rna-XM_004509094.3

Transcript Overview
Namerna-XM_004509094.3
Unique Namerna-XM_004509094.3_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length738
Product50S ribosomal protein L25-like
References
External references for this mRNA
DatabaseAccession
GeneID101506355
GenBankXM_004509094.3
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr7chromosomechr7:12463109..12464530 +Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascanL208Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ancanL0451Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0452Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0489Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0494Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascanL630Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cacanL258Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cacanL317Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cacanL346Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0907Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0921Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0925Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cancanL169Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cancanL188Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cancanR199Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanL0801Cicer arietinum ICC 4958 genome v2Cicer arietinum
caicanL0970Cicer arietinum ICC 4958 genome v2Cicer arietinum
canccR0928Cajanus cajan Asha genome v1.0Cajanus cajan
canccR1008Cajanus cajan Asha genome v1.0Cajanus cajan
canccR1031Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR734Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR756Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR771Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR786Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canvrvR571Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR523Vicia faba cv. Tiffany genome v1.0Vicia faba
canvrvR618Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canvfhR540Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cantifR544Vicia faba cv. Tiffany genome v1.0Vicia faba
canvrvR629Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canpvR666Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cantifR568Vicia faba cv. Tiffany genome v1.0Vicia faba
canpvR681Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvfhR578Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvfhR609Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canpvR734Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvssR632Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR635Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR641Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR681Vicia sativa cv. Studenica genome v1.0Vicia sativa
canzwsR479Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR518Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuaR523Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuaR530Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canzwsR491Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuR556Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuR571Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR530Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuR577Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canpsR609Pisum sativum Cameor genome v1aPisum sativum
canpsR615Pisum sativum Cameor genome v1aPisum sativum
canpsR684Pisum sativum Cameor genome v1aPisum sativum
avjcanL267Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL269Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL527Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL634Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR485Cicer arietinum
cancarR491Cicer arietinum
cancarR494Cicer arietinum
cancarR516Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Cr_06186.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Ca_09270Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101506355gene-LOC101506355_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_004509094.3-1exon-XM_004509094.3-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004509094.3-2exon-XM_004509094.3-2_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_004509094.3-3exon-XM_004509094.3-3_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_004509151.1cds-XP_004509151.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS
cds-XP_004509151.1cds-XP_004509151.1_CaCDCfrontier-NCBI_v1_2Cicer arietinumCDS
cds-XP_004509151.1cds-XP_004509151.1_CaCDCfrontier-NCBI_v1_3Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_004509094.3_CaCDCfrontier-NCBI_v1rna-XM_004509094.3_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_004509094.3_CaCDCfrontier-NCBI_v1rna-XM_004509094.3_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


Homology
[Close]
BLAST of rna-XM_004509094.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:26701233-26702531 REVERSE LENGTH=249)

HSP 1 Score: 307.76 bits (787), Expect = 3.489e-106
Identity = 154/243 (63.37%), Postives = 186/243 (76.54%), Query Frame = 0 
Query:    1 MAQWSRSAAGHLRTLEANRQYL--SALRRS-----HYHTIQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTS 236
            MA+W R     LR++ A    L  S+  RS      Y TIQAIPRE TG  V+ARDR  GRIPAVVF Q+LLD ++  R  SRK LLT +KKQIK++++ + +PFFCST F LQIRAG GS+ L+E+G VLP+K+HRDEE+G ILNLVFVWA+DG +LKVDVPVVFKG D CPGLQKGG L  IR++LK L P+EHIPSKIEVD+S LDIEDK+ ++D+  HPSLKLLSKNE MP+CKIV TS
Sbjct:    1 MAKWWRG----LRSVTAEVADLPASSFGRSIRCIHQYQTIQAIPREATGRGVSARDRTIGRIPAVVFPQSLLDTDASKRGVSRKQLLTADKKQIKSIIDSVGLPFFCSTTFQLQIRAGQGSSTLVESGRVLPLKVHRDEETGKILNLVFVWADDGEKLKVDVPVVFKGLDHCPGLQKGGNLRTIRSTLKLLGPAEHIPSKIEVDVSNLDIEDKVLLQDVVFHPSLKLLSKNETMPVCKIVATS 239
[Close]
BLAST of rna-XM_004509094.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:12315016-12316659 REVERSE LENGTH=264)

HSP 1 Score: 171.4 bits (433), Expect = 1.832e-52
Identity = 89/220 (40.45%), Postives = 135/220 (61.36%), Query Frame = 0 
Query:   16 EANRQYLSALRR---SHYHTIQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKI 232
            E    YL    R    H  TI A+PR  +G  ++A++R  GR+P+++F Q       D +    K L++V+  QI+ ++N +   FF S  F +++RA  GS  ++E    LP  IH    +   LN+ F+ A  G  LKVD+P+VF G+DV PGL+KG  LN I+ ++K+LCP+E IP  IEVD+S+LDI  K+ M D++VHP+LKL+ K+++ PI K+
Sbjct:   34 ETQLTYLPGFPRPDPKHAETILAVPRSVSGKSISAKERKAGRVPSIIFEQE------DGQHGGNKRLISVQTNQIRKLVNHLGYSFFLSRLFDVEVRAEIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPGALLKVDIPLVFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPALKLI-KSKDEPIVKV 246
[Close]
BLAST of rna-XM_004509094.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:12315016-12316659 REVERSE LENGTH=277)

HSP 1 Score: 167.162 bits (422), Expect = 9.978e-51
Identity = 91/233 (39.06%), Postives = 137/233 (58.80%), Query Frame = 0 
Query:   16 EANRQYLSALRR---SHYHTIQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLP-------------IKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKI 232
            E    YL    R    H  TI A+PR  +G  ++A++R  GR+P+++F Q       D +    K L++V+  QI+ ++N +   FF S  F +++RA  GS  ++E    LP             IKIH    +   LN+ F+ A  G  LKVD+P+VF G+DV PGL+KG  LN I+ ++K+LCP+E IP  IEVD+S+LDI  K+ M D++VHP+LKL+ K+++ PI K+
Sbjct:   34 ETQLTYLPGFPRPDPKHAETILAVPRSVSGKSISAKERKAGRVPSIIFEQE------DGQHGGNKRLISVQTNQIRKLVNHLGYSFFLSRLFDVEVRAEIGSDEVIEKVRALPRAVKSPFLSLMKLIKIHLHSGTDAPLNVTFIRAPPGALLKVDIPLVFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPALKLI-KSKDEPIVKV 259
[Close]
BLAST of rna-XM_004509094.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q3YT12|RL25_EHRCJ (Large ribosomal subunit protein bL25 OS=Ehrlichia canis (strain Jake) OX=269484 GN=rplY PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.581e-17
Identity = 68/223 (30.49%), Postives = 100/223 (44.84%), Query Frame = 0 
Query:   33 IQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHL--LETGT----VLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSL-----GNQAPVA 244
            I A  RE  G+  A   R  G IPAVV+      KN DS S                        F     F  + R+ + STHL  LE G     VL   + +   +  I ++ F + + GTE+K++VP++F  E  C G+++GGVLN +  +L   C    I   IE+D+S L     I + D+ + P + ++ K  N  I  I  TS+     G+Q P A
Sbjct:    9 INASLRENVGTGPARAVRRNGGIPAVVY-----GKNRDSLSV-----------------------FLSDREFLSKHRSAALSTHLIELEIGDKKEYVLMRDVQKHPVTDRIQHVDFQFIDYGTEIKIEVPLIFTNEQKCIGVKRGGVLNILHRTLSIKCLPNAILQNIEIDLSDLTAGHSIHVSDLNLPPEINVVMKEHNPAIVTISSTSMEKEGEGSQEPTA 203
[Close]
BLAST of rna-XM_004509094.3 vs. UniProtKB/Swiss-Prot
Match: sp|B2IG64|RL25_BEII9 (Large ribosomal subunit protein bL25 OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIMB 8712) OX=395963 GN=rplY PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.414e-16
Identity = 53/203 (26.11%), Postives = 95/203 (46.80%), Query Frame = 0 
Query:   32 TIQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVP 234
            T+ A  R  TG   A   R +GRIP V++         D+        +T++ +++  +   I    F +T F +++              V+P     D   G  L++ F+  + G  LKV VP+ F   D+CPGL+KGG LN +R +++   P++ +P  +  D+  L+I + + +  I +     L++ + +  I  IVP
Sbjct:    6 TLAATVRGGTGKGAARSIRREGRIPGVIY------GGGDAPEP-----ITLDYRELNKL---IYAGHFLTTIFDIEVEGAKQR--------VVPRDYQLDPVKGQPLHVDFLRLKPGATLKVSVPIHFINADICPGLKKGGTLNIVRHAIELKVPADAMPDVLTADLHALEIAESMHVSAITLPEGCSLVATDRDFTIATIVP 186
[Close]
BLAST of rna-XM_004509094.3 vs. UniProtKB/Swiss-Prot
Match: sp|B8EK41|RL25_METSB (Large ribosomal subunit protein bL25 OS=Methylocella silvestris (strain DSM 15510 / CIP 108128 / LMG 27833 / NCIMB 13906 / BL2) OX=395965 GN=rplY PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.543e-14
Identity = 55/212 (25.94%), Postives = 98/212 (46.23%), Query Frame = 0 
Query:   32 TIQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQAPV 243
            T+ A  R  TG   A   R +GRIP V++         D         +T++ +++  +   I    F +T F + + AG+          V+P     D      L++ F+  + G  LKV+VPV F  ++ CPG++KGG +N +R S++   P++ IP  I  D+ +L+I D + +  + +    +   +  +  I  I P  +  + PV
Sbjct:    6 TLAAAARHGTGKGAARSVRREGRIPGVIY------GGGDPAEP-----ITLDYRELNKL---IYAGHFLTTLFEIDV-AGTKQR-------VIPRDYQLDPIKDLPLHVDFLRLKPGASLKVEVPVHFLNQETCPGVKKGGSVNIVRHSIELRVPADDIPEAITADLGELEINDSLHLTALALPQGCRPTQRERDFTIVTITPPLVVAETPV 195
[Close]
BLAST of rna-XM_004509094.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q2GHW3|RL25_EHRCR (Large ribosomal subunit protein bL25 OS=Ehrlichia chaffeensis (strain ATCC CRL-10679 / Arkansas) OX=205920 GN=rplY PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.680e-14
Identity = 58/215 (26.98%), Postives = 96/215 (44.65%), Query Frame = 0 
Query:   33 IQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGT------VLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQA 241
            I A  R+  G+  +   R+ G IPAV++      K  DS S S                         +  F  + R+ + STHL+E         VL   + +   +  I ++ F + + GTE+K++VP++F  E  C G+++GGVLN +  +L   C  + I   IE+D+S L     I + D+++ P + +  K  N  I  I   S   +A
Sbjct:    9 INASLRKNVGTGPSRALRLSGEIPAVIY-----GKGRDSLSIS-----------------------LSNREFVSKYRSAALSTHLIELEIDNKKEYVLMRDVQKHPVTDRIQHVDFQFIDYGTEIKIEVPLIFTNEQKCIGIKRGGVLNILHRTLSIKCSPKAILQNIEIDLSGLTTGHSIHVSDLKLPPEVNVTMKEHNPAIVTISSASTEKEA 195
[Close]
BLAST of rna-XM_004509094.3 vs. UniProtKB/Swiss-Prot
Match: sp|C0R595|RL25_WOLWR (Large ribosomal subunit protein bL25 OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) OX=66084 GN=rplY PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.810e-14
Identity = 60/223 (26.91%), Postives = 103/223 (46.19%), Query Frame = 0 
Query:   32 TIQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLE--------TGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLS-KNENMPICKIVPTSLGNQAPVAE 245
            TI A  R+ T +K     R +G IP +++ +   + N           LT+  K+                 F  Q ++GS S HL+E           V  I++H  +++  + ++ F + + G+E+K+D+P+ F  E   PG++ GGVLN +  S+   C  + IP  IEVD+S   I   I + D+++   +K ++ + EN  I  I       + P AE
Sbjct:    8 TINAELRDITKTKAMHSLRKKGNIPGIIYGKGHDNVN-----------LTLSAKE-----------------FTKQYKSGSLSAHLIELNISGKKEYALVRDIQLHVVKDT--VQHVDFQFVDKGSEIKIDIPLSFVNESKAPGIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEGVKFVAHEEENFTIVTISAADSDVEEPQAE 200
[Close]
BLAST of rna-XM_004509094.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q73II9|RL25_WOLPM (Large ribosomal subunit protein bL25 OS=Wolbachia pipientis wMel OX=163164 GN=rplY PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.810e-14
Identity = 60/223 (26.91%), Postives = 103/223 (46.19%), Query Frame = 0 
Query:   32 TIQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLE--------TGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLS-KNENMPICKIVPTSLGNQAPVAE 245
            TI A  R+ T +K     R +G IP +++ +   + N           LT+  K+                 F  Q ++GS S HL+E           V  I++H  +++  + ++ F + + G+E+K+D+P+ F  E   PG++ GGVLN +  S+   C  + IP  IEVD+S   I   I + D+++   +K ++ + EN  I  I       + P AE
Sbjct:    8 TINAELRDITKTKAMHSLRKKGNIPGIIYGKGHDNVN-----------LTLSAKE-----------------FTKQYKSGSLSAHLIELNISGKKEYALVRDIQLHVVKDT--VQHVDFQFVDKGSEIKIDIPLSFVNESKAPGIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEGVKFVAHEEENFTIVTISAADSDVEEPQAE 200
[Close]
BLAST of rna-XM_004509094.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q7NNL2|RL25_GLOVI (Large ribosomal subunit protein bL25 OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=rplY PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.797e-14
Identity = 51/201 (25.37%), Postives = 100/201 (49.75%), Query Frame = 0 
Query:   38 RECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLG 238
            +  TG++  A  R +GRIPAV++              ++   L +E++  + +L  + +    +T  PL++  G        +G VL  ++  D   G +L+L F        + +D+P+VF GE V   +  GG+L K+ T L    P   +P  IEVDIS + + D ++++D+ + P +++++   ++ +  + P+  G
Sbjct:    9 QRATGAQPRAM-RREGRIPAVLY----------GHRGTQSLALELEQRTAEDLLKRVTI---NNTILPLKVERGW-------SGDVLLREVQHDAVGGKLLHLSFFAVAGHGSITLDLPLVFTGEAVGVKMD-GGLLEKVLTQLTVNTPPTDVPEAIEVDISTMQVGDMLYVKDLVLPPGIEVVN-TPDLVVAHLTPSPTG 186
[Close]
BLAST of rna-XM_004509094.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q5P9A5|RL25_ANAMM (Large ribosomal subunit protein bL25 OS=Anaplasma marginale (strain St. Maries) OX=234826 GN=rplY PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.604e-14
Identity = 65/216 (30.09%), Postives = 100/216 (46.30%), Query Frame = 0 
Query:   28 SHYHTIQ--AIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQA 241
            SH  TI+  A  R   G+  A   R  G IPAVV+      KN D+ + S  H   ++K +         +P F S    L I    G          L  +I +   SG + ++ F + + G E+KV+VP+VF  E  C G++ GG LN +  SL   C  + IP  +EVD+  L I   I + D+ +  ++++  K EN  I  +  T+   +A
Sbjct:    2 SHGDTIRVDASVRAKCGTGSARALRAAGLIPAVVY-----GKNRDAVNISLSHADFLKKCRT--------LPIF-SQLIKLCI---DGKEEF-----ALTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLGGALNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVIASVSATAAVEEA 195
[Close]
BLAST of rna-XM_004509094.3 vs. UniProtKB/Swiss-Prot
Match: sp|B9KHC7|RL25_ANAMF (Large ribosomal subunit protein bL25 OS=Anaplasma marginale (strain Florida) OX=320483 GN=rplY PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.276e-13
Identity = 64/216 (29.63%), Postives = 100/216 (46.30%), Query Frame = 0 
Query:   28 SHYHTIQ--AIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQA 241
            SH  TI+  A  R   G+  A   R  G IPAVV+      KN D+ + S  H   ++K +         +P F S    L I    G          L  +I +   SG + ++ F + + G E+KV+VP+VF  E  C G++ GG LN +  SL   C  + IP  +EVD+  L I   I + D+ +  ++++  K EN  +  +  T+   +A
Sbjct:    2 SHGDTIRVDASVRAKCGTGSARALRAAGLIPAVVY-----GKNRDAVNISLSHADFLKKCRT--------LPIF-SQLIKLCI---DGKEEF-----ALTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLGGALNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVVASVSATAAVEEA 195
[Close]
BLAST of rna-XM_004509094.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q5HC84|RL25_EHRRW (Large ribosomal subunit protein bL25 OS=Ehrlichia ruminantium (strain Welgevonden) OX=254945 GN=rplY PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.409e-13
Identity = 47/145 (32.41%), Postives = 74/145 (51.03%), Query Frame = 0 
Query:   98 FFCSTRFPLQIRAGSGSTHL--LETGT----VLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTS 236
            +     F  + R+ + STHL  LE G     VL   I +   +  I ++ F + + GTE+K++VP+VF  E  C G++KGGVLN +  +L   C    I   IEVD++ L I   I + D+ +   + ++ K  N  +  I  TS
Sbjct:   46 YLSDREFLSKYRSAALSTHLIELEIGEKKEYVLMRDIQKHPVTDRIQHVDFQFIDHGTEIKIEVPLVFVNEQRCVGVKKGGVLNILHRTLHIKCLPNAILQSIEVDLANLTIGHSIHVSDLNLPSEVTVVMKEHNPTLVTISGTS 190
[Close]
BLAST of rna-XM_004509094.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YSD5|A0A1S2YSD5_CICAR (Uncharacterized protein LOC101506355 OS=Cicer arietinum OX=3827 GN=LOC101506355 PE=4 SV=1)

HSP 1 Score: 507.294 bits (1305), Expect = 0.000e+0
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0 
Query:    1 MAQWSRSAAGHLRTLEANRQYLSALRRSHYHTIQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQAPVAE 245
            MAQWSRSAAGHLRTLEANRQYLSALRRSHYHTIQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQAPVAE
Sbjct:    1 MAQWSRSAAGHLRTLEANRQYLSALRRSHYHTIQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQAPVAE 245
[Close]
BLAST of rna-XM_004509094.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YSE6|A0A1S2YSE6_CICAR (Uncharacterized protein LOC101511175 OS=Cicer arietinum OX=3827 GN=LOC101511175 PE=4 SV=1)

HSP 1 Score: 495.738 bits (1275), Expect = 4.365e-177
Identity = 241/245 (98.37%), Postives = 243/245 (99.18%), Query Frame = 0 
Query:    1 MAQWSRSAAGHLRTLEANRQYLSALRRSHYHTIQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQAPVAE 245
            MA W RSAAGHLRTLEANRQYLSALRRSHYHTIQAIPRECTGSKVAARDRMQGRIPAVVFFQ+LLDKNSD+RSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQAPVAE
Sbjct:    1 MAHW-RSAAGHLRTLEANRQYLSALRRSHYHTIQAIPRECTGSKVAARDRMQGRIPAVVFFQSLLDKNSDTRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQAPVAE 244
[Close]
BLAST of rna-XM_004509094.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YSF4|A0A1S2YSF4_CICAR (Uncharacterized protein LOC101511817 OS=Cicer arietinum OX=3827 GN=LOC101511817 PE=4 SV=1)

HSP 1 Score: 494.967 bits (1273), Expect = 1.005e-176
Identity = 241/245 (98.37%), Postives = 242/245 (98.78%), Query Frame = 0 
Query:    1 MAQWSRSAAGHLRTLEANRQYLSALRRSHYHTIQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQAPVAE 245
            MA W RSAAGHLRTLEANRQYLSALRRSHYHTIQAIPRECTG KVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIR+SLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQAPVAE
Sbjct:    1 MAHW-RSAAGHLRTLEANRQYLSALRRSHYHTIQAIPRECTGRKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRSSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQAPVAE 244
[Close]
BLAST of rna-XM_004509094.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4XG75|A0A9D4XG75_PEA (Ribosomal protein L25 beta domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_042694 PE=4 SV=1)

HSP 1 Score: 442.195 bits (1136), Expect = 1.074e-155
Identity = 215/246 (87.40%), Postives = 226/246 (91.87%), Query Frame = 0 
Query:    1 MAQWSRSAAGHLRTLEAN-RQYLSALRRSHYHTIQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQAPVAE 245
            MAQW RSAAGHLR+++AN    LS+LR SHYHTIQAIPRE TG+KVAARDRMQGRIPAVVFFQNLLDK  DSRSTSRKHLLTVEKKQIKAVLN IE PFFCSTRFPLQIRAGSGSTHLLE+GTVLPIKIH+D+ESGNILNLVFVWAEDGT LKVDVPVVFKGED CPGLQKGG+LNKIR SL YLCPSEHIPSKIEVDIS LDIED+IFMRDIEVHPSLKLLSKNENMPICKIV TS+GNQ P  E
Sbjct:    1 MAQWWRSAAGHLRSVKANCTSSLSSLRCSHYHTIQAIPRESTGNKVAARDRMQGRIPAVVFFQNLLDKTPDSRSTSRKHLLTVEKKQIKAVLNSIEAPFFCSTRFPLQIRAGSGSTHLLESGTVLPIKIHKDKESGNILNLVFVWAEDGTNLKVDVPVVFKGEDACPGLQKGGILNKIRPSLTYLCPSEHIPSKIEVDISNLDIEDRIFMRDIEVHPSLKLLSKNENMPICKIVSTSVGNQEPGVE 246
[Close]
BLAST of rna-XM_004509094.3 vs. UniProtKB/TrEMBL
Match: tr|G7LGD1|G7LGD1_MEDTR (50S ribosomal protein L25, putative OS=Medicago truncatula OX=3880 GN=11419020 PE=4 SV=1)

HSP 1 Score: 424.476 bits (1090), Expect = 1.353e-148
Identity = 205/240 (85.42%), Postives = 219/240 (91.25%), Query Frame = 0 
Query:    1 MAQWSRSAAGHLRTLEANRQYLSALRRSHYHTIQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQ 240
            MAQW RSAA HLR+ E N    SALRR+HYHTIQAIPRE TGS+VAARDR QGRIPAVVFFQ+LL+K+ ++RSTSRK LLTVEK+QIKAVLN IE PFFCSTRFPLQIRAGSGSTHLLE+GTVLPIKIHRDEESGNILNLVFVWAEDG  LKVDVPVV KGEDVCPGL+KGG LNKIRTSL+YL PSEHIPSKIEVDIS LDIED+IFMRDIEVHPSLKLL+KNENMPICKIVPTSLG Q
Sbjct:    1 MAQWWRSAASHLRSTEVNLFSSSALRRNHYHTIQAIPREITGSRVAARDRKQGRIPAVVFFQDLLEKSPEARSTSRKQLLTVEKRQIKAVLNSIEAPFFCSTRFPLQIRAGSGSTHLLESGTVLPIKIHRDEESGNILNLVFVWAEDGMNLKVDVPVVIKGEDVCPGLKKGGFLNKIRTSLRYLGPSEHIPSKIEVDISNLDIEDRIFMRDIEVHPSLKLLNKNENMPICKIVPTSLGKQ 240
[Close]
BLAST of rna-XM_004509094.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8KY66|A0A8B8KY66_ABRPR (Uncharacterized protein LOC113858809 isoform X1 OS=Abrus precatorius OX=3816 GN=LOC113858809 PE=4 SV=1)

HSP 1 Score: 422.935 bits (1086), Expect = 3.530e-148
Identity = 197/245 (80.41%), Postives = 218/245 (88.98%), Query Frame = 0 
Query:    1 MAQWSRSAAGHLRTLEANRQYLSALRRSHYHTIQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQAPVAE 245
            M QW RSA GHLR +  +R   S  R SHYHTIQAIPREC+GS+V+ARDRMQGRIP VVFFQNLL+KN ++RS S+KHLLTVEKKQIKA+ N +E PFFCSTRFPLQIRAGSGS+HLLE+GTVLPIKIHRDEESG ILN+VFVWAEDG +LKVDVP+VF+GED CPGLQKGG+LNKIRTSLKY CPSEHIPSKI VD+S LDIED+IF RDIEVHPSLKLLSKNENMPICKIVPTSLGN+ PV E
Sbjct:    2 MVQWWRSAGGHLRRVGESRWSSSGFRCSHYHTIQAIPRECSGSRVSARDRMQGRIPVVVFFQNLLEKNPEARSASKKHLLTVEKKQIKAIFNSVEAPFFCSTRFPLQIRAGSGSSHLLESGTVLPIKIHRDEESGQILNMVFVWAEDGMDLKVDVPIVFRGEDTCPGLQKGGILNKIRTSLKYCCPSEHIPSKIVVDVSNLDIEDRIFTRDIEVHPSLKLLSKNENMPICKIVPTSLGNKEPVCE 246
[Close]
BLAST of rna-XM_004509094.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3R4X2|A0A0S3R4X2_PHAAN (Ribosomal protein L25 beta domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G343500 PE=4 SV=1)

HSP 1 Score: 420.624 bits (1080), Expect = 2.588e-147
Identity = 197/245 (80.41%), Postives = 223/245 (91.02%), Query Frame = 0 
Query:    1 MAQWSRSAAGHLRTLEANRQYLSALRRSHYHTIQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQAPVAE 245
            MAQW RSAAGH RT+ A+R   SA R SHYHTIQAIPRECTGSKV+ARDR+QGRIPAV+FFQNLL+KN D+R+ S+K+LLTVEKKQIKA+L+ +  P FCSTRFPLQIRAGSGS+HL+E+GTVLP+KIHRDEESG ILNLVFVWAEDG +LKVDVPV+FKGEDVCPG+QKGG+LNKIR SLKYL PSEHIPSKI VD+S LDIED+IFMRDIEVHPSLKLLSKNENMPICK+VPTSLGN+ P+ E
Sbjct:    1 MAQWWRSAAGHYRTMAASRCSSSAFRCSHYHTIQAIPRECTGSKVSARDRVQGRIPAVLFFQNLLEKNPDNRTESKKYLLTVEKKQIKAILDSVHAPTFCSTRFPLQIRAGSGSSHLVESGTVLPLKIHRDEESGKILNLVFVWAEDGMKLKVDVPVIFKGEDVCPGIQKGGILNKIRPSLKYLGPSEHIPSKIVVDVSNLDIEDRIFMRDIEVHPSLKLLSKNENMPICKVVPTSLGNREPIVE 245
[Close]
BLAST of rna-XM_004509094.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TG22|A0A0L9TG22_PHAAN (Ribosomal protein L25 beta domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0034710 PE=4 SV=1)

HSP 1 Score: 420.624 bits (1080), Expect = 2.588e-147
Identity = 197/245 (80.41%), Postives = 223/245 (91.02%), Query Frame = 0 
Query:    1 MAQWSRSAAGHLRTLEANRQYLSALRRSHYHTIQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQAPVAE 245
            MAQW RSAAGH RT+ A+R   SA R SHYHTIQAIPRECTGSKV+ARDR+QGRIPAV+FFQNLL+KN D+R+ S+K+LLTVEKKQIKA+L+ +  P FCSTRFPLQIRAGSGS+HL+E+GTVLP+KIHRDEESG ILNLVFVWAEDG +LKVDVPV+FKGEDVCPG+QKGG+LNKIR SLKYL PSEHIPSKI VD+S LDIED+IFMRDIEVHPSLKLLSKNENMPICK+VPTSLGN+ P+ E
Sbjct:    1 MAQWWRSAAGHYRTMAASRCSSSAFRCSHYHTIQAIPRECTGSKVSARDRVQGRIPAVLFFQNLLEKNPDNRTESKKYLLTVEKKQIKAILDSVHAPTFCSTRFPLQIRAGSGSSHLVESGTVLPLKIHRDEESGKILNLVFVWAEDGMKLKVDVPVIFKGEDVCPGIQKGGILNKIRPSLKYLGPSEHIPSKIVVDVSNLDIEDRIFMRDIEVHPSLKLLSKNENMPICKVVPTSLGNREPIVE 245
[Close]
BLAST of rna-XM_004509094.3 vs. UniProtKB/TrEMBL
Match: tr|I1K1R5|I1K1R5_SOYBN (Ribosomal protein L25 beta domain-containing protein OS=Glycine max OX=3847 GN=100802599 PE=4 SV=1)

HSP 1 Score: 419.853 bits (1078), Expect = 5.655e-147
Identity = 197/242 (81.40%), Postives = 219/242 (90.50%), Query Frame = 0 
Query:    2 AQWSRSAAGHLRTLEANRQYLSALRRSHYHTIQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQAPV 243
            AQW RSAAGHLRT+ A R  LS  +RS YHTIQAIPREC+GSKV+ARDR QGRIP VVF QNLL+KN D+RS S+KHLLTVEKKQIKA+L+  + PFFCSTRFPLQIRAGSGS+HLLE+GTVLPIKIHRDEESG ILNLVFVWAEDG +LKVDVPVVF+GED CPG+QKGG+LNKIR SLK+LCPSEHIPSKI VD+S LDIED+IFMRDIEVHPSLKLLSKNE+MPICKIVPTSLGN+ P+
Sbjct:    3 AQWWRSAAGHLRTVAAGRGSLSGFQRSTYHTIQAIPRECSGSKVSARDRTQGRIPCVVFLQNLLEKNPDARSESKKHLLTVEKKQIKAILDSADAPFFCSTRFPLQIRAGSGSSHLLESGTVLPIKIHRDEESGKILNLVFVWAEDGMKLKVDVPVVFEGEDACPGVQKGGILNKIRPSLKFLCPSEHIPSKIVVDVSNLDIEDRIFMRDIEVHPSLKLLSKNESMPICKIVPTSLGNKEPI 244
[Close]
BLAST of rna-XM_004509094.3 vs. UniProtKB/TrEMBL
Match: tr|V7CF98|V7CF98_PHAVU (Ribosomal protein L25 beta domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G246600g PE=4 SV=1)

HSP 1 Score: 417.927 bits (1073), Expect = 3.084e-146
Identity = 194/245 (79.18%), Postives = 222/245 (90.61%), Query Frame = 0 
Query:    1 MAQWSRSAAGHLRTLEANRQYLSALRRSHYHTIQAIPRECTGSKVAARDRMQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFCSTRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTELKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISKLDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQAPVAE 245
            MAQW RSAAGHL+T+ A+R   S  RR+HYHTIQAIPRECTGSKV+ARDRMQGRIPAV+FFQ+LL+KN D RS S+KHLLTVEKKQIKA+L+ ++ P FCSTRFPLQIRAGSGS+HL+E+GTVLPIKIHRD+ESG ILNLVFVWAEDG +LKVDVPV+FKGEDVCPG+QKGG+LNKIR SLKYL PSEHIPS + VD+S LDIED+IFMRDIEVHPSLKL+SKNENMPICK+VPT LGN+ P+ E
Sbjct:    1 MAQWWRSAAGHLQTVAASRCSSSVFRRNHYHTIQAIPRECTGSKVSARDRMQGRIPAVLFFQSLLEKNPDGRSESKKHLLTVEKKQIKAILDSVDAPSFCSTRFPLQIRAGSGSSHLVESGTVLPIKIHRDKESGQILNLVFVWAEDGMKLKVDVPVIFKGEDVCPGIQKGGILNKIRPSLKYLGPSEHIPSNVVVDVSNLDIEDRIFMRDIEVHPSLKLISKNENMPICKVVPTCLGNREPIVE 245
The following BLAST results are available for this feature:
BLAST of rna-XM_004509094.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 3
Match NameE-valueIdentityDescription
|3.489e-10663.37Symbols: no symbol available | no full name availa... [more]
|1.832e-5240.45Symbols: no symbol available | no full name availa... [more]
|9.978e-5139.06Symbols: no symbol available | no full name availa... [more]
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BLAST of rna-XM_004509094.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q3YT12|RL25_EHRCJ1.581e-1730.49Large ribosomal subunit protein bL25 OS=Ehrlichia ... [more]
sp|B2IG64|RL25_BEII96.414e-1626.11Large ribosomal subunit protein bL25 OS=Beijerinck... [more]
sp|B8EK41|RL25_METSB1.543e-1425.94Large ribosomal subunit protein bL25 OS=Methylocel... [more]
sp|Q2GHW3|RL25_EHRCR1.680e-1426.98Large ribosomal subunit protein bL25 OS=Ehrlichia ... [more]
sp|C0R595|RL25_WOLWR5.810e-1426.91Large ribosomal subunit protein bL25 OS=Wolbachia ... [more]
sp|Q73II9|RL25_WOLPM5.810e-1426.91Large ribosomal subunit protein bL25 OS=Wolbachia ... [more]
sp|Q7NNL2|RL25_GLOVI6.797e-1425.37Large ribosomal subunit protein bL25 OS=Gloeobacte... [more]
sp|Q5P9A5|RL25_ANAMM8.604e-1430.09Large ribosomal subunit protein bL25 OS=Anaplasma ... [more]
sp|B9KHC7|RL25_ANAMF1.276e-1329.63Large ribosomal subunit protein bL25 OS=Anaplasma ... [more]
sp|Q5HC84|RL25_EHRRW5.409e-1332.41Large ribosomal subunit protein bL25 OS=Ehrlichia ... [more]
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BLAST of rna-XM_004509094.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2YSD5|A0A1S2YSD5_CICAR0.000e+0100.00Uncharacterized protein LOC101506355 OS=Cicer arie... [more]
tr|A0A1S2YSE6|A0A1S2YSE6_CICAR4.365e-17798.37Uncharacterized protein LOC101511175 OS=Cicer arie... [more]
tr|A0A1S2YSF4|A0A1S2YSF4_CICAR1.005e-17698.37Uncharacterized protein LOC101511817 OS=Cicer arie... [more]
tr|A0A9D4XG75|A0A9D4XG75_PEA1.074e-15587.40Ribosomal protein L25 beta domain-containing prote... [more]
tr|G7LGD1|G7LGD1_MEDTR1.353e-14885.4250S ribosomal protein L25, putative OS=Medicago tr... [more]
tr|A0A8B8KY66|A0A8B8KY66_ABRPR3.530e-14880.41Uncharacterized protein LOC113858809 isoform X1 OS... [more]
tr|A0A0S3R4X2|A0A0S3R4X2_PHAAN2.588e-14780.41Ribosomal protein L25 beta domain-containing prote... [more]
tr|A0A0L9TG22|A0A0L9TG22_PHAAN2.588e-14780.41Ribosomal protein L25 beta domain-containing prote... [more]
tr|I1K1R5|I1K1R5_SOYBN5.655e-14781.40Ribosomal protein L25 beta domain-containing prote... [more]
tr|V7CF98|V7CF98_PHAVU3.084e-14679.18Ribosomal protein L25 beta domain-containing prote... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:2.170.120.20:FF:000006coord: 148..235
e-value: 8.4E-45
score: 152.4
NoneNo IPR availablePANTHERPTHR33284RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEINcoord: 9..236
IPR037121Large ribosomal subunit protein bL25, C-terminalGENE3D2.170.120.20Ribosomal protein L25, beta domaincoord: 148..227
e-value: 1.2E-20
score: 75.5
IPR020057Large ribosomal subunit protein bL25, beta domainPFAMPF14693Ribosomal_TL5_Ccoord: 151..235
e-value: 2.2E-20
score: 84.1
IPR029751Large ribosomal subunit protein bL25, L25 domainCDDcd00495Ribosomal_L25_TL5_CTCcoord: 32..94
e-value: 6.27711E-7
score: 44.3834
IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilySUPERFAMILY50715Ribosomal protein L25-likecoord: 37..234

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_004509094.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004509094.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004509094.3; organism=Cicer arietinum; type=mRNA; length=738bp
ATGGCACAGTGGTCGCGCTCCGCCGCCGGCCACCTCCGAACATTGGAGGC
AAACCGTCAATACTTATCAGCACTCCGCCGTAGCCATTACCACACAATCC
AAGCAATTCCGAGAGAATGTACTGGAAGCAAAGTTGCCGCCAGAGATAGA
ATGCAAGGTCGAATACCTGCCGTCGTTTTCTTCCAGAACCTTCTCGACAA
AAACTCCGACTCTCGATCCACGTCGAGGAAGCATTTGCTCACCGTCGAGA
AGAAACAGATTAAAGCCGTACTCAATGAAATCGAAGTTCCTTTCTTCTGC
TCCACACGTTTTCCGCTACAAATCCGTGCTGGATCCGGATCCACTCATTT
GCTCGAAACTGGAACTGTTCTACCTATCAAGATTCATAGGGATGAAGAGA
GTGGGAATATTTTGAATTTAGTGTTTGTTTGGGCAGAAGACGGTACTGAA
TTGAAGGTTGATGTGCCTGTTGTTTTCAAAGGGGAAGATGTTTGTCCTGG
TCTTCAGAAAGGTGGTGTTTTGAATAAGATCAGAACTAGTCTAAAATATC
TTTGTCCATCTGAGCACATTCCTTCAAAAATTGAGGTGGATATCAGCAAA
TTAGATATTGAAGATAAGATATTCATGCGTGATATTGAGGTTCATCCATC
CTTGAAACTTCTGAGTAAGAACGAAAACATGCCGATTTGTAAAATAGTTC
CAACAAGTTTGGGAAACCAAGCACCAGTTGCTGAGTGA
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protein sequence of rna-XM_004509094.3_CaCDCfrontier-NCBI_v1

>rna-XM_004509094.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004509094.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004509094.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=245bp
MAQWSRSAAGHLRTLEANRQYLSALRRSHYHTIQAIPRECTGSKVAARDR
MQGRIPAVVFFQNLLDKNSDSRSTSRKHLLTVEKKQIKAVLNEIEVPFFC
STRFPLQIRAGSGSTHLLETGTVLPIKIHRDEESGNILNLVFVWAEDGTE
LKVDVPVVFKGEDVCPGLQKGGVLNKIRTSLKYLCPSEHIPSKIEVDISK
LDIEDKIFMRDIEVHPSLKLLSKNENMPICKIVPTSLGNQAPVAE
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mRNA from alignment at chr7:12463109..12464530+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_004509094.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004509094.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004509094.3; organism=Cicer arietinum; type=mRNA; length=1422bp; location=Sequence derived from: chr7:12463109..12464530+ (Cicer arietinum
AACGCTCAGGCCCAAGAAAAgcccaaaaacctaaaaccctgATCTCAAGA
CCGCATTGCAAAGAGAGAGGACCGCATGGCACAGTGGTCGCGCTCCGCCG
CCGGCCACCTCCGAACATTGGAGGCAAACCGTCAATACTTATCAGCACTC
CGCCGTAGCCATTACCACACAATCCAAGCAATTCCGAGAGAATGTACTGG
AAGCAAAGTTGCCGCCAGAGATAGAATGCAAGGTCGAATACCTGCCGTCG
TTTTCTTCCAGAACCTTCTCGACAAAAACTCCGACTCTCGATCCACGTCG
AGGAAGCATTTGCTCACCGTCGAGAAGAAACAGATTAAAGCCGTACTCAA
TGAAATCGAAGTTCCTTTCTTCTGCTCCACACGTTTTCCGCTACAAATCC
GTGCTGGATCCGGATCCACTCATTTGCTCGAAACTGGAACTGTTCTACCT
ATCAAGGTTTACTTTCTTTTTTGTctgttacatattttttattttattta
aaatttgaaattgtgaTTTTAGATTTTGTATATTTGTGGTGTGTAGATTC
ATAGGGATGAAGAGAGTgggaatattttgaatttagtgTTTGTTTGGGCA
GAAGACGGTACTGAATTGAAGGTTGATGTGCCTGTTGTTTTCAAAGGGGA
AGATGTTTGTCCTGGTCTTCAGAAAGGtaattccatttttattttgaatt
tgttgaTCAAATATGTAAACTTAAAGTAACTCTTTCTATGGAGCTTTCAA
ACCATCAATATTAGTTTAACTCCTTCGTGATGTTTTCTTGTTATATAGAA
GGACTGCggttagatttatttattttggtagGGATATTGGGTATTTAATG
TTGTTCTACTGCTAATACAATCTAAATATATTACAGGTGGTGTTTTGAAT
AAGATCAGAACTAGTCTAAAATATCTTTGTCCATCTGAGCACATTCCTTC
AAAAATTGAGGTGGATATCAGCAAATTAGATATTGAAGATAAGATATTCA
TGCGTGATATTGAGGTTCATCCATCCTTGAAACTTCTGAGTAAGAACGAA
AACATGCCGATTTGTAAAATAGTTCCAACAAGTTTGGGAAACCAAGCACC
AGTTGCTGAGTGATCACTGAAACAACATATGAGATTCGACAAACTGCATT
CATCGAGAGAAATGCAGAAGCTTCCAAATAAACAGGATTAACTCCCTGAT
TTGATGAGATGTTGGCAGTGACAAGTACAAGCACCATAGATGTTAGAACT
ACTTTGTATTAGACTTCATTGATGTTTCAGTCTAGGTGGATTGATGATTT
CTGTTCAATCTTTGGCGGCACTTACAAGCTATTATTATCTATAGACTTGT
TGGAACCTtagcttttattatttttaacaattaaaaatgaataaaattta
aatacagaTTATTCGAACAGCA
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Coding sequence (CDS) from alignment at chr7:12463109..12464530+

>rna-XM_004509094.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004509094.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004509094.3; organism=Cicer arietinum; type=CDS; length=738bp; location=Sequence derived from: chr7:12463109..12464530+ (Cicer arietinum
ATGGCACAGTGGTCGCGCTCCGCCGCCGGCCACCTCCGAACATTGGAGGC
AAACCGTCAATACTTATCAGCACTCCGCCGTAGCCATTACCACACAATCC
AAGCAATTCCGAGAGAATGTACTGGAAGCAAAGTTGCCGCCAGAGATAGA
ATGCAAGGTCGAATACCTGCCGTCGTTTTCTTCCAGAACCTTCTCGACAA
AAACTCCGACTCTCGATCCACGTCGAGGAAGCATTTGCTCACCGTCGAGA
AGAAACAGATTAAAGCCGTACTCAATGAAATCGAAGTTCCTTTCTTCTGC
TCCACACGTTTTCCGCTACAAATCCGTGCTGGATCCGGATCCACTCATTT
GCTCGAAACTGGAACTGTTCTACCTATCAAGATTCATAGGGATGAAGAGA
GTgggaatattttgaatttagtgTTTGTTTGGGCAGAAGACGGTACTGAA
TTGAAGGTTGATGTGCCTGTTGTTTTCAAAGGGGAAGATGTTTGTCCTGG
TCTTCAGAAAGGTGGTGTTTTGAATAAGATCAGAACTAGTCTAAAATATC
TTTGTCCATCTGAGCACATTCCTTCAAAAATTGAGGTGGATATCAGCAAA
TTAGATATTGAAGATAAGATATTCATGCGTGATATTGAGGTTCATCCATC
CTTGAAACTTCTGAGTAAGAACGAAAACATGCCGATTTGTAAAATAGTTC
CAACAAGTTTGGGAAACCAAGCACCAGTTGCTGAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR037121Ribosomal_bL25_C
IPR020057Ribosomal_bL25_b-dom
IPR029751Ribosomal_L25_dom
IPR011035Ribosomal_bL25/Gln-tRNA_synth
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation