF----ASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLH-----SVSGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREA-GRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWR 519
            L+  A+A+S+N+       +M  L ++ S  G+  Q++ +Y L+ L +++  +G   YK L+     AS ++ S+      +    EV P+  FG+++ NGAI EA++   ++HIID      +QW TL++A A R    P +R+T +    +  +    +  +G R+ K A+   VPF+FN V   +    +    L +R  EALA+N    LH     SVS   NHRD L+ +++ L P+V+T+VE+E++     ++ F   F E + ++   FE+++ +  R   +++ +E+    R +V++I+C+  + VER E+  +WR R    G      S  +   +++LLR Y + + +     ++    ++L W  + +V +  W+
Sbjct:  123 LVSCAKAMSEND-LMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEPASTELLSY------MHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSV--SVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVS-TENHRDRLLRMVKSLSPKVVTLVEQESNTN---TAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRL-----EERDGALYLGWMHRDLVASCAWK 490          
BLAST of rna-XM_004509007.3 vs. Araport11
Match: | (Symbols: PAT1 | phytochrome a signal transduction 1 | chr5:19522497-19524053 REVERSE LENGTH=490)

HSP 1 Score: 171.4 bits (433), Expect = 3.789e-47
Identity = 107/386 (27.72%), Postives = 201/386 (52.07%), Query Frame = 0
Query:  144 LLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSF----ASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLH-----SVSGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREA-GRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWR 519
            L+  A+A+S+N+       +M  L ++ S  G+  Q++ +Y L+ L +++  +G   YK L+     AS ++ S+      +    EV P+  FG+++ NGAI EA++   ++HIID      +QW TL++A A R    P +R+T +    +  +    +  +G R+ K A+   VPF+FN V   +    +    L +R  EALA+N    LH     SVS   NHRD L+ +++ L P+V+T+VE+E++     ++ F   F E + ++   FE+++ +  R   +++ +E+    R +V++I+C+  + VER E+  +WR R    G      S  +   +++LLR Y + + +     ++    ++L W  + +V +  W+
Sbjct:  123 LVSCAKAMSEND-LMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEPASTELLSY------MHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSV--SVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVS-TENHRDRLLRMVKSLSPKVVTLVEQESNTN---TAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRL-----EERDGALYLGWMHRDLVASCAWK 490          
BLAST of rna-XM_004509007.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SZF7|SHR_ARATH (Protein SHORT-ROOT OS=Arabidopsis thaliana OX=3702 GN=SHR PE=1 SV=1)

HSP 1 Score: 532.332 bits (1370), Expect = 0.000e+0
Identity = 300/550 (54.55%), Postives = 380/550 (69.09%), Query Frame = 0
Query:    1 MDTLFRLVNFQQHHHHHHHQPDPSLNSTTTLTTSSSSRSSTQTPPTTTYHYYQQQQQQEDEECFNYYYMDNNNNDEDLSSSSSKQQ---------YYYPYQP--QHHVSTITTPNTTFNNTINTPTTT------DNYSFSPPQDYFNFEILSGNSWAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTL--SFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTA---VNGGSI-QKVMKEIGARMEKFARLMGVPFKFNVV--FCDLRELNLNLSKLDIREDEALAINCVNSLHSVSGAGNHRDALISLLRGLEPRVMTVVEEEADL----EYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREG-WSMTQCSSDDNSNGIFLLWKDQPVVWASVWRP 520
            MDTLFRLV+ QQ           S +  T  ++ S + ++T   P T YHY    Q    EECFN++      ++EDLSSSSS            YY P+    Q+H +T +TP++T          +      D  +FS PQ   +F+  +   WA ++LLE ARA SD + T R QQ++W LNELSSPYGDT+QK+ASYFLQALF+R+  +G+R Y+T+  + A++K CSF+STRK +LKFQEVSPW TFGHVA NGAILEA++G  K+HI+DIS+T+CTQWPTLLEALATRSDDTPHLRLTTVV A   VN  +   ++MKEIG RMEKFARLMGVPFKFN++    DL E +LN  +LD++ DE LAINCV ++H ++  G+ RDA+IS  R L PR++TVVEEEADL    E  F  EF+ GFGECLRWFRV FE+ EESF RTS E+L+LER AGRAIVDL++C+P +S ERRE A +W RR+   G   V +S+E+ DDVRALLRRY+EG WSM QC    ++ GIFL W+DQPVVWAS WRP
Sbjct:    1 MDTLFRLVSLQQQQQ--------SDSIITNQSSLSRTSTTTTGSPQTAYHY-NFPQNDVVEECFNFFM-----DEEDLSSSSSHHNHHNHNNPNTYYSPFTTPTQYHPATSSTPSSTAAAAALASPYSSSGHHNDPSAFSIPQTPPSFDFSANAKWADSVLLEAARAFSDKD-TARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLN--ELDVKPDEVLAINCVGAMHGIASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRYKEGVWSMVQCP---DAAGIFLCWRDQPVVWASAWRP 530          
BLAST of rna-XM_004509007.3 vs. UniProtKB/Swiss-Prot
Match: sp|A2YN56|SHR1_ORYSI (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica OX=39946 GN=SHR1 PE=3 SV=1)

HSP 1 Score: 448.358 bits (1152), Expect = 3.963e-151
Identity = 267/569 (46.92%), Postives = 352/569 (61.86%), Query Frame = 0
Query:   14 HHHHHHQPDPSLNSTTTLTTSSSSRSSTQTPPTTTYHYYQQQQQQEDEECFNYYYMDNNNNDEDLSSSSSKQQYYY--PYQPQHHVSTITTPNTTFNNTINTPTTTD----------NYSFSPPQDYFNFEILSGNS-----------------WAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILE--------ALEGNPKLHIIDISNTYCTQWPTLLEALATRS-DDTPHLRLTTVVTAVNGGS---IQKVMKEIGARMEKFARLMGVPFKFNVVF--CDLRELNLNLSKLDIRED---EALAINCVNSLHSV-SGAGNHRDALISLLRGLEPRVMTVVEEEADLEYC-------------FSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNS--NGIFLLWKDQPVVWASVWRP 520
            + ++HH    S NS              Q PP + Y+Y +  Q++      +  YMD     ED SSSSS + +++  P Q Q   ++ T   T     ++T +T            + SF PP    +F   + +S                 WA  +LLE AR+++   ++ R+QQLMWMLNEL+SPYGD +QK+ASYFLQ LF+R+  +G RT +TL+ ASD+  SFDSTR+  L+FQE+SPW++FGHVA NGAILE        A     + HI+D+SNT+CTQWPTLLEALATRS D+TPHL +TTVV+A        +Q+VM+EIG RMEKFARLMGVPF+F  V    DL EL+L+   LD+RE     ALA+NCVNSL  V  G    RDA  + LR L+PRV+TVVEEEADL                  + F++ FGE LR+F  Y ++LEESF +TS E+L LER AGRAIVDL+SC   ES+ERRE A+ W RR+   G + V+FSE++ DDVR+LLRRYREGWSM +  +DD++   G+FL WK+QP+VWAS WRP
Sbjct:   47 YSYYHH----SSNSGGGGGGGGGYYYGGQQPPPSQYYYLEPYQEECGNAPHHQLYMD-----EDFSSSSSSRHFHHGAPVQQQQPPASSTPTGTAPTPPLSTSSTAAGAGHGLFEAADLSF-PPDLNLDFSSPASSSGGGTASSGAVGGGGGGRWASQLLLECARSVA-ARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASGQRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEVAAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAVQRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLD--ALDLREGGATTALAVNCVNSLRGVVPGRARRRDAFAASLRRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSMREAGTDDSAAGAGVFLAWKEQPLVWASAWRP 602          
BLAST of rna-XM_004509007.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8H2X8|SHR1_ORYSJ (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR1 PE=1 SV=2)

HSP 1 Score: 444.121 bits (1141), Expect = 1.648e-149
Identity = 266/569 (46.75%), Postives = 351/569 (61.69%), Query Frame = 0
Query:   14 HHHHHHQPDPSLNSTTTLTTSSSSRSSTQTPPTTTYHYYQQQQQQEDEECFNYYYMDNNNNDEDLSSSSSKQQYYYP--YQPQHHVSTITTPNTTFNNTINTPTTTD----------NYSFSPPQDYFNFEILSGNS-----------------WAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILE--------ALEGNPKLHIIDISNTYCTQWPTLLEALATRS-DDTPHLRLTTVVTAVNGGS---IQKVMKEIGARMEKFARLMGVPFKFNVVF--CDLRELNLNLSKLDIRED---EALAINCVNSLHSV-SGAGNHRDALISLLRGLEPRVMTVVEEEADLEYC-------------FSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNS--NGIFLLWKDQPVVWASVWRP 520
            + ++HH    S NS              Q PP + Y+Y +  Q++      +  YMD     ED SSSSS + +++    Q Q   ++ T   T     ++T +T            + SF PP    +F   + +S                 WA  +LLE AR+++   ++ R+QQLMWMLNEL+SPYGD +QK+ASYFLQ LF+R+  +G RT +TL+ ASD+  SFDSTR+  L+FQE+SPW++FGHVA NGAILE        A     + HI+D+SNT+CTQWPTLLEALATRS D+TPHL +TTVV+A        +Q+VM+EIG RMEKFARLMGVPF+F  V    DL EL+L+   LD+RE     ALA+NCVNSL  V  G    RDA  + LR L+PRV+TVVEEEADL                  + F++ FGE LR+F  Y ++LEESF +TS E+L LER AGRAIVDL+SC   ES+ERRE A+ W RR+   G + V+FSE++ DDVR+LLRRYREGWSM +  +DD++   G+FL WK+QP+VWAS WRP
Sbjct:   47 YSYYHH----SSNSGGGGGGGGGYYYGGQQPPPSQYYYLEPYQEECGNAPHHQLYMD-----EDFSSSSSSRHFHHGARVQQQQPPASSTPTGTAPTPPLSTSSTAAGAGHGLFEAADLSF-PPDLNLDFSSPASSSGGGTASSGAVGGGGGGRWASQLLLECARSVA-ARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEVAAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAVQRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLD--ALDLREGGATTALAVNCVNSLRGVVPGRARRRDAFAASLRRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSMREAGTDDSAAGAGVFLAWKEQPLVWASAWRP 602          
BLAST of rna-XM_004509007.3 vs. UniProtKB/Swiss-Prot
Match: sp|A2XIA8|SHR2_ORYSI (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica OX=39946 GN=SHR2 PE=3 SV=1)

HSP 1 Score: 431.795 bits (1109), Expect = 1.367e-144
Identity = 234/421 (55.58%), Postives = 291/421 (69.12%), Query Frame = 0
Query:  139 WAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEAL-----------------EGNP--KLHIIDISNTYCTQWPTLLEALATR-SDDTPHLRLTTVV-TAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIRED---EALAINCVNSLHSVSGAGNHRDALISLLRGLEPRVMTVVEEEADL---EYCFSSE------FVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSM------TQCSSDDNSNGIFLLWKDQPVVWASVWRP 520
            WA  +L+E ARA++   ++ R+QQLMWMLNEL+SPYGD DQK+ASYFLQ LF+R+  +G RT +TL+ ASD+  SFDSTR+  LKFQE+SPWT FGHVA NGAILE+                     P  +LHI+D+SNT+CTQWPTLLEALATR SDDTPHL +TTVV TA    + Q+VM+EIG R+EKFARLMGVPF F  V       +L+L+ LD+RE     ALA+NCVN+L    G    RDA ++ LR LEPRV+TVVEEEADL   E   SSE      FV+ FGE LR+F  Y ++LEESF +TS E+L LER  GRAIVDL+SC   +S ERRE A+ W RR+   G +  +FSE++ DDVR+LLRRY+EGWSM      T  ++   + G FL WK+QPVVWAS W+P
Sbjct:  187 WAAQLLMECARAVA-GRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEAAAAGAAAASSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPTAAPSAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHAGDLADLDLAALDLREGGATAALAVNCVNALR---GVARGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQSAERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATDDAAGAAAAGAFLAWKEQPVVWASAWKP 603          
BLAST of rna-XM_004509007.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q75I13|SHR2_ORYSJ (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR2 PE=1 SV=1)

HSP 1 Score: 431.024 bits (1107), Expect = 2.225e-144
Identity = 234/421 (55.58%), Postives = 291/421 (69.12%), Query Frame = 0
Query:  139 WAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEAL-----------------EGNP--KLHIIDISNTYCTQWPTLLEALATR-SDDTPHLRLTTVV-TAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIRED---EALAINCVNSLHSVSGAGNHRDALISLLRGLEPRVMTVVEEEADL---EYCFSSE------FVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSM------TQCSSDDNSNGIFLLWKDQPVVWASVWRP 520
            WA  +L+E ARA++   ++ R+QQLMWMLNEL+SPYGD DQK+ASYFLQ LF+R+  +G RT +TL+ ASD+  SFDSTR+  LKFQE+SPWT FGHVA NGAILE+                     P  +LHI+D+SNT+CTQWPTLLEALATR SDDTPHL +TTVV TA    + Q+VM+EIG R+EKFARLMGVPF F  V       +L+L+ LD+RE     ALA+NCVN+L    G    RDA ++ LR LEPRV+TVVEEEADL   E   SSE      FV+ FGE LR+F  Y ++LEESF +TS E+L LER  GRAIVDL+SC   +S ERRE A+ W RR+   G +  +FSE++ DDVR+LLRRY+EGWSM      T  ++   + G FL WK+QPVVWAS W+P
Sbjct:  187 WAAQLLMECARAVA-GRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEAAAAGAAASSSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPTAAPSAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHSGDLADLDLAALDLREGGATAALAVNCVNALR---GVARGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQSAERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATDDAAGAAAAGAFLAWKEQPVVWASAWKP 603          
BLAST of rna-XM_004509007.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9S7H5|SCL21_ARATH (Scarecrow-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=SCL21 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.937e-54
Identity = 120/386 (31.09%), Postives = 204/386 (52.85%), Query Frame = 0
Query:  143 ILLETARAISDNNNTNRIQQLMWMLNELS---SPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLH-----SVSGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREA-GRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWR 519
            +L+  A+A+S+NN    +    W + EL    S  G+  Q++ +Y L+ L +R+  +G   YK+L     +   F S   +L    EV P+  FG+++ NGAI EA++   ++HIID      +QW  L++A A R    P++R    +T V  GS+   +K+   R+EK A+   VPF+FN V        + +  LD+R+ EAL +N    LH     SVS   NHRD L+ +++ L P+V+T+VE+E +     +S F+  F E L ++   FE+++    R   E++ +E+    R +V++I+C+  E +ER E+  +W+ R    G      S  I   +RALLR Y  G+++     ++    ++L W D+ +V +  W+
Sbjct:   53 VLVACAKAVSENN----LLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKSLQSREPESYEFLSYVYVL---HEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWIALIQAFAARPGGAPNIR----ITGVGDGSVLVTVKK---RLEKLAKKFDVPFRFNAV--SRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVS-MENHRDRLLRMVKSLSPKVVTLVEQECNTN---TSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAI-----EERDGALYLGWMDRILVSSCAWK 413          
BLAST of rna-XM_004509007.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8H125|SCL5_ARATH (Scarecrow-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=SCL5 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.844e-51
Identity = 118/401 (29.43%), Postives = 204/401 (50.87%), Query Frame = 0
Query:  128 YFNFEILSGNSWAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQ----EVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLHSVSGAG----NHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREA-GRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWR 519
            Y + E++S       +L E A+A+ +N +      L+  L ++ S  G+  Q++ +Y L+ L +R+  +G   YK L       C  D T   LL +     E  P+  FG+ + NGAI EA++    +HIID   +   QW +L+ AL  R    P++R+T +    +  + Q  ++ +G R+ K A + GVPF+F+       E+ +   KL +R  EALA+N    LH +        NHRD L+ L++ L P V+T+VE+EA+     ++ F+  F E +  +   FE+++   +R   E++ +E+    R +V+LI+C+  E  ER E   +WR R H  G      S  +   ++ LL  Y E +++     ++    ++L WK+QP++ +  WR
Sbjct:  216 YRSMEMISRGDLK-GVLYECAKAV-ENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKALR------CK-DPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGAALCCTEVEIE--KLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTLVEQEANTN---TAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTL-----EERDGALYLGWKNQPLITSCAWR 597          
BLAST of rna-XM_004509007.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8GVE1|CIGR2_ORYSJ (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CIGR2 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 2.900e-50
Identity = 120/427 (28.10%), Postives = 216/427 (50.59%), Query Frame = 0
Query:   98 STITTPNTTFNNTINTPTTTDNYSFSPPQDYFNFEILSGNSWAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLH-----SVSGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREA-GRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVW 518
            + +  P++   N++   +  +  S  P +      I  GN     +L+  ARA+ +  N+  I  ++  L ++ S  G+  +++ +Y ++ L +R+  +G   YK L     K     S    L    E  P+  FG+++ NGAI EA++G  ++HIID   +   QW +LL+ALA R    P +R+T +  +V+  +    ++ +G R+   A L  VPF+F+ +   +    +  + L +   EALA+N    LH     SVS A NHRD L+ +++ L P+V+T+VE E++     ++ F + F E L ++   FE+++ +  R   E++ +E+    R IV+LI+C+  E  ER E   +W+ RL   G      S  +   +R LL+ Y + + + +         ++L WK +P+V +S W
Sbjct:  135 AVMLGPDSEIVNSLEN-SVANQLSLEPEKWVRMMGIPRGN--LKELLIACARAV-EEKNSFAIDMMIPELRKIVSVSGEPLERLGAYMVEGLVARLASSGISIYKALKCKEPKSSDLLSYMHFLY---EACPYFKFGYMSANGAIAEAVKGEDRIHIIDFHISQGAQWISLLQALAARPGGPPTVRITGIDDSVSAYARGGGLELVGRRLSHIASLCKVPFEFHPL--AISGSKVEAAHLGVIPGEALAVNFTLELHHIPDESVSTA-NHRDRLLRMVKSLSPKVLTLVEMESNTN---TAPFPQRFAETLDYYTAIFESIDLTLPRDDRERINMEQHCLAREIVNLIACEGEERAERYEPFGKWKARLTMAGFRPSPLSSLVNATIRTLLQSYSDNYKLAE-----RDGALYLGWKSRPLVVSSAW 543          
BLAST of rna-XM_004509007.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SN22|SCL32_ARATH (Scarecrow-like protein 32 OS=Arabidopsis thaliana OX=3702 GN=SCL32 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.105e-49
Identity = 123/396 (31.06%), Postives = 201/396 (50.76%), Query Frame = 0
Query:  143 ILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFA--SDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGS--IQKVMKEIGARMEKFARLMGVPFKFNVV---FCD-----LRELNLNLSKLDIREDEALAINCVNSLHSV------SGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWRP 520
            +LL  A AI D+N+     Q++W+LN ++ P GD+ Q++ S FL+AL SR          T+SF   +D++  F      L  F +++PW  FG +A N AIL A+EG   +HI+D+S T+C Q PTL++A+A+R +  P L   TVV++ +     I    +E+G+++  FA    +  +F +V   + D     L++L +  S      +EAL +NC   L  +      S + + R   +  LR L PR++T++EE+ DL    S   V        +F + F+  +   S    ++   E E    I ++++ +  E VER E   RW  R+       V   E+   DV+A+L  +  GW M +   +D+   + L WK   VV+A+VW P
Sbjct:   30 LLLHCATAI-DSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTLSSTISFLPQADELHRFSVVE--LAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFATTRNITMEFTIVPSTYSDGFSSLLQQLRIYPSSF----NEALVVNCHMMLRYIPEEPLTSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLT---SENLVNRLKSAFNYFWIPFDTTDTFMSE---QRRWYEAEISWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHAVGWGMKK---EDDDESLVLTWKGHSVVFATVWVP 409          
BLAST of rna-XM_004509007.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q4VYC8|NSP1_MEDTR (Protein NODULATION SIGNALING PATHWAY 1 OS=Medicago truncatula OX=3880 GN=NSP1 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.587e-46
Identity = 131/400 (32.75%), Postives = 206/400 (51.50%), Query Frame = 0
Query:  139 WAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRT-YKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPK----LHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMK---EIGARMEKFAR-LMGVPFKFNVVFCDLRELN------LNLSKLDIREDEALAINCVNSLHSVS-GAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSS--EFVEGFGECLRWFRVYFEALEESF-SRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWR 519
            WA  +L   A AI+   N NR+Q L+++L+EL+S  GD + ++A++ L+AL   ++ +   T   T++FAS +   F   +K LLKF E SPW +F +   N +IL+ L   P     LHI+DI  ++  QWPT LEAL+ R    P L   TVV A +     + M+    IG   + F+  L+G     NV    +++L+      LN   +D   DE L +     LH ++    + R   + +LRG+EP+   V+  E ++E C SS  +F  GF   + +   + ++   +F +R S E+ ++E EA +A+      +  E  ERRE   +W  R+   G     F E+  D  RALLR+Y   W M     ++NS  + L WK QPV + S+W+
Sbjct:  167 WAEQLLNPCAVAIT-GGNLNRVQHLLYVLHELASTTGDANHRLAAHGLRALTHHLSSSSSSTPSGTITFASTEPRFF---QKSLLKFYEFSPWFSFPNNIANASILQVLAEEPNNLRTLHILDIGVSHGVQWPTFLEALSRRPGGPPPLVRLTVVNASSSTENDQNMETPFSIGPCGDTFSSGLLGYAQSLNVNL-QIKKLDNHPLQTLNAKSVDTSSDETLIVCAQFRLHHLNHNNPDERSEFLKVLRGMEPK--GVILSENNMECCCSSCGDFATGFSRRVEYLWRFLDSTSSAFKNRDSDERKMMEGEAAKALT-----NQREMNERRE---KWCERMKEAGFAGEVFGEDAIDGGRALLRKYDNNWEM---KVEENSTSVELWWKSQPVSFCSLWK 548          
BLAST of rna-XM_004509007.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YS62|A0A1S2YS62_CICAR (Protein SHORT-ROOT-like OS=Cicer arietinum OX=3827 GN=LOC101506038 PE=3 SV=1)

HSP 1 Score: 1092.8 bits (2825), Expect = 0.000e+0
Identity = 520/520 (100.00%), Postives = 520/520 (100.00%), Query Frame = 0
Query:    1 MDTLFRLVNFQQHHHHHHHQPDPSLNSTTTLTTSSSSRSSTQTPPTTTYHYYQQQQQQEDEECFNYYYMDNNNNDEDLSSSSSKQQYYYPYQPQHHVSTITTPNTTFNNTINTPTTTDNYSFSPPQDYFNFEILSGNSWAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLHSVSGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWRP 520
            MDTLFRLVNFQQHHHHHHHQPDPSLNSTTTLTTSSSSRSSTQTPPTTTYHYYQQQQQQEDEECFNYYYMDNNNNDEDLSSSSSKQQYYYPYQPQHHVSTITTPNTTFNNTINTPTTTDNYSFSPPQDYFNFEILSGNSWAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLHSVSGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWRP
Sbjct:    1 MDTLFRLVNFQQHHHHHHHQPDPSLNSTTTLTTSSSSRSSTQTPPTTTYHYYQQQQQQEDEECFNYYYMDNNNNDEDLSSSSSKQQYYYPYQPQHHVSTITTPNTTFNNTINTPTTTDNYSFSPPQDYFNFEILSGNSWAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLHSVSGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWRP 520          
BLAST of rna-XM_004509007.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4XCM0|A0A9D4XCM0_PEA (Protein SHORT-ROOT OS=Pisum sativum OX=3888 GN=KIW84_042514 PE=3 SV=1)

HSP 1 Score: 816.224 bits (2107), Expect = 0.000e+0
Identity = 442/530 (83.40%), Postives = 475/530 (89.62%), Query Frame = 0
Query:    1 MDTLFRLVNFQQHHHHHHHQPDPSLNSTTTLTTSSSSRSSTQTPPTTTYHYYQQQQQQEDEECFN-YYYMDNNN-NDEDLSSSSSKQQYY-YPY-QPQHHVSTITT-----PNTTFNNTINTPTTTD-NYSFSPPQDYFNFEILSGNSWAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLHSVSGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWRP 520
            MDTLFRLVNFQQ  HH + QPDPSLNSTTTLTTSSSSRSS QT  TT YHYYQ Q+  EDEECFN +YYMD+NN NDEDLSSSSSKQ YY YPY QP HH  + TT     PNT FN TINTPTTTD NYSFSP QDYFNFE  SG+SW+ NILLETARAISDNN TNRIQQLMWMLNELSSPYGDTDQK+++YFLQALFSR+NDAGDRTYKTL+FAS+K CSFDSTRKMLLKFQEVSPWTTFGHVA NGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGS+QKVMKEIGARMEKFARLMGVPFKF ++F DLRELNL   +LDI+EDEALAINCVNSLHS+SGAGNHRD LI+ LRGLEPRVMTVVEEEADLE+CF S+FVEGFGECLRWFRVYFEALEESFSRTS E+L+LEREAGR IVDL++CDP+ESVERRE ASRWRRRL  GG +T SFS+E+CDDVRALLRRYREGWSMT CS+ D  +GIFL WKD+PVVWASVWRP
Sbjct:    1 MDTLFRLVNFQQQQHHQY-QPDPSLNSTTTLTTSSSSRSSRQTTTTTNYHYYQHQE--EDEECFNNFYYMDHNNTNDEDLSSSSSKQHYYNYPYDQPHHHHVSTTTITTSSPNTNFN-TINTPTTTDINYSFSPTQDYFNFEFSSGSSWSQNILLETARAISDNN-TNRIQQLMWMLNELSSPYGDTDQKLSAYFLQALFSRMNDAGDRTYKTLTFASEKTCSFDSTRKMLLKFQEVSPWTTFGHVASNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSVQKVMKEIGARMEKFARLMGVPFKFKIIFSDLRELNLR--ELDIKEDEALAINCVNSLHSISGAGNHRDGLINFLRGLEPRVMTVVEEEADLEHCFGSDFVEGFGECLRWFRVYFEALEESFSRTSCERLMLEREAGRGIVDLVACDPFESVERRETASRWRRRLQCGGFSTASFSDEVCDDVRALLRRYREGWSMTPCSAAD--DGIFLSWKDKPVVWASVWRP 521          
BLAST of rna-XM_004509007.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NNE7|A0A2Z6NNE7_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_183240 PE=3 SV=1)

HSP 1 Score: 790.801 bits (2041), Expect = 0.000e+0
Identity = 426/531 (80.23%), Postives = 462/531 (87.01%), Query Frame = 0
Query:    1 MDTLFRLVNFQQHHHHHHHQPDPSLNSTTTLTTSSSSRSSTQTPPTTTYHYYQQQQQQEDEECFN-YYYMD-NNNNDEDLSSSSSKQQYY--YPYQP--QHHVSTITTPNTTFNNTINTPTTTD-----NYSFSPPQDYFNFEILSGNSWAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLHSVSGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWRP 520
            MDTLFRLVNF   H    +QPDPS NSTTTLTTSSSSRSS QT PTT YHYYQQQQ+++ EECFN +YYMD NNNN+EDLSSSSSKQ YY  YPY     HHVS  T   TT  NT      T      NYS+SP QDYFNFE  S NSW+ NILLETARAISDNN TNRIQQLMWMLNELSSPYGD +QK++SYFLQALFSR+NDAGDRTYKTL+FAS+K CSFDSTRKMLLKFQEVSPWTTFGHVA NGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAV+GGS+QKV+KEIG+RMEKFARLMGVPFKF ++F DLRE  LNLS LDI+EDEALAINCVNSLHS+SGAGNHRD  ISLLRGLEPRVMTVVEEEAD E CF S+FVEGFGECLRWFRVYFEALEESFSRTS EKL+LEREAGR+IVDL++CD +ESVERRE A+RWRRRLHGGG NT+ FS+E+CDDVRALLRRYREGWSMTQCSS  + +GIFL WK++PVVWASVWRP
Sbjct:    1 MDTLFRLVNF---HQQPQYQPDPSFNSTTTLTTSSSSRSSRQTTPTT-YHYYQQQQEED-EECFNNFYYMDHNNNNEEDLSSSSSKQHYYNNYPYDQTHHHHVSPTTITTTTNTNTTFNTINTPTNTDINYSYSPSQDYFNFEFSSNNSWSQNILLETARAISDNN-TNRIQQLMWMLNELSSPYGDMEQKLSSYFLQALFSRMNDAGDRTYKTLTFASEKTCSFDSTRKMLLKFQEVSPWTTFGHVASNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVSGGSVQKVLKEIGSRMEKFARLMGVPFKFKIIFSDLRE--LNLSDLDIQEDEALAINCVNSLHSISGAGNHRDKFISLLRGLEPRVMTVVEEEADFEVCFGSDFVEGFGECLRWFRVYFEALEESFSRTSCEKLMLEREAGRSIVDLVACDAFESVERRETAARWRRRLHGGGFNTMPFSDEVCDDVRALLRRYREGWSMTQCSSSSSDDGIFLSWKEKPVVWASVWRP 523          
BLAST of rna-XM_004509007.3 vs. UniProtKB/TrEMBL
Match: tr|G7JE24|G7JE24_MEDTR (GRAS family transcription factor OS=Medicago truncatula OX=3880 GN=11409306 PE=3 SV=1)

HSP 1 Score: 778.474 bits (2009), Expect = 0.000e+0
Identity = 423/523 (80.88%), Postives = 457/523 (87.38%), Query Frame = 0
Query:    1 MDTLFRLVNFQQHHHHHHHQPDPSLNSTTTLTTSSSSRSSTQTPPTTTYHYYQQQQQQEDEECFN-YYYMD-NNNNDEDLSSSSSKQQYY-YPYQPQHHVSTITTPNTTFNNTINTPTTTDNYSFSPPQDYFNFEILSGNSWAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLHSVSGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWRP 520
            MDTLFRLVNFQQ    +  QPDPSLNSTTTLTTSSSSRSS      TTYHYY QQ+  EDEECFN +YYMD NNNNDEDLSSSSSKQ YY YPY     ++T  T   T    INTPTTTDNYSFSP  DYFNFE  SG+SW+ NILLETARA SDNN TNRIQQLMWMLNELS+PYGDTDQK++SYFLQALFSR+NDAGDRTYKTL+ AS+K CSFDSTRKMLLKFQEVSPWTTFGHVA NGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTA++GGS+QKVMKEIG+RMEKFARLMGVPFKF ++F DLRE  LNL  LDI+EDEALAINCVNSLHS+SGAGNHRD  ISLLRGLEPRV+T+VEEEADLE CF S+FVEGF ECLRWFRVYFEAL+ESFSRTS E+L+LEREAGR IVDL++CDPYESVERRE A+RWRRRLHGGG NTVSFS+E+CDDVRALLRRY+EGWSMT   S D   GIFL WKD+PVVWASVWRP
Sbjct:    1 MDTLFRLVNFQQQQQQY--QPDPSLNSTTTLTTSSSSRSSR----QTTYHYYNQQE--EDEECFNNFYYMDHNNNNDEDLSSSSSKQHYYTYPYASTTTITTPNTTYNT----INTPTTTDNYSFSPSHDYFNFE-FSGHSWSQNILLETARAFSDNN-TNRIQQLMWMLNELSTPYGDTDQKLSSYFLQALFSRMNDAGDRTYKTLTTASEKTCSFDSTRKMLLKFQEVSPWTTFGHVAANGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAISGGSVQKVMKEIGSRMEKFARLMGVPFKFKIIFSDLRE--LNLCDLDIKEDEALAINCVNSLHSISGAGNHRDLFISLLRGLEPRVLTIVEEEADLEVCFGSDFVEGFKECLRWFRVYFEALDESFSRTSSERLMLEREAGRGIVDLVACDPYESVERRETAARWRRRLHGGGFNTVSFSDEVCDDVRALLRRYKEGWSMT---SSDGDTGIFLSWKDKPVVWASVWRP 504          
BLAST of rna-XM_004509007.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8KUY0|A0A8B8KUY0_ABRPR (Protein SHORT-ROOT-like OS=Abrus precatorius OX=3816 GN=LOC113859058 PE=3 SV=1)

HSP 1 Score: 664.455 bits (1713), Expect = 0.000e+0
Identity = 367/524 (70.04%), Postives = 415/524 (79.20%), Query Frame = 0
Query:    1 MDTLFRLVNFQQHHHHHHHQPDPSLNSTTTLTTSSSSRSSTQTPPTTTYHYYQQQQQQEDEECFNYYYMDNNNNDEDLSSSSSKQQYYYPYQPQHHVSTITTPNTTFNNTINTPTTTDNYSFSP-PQDYFNFEILSGNSWAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVF--CDLRELNLNLSKLDIREDEALAINCVNSLHSVSGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSS-EFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWRP 520
            MDTLFRLVNFQQ       QPDPSLNSTT+ T+SSS  S         YHYY QQ   EDEECFN+Y MD    +EDLSSSSSK  +YY YQP  HVST            +TPTTT +YSFSP P   FNF      +W+ N+LLETARAI+DNN +NR+  L+WMLNELSSP+GDTDQK+A+YF QALFSR+ DAGDRTY+TL+ ASDK CSF+STRKM+LKFQEVSPWTTFGHVA NGAILEALEGN KLHI+DISNTYCTQWPTLLEALATR+D+TP LRLTTVVT   G S+Q+VMKEIG RMEKFARLMGVPFKFNVV    DL E  LNLS+LDI+EDEALA+NCVN+LHSVS  GN+RD LIS   GL+PR++TVVEEEADL+  F   EFV+GF ECLRWFRVYFEAL+ESF+RTS E+L+LER AGRAIVDL++C P ESVERRE A+RW  RLHGGGLN V FSEE+CDDVRALLRRY++GWSM QCS      GIFL WK+QPVVWAS WRP
Sbjct:    1 MDTLFRLVNFQQQQQQQ--QPDPSLNSTTSRTSSSSRSSRQN------YHYYSQQ---EDEECFNFY-MD----EEDLSSSSSK--HYYHYQPHPHVSTTFN------TNTSTPTTTTDYSFSPSPLPDFNFNFDFSTNWSHNVLLETARAIADNN-SNRVHHLLWMLNELSSPFGDTDQKLAAYFFQALFSRVTDAGDRTYRTLASASDKTCSFESTRKMVLKFQEVSPWTTFGHVASNGAILEALEGNSKLHIVDISNTYCTQWPTLLEALATRTDETPQLRLTTVVTGRPGNSLQRVMKEIGTRMEKFARLMGVPFKFNVVHHAGDLSE--LNLSQLDIKEDEALAVNCVNALHSVSAVGNNRDVLISSFHGLQPRIVTVVEEEADLDVGFEGYEFVKGFEECLRWFRVYFEALDESFARTSNERLMLERAAGRAIVDLVACSPAESVERRETATRWGMRLHGGGLNAVPFSEEVCDDVRALLRRYKDGWSMAQCS----DAGIFLSWKEQPVVWASAWRP 493          
BLAST of rna-XM_004509007.3 vs. UniProtKB/TrEMBL
Match: tr|A0A4P1RHZ2|A0A4P1RHZ2_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_27859 PE=3 SV=1)

HSP 1 Score: 661.374 bits (1705), Expect = 0.000e+0
Identity = 359/525 (68.38%), Postives = 416/525 (79.24%), Query Frame = 0
Query:    1 MDTLFRLVNFQQHHHHHHHQPDPSLNSTTTLTTSSSSRSST-QTPPTTTYHYYQQQQQQEDEECFNYYYMDNNNNDEDLSSSSSKQQYYYPYQPQHHVSTITTPNTTFNNTINTPTTTDNYSFSPPQDYFNFEILSGNSWAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSI---QKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLHSVSGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSS-EFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWRP 520
            MDTLFRLV+FQ  + H     + SLNSTT+ TT+SSS  S+ Q      YH+    QQ +DEECFN++ MD    DEDLSSSSSK  +YYPYQP HH  + TT  T          T DN+SFSP +  FNFE  SG  WA +ILLETARAI++NN+  R+QQLMWMLNELSSPYGDTDQK+ASYFLQALFSR+ +AGDRTY+TL+ AS++ CSF+STRK +LKFQEVSPWTTFGHVACNGAILEALEG PKLHIIDISNTYCTQWPTL EALATR+DDTP+LRLTTVVT   GGSI   Q+VMKEIG RMEKFARLMGVPFKFNV+        L+LS L+I++DEALAINCVN+LHS++G G+ RD LIS LR L+PR++TVVEEEADL+  F   EFV+GF ECLRWFRVYFEAL+ESF RTS E+L+LEREAGRA+ DL++C P ESVERRE A+RW +RLHGG LNTV FS+E+CDDVRALLRRY+EGWSMTQCS      GIFL WK+Q VVWAS WRP
Sbjct:    1 MDTLFRLVSFQ--YQHQQQTDNQSLNSTTSRTTTSSSSRSSRQQQHHQNYHF----QQDQDEECFNFF-MD----DEDLSSSSSK--HYYPYQPHHHPPSTTTTLTP---------TPDNFSFSPSRTDFNFE-FSGK-WANDILLETARAIAENNSA-RVQQLMWMLNELSSPYGDTDQKLASYFLQALFSRMTEAGDRTYRTLTSASERTCSFESTRKTVLKFQEVSPWTTFGHVACNGAILEALEGEPKLHIIDISNTYCTQWPTLFEALATRNDDTPYLRLTTVVTTRLGGSIAAVQRVMKEIGTRMEKFARLMGVPFKFNVIHHAGDLSTLDLSDLNIKDDEALAINCVNALHSITGVGDARDVLISSLRRLQPRIITVVEEEADLDVGFDGFEFVKGFQECLRWFRVYFEALDESFPRTSNERLMLEREAGRAVFDLVACSPSESVERRETAARWSQRLHGGALNTVPFSDEVCDDVRALLRRYKEGWSMTQCS----DAGIFLSWKEQVVVWASTWRP 496          
BLAST of rna-XM_004509007.3 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5LKL2|A0A6A5LKL2_LUPAL (Putative transcription factor GRAS family OS=Lupinus albus OX=3870 GN=Lal_00026167 PE=3 SV=1)

HSP 1 Score: 644.04 bits (1660), Expect = 0.000e+0
Identity = 359/525 (68.38%), Postives = 417/525 (79.43%), Query Frame = 0
Query:    1 MDTLFRLVNFQQHHHHHHHQPD-PSLNSTTTLTTSSSSRSSTQTPPTTTYHYYQQQQQQEDEECFNYYYMDNNNNDEDLSSSSSKQQYYYPYQPQHHVSTITTPNTTFNNTINTPTTTDNYSFSPPQDYFNFEILSGNSWAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSI---QKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLHSVSGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSS-EFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWRP 520
            MDTLFRLV+FQQH      Q D  SLNSTT+ TT+SSS  S++      YH+    QQ +DEECFN++ MD    DEDLSSSSSK  +YYPYQP H  ST TT  TT      T  T DN+SFSP ++ FNFE  SG  WA +ILLETARAI++ N+  R+QQLMWMLNELSSPYGDTDQK+ASYFLQALFSR+N+AGDRTY++L+ AS+K CSF+STRK +LKFQEVSPWTTFGHVACNGAILEALEG PKLHI+DISNTYCTQWPTL EALATR+DDTP+LRLTTVVT   GGSI   QKVMKEIG RMEKFARLMGVPFKFNV+        L+ S LDI++DEALAINCVN+LHS++G GN R+  IS LR L+P+++TVVEEEADL+  F   EFV+GF ECLRWFRVYFEAL+ESF RTS E+L+LER AGRA+V+L++C P +SVERRE A+RW +RLHGGGLNT  FS+E+CDDVRALLRRY+EGWSMT CS      GIFL WK+Q VVWAS WRP
Sbjct:    1 MDTLFRLVSFQQHQQQQQLQADNQSLNSTTSRTTTSSSSRSSRQ--QQNYHF----QQDQDEECFNFF-MD----DEDLSSSSSK--HYYPYQPHHPPSTTTTTTTT----TTTTPTPDNFSFSPSRNDFNFE-FSGK-WAHDILLETARAIAEKNSA-RVQQLMWMLNELSSPYGDTDQKLASYFLQALFSRMNEAGDRTYRSLTSASEKTCSFESTRKTVLKFQEVSPWTTFGHVACNGAILEALEGEPKLHIVDISNTYCTQWPTLFEALATRNDDTPYLRLTTVVTTRPGGSIVAVQKVMKEIGTRMEKFARLMGVPFKFNVIHHAGDLSTLDFSDLDIKDDEALAINCVNALHSITGIGNARELFISSLRRLQPKIITVVEEEADLDVGFDGFEFVKGFQECLRWFRVYFEALDESFPRTSNERLMLERAAGRAVVELVACSPADSVERRETAARWSQRLHGGGLNTAPFSDEVCDDVRALLRRYKEGWSMTPCS----DAGIFLSWKEQAVVWASAWRP 501          
BLAST of rna-XM_004509007.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3R550|A0A0S3R550_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G359200 PE=3 SV=1)

HSP 1 Score: 642.114 bits (1655), Expect = 0.000e+0
Identity = 358/523 (68.45%), Postives = 414/523 (79.16%), Query Frame = 0
Query:    1 MDTLFRLVNFQQHHHHHHHQPDPSLNSTTTLTTSSSSRSSTQTPPTTTYHYYQQQQQQEDEECFNYYYMDNNNNDEDLSSSSSKQQYYYPYQPQHHVSTITTPNTTFNNTINTPTTTDNYSFSP--PQDYFNFEILSGNSWAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLHSVSGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSS-EFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWRP 520
            MDTLFRLV+FQQ  HHH  QPDPSLNSTT+ T+SSS  S         YHY      QEDEECFN+Y MD    +EDLSSSSS+  +YYPY   H+VST TT  TT N    T  T  +YSFSP  P   FNF+     +W+ N+LLETARA +DNN+T R+ QL+WMLNELSSPYGDTDQK+A+YFLQALFSR+ DAGDRTY+TL+ ASDK CSF+STRK +LKFQEVSPWTTFGHVA NGAILEALEGNPKLHI+DISNTYCTQWPTLLEALATR+D+TPHLRLTTVVT   G S+Q+VMKEIG RMEKFARLMGVPFKFNVV       +LN S+L++++DEALAINCVN+LHSVS AGN RDA IS L+GL+PR++TVVEEEADL+      EFV GF ECLRWFRVYFEAL+ESF++T  E+L+LER AGRA+VDL++C P +S+ERRE A+RW  RLHGGGL+ V FSEE+CDDVRALLRRY+EGWSM  CS      GIFL WK+ PVVWAS WRP
Sbjct:    1 MDTLFRLVSFQQQQHHHQPQPDPSLNSTTSRTSSSSRSSRQNY-----YHY----SHQEDEECFNFY-MD----EEDLSSSSSR--HYYPY---HNVSTTTTTTTTANTFSTTANTDYSYSFSPTPPLPDFNFQF--SPNWSHNLLLETARAFADNNST-RLHQLLWMLNELSSPYGDTDQKLAAYFLQALFSRVTDAGDRTYRTLASASDKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALEGNPKLHILDISNTYCTQWPTLLEALATRTDETPHLRLTTVVTGRTGNSVQRVMKEIGTRMEKFARLMGVPFKFNVVHHAGDLSDLNFSQLNLKDDEALAINCVNALHSVSPAGNGRDAFISSLQGLQPRIVTVVEEEADLDVGIEGYEFVRGFEECLRWFRVYFEALDESFAKTCNERLMLERAAGRAVVDLVACSPADSLERRETAARWGTRLHGGGLSAVPFSEEVCDDVRALLRRYKEGWSMVPCS----DTGIFLSWKETPVVWASAWRP 497          
BLAST of rna-XM_004509007.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445HX99|A0A445HX99_GLYSO (Protein SHORT-ROOT OS=Glycine soja OX=3848 GN=D0Y65_028995 PE=3 SV=1)

HSP 1 Score: 642.114 bits (1655), Expect = 0.000e+0
Identity = 346/523 (66.16%), Postives = 399/523 (76.29%), Query Frame = 0
Query:    3 TLFRLVN-FQQHHHHHHHQPDPSLNSTTTLTTSSSSRSSTQTPPTTTYHYYQQQQQQEDEECFNYYYMDNNNNDEDLSSSSSKQQYYYPYQPQHHVSTITTPNTTFNNTINTPTTTDNYSFSPPQDY---FNFEILSGNSWAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLHSVSGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSS-EFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLH-GGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWR 519
            TLFR+V+ FQ H     HQ   SLN++TT ++S SSR     P            Q+ DEECFN++ MD    DEDLSSSSSK  +YYPYQP                    P +T ++SFSP       F FE  SG  WA +ILLETARA++D N T R+QQLMWMLNELSSPYGDTDQK+ASYFLQA FSRI  AGDRTYKTL+ AS+K CSF+STRK +LKFQE+SPWTTFGHVA NGAILEALEG PKLHI+DISNTYCTQWPTL EALATR+DDTPHLRLT+VVTA  G + QKVMKEIGARMEKFARLMGVPFKFNVV    +  +L+ S LDI+EDEALAINCVN+LHS++  GNHRDA+IS LR L+PR++TVVEEEADL+      EFV+GF ECLRWFRVYFEAL+ESF RTS E+L+LER AGRA+VDL++C P +SVERRE A+RW RR+H GGG NTV+FSEE+CDDVRALLRRYREGW+MTQCS      GIFL WK+QPVVWAS WR
Sbjct:    4 TLFRVVSSFQHHQADQDHQ---SLNNSTTSSSSRSSRQEQNYP----------YPQEHDEECFNFF-MD----DEDLSSSSSK--HYYPYQPH-------------------PPSTTDHSFSPTPGVDVVFPFEFSSGK-WAQDILLETARAVADKNTT-RLQQLMWMLNELSSPYGDTDQKLASYFLQAFFSRITQAGDRTYKTLASASEKTCSFESTRKTVLKFQELSPWTTFGHVASNGAILEALEGEPKLHIVDISNTYCTQWPTLFEALATRNDDTPHLRLTSVVTA--GATAQKVMKEIGARMEKFARLMGVPFKFNVVHHVGQLSDLDFSVLDIKEDEALAINCVNTLHSIAAVGNHRDAVISSLRRLKPRIVTVVEEEADLDIGLEGFEFVKGFEECLRWFRVYFEALDESFPRTSNERLMLERAAGRAVVDLVACSPADSVERREKAARWARRMHGGGGFNTVAFSEEVCDDVRALLRRYREGWAMTQCS----DAGIFLTWKEQPVVWASAWR 479          
BLAST of rna-XM_004509007.3 vs. UniProtKB/TrEMBL
Match: tr|I1LH59|I1LH59_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100797072 PE=3 SV=2)

HSP 1 Score: 642.114 bits (1655), Expect = 0.000e+0
Identity = 346/523 (66.16%), Postives = 399/523 (76.29%), Query Frame = 0
Query:    3 TLFRLVN-FQQHHHHHHHQPDPSLNSTTTLTTSSSSRSSTQTPPTTTYHYYQQQQQQEDEECFNYYYMDNNNNDEDLSSSSSKQQYYYPYQPQHHVSTITTPNTTFNNTINTPTTTDNYSFSPPQDY---FNFEILSGNSWAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVMKEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCVNSLHSVSGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSS-EFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLH-GGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWR 519
            TLFR+V+ FQ H     HQ   SLN++TT ++S SSR     P            Q+ DEECFN++ MD    DEDLSSSSSK  +YYPYQP                    P +T ++SFSP       F FE  SG  WA +ILLETARA++D N T R+QQLMWMLNELSSPYGDTDQK+ASYFLQA FSRI  AGDRTYKTL+ AS+K CSF+STRK +LKFQE+SPWTTFGHVA NGAILEALEG PKLHI+DISNTYCTQWPTL EALATR+DDTPHLRLT+VVTA  G + QKVMKEIGARMEKFARLMGVPFKFNVV    +  +L+ S LDI+EDEALAINCVN+LHS++  GNHRDA+IS LR L+PR++TVVEEEADL+      EFV+GF ECLRWFRVYFEAL+ESF RTS E+L+LER AGRA+VDL++C P +SVERRE A+RW RR+H GGG NTV+FSEE+CDDVRALLRRYREGW+MTQCS      GIFL WK+QPVVWAS WR
Sbjct:    4 TLFRVVSSFQHHQADQDHQ---SLNNSTTSSSSRSSRQEQNYP----------YPQEHDEECFNFF-MD----DEDLSSSSSK--HYYPYQPH-------------------PPSTTDHSFSPTPGVDVVFPFEFSSGK-WAQDILLETARAVADKNTT-RLQQLMWMLNELSSPYGDTDQKLASYFLQAFFSRITQAGDRTYKTLASASEKTCSFESTRKTVLKFQELSPWTTFGHVASNGAILEALEGEPKLHIVDISNTYCTQWPTLFEALATRNDDTPHLRLTSVVTA--GATAQKVMKEIGARMEKFARLMGVPFKFNVVHHVGQLSDLDFSVLDIKEDEALAINCVNTLHSIAAVGNHRDAVISSLRRLKPRIVTVVEEEADLDIGLEGFEFVKGFEECLRWFRVYFEALDESFPRTSNERLMLERAAGRAVVDLVACSPADSVERREKAARWARRMHGGGGFNTVAFSEEVCDDVRALLRRYREGWAMTQCS----DAGIFLTWKEQPVVWASAWR 479          
The following BLAST results are available for this feature:
BLAST of rna-XM_004509007.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|0.000e+054.55Symbols: SHR, SGR7, EAL1 | SHOOT GRAVITROPISM 7, E... [more]
|6.165e-5531.09Symbols: SCL21 | SCARECROW-like 21 | chr2:1720575-... [more]
|9.831e-5329.43Symbols: SCL5 | scarecrow-like 5 | chr1:18737398-1... [more]
|1.900e-5229.43Symbols: SCL5 | scarecrow-like 5 | chr1:18737398-1... [more]
|2.852e-5229.43Symbols: SCL5 | scarecrow-like 5 | chr1:18737398-1... [more]
|1.146e-5031.06Symbols: no symbol available | no full name availa... [more]
|3.789e-4727.72Symbols: PAT1 | phytochrome a signal transduction ... [more]
|3.789e-4727.72Symbols: PAT1 | phytochrome a signal transduction ... [more]
|3.789e-4727.72Symbols: PAT1 | phytochrome a signal transduction ... [more]
|3.789e-4727.72Symbols: PAT1 | phytochrome a signal transduction ... [more]
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BLAST of rna-XM_004509007.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q9SZF7|SHR_ARATH0.000e+054.55Protein SHORT-ROOT OS=Arabidopsis thaliana OX=3702... [more]
sp|A2YN56|SHR1_ORYSI3.963e-15146.92Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica... [more]
sp|Q8H2X8|SHR1_ORYSJ1.648e-14946.75Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japoni... [more]
sp|A2XIA8|SHR2_ORYSI1.367e-14455.58Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica... [more]
sp|Q75I13|SHR2_ORYSJ2.225e-14455.58Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japoni... [more]
sp|Q9S7H5|SCL21_ARATH5.937e-5431.09Scarecrow-like protein 21 OS=Arabidopsis thaliana ... [more]
sp|Q8H125|SCL5_ARATH1.844e-5129.43Scarecrow-like protein 5 OS=Arabidopsis thaliana O... [more]
sp|Q8GVE1|CIGR2_ORYSJ2.900e-5028.10Chitin-inducible gibberellin-responsive protein 2 ... [more]
sp|Q9SN22|SCL32_ARATH1.105e-4931.06Scarecrow-like protein 32 OS=Arabidopsis thaliana ... [more]
sp|Q4VYC8|NSP1_MEDTR1.587e-4632.75Protein NODULATION SIGNALING PATHWAY 1 OS=Medicago... [more]
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BLAST of rna-XM_004509007.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2YS62|A0A1S2YS62_CICAR0.000e+0100.00Protein SHORT-ROOT-like OS=Cicer arietinum OX=3827... [more]
tr|A0A9D4XCM0|A0A9D4XCM0_PEA0.000e+083.40Protein SHORT-ROOT OS=Pisum sativum OX=3888 GN=KIW... [more]
tr|A0A2Z6NNE7|A0A2Z6NNE7_TRISU0.000e+080.23Uncharacterized protein OS=Trifolium subterraneum ... [more]
tr|G7JE24|G7JE24_MEDTR0.000e+080.88GRAS family transcription factor OS=Medicago trunc... [more]
tr|A0A8B8KUY0|A0A8B8KUY0_ABRPR0.000e+070.04Protein SHORT-ROOT-like OS=Abrus precatorius OX=38... [more]
tr|A0A4P1RHZ2|A0A4P1RHZ2_LUPAN0.000e+068.38Uncharacterized protein OS=Lupinus angustifolius O... [more]
tr|A0A6A5LKL2|A0A6A5LKL2_LUPAL0.000e+068.38Putative transcription factor GRAS family OS=Lupin... [more]
tr|A0A0S3R550|A0A0S3R550_PHAAN0.000e+068.45Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A445HX99|A0A445HX99_GLYSO0.000e+066.16Protein SHORT-ROOT OS=Glycine soja OX=3848 GN=D0Y6... [more]
tr|I1LH59|I1LH59_SOYBN0.000e+066.16Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005202Transcription factor GRASPFAMPF03514GRAScoord: 142..519
e-value: 3.2E-97
score: 337.4
IPR005202Transcription factor GRASPANTHERPTHR31636OSJNBA0084A10.13 PROTEIN-RELATEDcoord: 85..518
IPR005202Transcription factor GRASPROSITEPS50985GRAScoord: 131..519
score: 73.400879

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_004509007.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004509007.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004509007.3; organism=Cicer arietinum; type=mRNA; length=1563bp
ATGGATACATTGTTTAGGCTAGTCAATTTTCAACAACACCATCATCATCA
TCATCATCAACCCGATCCTTCCCTCAACTCCACCACCACCTTAACAACAT
CAAGCAGCTCTAGATCCTCAACACAAACACCACCAACAACAACGTATCAT
TATTATCAACAACAACAACAACAAGAAGACGAAGAATGCTTCAATTATTA
TTACATGGATAACAATAATAATGATGAAGATTTATCCTCATCTTCTTCTA
AACAACAATACTACTATCCTTATCAACCTCAACACCATGTATCCACTATC
ACAACTCCAAACACCACCTTTAATAATACTATTAACACCCCCACCACCAC
CGATAATTACTCTTTCTCACCTCCCCAAGACTACTTCAACTTTGAAATAC
TCTCCGGCAACTCATGGGCACCAAACATCCTCCTCGAAACCGCACGTGCG
ATTTCTGACAACAACAACACAAATCGAATCCAACAACTCATGTGGATGTT
AAACGAACTTAGTTCCCCTTACGGTGACACAGATCAAAAAATAGCATCAT
ATTTTCTTCAAGCTTTATTTAGTCGCATAAATGATGCAGGTGATAGAACC
TACAAAACCTTATCTTTTGCTTCGGACAAAATATGTTCATTCGATTCAAC
GAGGAAGATGTTGTTGAAGTTCCAAGAAGTTAGTCCATGGACAACGTTTG
GACACGTGGCATGCAACGGTGCTATCTTAGAAGCACTAGAAGGTAACCCT
AAACTTCACATAATTGACATTAGCAACACTTATTGCACTCAATGGCCAAC
ACTTCTAGAAGCACTCGCCACTCGCTCCGACGATACACCGCATCTCCGTT
TAACCACTGTTGTCACCGCCGTCAACGGTGGTTCCATACAAAAAGTCATG
AAGGAAATCGGTGCTAGGATGGAAAAATTCGCGAGACTCATGGGAGTACC
ATTCAAATTCAACGTTGTTTTTTGTGATCTAAGGGAATTAAATTTAAATT
TATCTAAGTTAGATATAAGAGAAGATGAAGCTTTGGCTATTAATTGTGTG
AATTCTTTACATTCGGTTTCAGGCGCCGGAAACCACCGTGACGCTTTGAT
ATCTTTGTTACGTGGGTTGGAGCCTAGGGTTATGACGGTGGTTGAAGAGG
AAGCTGATTTGGAATATTGTTTTAGTTCGGAATTTGTGGAAGGTTTTGGA
GAGTGTTTGAGATGGTTTAGGGTTTATTTTGAAGCACTTGAGGAGAGTTT
TTCGAGAACGAGCGGAGAGAAGTTGATATTGGAAAGAGAAGCTGGAAGAG
CGATTGTTGATTTGATTTCTTGTGATCCTTATGAGTCGGTGGAGAGGCGG
GAAATGGCGTCGAGGTGGAGGAGGCGTTTGCATGGTGGAGGGTTGAATAC
GGTGTCGTTTAGTGAAGAGATTTGTGATGATGTTAGGGCTTTGTTGAGGA
GGTATAGGGAAGGGTGGTCAATGACACAGTGCTCCTCCGATGATAATAGT
AACGGAATATTCTTGTTGTGGAAGGATCAGCCGGTTGTGTGGGCCAGTGT
ATGGAGGCCTTGA
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protein sequence of rna-XM_004509007.3_CaCDCfrontier-NCBI_v1

>rna-XM_004509007.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004509007.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004509007.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=520bp
MDTLFRLVNFQQHHHHHHHQPDPSLNSTTTLTTSSSSRSSTQTPPTTTYH
YYQQQQQQEDEECFNYYYMDNNNNDEDLSSSSSKQQYYYPYQPQHHVSTI
TTPNTTFNNTINTPTTTDNYSFSPPQDYFNFEILSGNSWAPNILLETARA
ISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRT
YKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGNP
KLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVNGGSIQKVM
KEIGARMEKFARLMGVPFKFNVVFCDLRELNLNLSKLDIREDEALAINCV
NSLHSVSGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFG
ECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERR
EMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNS
NGIFLLWKDQPVVWASVWRP
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mRNA from alignment at chr7:11428681..11430683-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_004509007.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004509007.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004509007.3; organism=Cicer arietinum; type=mRNA; length=2003bp; location=Sequence derived from: chr7:11428681..11430683- (Cicer arietinum
GAAGGTACAATACCCCAACTTCCCACAGTTAAAAACGCGTTACTAGGGCC ATTGCTTGTTCTAAGAAGCAACTATTGCTTTGTTAGTTTATGTATCTATT TGGTTAAATGGATACATTGTTTAGGCTAGTCAATTTTCAACAACACCATC ATCATCATCATCATCAACCCGATCCTTCCCTCAACTCCACCACCACCTTA ACAACATCAAGCAGCTCTAGATCCTCAACACAAACACCACCAACAACAAC GTATCATTATTATCAACAACAACAACAACAAGAAGACGAAGAATGCTTCA ATTATTATTACATGGATAACAATAATAATGATGAAGATTTATCCTCATCT TCTTCTAAACAACAATACTACTATCCTTATCAACCTCAACACCATGTATC CACTATCACAACTCCAAACACCACCTTTAATAATACTATTAACACCCCCA CCACCACCGATAATTACTCTTTCTCACCTCCCCAAGACTACTTCAACTTT GAAATACTCTCCGGCAACTCATGGGCACCAAACATCCTCCTCGAAACCGC ACGTGCGATTTCTGACAACAACAACACAAATCGAATCCAACAACTCATGT GGATGTTAAACGAACTTAGTTCCCCTTACGGTGACACAGATCAAAAAATA GCATCATATTTTCTTCAAGCTTTATTTAGTCGCATAAATGATGCAGGTGA TAGAACCTACAAAACCTTATCTTTTGCTTCGGACAAAATATGTTCATTCG ATTCAACGAGGAAGATGTTGTTGAAGTTCCAAGAAGTTAGTCCATGGACA ACGTTTGGACACGTGGCATGCAACGGTGCTATCTTAGAAGCACTAGAAGG TAACCCTAAACTTCACATAATTGACATTAGCAACACTTATTGCACTCAAT GGCCAACACTTCTAGAAGCACTCGCCACTCGCTCCGACGATACACCGCAT CTCCGTTTAACCACTGTTGTCACCGCCGTCAACGGTGGTTCCATACAAAA AGTCATGAAGGAAATCGGTGCTAGGATGGAAAAATTCGCGAGACTCATGG GAGTACCATTCAAATTCAACGTTGTTTTTTGTGATCTAAGGGAATTAAAT TTAAATTTATCTAAGTTAGATATAAGAGAAGATGAAGCTTTGGCTATTAA TTGTGTGAATTCTTTACATTCGGTTTCAGGCGCCGGAAACCACCGTGACG CTTTGATATCTTTGTTACGTGGGTTGGAGCCTAGGGTTATGACGGTGGTT GAAGAGGAAGCTGATTTGGAATATTGTTTTAGTTCGGAATTTGTGGAAGG TTTTGGAGAGTGTTTGAGATGGTTTAGGGTTTATTTTGAAGCACTTGAGG AGAGTTTTTCGAGAACGAGCGGAGAGAAGTTGATATTGGAAAGAGAAGCT GGAAGAGCGATTGTTGATTTGATTTCTTGTGATCCTTATGAGTCGGTGGA GAGGCGGGAAATGGCGTCGAGGTGGAGGAGGCGTTTGCATGGTGGAGGGT TGAATACGGTGTCGTTTAGTGAAGAGATTTGTGATGATGTTAGGGCTTTG TTGAGGAGGTATAGGGAAGGGTGGTCAATGACACAGTGCTCCTCCGATGA TAATAGTAACGGAATATTCTTGTTGTGGAAGGATCAGCCGGTTGTGTGGG CCAGTGTATGGAGGCCTTGACGTATAAATTATGGTTTTAAATTGCAACTG TATTATGGATTTTGAAGTTTTCTCAACAATATCATAATTATGACTTAGGG TTGATTGGCTGCATCTTCCATCGCATGTGTTCTTAGTTTTTTTGGCACCT GCGTTTGGGATTGGTTGAAGTTTTTAGTAATGGGTTCCATAATTGCTTTT TCTTTTATTATAAAATATATAAGTTTGGTAATTTATTAGGCAAGCATAAG AAAGAGGATATTCATTAAAGAGTTTGCTTGTGTATTTAAAAGGAACGAAG TAAATTATTTTTTTGTTACCATTTTATGATTGATTTATTTTTATTATTAT TTA
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Coding sequence (CDS) from alignment at chr7:11428681..11430683-

>rna-XM_004509007.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004509007.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004509007.3; organism=Cicer arietinum; type=CDS; length=1563bp; location=Sequence derived from: chr7:11428681..11430683- (Cicer arietinum
ATGGATACATTGTTTAGGCTAGTCAATTTTCAACAACACCATCATCATCA
TCATCATCAACCCGATCCTTCCCTCAACTCCACCACCACCTTAACAACAT
CAAGCAGCTCTAGATCCTCAACACAAACACCACCAACAACAACGTATCAT
TATTATCAACAACAACAACAACAAGAAGACGAAGAATGCTTCAATTATTA
TTACATGGATAACAATAATAATGATGAAGATTTATCCTCATCTTCTTCTA
AACAACAATACTACTATCCTTATCAACCTCAACACCATGTATCCACTATC
ACAACTCCAAACACCACCTTTAATAATACTATTAACACCCCCACCACCAC
CGATAATTACTCTTTCTCACCTCCCCAAGACTACTTCAACTTTGAAATAC
TCTCCGGCAACTCATGGGCACCAAACATCCTCCTCGAAACCGCACGTGCG
ATTTCTGACAACAACAACACAAATCGAATCCAACAACTCATGTGGATGTT
AAACGAACTTAGTTCCCCTTACGGTGACACAGATCAAAAAATAGCATCAT
ATTTTCTTCAAGCTTTATTTAGTCGCATAAATGATGCAGGTGATAGAACC
TACAAAACCTTATCTTTTGCTTCGGACAAAATATGTTCATTCGATTCAAC
GAGGAAGATGTTGTTGAAGTTCCAAGAAGTTAGTCCATGGACAACGTTTG
GACACGTGGCATGCAACGGTGCTATCTTAGAAGCACTAGAAGGTAACCCT
AAACTTCACATAATTGACATTAGCAACACTTATTGCACTCAATGGCCAAC
ACTTCTAGAAGCACTCGCCACTCGCTCCGACGATACACCGCATCTCCGTT
TAACCACTGTTGTCACCGCCGTCAACGGTGGTTCCATACAAAAAGTCATG
AAGGAAATCGGTGCTAGGATGGAAAAATTCGCGAGACTCATGGGAGTACC
ATTCAAATTCAACGTTGTTTTTTGTGATCTAAGGGAATTAAATTTAAATT
TATCTAAGTTAGATATAAGAGAAGATGAAGCTTTGGCTATTAATTGTGTG
AATTCTTTACATTCGGTTTCAGGCGCCGGAAACCACCGTGACGCTTTGAT
ATCTTTGTTACGTGGGTTGGAGCCTAGGGTTATGACGGTGGTTGAAGAGG
AAGCTGATTTGGAATATTGTTTTAGTTCGGAATTTGTGGAAGGTTTTGGA
GAGTGTTTGAGATGGTTTAGGGTTTATTTTGAAGCACTTGAGGAGAGTTT
TTCGAGAACGAGCGGAGAGAAGTTGATATTGGAAAGAGAAGCTGGAAGAG
CGATTGTTGATTTGATTTCTTGTGATCCTTATGAGTCGGTGGAGAGGCGG
GAAATGGCGTCGAGGTGGAGGAGGCGTTTGCATGGTGGAGGGTTGAATAC
GGTGTCGTTTAGTGAAGAGATTTGTGATGATGTTAGGGCTTTGTTGAGGA
GGTATAGGGAAGGGTGGTCAATGACACAGTGCTCCTCCGATGATAATAGT
AACGGAATATTCTTGTTGTGGAAGGATCAGCCGGTTGTGTGGGCCAGTGT
ATGGAGGCCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR005202TF_GRAS