rna-XM_004509017.3
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Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_004509017.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:18522570-18523802 FORWARD LENGTH=410) HSP 1 Score: 490.73 bits (1262), Expect = 6.464e-171 Identity = 246/445 (55.28%), Postives = 315/445 (70.79%), Query Frame = 0
Query: 115 FPTSKALTNFGDTNCMEQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRA-AKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASR-HEVSPLIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKE--DEHIVLTWKGHNVVFASAWLP 555
FP+ K L GD N MEQLL+HCA AI++ND L QILWVLNNIAPPDGDS QRL ++FLRAL +RA +K T + + L HRFS++ELA FVDLTPWHRFGF AANA+I+ A EG+S +HIVDLS THCMQIPTLIDA+ASR ++ PL+KLTV ++ H PP +++SYEELGSKLVNFA +RN+T+EF +V S+Y++GF+SL++ LR+ ++ EALV+NCHMML YIP+E L T++++SLR++FLK +R L+P +V L++EDVDLTS NLV RL+SAFNY WIP+DT DTF+ S+QR+WYEA I WKIENV+A EG +RVER E +W +RMR A F G+ E+ V +VKAML+EHA GWG+KKE DE +VLTWKGH+VVFA+ W+P
Sbjct: 12 FPSPKPLRGCGDANFMEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTLSSTISFLPQADEL----HRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSD------HFPPFINISYEELGSKLVNFATTRNITMEFTIVPSTYSDGFSSLLQQLRIYPSSFN-EALVVNCHMMLRYIPEEPL---------------------------------TSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTDTFM---SEQRRWYEAEISWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHAVGWGMKKEDDDESLVLTWKGHSVVFATVWVP 409
BLAST of rna-XM_004509017.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:26898401-26899097 REVERSE LENGTH=202) HSP 1 Score: 231.876 bits (590), Expect = 6.647e-73 Identity = 128/240 (53.33%), Postives = 162/240 (67.50%), Query Frame = 0
Query: 255 MQIPTLIDAIASR--HEVSPLIKLTV-ADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDE 491
MQIPTLID++A++ + PL+KLTV A A FH PP+L +SYEELGSKLVNFA +RNV +EFR++SSSY++G +SLIE LR+ V+ EALV+NCHMMLHYIPDE L T++LRS+FLK +R L+PT+V L+DED D TS N + RLRS +NY+WIPYDT + FL RGS+QRQWYEA+I WKI+NV+A EG +RVER E
Sbjct: 1 MQIPTLIDSMANKLHKKPPPLLKLTVIASDAE-----FHPPPLLGISYEELGSKLVNFATTRNVAMEFRIISSSYSDGLSSLIEQLRIDPFVF-NEALVVNCHMMLHYIPDEIL------------------------------------TSNLRSVFLKELRDLNPTIVTLIDEDSDFTSTNFISRLRSLYNYMWIPYDTAEMFLTRGSEQRQWYEADISWKIDNVVAKEGAERVERLE 198
BLAST of rna-XM_004509017.3 vs. Araport11
Match: | (Symbols: SHR, SGR7, EAL1 | SHOOT GRAVITROPISM 7, ENDODERMAL-AMYLOPLAST LESS 1, SHORT ROOT | chr4:17691871-17693466 FORWARD LENGTH=531) HSP 1 Score: 184.111 bits (466), Expect = 3.848e-51 Identity = 128/440 (29.09%), Postives = 207/440 (47.05%), Query Frame = 0
Query: 131 EQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGT-C-KMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHANI---DQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTS-------NNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAG-WGLKK--EDEHIVLTWKGHNVVFASAWLP 555
+ +L+ A A D AQQILW LN ++ P GD+ Q+LA+ FL+AL NR +G C + +V + + E+ R ++++ F +++PW FG AAN +I+EA +G + IHIVD+SST C Q PTL++A+A+R + +P ++LT AN DQ H +E+G+++ FAR V +F ++ + L E + V E L INC +H I A+ S R + + R L P +V +V+E+ DL + + + + +++ + PR S +R E I +++A E ER E KW +RMRN+ F +G+ +E +V+A+L + G W + + + I L W+ VV+ASAW P
Sbjct: 144 DSVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLK---FQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASH------RMMKEIGNRMEKFARLMGVPFKFNII-----HHVGDLSEFDLNELDVKPDEVLAINCVGAMHGI---------------------------------------ASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRYKEGVWSMVQCPDAAGIFLCWRDQPVVWASAWRP 530
BLAST of rna-XM_004509017.3 vs. Araport11
Match: | (Symbols: PAT1 | phytochrome a signal transduction 1 | chr5:19522497-19524053 REVERSE LENGTH=490) HSP 1 Score: 139.043 bits (349), Expect = 3.021e-35 Identity = 110/422 (26.07%), Postives = 183/422 (43.36%), Query Frame = 0
Query: 134 LVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRL-VYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAN-ICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAW 553
LV CA A+ ND+ +A ++ L + G+ QRL L L + A +G+ + A N + + ++ P+ +FG+ +AN +I EA + + +HI+D Q TLI A A+R P I++T ID + LS +G++L A+ NV EF N + + ++ + L V GEAL +N +LH++PDE++S T + R L+ V+ L P +V LV+++ + + R NY ++++D LPR KQR E + + + N+IA EG RVER E +GKW R A F +K++L ++ + L++ D + L W ++V + AW
Sbjct: 123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGS-----SIYKALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRIT-----GIDDMTSAYARGGGLSI--VGNRLAKLAKQFNVPFEF--------NSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVS-----------------------------------TENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEERDGALYLGWMHRDLVASCAW 489
BLAST of rna-XM_004509017.3 vs. Araport11
Match: | (Symbols: PAT1 | phytochrome a signal transduction 1 | chr5:19522497-19524053 REVERSE LENGTH=490) HSP 1 Score: 139.043 bits (349), Expect = 3.021e-35 Identity = 110/422 (26.07%), Postives = 183/422 (43.36%), Query Frame = 0
Query: 134 LVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRL-VYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAN-ICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAW 553
LV CA A+ ND+ +A ++ L + G+ QRL L L + A +G+ + A N + + ++ P+ +FG+ +AN +I EA + + +HI+D Q TLI A A+R P I++T ID + LS +G++L A+ NV EF N + + ++ + L V GEAL +N +LH++PDE++S T + R L+ V+ L P +V LV+++ + + R NY ++++D LPR KQR E + + + N+IA EG RVER E +GKW R A F +K++L ++ + L++ D + L W ++V + AW
Sbjct: 123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGS-----SIYKALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRIT-----GIDDMTSAYARGGGLSI--VGNRLAKLAKQFNVPFEF--------NSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVS-----------------------------------TENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEERDGALYLGWMHRDLVASCAW 489
BLAST of rna-XM_004509017.3 vs. Araport11
Match: | (Symbols: PAT1 | phytochrome a signal transduction 1 | chr5:19522497-19524053 REVERSE LENGTH=490) HSP 1 Score: 139.043 bits (349), Expect = 3.021e-35 Identity = 110/422 (26.07%), Postives = 183/422 (43.36%), Query Frame = 0
Query: 134 LVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRL-VYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAN-ICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAW 553
LV CA A+ ND+ +A ++ L + G+ QRL L L + A +G+ + A N + + ++ P+ +FG+ +AN +I EA + + +HI+D Q TLI A A+R P I++T ID + LS +G++L A+ NV EF N + + ++ + L V GEAL +N +LH++PDE++S T + R L+ V+ L P +V LV+++ + + R NY ++++D LPR KQR E + + + N+IA EG RVER E +GKW R A F +K++L ++ + L++ D + L W ++V + AW
Sbjct: 123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGS-----SIYKALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRIT-----GIDDMTSAYARGGGLSI--VGNRLAKLAKQFNVPFEF--------NSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVS-----------------------------------TENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEERDGALYLGWMHRDLVASCAW 489
BLAST of rna-XM_004509017.3 vs. Araport11
Match: | (Symbols: PAT1 | phytochrome a signal transduction 1 | chr5:19522497-19524053 REVERSE LENGTH=490) HSP 1 Score: 139.043 bits (349), Expect = 3.021e-35 Identity = 110/422 (26.07%), Postives = 183/422 (43.36%), Query Frame = 0
Query: 134 LVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRL-VYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAN-ICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAW 553
LV CA A+ ND+ +A ++ L + G+ QRL L L + A +G+ + A N + + ++ P+ +FG+ +AN +I EA + + +HI+D Q TLI A A+R P I++T ID + LS +G++L A+ NV EF N + + ++ + L V GEAL +N +LH++PDE++S T + R L+ V+ L P +V LV+++ + + R NY ++++D LPR KQR E + + + N+IA EG RVER E +GKW R A F +K++L ++ + L++ D + L W ++V + AW
Sbjct: 123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGS-----SIYKALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRIT-----GIDDMTSAYARGGGLSI--VGNRLAKLAKQFNVPFEF--------NSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVS-----------------------------------TENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEERDGALYLGWMHRDLVASCAW 489
BLAST of rna-XM_004509017.3 vs. Araport11
Match: | (Symbols: SCL1 | SCARECROW-like 1 | chr1:7509721-7511502 FORWARD LENGTH=593) HSP 1 Score: 138.272 bits (347), Expect = 1.581e-34 Identity = 108/425 (25.41%), Postives = 187/425 (44.00%), Query Frame = 0
Query: 131 EQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAN-ICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAML-DEHAAGWGLKKEDEHIVLTWKGHNVVFASAW 553
+Q+L+ CA A+ + A ++ L I GD +QR+A + L R A +G K + + + E R + +++ ++ P +FGF AAN +I+EA +G +HI+D Q TLI +IA P ++LT D Q ++ L E+L A V+ +F+ + S + S + GE L++N LH++PDE++ TT + R L V+ L+P LV +V++DV+ ++ R A+ Y ++++D LPR S++R E + I N++A EG +R+ER E GKW RM A F + ++ ++ ++ + LK+E + W+ +++ ASAW
Sbjct: 223 KQILISCARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMAASG--KFIYRALKCKEPPSDE--RLAAMQV--LFEVCPCFKFGFLAANGAILEAIKGEEEVHIIDFDINQGNQYMTLIRSIAELPGKRPRLRLTGIDDPESVQRSIGGLRIIGLRLEQL-------AEDNGVSFKFKAMPSKTSIVSPSTLG-------CKPGETLIVNFAFQLHHMPDESV-----------------------------------TTVNQRDELLHMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASAW 592
BLAST of rna-XM_004509017.3 vs. Araport11
Match: | (Symbols: SCL21 | SCARECROW-like 21 | chr2:1720575-1721816 REVERSE LENGTH=413) HSP 1 Score: 135.191 bits (339), Expect = 1.875e-34 Identity = 104/426 (24.41%), Postives = 191/426 (44.84%), Query Frame = 0
Query: 130 MEQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLT-VADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAN-ICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAW 553
++ +LV CA A+ N++ +A+ + L + G+ QRL L L R A +G+ + + + E++ F + + ++ P+ +FG+ +AN +I EA + IHI+D Q LI A A+R +P I++T V D + + + +L A+ +V F VS +E+L V+ GEAL +N MLH++PDE++S+ + R L+ V+ L P +V LV+++ + ++ + R +Y ++++D LPR K+R E + + + N+IA EG +R+ER E +GKW+ R A F+ ++A+L +++ G+ +++ D + L W +V + AW
Sbjct: 50 LKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGS-----SIYKSLQSREPESYEF-LSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWIALIQAFAARPGGAPNIRITGVGDGSVLVTVK---------------KRLEKLAKKFDVPFRFNAVSRPSCE---VEVENLDVR----DGEALGVNFAYMLHHLPDESVSM-----------------------------------ENHRDRLLRMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEERDGALYLGWMDRILVSSCAW 412
BLAST of rna-XM_004509017.3 vs. Araport11
Match: | (Symbols: SCL5 | scarecrow-like 5 | chr1:18737398-18739559 REVERSE LENGTH=601) HSP 1 Score: 137.117 bits (344), Expect = 4.660e-34 Identity = 106/438 (24.20%), Postives = 193/438 (44.06%), Query Frame = 0
Query: 118 SKALTNFGDTNCMEQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRL-VYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAN-ICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAW 553
S + + GD ++ +L CA A+E D+ + ++ L + G+ QRL L L R A +G+ + + ++ E + I + P+ +FG+ +AN +I EA + S +HI+D + Q +LI A+ +R P +++T D F L+L +G +L A V EF +G A + +++L V +GEAL +N ++LH++PDE++ T + R L+ V+ L P +V LV+++ + + + R N+ ++++D L R K+R E + + ++ N+IA EGV+R ER E +GKW R A F+ +K +L+ ++ + L++ D + L WK ++ + AW
Sbjct: 222 SMEMISRGD---LKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSS--IYKALRCKDPTGPELLTYMHI----LYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGGQWVSLIRALGARPGGPPNVRITGIDDPRSS---FARQGGLEL----VGQRLGKLAEMCGVPFEF--------HGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESV-----------------------------------TVENHRDRLLRLVKHLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEERDGALYLGWKNQPLITSCAW 600
BLAST of rna-XM_004509017.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SN22|SCL32_ARATH (Scarecrow-like protein 32 OS=Arabidopsis thaliana OX=3702 GN=SCL32 PE=1 SV=1) HSP 1 Score: 490.73 bits (1262), Expect = 6.154e-170 Identity = 246/445 (55.28%), Postives = 315/445 (70.79%), Query Frame = 0
Query: 115 FPTSKALTNFGDTNCMEQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRA-AKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASR-HEVSPLIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKE--DEHIVLTWKGHNVVFASAWLP 555
FP+ K L GD N MEQLL+HCA AI++ND L QILWVLNNIAPPDGDS QRL ++FLRAL +RA +K T + + L HRFS++ELA FVDLTPWHRFGF AANA+I+ A EG+S +HIVDLS THCMQIPTLIDA+ASR ++ PL+KLTV ++ H PP +++SYEELGSKLVNFA +RN+T+EF +V S+Y++GF+SL++ LR+ ++ EALV+NCHMML YIP+E L T++++SLR++FLK +R L+P +V L++EDVDLTS NLV RL+SAFNY WIP+DT DTF+ S+QR+WYEA I WKIENV+A EG +RVER E +W +RMR A F G+ E+ V +VKAML+EHA GWG+KKE DE +VLTWKGH+VVFA+ W+P
Sbjct: 12 FPSPKPLRGCGDANFMEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTLSSTISFLPQADEL----HRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSD------HFPPFINISYEELGSKLVNFATTRNITMEFTIVPSTYSDGFSSLLQQLRIYPSSFN-EALVVNCHMMLRYIPEEPL---------------------------------TSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTDTFM---SEQRRWYEAEISWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHAVGWGMKKEDDDESLVLTWKGHSVVFATVWVP 409
BLAST of rna-XM_004509017.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q2V2T9|SCL16_ARATH (Putative scarecrow-like protein 16 OS=Arabidopsis thaliana OX=3702 GN=SCL16 PE=5 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 6.342e-72 Identity = 128/240 (53.33%), Postives = 162/240 (67.50%), Query Frame = 0
Query: 255 MQIPTLIDAIASR--HEVSPLIKLTV-ADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDE 491
MQIPTLID++A++ + PL+KLTV A A FH PP+L +SYEELGSKLVNFA +RNV +EFR++SSSY++G +SLIE LR+ V+ EALV+NCHMMLHYIPDE L T++LRS+FLK +R L+PT+V L+DED D TS N + RLRS +NY+WIPYDT + FL RGS+QRQWYEA+I WKI+NV+A EG +RVER E
Sbjct: 1 MQIPTLIDSMANKLHKKPPPLLKLTVIASDAE-----FHPPPLLGISYEELGSKLVNFATTRNVAMEFRIISSSYSDGLSSLIEQLRIDPFVF-NEALVVNCHMMLHYIPDEIL------------------------------------TSNLRSVFLKELRDLNPTIVTLIDEDSDFTSTNFISRLRSLYNYMWIPYDTAEMFLTRGSEQRQWYEADISWKIDNVVAKEGAERVERLE 198
BLAST of rna-XM_004509017.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SZF7|SHR_ARATH (Protein SHORT-ROOT OS=Arabidopsis thaliana OX=3702 GN=SHR PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 3.727e-50 Identity = 128/440 (29.09%), Postives = 207/440 (47.05%), Query Frame = 0
Query: 131 EQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGT-C-KMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHANI---DQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTS-------NNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAG-WGLKK--EDEHIVLTWKGHNVVFASAWLP 555
+ +L+ A A D AQQILW LN ++ P GD+ Q+LA+ FL+AL NR +G C + +V + + E+ R ++++ F +++PW FG AAN +I+EA +G + IHIVD+SST C Q PTL++A+A+R + +P ++LT AN DQ H +E+G+++ FAR V +F ++ + L E + V E L INC +H I A+ S R + + R L P +V +V+E+ DL + + + + +++ + PR S +R E I +++A E ER E KW +RMRN+ F +G+ +E +V+A+L + G W + + + I L W+ VV+ASAW P
Sbjct: 144 DSVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLK---FQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASH------RMMKEIGNRMEKFARLMGVPFKFNII-----HHVGDLSEFDLNELDVKPDEVLAINCVGAMHGI---------------------------------------ASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRYKEGVWSMVQCPDAAGIFLCWRDQPVVWASAWRP 530
BLAST of rna-XM_004509017.3 vs. UniProtKB/Swiss-Prot
Match: sp|A2YN56|SHR1_ORYSI (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica OX=39946 GN=SHR1 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 6.795e-37 Identity = 114/456 (25.00%), Postives = 193/456 (42.32%), Query Frame = 0
Query: 132 QLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIE--------ATEGFSVIHIVDLSSTHCMQIPTLIDAIASRH-EVSPLIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNN----------------LVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKK-------EDEHIVLTWKGHNVVFASAWLP 555
QLL+ CA ++ D QQ++W+LN +A P GD Q+LA+ FL+ L R +G + + + N + ++ R + + F +L+PW FG AAN +I+E A+ HI+DLS+T C Q PTL++A+A+R + +P + +T A V ++ E+G ++ FAR V FR V ++ A L R + AL +NC L + V SL R LDP +V +V+E+ DL +++ + + D+++ P+ S +R E I ++++ + +ER E W +RMR+A F + F E+ +V+++L + GW +++ + L WK +V+ASAW P
Sbjct: 194 QLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASGQRTLRTLAAASDRNTSFDSTRRTAL---RFQELSPWSSFGHVAANGAILESFLEVAAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAVQRVM----REIGQRMEKFARLMGVPFRFRAV--HHSGDLAELDLDALDLREGGATTALAVNCVNSLRGV---------------------------------VPGRARRRDAFAASL-----RRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSMREAGTDDSAAGAGVFLAWKEQPLVWASAWRP 602
BLAST of rna-XM_004509017.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8H2X8|SHR1_ORYSJ (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR1 PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 7.771e-37 Identity = 119/458 (25.98%), Postives = 194/458 (42.36%), Query Frame = 0
Query: 132 QLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNG--TCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIE--------ATEGFSVIHIVDLSSTHCMQIPTLIDAIASRH-EVSPLIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNN----------------LVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKK-------EDEHIVLTWKGHNVVFASAWLP 555
QLL+ CA ++ D QQ++W+LN +A P GD Q+LA+ FL+ L R +G T + L S+ RN T R ++ F +L+PW FG AAN +I+E A+ HI+DLS+T C Q PTL++A+A+R + +P + +T A V ++ E+G ++ FAR V FR V ++ A L R + AL +NC L + V SL R LDP +V +V+E+ DL +++ + + D+++ P+ S +R E I ++++ + +ER E W +RMR+A F + F E+ +V+++L + GW +++ + L WK +V+ASAW P
Sbjct: 194 QLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTLRTLAAASD-RNTSFDSTRRTAL----RFQELSPWSSFGHVAANGAILESFLEVAAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAVQRVM----REIGQRMEKFARLMGVPFRFRAV--HHSGDLAELDLDALDLREGGATTALAVNCVNSLRGV---------------------------------VPGRARRRDAFAASL-----RRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSMREAGTDDSAAGAGVFLAWKEQPLVWASAWRP 602
BLAST of rna-XM_004509017.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q75I13|SHR2_ORYSJ (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR2 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.787e-36 Identity = 117/468 (25.00%), Postives = 193/468 (41.24%), Query Frame = 0
Query: 132 QLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEA-------------------TEGFSVIHIVDLSSTHCMQIPTLIDAIASR-HEVSPLIKLTVADHANIDQIPFHVP-PMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDL------------TSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLK-----------KEDEHIVLTWKGHNVVFASAWLP 555
QLL+ CA A+ D QQ++W+LN +A P GD +Q+LA+ FL+ L R +G + + + N + ++ R + ++ F +L+PW FG AAN +I+E+ + + +HI+DLS+T C Q PTL++A+A+R + +P + +T +P P E+G +L FAR V FR V ++ A L R + AL +NC L + R F+ ++R L+P +V +V+E+ DL T V + D+++ P+ S +R E + I ++++ Q ER E W +RMR+A F F E+ +V+++L + GW ++ L WK VV+ASAW P
Sbjct: 190 QLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLRTLATASDRNASFDSTRRTALK---FQELSPWTPFGHVAANGAILESFLEAAAAGAAASSSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTV-------VPTAAPSAAAQRVMREIGQRLEKFARLMGVPFSFRAV--HHSGDLADLDLAALDLREGGATAALAVNCVNALRGV------------------------------------------ARGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQSAERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATDDAAGAAAAGAFLAWKEQPVVWASAWKP 603
BLAST of rna-XM_004509017.3 vs. UniProtKB/Swiss-Prot
Match: sp|A2XIA8|SHR2_ORYSI (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica OX=39946 GN=SHR2 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 4.783e-36 Identity = 117/468 (25.00%), Postives = 192/468 (41.03%), Query Frame = 0
Query: 132 QLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEA-------------------TEGFSVIHIVDLSSTHCMQIPTLIDAIASR-HEVSPLIKLTVADHANIDQIPFHVP-PMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDL------------TSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLK-----------KEDEHIVLTWKGHNVVFASAWLP 555
QLL+ CA A+ D QQ++W+LN +A P GD +Q+LA+ FL+ L R +G + + + N + ++ R + ++ F +L+PW FG AAN +I+E+ + + +HI+DLS+T C Q PTL++A+A+R + +P + +T +P P E+G +L FAR V FR V + A L R + AL +NC L + R F+ ++R L+P +V +V+E+ DL T V + D+++ P+ S +R E + I ++++ Q ER E W +RMR+A F F E+ +V+++L + GW ++ L WK VV+ASAW P
Sbjct: 190 QLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLRTLATASDRNASFDSTRRTALK---FQELSPWTPFGHVAANGAILESFLEAAAAGAAAASSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTV-------VPTAAPSAAAQRVMREIGQRLEKFARLMGVPFSFRAV--HHAGDLADLDLAALDLREGGATAALAVNCVNALRGV------------------------------------------ARGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQSAERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATDDAAGAAAAGAFLAWKEQPVVWASAWKP 603
BLAST of rna-XM_004509017.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LDL7|PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana OX=3702 GN=PAT1 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.940e-34 Identity = 110/422 (26.07%), Postives = 183/422 (43.36%), Query Frame = 0
Query: 134 LVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRL-VYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAN-ICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAW 553
LV CA A+ ND+ +A ++ L + G+ QRL L L + A +G+ + A N + + ++ P+ +FG+ +AN +I EA + + +HI+D Q TLI A A+R P I++T ID + LS +G++L A+ NV EF N + + ++ + L V GEAL +N +LH++PDE++S T + R L+ V+ L P +V LV+++ + + R NY ++++D LPR KQR E + + + N+IA EG RVER E +GKW R A F +K++L ++ + L++ D + L W ++V + AW
Sbjct: 123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGS-----SIYKALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRIT-----GIDDMTSAYARGGGLSI--VGNRLAKLAKQFNVPFEF--------NSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVS-----------------------------------TENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEERDGALYLGWMHRDLVASCAW 489
BLAST of rna-XM_004509017.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SDQ3|SCL1_ARATH (Scarecrow-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=SCL1 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.547e-33 Identity = 108/425 (25.41%), Postives = 187/425 (44.00%), Query Frame = 0
Query: 131 EQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAN-ICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAML-DEHAAGWGLKKEDEHIVLTWKGHNVVFASAW 553
+Q+L+ CA A+ + A ++ L I GD +QR+A + L R A +G K + + + E R + +++ ++ P +FGF AAN +I+EA +G +HI+D Q TLI +IA P ++LT D Q ++ L E+L A V+ +F+ + S + S + GE L++N LH++PDE++ TT + R L V+ L+P LV +V++DV+ ++ R A+ Y ++++D LPR S++R E + I N++A EG +R+ER E GKW RM A F + ++ ++ ++ + LK+E + W+ +++ ASAW
Sbjct: 223 KQILISCARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMAASG--KFIYRALKCKEPPSDE--RLAAMQV--LFEVCPCFKFGFLAANGAILEAIKGEEEVHIIDFDINQGNQYMTLIRSIAELPGKRPRLRLTGIDDPESVQRSIGGLRIIGLRLEQL-------AEDNGVSFKFKAMPSKTSIVSPSTLG-------CKPGETLIVNFAFQLHHMPDESV-----------------------------------TTVNQRDELLHMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASAW 592
BLAST of rna-XM_004509017.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9S7H5|SCL21_ARATH (Scarecrow-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=SCL21 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.818e-33 Identity = 104/426 (24.41%), Postives = 191/426 (44.84%), Query Frame = 0
Query: 130 MEQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLT-VADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAN-ICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAW 553
++ +LV CA A+ N++ +A+ + L + G+ QRL L L R A +G+ + + + E++ F + + ++ P+ +FG+ +AN +I EA + IHI+D Q LI A A+R +P I++T V D + + + +L A+ +V F VS +E+L V+ GEAL +N MLH++PDE++S+ + R L+ V+ L P +V LV+++ + ++ + R +Y ++++D LPR K+R E + + + N+IA EG +R+ER E +GKW+ R A F+ ++A+L +++ G+ +++ D + L W +V + AW
Sbjct: 50 LKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGS-----SIYKSLQSREPESYEF-LSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWIALIQAFAARPGGAPNIRITGVGDGSVLVTVK---------------KRLEKLAKKFDVPFRFNAVSRPSCE---VEVENLDVR----DGEALGVNFAYMLHHLPDESVSM-----------------------------------ENHRDRLLRMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEERDGALYLGWMDRILVSSCAW 412
BLAST of rna-XM_004509017.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YS74|A0A1S2YS74_CICAR (Scarecrow-like protein 32 OS=Cicer arietinum OX=3827 GN=LOC101509453 PE=3 SV=1) HSP 1 Score: 1164.06 bits (3010), Expect = 0.000e+0 Identity = 556/556 (100.00%), Postives = 556/556 (100.00%), Query Frame = 0
Query: 1 MAHVRQIKYLLSYRYTTKSQLPNRNNVVAGYFTCYQNPKQKQCAPTIYRDSNLKIKTTPPKSLRRAYFVALSMMQFTTSVPYLHQTKTHFSNSNPSSMNKNNQIPNRNTNIKPWFPTSKALTNFGDTNCMEQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA 556
MAHVRQIKYLLSYRYTTKSQLPNRNNVVAGYFTCYQNPKQKQCAPTIYRDSNLKIKTTPPKSLRRAYFVALSMMQFTTSVPYLHQTKTHFSNSNPSSMNKNNQIPNRNTNIKPWFPTSKALTNFGDTNCMEQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA
Sbjct: 1 MAHVRQIKYLLSYRYTTKSQLPNRNNVVAGYFTCYQNPKQKQCAPTIYRDSNLKIKTTPPKSLRRAYFVALSMMQFTTSVPYLHQTKTHFSNSNPSSMNKNNQIPNRNTNIKPWFPTSKALTNFGDTNCMEQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA 556
BLAST of rna-XM_004509017.3 vs. UniProtKB/TrEMBL
Match: tr|G7JCU8|G7JCU8_MEDTR (GRAS family transcription factor OS=Medicago truncatula OX=3880 GN=MTR_4g095500 PE=3 SV=1) HSP 1 Score: 804.283 bits (2076), Expect = 0.000e+0 Identity = 414/488 (84.84%), Postives = 433/488 (88.73%), Query Frame = 0
Query: 73 MMQFTTSVPYLHQTKTHFSNSNPSSMNKNNQIPNRNTNIKPWFPTSKALTNFGDTNCMEQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVE--VSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHANI--DQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA 556
M QFT S+PYLHQT T FSN + SSMNKNNQ+P + KPWFPTSKALT FGDTNCMEQLLVHCA+AIETNDVTLAQQILWVLNNIAP DGDSNQRLA SFLRALTNRA K GTCKMLVE SNA NNL I+THRFS+IELANFVDLTPWHRFG+ AANA+I+EATEGFSVIHIVDLSSTHCMQIPTLIDAIA+RHEV+PLIKLTV+DHAN DQ+ +PP LDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLS NSNSYVYD+ SS T T TTTSLRSLFL A+RGLDPTLV+LVDEDVDLTSNNLV RLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEA+ICWKIENVIAHEGVQRVER E I KWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA
Sbjct: 1 MTQFTHSLPYLHQTTTTFSNPS-SSMNKNNQVP-PDKPTKPWFPTSKALTTFGDTNCMEQLLVHCANAIETNDVTLAQQILWVLNNIAPQDGDSNQRLAYSFLRALTNRAVKTGTCKMLVEQVYSNAHNNLTIDTHRFSVIELANFVDLTPWHRFGYAAANAAILEATEGFSVIHIVDLSSTHCMQIPTLIDAIANRHEVAPLIKLTVSDHANCNSDQL---IPPKLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLS---------NSNSYVYDS----MSSTTTATTITTTTTSLRSLFLNALRGLDPTLVILVDEDVDLTSNNLVSRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGVQRVERVEPISKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA 470
BLAST of rna-XM_004509017.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3ND57|A0A2K3ND57_TRIPR (SCARECROW-like protein 32-like OS=Trifolium pratense OX=57577 GN=L195_g024263 PE=3 SV=1) HSP 1 Score: 786.563 bits (2030), Expect = 0.000e+0 Identity = 404/462 (87.45%), Postives = 419/462 (90.69%), Query Frame = 0
Query: 98 MNKNNQIPNRNTNIKPWFPTSKALTNFGDTNCMEQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVE--VSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHAN-IDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA 556
MNKNNQIP KPWFPTSKALT FGDTNCMEQLLVHCA+AIETNDVTLAQQILWVLNNIAP DGDSNQRLA SFLRALTNRAAK GTCKMLVE SNA NNL IETHRFS+IELANFVDLTPWHRFG+ AANA+I+EATEGFSVIHIVDLSSTHCMQIPTLIDAIA+RHEV PLIKLTV+DH N IDQIP P LDLSY+ELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQR+VYSGEALVINCHMMLHYIPDETLS NSNSYVYD+ SS S++ T TTTATTTSLRSLFL A+RGLDPTLV+LVDEDVDLTSNNLV RLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEA+ICWKIENVIAHEGVQRVERDE IGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDE IVLTWKGHNVVFASAWLPA
Sbjct: 1 MNKNNQIPT-----KPWFPTSKALTTFGDTNCMEQLLVHCANAIETNDVTLAQQILWVLNNIAPQDGDSNQRLAYSFLRALTNRAAKTGTCKMLVEQVYSNAHNNLTIETHRFSVIELANFVDLTPWHRFGYAAANAAILEATEGFSVIHIVDLSSTHCMQIPTLIDAIANRHEVPPLIKLTVSDHDNNIDQIP----PKLDLSYQELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRMVYSGEALVINCHMMLHYIPDETLS---------NSNSYVYDSMSSVSTTTTTT-TTTATTTSLRSLFLTALRGLDPTLVILVDEDVDLTSNNLVNRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGVQRVERDEPIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDECIVLTWKGHNVVFASAWLPA 443
BLAST of rna-XM_004509017.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6PQC1|A0A2Z6PQC1_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_183300 PE=3 SV=1) HSP 1 Score: 764.992 bits (1974), Expect = 0.000e+0 Identity = 396/462 (85.71%), Postives = 415/462 (89.83%), Query Frame = 0
Query: 98 MNKNNQIPNRNTNIKPWFPTSKALTNFGDTNCMEQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVE--VSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHAN-IDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA 556
MNKNNQIP KPWFPTSKALT FGDTNCMEQLLVHCA+AIETNDVTLAQQILWVLNNIAP DGDSNQRLA SFLRALTNRAAK GTCKMLVE SNA NNL IETHRFS+IELANFVDLTPWHRFG+ AANA+I+EATEGFSVIHIVDLSSTHCMQIPTLIDAIA+RHE+ PLIKLTV+DH N IDQIP P LDLSY+ELGSKLVNFARSRNVTLEFRVVSSSYTNGF+SLIEHLRVQR+VYSGEAL+INCHMMLHYIPDETLS NSNSYVYD+ S++V+ TT TTTSLRSLFL A+RGLDPTLV+LVDEDVDLTSNNLV RLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEA+ICWKIENVIAHEGVQRVER E IGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDE IVLTWKGHNVVFASAWLPA
Sbjct: 1 MNKNNQIPT-----KPWFPTSKALTTFGDTNCMEQLLVHCANAIETNDVTLAQQILWVLNNIAPQDGDSNQRLAYSFLRALTNRAAKTGTCKMLVEQVYSNAHNNLTIETHRFSVIELANFVDLTPWHRFGYAAANAAILEATEGFSVIHIVDLSSTHCMQIPTLIDAIANRHEIPPLIKLTVSDHDNNIDQIP----PKLDLSYQELGSKLVNFARSRNVTLEFRVVSSSYTNGFSSLIEHLRVQRMVYSGEALIINCHMMLHYIPDETLS---------NSNSYVYDS-----MSSSVSTTTATTTTSLRSLFLTALRGLDPTLVILVDEDVDLTSNNLVTRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGVQRVERVEPIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDECIVLTWKGHNVVFASAWLPA 439
BLAST of rna-XM_004509017.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8KXK4|A0A8B8KXK4_ABRPR (Scarecrow-like protein 32 OS=Abrus precatorius OX=3816 GN=LOC113860169 PE=3 SV=1) HSP 1 Score: 731.865 bits (1888), Expect = 0.000e+0 Identity = 377/496 (76.01%), Postives = 410/496 (82.66%), Query Frame = 0
Query: 73 MMQFTTSVPYLHQTKTHFSNSNPSSMNKNNQIPNRNTNIKPW----FPTSKALTNFGDTNCMEQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQR---LVYS-----GEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA 556
M QFT P LHQ T SN NPS MNKN QIP +PW F TSKALTNFGDTNCMEQLLVHCA+AIETNDVTLAQQILWVLNNIA PDGDSNQRLA+ FLRALT RAAK GTCKMLV V +AR N I+TH+FS+I+LANFVDLTPWHRFGFTAAN++I+EATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEV PLIKLTVA+ AN +I PP+LDLSYEELG+KL+NFARSRNV +EFR VSSSY +GFA LIE LRVQ+ LVY+ EALVINCHMMLHYIPDETLS I DT N +SY+YD FSS +S T+SLRSLFLKA+R LDPT+V+LVDED D TSNNLVCRL+SAFNYLWIPYDTVDTFLPRGSKQRQWYE++ICWKIENVIAHEGVQRVER E +WEQRMRNA+FQGI F E+CV EVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAW A
Sbjct: 1 MTQFT---PLLHQI-TPLSNPNPS-MNKN-QIPR----TRPWPATGFLTSKALTNFGDTNCMEQLLVHCANAIETNDVTLAQQILWVLNNIALPDGDSNQRLASGFLRALTARAAKTGTCKMLVGVEDARTNFTIDTHKFSVIQLANFVDLTPWHRFGFTAANSAILEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVPPLIKLTVAN-ANCREI----PPLLDLSYEELGTKLINFARSRNVVMEFRAVSSSYEDGFAVLIEQLRVQQQQNLVYASEARPSEALVINCHMMLHYIPDETLSSIPDT----NPSSYIYD-FSSIVTS----------TSSLRSLFLKALRSLDPTVVILVDEDADFTSNNLVCRLKSAFNYLWIPYDTVDTFLPRGSKQRQWYESDICWKIENVIAHEGVQRVERVEPKNRWEQRMRNASFQGIAFSEDCVAEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWFNA 466
BLAST of rna-XM_004509017.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3R4U0|A0A0S3R4U0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G357500 PE=3 SV=1) HSP 1 Score: 706.827 bits (1823), Expect = 0.000e+0 Identity = 359/473 (75.90%), Postives = 403/473 (85.20%), Query Frame = 0
Query: 94 NPSSMNKNNQIPNRNTNIKPW---FPTSKALTNFGDTNCMEQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSN-ARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQR--LVYS-----GEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLP 555
NP+ MNKN QIP +PW FPTSKALTNF D NCMEQLL+HCA+AI+TNDVTLAQQILWVLNNIA PDGDSNQRLA+SFLRALT RAA+ GTCKMLV V++ AR NL+I+TH+FS+IELANFVDLTPWHRFGFTAANA+I+EATEGFSVIHIVDLS THCMQIPTLIDAIASRHEV PLIKLTV D D +PPMLDLSY+ELG+KLVNFARSRNV +EFRVVSS+Y +GFA LIE LRVQ+ VY+ EALVINCHMMLHYIPDETL + +T+L S +YD+ S+ SS+A++VT+T +SLRSLFLK++RGLDPT+V+LVDED DLTSNNLVCRLR AFNYLWIPYDTVDTFLPRGSKQRQWYEA+ICWKIENVIA EGVQRVER E +WEQRM+NANFQG+ F E+ VGEVK MLDEHAAGWGLK+EDEHIVLTWKGHNVVFASAWLP
Sbjct: 15 NPT-MNKN-QIPR----TRPWPAGFPTSKALTNFADANCMEQLLLHCANAIQTNDVTLAQQILWVLNNIASPDGDSNQRLASSFLRALTARAAQTGTCKMLVAVADHARTNLSIDTHKFSVIELANFVDLTPWHRFGFTAANAAILEATEGFSVIHIVDLSLTHCMQIPTLIDAIASRHEVPPLIKLTVPDATFRD-----IPPMLDLSYDELGAKLVNFARSRNVVMEFRVVSSTYQDGFADLIEQLRVQQQHFVYAVEPRPCEALVINCHMMLHYIPDETLHAMPETDLTS----LLYDSSSAAGSSSAISVTST---SSLRSLFLKSLRGLDPTVVILVDEDADLTSNNLVCRLRCAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAQEGVQRVERVEPKNRWEQRMKNANFQGVAFSEDSVGEVKGMLDEHAAGWGLKREDEHIVLTWKGHNVVFASAWLP 469
BLAST of rna-XM_004509017.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TPK7|A0A0L9TPK7_PHAAN (Scarecrow-like protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0033690 PE=3 SV=1) HSP 1 Score: 706.442 bits (1822), Expect = 0.000e+0 Identity = 357/469 (76.12%), Postives = 400/469 (85.29%), Query Frame = 0
Query: 98 MNKNNQIPNRNTNIKPW---FPTSKALTNFGDTNCMEQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSN-ARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQR--LVYS-----GEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLP 555
MNKN QIP +PW FPTSKALTNF D NCMEQLL+HCA+AI+TNDVTLAQQILWVLNNIA PDGDSNQRLA+SFLRALT RAA+ GTCKMLV V++ AR NL+I+TH+FS+IELANFVDLTPWHRFGFTAANA+I+EATEGFSVIHIVDLS THCMQIPTLIDAIASRHEV PLIKLTV D D +PPMLDLSY+ELG+KLVNFARSRNV +EFRVVSS+Y +GFA LIE LRVQ+ VY+ EALVINCHMMLHYIPDETL + +T+L S +YD+ S+ SS+A++VT+T +SLRSLFLK++RGLDPT+V+LVDED DLTSNNLVCRLR AFNYLWIPYDTVDTFLPRGSKQRQWYEA+ICWKIENVIA EGVQRVER E +WEQRM+NANFQG+ F E+ VGEVK MLDEHAAGWGLK+EDEHIVLTWKGHNVVFASAWLP
Sbjct: 1 MNKN-QIPR----TRPWPAGFPTSKALTNFADANCMEQLLLHCANAIQTNDVTLAQQILWVLNNIASPDGDSNQRLASSFLRALTARAAQTGTCKMLVAVADHARTNLSIDTHKFSVIELANFVDLTPWHRFGFTAANAAILEATEGFSVIHIVDLSLTHCMQIPTLIDAIASRHEVPPLIKLTVPDATFRD-----IPPMLDLSYDELGAKLVNFARSRNVVMEFRVVSSTYQDGFADLIEQLRVQQQHFVYAVEPRPCEALVINCHMMLHYIPDETLHAMPETDLTS----LLYDSSSAAGSSSAISVTST---SSLRSLFLKSLRGLDPTVVILVDEDADLTSNNLVCRLRCAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAQEGVQRVERVEPKNRWEQRMKNANFQGVAFSEDSVGEVKGMLDEHAAGWGLKREDEHIVLTWKGHNVVFASAWLP 452
BLAST of rna-XM_004509017.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445G7K2|A0A445G7K2_GLYSO (Scarecrow-like protein 32 OS=Glycine soja OX=3848 GN=D0Y65_046010 PE=3 SV=1) HSP 1 Score: 704.131 bits (1816), Expect = 0.000e+0 Identity = 365/503 (72.56%), Postives = 408/503 (81.11%), Query Frame = 0
Query: 73 MMQFTTSVPYLHQTKTHFSNSNPSSMNKNNQIPNRNTNIKPW----FPT-SKALTNFGDTNCMEQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASR--HEVSP-LIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQR-----LVYSGE------ALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA 556
M QFT +P LH T NP+ MNKN QIP +PW FPT SKAL+N GD NCMEQLLVHCA+AIETNDVTLAQQILWVLNNIAP DGDSNQRLA+ FLRALT RAAK GTCKMLV +A NL+I+THRF+IIELANFVDLTPWHRFGFTAANA+++EATEGFSV+HIVDLS THCMQIPTL+DAIASR H+ SP +IKLTVAD D H+PPMLDLSYEELG+KLV+FARSRNV +EFRVVSSSY +GFASLIEHLRVQ+ VY+ E ALVINCHMMLHYIPDETLS DT ++ SYVYD+ ++ + T+SLRSLFLK++RGLDPT+V+LVDED DLTSNNLVCRLRSAFN+LWIPYDTVDTFLPRGSKQRQWYEA+ CWKIENVIAHEG+QRVER E KWE+RM+NA+FQG+GF E+ V EVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA
Sbjct: 1 MTQFTPPLPPLHHQITSLL-PNPNMMNKN-QIPRP----RPWPASGFPTTSKALSNLGDANCMEQLLVHCANAIETNDVTLAQQILWVLNNIAPHDGDSNQRLASGFLRALTARAAKTGTCKMLV---SAGTNLSIDTHRFNIIELANFVDLTPWHRFGFTAANAAVLEATEGFSVVHIVDLSLTHCMQIPTLVDAIASRQHHDASPPIIKLTVADACCRD----HIPPMLDLSYEELGAKLVSFARSRNVIMEFRVVSSSYQDGFASLIEHLRVQQEQQQHFVYAAEPSTPSEALVINCHMMLHYIPDETLS---DT---TDLTSYVYDS-------SSSAAVSVTPTSSLRSLFLKSLRGLDPTVVILVDEDADLTSNNLVCRLRSAFNFLWIPYDTVDTFLPRGSKQRQWYEADTCWKIENVIAHEGLQRVERVEPKNKWEERMKNASFQGVGFSEDSVAEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA 477
BLAST of rna-XM_004509017.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UQA5|A0A1S3UQA5_VIGRR (Scarecrow-like protein 32 OS=Vigna radiata var. radiata OX=3916 GN=LOC106767804 PE=3 SV=1) HSP 1 Score: 702.975 bits (1813), Expect = 0.000e+0 Identity = 357/474 (75.32%), Postives = 401/474 (84.60%), Query Frame = 0
Query: 94 NPSSMNKNNQIPNRNTNIKPW---FPTSKALTNFGDTNCMEQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSN-ARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQR--LVYS-----GEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA 556
NP+ MNKN QIP +PW FPTSK LTNF D NCMEQLL+HCA+AI+TNDVTLAQQILWVLNNIA PDGDSNQRLA+SFLRALT RAA GTCKMLV V++ AR NL+I+TH+FS+IELANFVDLTPWHRFGFTAANA+I+EATEGFSVIHIVDLS THCMQIPTLIDAIASRHEV PLIKLTV D D +PPMLDLSY+ELG+KLVNFARSRNV +EFRVVSS+Y +GFA LIE LRVQ+ VY+ EALVINCHMMLHY PDETL + +++L S +YD+ S+ SS+A++VT+T +SLRSLFLK++RGLDPT+V+LVDED DLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEA+ICWKIENVIA EGVQRVER E +WEQRM+NANFQG+ F E+ V EVK MLDEHAAGWGLK+EDEHIVLTWKGHNVVFASAWLPA
Sbjct: 15 NPT-MNKN-QIPR----TRPWPAGFPTSKTLTNFADANCMEQLLLHCANAIQTNDVTLAQQILWVLNNIASPDGDSNQRLASSFLRALTARAAHTGTCKMLVAVADHARTNLSIDTHKFSVIELANFVDLTPWHRFGFTAANAAILEATEGFSVIHIVDLSLTHCMQIPTLIDAIASRHEVPPLIKLTVPDATFRD-----IPPMLDLSYDELGAKLVNFARSRNVVMEFRVVSSTYQDGFAGLIEQLRVQQQHFVYAVEPRPCEALVINCHMMLHYTPDETLHAMPESDLTS----LLYDSSSAAGSSSAISVTST---SSLRSLFLKSLRGLDPTVVILVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAQEGVQRVERVEPKNRWEQRMKNANFQGVAFSEDSVAEVKGMLDEHAAGWGLKREDEHIVLTWKGHNVVFASAWLPA 470
BLAST of rna-XM_004509017.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0JYL3|A0A0R0JYL3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_05G103400 PE=3 SV=1) HSP 1 Score: 701.819 bits (1810), Expect = 0.000e+0 Identity = 368/539 (68.27%), Postives = 418/539 (77.55%), Query Frame = 0
Query: 42 QCAP-------TIYRDSNLKIKTTPPKSLRRAYFVALSMMQFTTSVPYLHQTKTHFSNSNPSSMNKNNQIPNRNTNIKPW----FPT-SKALTNFGDTNCMEQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASR--HEVSP-LIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQR--LVYSGE-------ALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA 556
QC P IY+ + ++ PPKS T+S Y + + F P S+ ++P T+ +PW FPT SKAL+NFGD NCMEQLLVHCA+AIETNDVTLAQQILWVLNNIAPPDGDSNQRLA+ FLRALT RAAK GTCKMLV NL+I+THRF++IELANFVDLTPWHRFGFTAANA+I+EATEGFSVIHIVDLS THCMQIPTL+DAIASR HEV P +IKLTVA A+ ++PPMLDLSY+ELG+KLVNFARSRN+ +EFRVVSSSY +GFA LIEHLRVQ+ VY+ E ALVINCHMMLHYIPDETLS DT + S++YD+ SS AA + + T+SLRSLFLK++RGLDPT+V+LVDED DLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEA+ICWKIENVIAHEGVQRVER E +WEQRM+NA+FQG+ F E+ V EVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA
Sbjct: 18 QCPPLHDKIPTPIYKQFDGRLLHMPPKS-------------NTSSASYGY---SQFHPQQPGSLFPKAKVPTTTTSPRPWACTCFPTTSKALSNFGDANCMEQLLVHCANAIETNDVTLAQQILWVLNNIAPPDGDSNQRLASGFLRALTARAAKTGTCKMLVPAGG--TNLSIDTHRFNVIELANFVDLTPWHRFGFTAANAAILEATEGFSVIHIVDLSLTHCMQIPTLVDAIASRNYHEVPPPIIKLTVAADASFRD---NIPPMLDLSYDELGAKLVNFARSRNMVMEFRVVSSSYRDGFAGLIEHLRVQQQHFVYAAESRTTPSEALVINCHMMLHYIPDETLS---DT---TGLTSFLYDS----SSLAASSAVSVTPTSSLRSLFLKSLRGLDPTVVILVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGVQRVERVEPKNRWEQRMKNASFQGVAFSEDSVAEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA 525 The following BLAST results are available for this feature:
BLAST of rna-XM_004509017.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11) Total hits: 10
BLAST of rna-XM_004509017.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot) Total hits: 10
BLAST of rna-XM_004509017.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_004509017.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004509017.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004509017.3; organism=Cicer arietinum; type=mRNA; length=1671bpback to top protein sequence of rna-XM_004509017.3_CaCDCfrontier-NCBI_v1 >rna-XM_004509017.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004509017.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004509017.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=556bpback to top mRNA from alignment at chr7:11573939..11576671+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_004509017.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004509017.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004509017.3; organism=Cicer arietinum; type=mRNA; length=2733bp; location=Sequence derived from: chr7:11573939..11576671+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at chr7:11573939..11576671+ >rna-XM_004509017.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004509017.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004509017.3; organism=Cicer arietinum; type=CDS; length=1671bp; location=Sequence derived from: chr7:11573939..11576671+ (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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