rna-XM_012714088.1
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Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_012714088.1 vs. Araport11
Match: | (Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVERSE LENGTH=257) HSP 1 Score: 113.62 bits (283), Expect = 9.531e-31 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 0
Query: 10 AAKYARNGKVLVASSILLFILVLIIVLFRTYVYL--------------CHRYHHRRRQRPLTTTFNEQKLDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESHIEWSDISGFEPGEGCSYFP 159
+++Y+ NGK+++AS I+LF+ V++I+ F +Y H + P ++ + LDP++L+ +P F YS L +C+VCLSEF + DE R LP C H FH DCIDTW S S+CPLCRA V+P + EP + FP
Sbjct: 19 SSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRSLAAARDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVT-------EPEPVAAVFP 175
BLAST of rna-XM_012714088.1 vs. Araport11
Match: | (Symbols: ATL64 | Arabidopsis T####xicos en Levadura 64 | chr2:19511934-19512617 REVERSE LENGTH=227) HSP 1 Score: 105.916 bits (263), Expect = 4.659e-28 Identity = 72/204 (35.29%), Postives = 103/204 (50.49%), Query Frame = 0
Query: 10 AAKYARNGKVLVASSILLFILVLIIVLFRTYV-------YLCHRYHHRRRQRPLTTTFNEQKLDPSILKSLPSFTYSSS--AARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESHIEWSDISGFE-----PGEGCSYFPEPIGCP------RKQLNLNLSNYRISFETGKEERNFRILA 193
++ YA NGK++++S I+LF+ V++I+ F +Y R R R L+ + +Q LD ++L +P F YSS +C+VCLSEF + DE R LP C H FH DCIDTW S S CPLCRA V+P + + S P EGC EPI +++ SN + E G + R+L+
Sbjct: 19 SSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLRTLSASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPLTFPTEGCER--EPIDLAGIIVDISREVEFEGSNPGLPIENGSKFPGSRVLS 220
BLAST of rna-XM_012714088.1 vs. Araport11
Match: | (Symbols: TL2, ATL2 | TOXICOS EN LEVADURA 2 | chr3:5692880-5693794 FORWARD LENGTH=304) HSP 1 Score: 103.605 bits (257), Expect = 1.882e-26 Identity = 53/149 (35.57%), Postives = 79/149 (53.02%), Query Frame = 0
Query: 13 YARNGKVLVASSILLFILVLIIVLFRTYV-------------------YLCHRYHHRRRQRPLTTTFNEQKLDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESHIE 142
YA +GK+++++ ++LF +V+++V Y + T+ + LDP+++KSLP FT+S + + +CAVCLSEF + + R LPNC H FH DCID W SHS CPLCR+LV + IE
Sbjct: 24 YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPI-ECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIE 171
BLAST of rna-XM_012714088.1 vs. Araport11
Match: | (Symbols: ATL17 | Arabidopsis T####xicos en Levadura 17 | chr4:9052313-9053020 FORWARD LENGTH=235) HSP 1 Score: 93.9745 bits (232), Expect = 1.900e-23 Identity = 42/73 (57.53%), Postives = 54/73 (73.97%), Query Frame = 0
Query: 65 LDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRP 137
L+PSI+KSLP FT+S+ A + +C+VCLSEF D + R +PNC H FH DCID W SHS+CPLCR+L+ P
Sbjct: 52 LNPSIIKSLPIFTFSAVTALFAM-ECSVCLSEFKDNESGRVMPNCKHTFHVDCIDMWFHSHSSCPLCRSLIEP 123
BLAST of rna-XM_012714088.1 vs. Araport11
Match: | (Symbols: ATL47 | Arabidopsis T####xicos en Levadura 47 | chr1:8484879-8485988 REVERSE LENGTH=369) HSP 1 Score: 94.7449 bits (234), Expect = 6.410e-23 Identity = 55/153 (35.95%), Postives = 82/153 (53.59%), Query Frame = 0
Query: 23 SSILLFILVLIIVLFR--TYVYLCHRYHHRRRQRPLTTTFNEQK-------------------------LDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESH-IEWSDIS 147
S I+LFI+VL+ V+F + ++L RY+ ++++ L+++ NE LD +++ +LP F Y + DCAVCL EF + D+ R LPNC+H FH DCIDTWL S+S CPLCR + H E+ D +
Sbjct: 50 SPIILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFSLGHQFEYPDFN 202
BLAST of rna-XM_012714088.1 vs. Araport11
Match: | (Symbols: ATL41 | Arabidopsis T####xicos en Levadura 41 | chr2:17640907-17641617 FORWARD LENGTH=236) HSP 1 Score: 92.0485 bits (227), Expect = 9.081e-23 Identity = 57/159 (35.85%), Postives = 84/159 (52.83%), Query Frame = 0
Query: 5 PDPDLAAKYARNGKVLVASSILLFILVLIIVLFRTYVYLCHRYHHRRRQ--RPLTTTFN------EQKLDPSILKSLPSFTYSSS-AARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESHIEWSDISGFEPGEG 154
P+P + Y N K+++A+ L ++LI+ Y R RRR+ R L F ++ L+P+++ SLP+FT ++ + +CAVCLS + D+ R LPNC H FH DC+DTWL + S CP+CR V P +E EP EG
Sbjct: 20 PNP---STYDLNSKIMLAAVASLSGVILIVFALHLYARFVLR---RRREAFRGLPVIFRHPFEMPKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEP------EPREG 166
BLAST of rna-XM_012714088.1 vs. Araport11
Match: | (Symbols: ATL52 | Arabidopsis T####xicos en Levadura 52 | chr5:5800029-5801117 REVERSE LENGTH=362) HSP 1 Score: 93.2041 bits (230), Expect = 2.295e-22 Identity = 50/127 (39.37%), Postives = 64/127 (50.39%), Query Frame = 0
Query: 26 LLFILVLIIVLFRTYVYL---CHRYHHRRRQRPLTTTFNEQK--------------LDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALV 135
L+ IL ++L Y + CHR+H L N + L+ S++KS+ + Y S DC+VCLSEF + + R LP CNH FH CIDTWL SHSNCPLCRA V
Sbjct: 61 LIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFV 187
BLAST of rna-XM_012714088.1 vs. Araport11
Match: | (Symbols: ATL8 | | chr1:28668915-28669472 FORWARD LENGTH=185) HSP 1 Score: 87.4261 bits (215), Expect = 1.824e-21 Identity = 50/125 (40.00%), Postives = 65/125 (52.00%), Query Frame = 0
Query: 16 NGKVLVASSILLFILVLIIVLFR-TYVYLCHRYHHRRRQ---RPLTTTFNEQKLDPSILKSLPSFTYS-SSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALV 135
N +++ ++LL L II L + R R R P + L +L+SLP TYS S L +CA+CL+EF GDE R LP C H FH CIDTWL SHS+CP CR ++
Sbjct: 25 NSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQIL 149
BLAST of rna-XM_012714088.1 vs. Araport11
Match: | (Symbols: ATL51 | Arabidopsis T####xicos en Levadura 51 | chr3:850391-851461 REVERSE LENGTH=356) HSP 1 Score: 88.5817 bits (218), Expect = 1.003e-20 Identity = 41/83 (49.40%), Postives = 52/83 (62.65%), Query Frame = 0
Query: 65 LDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESHIEWSDIS 147
LD S++KS+ + Y DC+VCLSEF + + R LP CNH FH CIDTWL SHSNCPLCRA + S +E D++
Sbjct: 134 LDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLT 216
BLAST of rna-XM_012714088.1 vs. Araport11
Match: | (Symbols: AtATL80, ATL80 | Arabidopsis T####xicos en Levadura 80 | chr1:7238880-7239473 FORWARD LENGTH=197) HSP 1 Score: 83.1889 bits (204), Expect = 1.076e-19 Identity = 48/126 (38.10%), Postives = 66/126 (52.38%), Query Frame = 0
Query: 19 VLVASSILLFILVLIIVLFRTYVYLCHRYHHRRRQRPLTTTFNEQ--------KLDPSILKSLPSFTYS-SSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALV 135
V++A+ + I VL ++ V+L R R + T + Q L +L+SLP T+S S +CA+CL+EF GDE R LP C H FH CIDTWL SHS+CP CR ++
Sbjct: 32 VILAALLCALICVLGLIAVSRCVWL-RRLAAGNRTVSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQIL 156
BLAST of rna-XM_012714088.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LZJ6|ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.193e-30 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 0
Query: 10 AAKYARNGKVLVASSILLFILVLIIVLFRTYVYL--------------CHRYHHRRRQRPLTTTFNEQKLDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESHIEWSDISGFEPGEGCSYFP 159
+++Y+ NGK+++AS I+LF+ V++I+ F +Y H + P ++ + LDP++L+ +P F YS L +C+VCLSEF + DE R LP C H FH DCIDTW S S+CPLCRA V+P + EP + FP
Sbjct: 19 SSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRSLAAARDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVT-------EPEPVAAVFP 175
BLAST of rna-XM_012714088.1 vs. UniProtKB/Swiss-Prot
Match: sp|O22255|ATL64_ARATH (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 4.491e-27 Identity = 72/204 (35.29%), Postives = 103/204 (50.49%), Query Frame = 0
Query: 10 AAKYARNGKVLVASSILLFILVLIIVLFRTYV-------YLCHRYHHRRRQRPLTTTFNEQKLDPSILKSLPSFTYSSS--AARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESHIEWSDISGFE-----PGEGCSYFPEPIGCP------RKQLNLNLSNYRISFETGKEERNFRILA 193
++ YA NGK++++S I+LF+ V++I+ F +Y R R R L+ + +Q LD ++L +P F YSS +C+VCLSEF + DE R LP C H FH DCIDTW S S CPLCRA V+P + + S P EGC EPI +++ SN + E G + R+L+
Sbjct: 19 SSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLRTLSASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPLTFPTEGCER--EPIDLAGIIVDISREVEFEGSNPGLPIENGSKFPGSRVLS 220
BLAST of rna-XM_012714088.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8L9T5|ATL2_ARATH (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.825e-25 Identity = 53/149 (35.57%), Postives = 79/149 (53.02%), Query Frame = 0
Query: 13 YARNGKVLVASSILLFILVLIIVLFRTYV-------------------YLCHRYHHRRRQRPLTTTFNEQKLDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESHIE 142
YA +GK+++++ ++LF +V+++V Y + T+ + LDP+++KSLP FT+S + + +CAVCLSEF + + R LPNC H FH DCID W SHS CPLCR+LV + IE
Sbjct: 24 YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPI-ECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIE 171
BLAST of rna-XM_012714088.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8GW38|ATL47_ARATH (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.257e-22 Identity = 55/153 (35.95%), Postives = 82/153 (53.59%), Query Frame = 0
Query: 23 SSILLFILVLIIVLFR--TYVYLCHRYHHRRRQRPLTTTFNEQK-------------------------LDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESH-IEWSDIS 147
S I+LFI+VL+ V+F + ++L RY+ ++++ L+++ NE LD +++ +LP F Y + DCAVCL EF + D+ R LPNC+H FH DCIDTWL S+S CPLCR + H E+ D +
Sbjct: 50 SPIILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFSLGHQFEYPDFN 202
BLAST of rna-XM_012714088.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SLC3|ATL41_ARATH (E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 8.781e-22 Identity = 57/159 (35.85%), Postives = 84/159 (52.83%), Query Frame = 0
Query: 5 PDPDLAAKYARNGKVLVASSILLFILVLIIVLFRTYVYLCHRYHHRRRQ--RPLTTTFN------EQKLDPSILKSLPSFTYSSS-AARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESHIEWSDISGFEPGEG 154
P+P + Y N K+++A+ L ++LI+ Y R RRR+ R L F ++ L+P+++ SLP+FT ++ + +CAVCLS + D+ R LPNC H FH DC+DTWL + S CP+CR V P +E EP EG
Sbjct: 20 PNP---STYDLNSKIMLAAVASLSGVILIVFALHLYARFVLR---RRREAFRGLPVIFRHPFEMPKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEP------EPREG 166
BLAST of rna-XM_012714088.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LF64|ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.240e-21 Identity = 50/127 (39.37%), Postives = 64/127 (50.39%), Query Frame = 0
Query: 26 LLFILVLIIVLFRTYVYL---CHRYHHRRRQRPLTTTFNEQK--------------LDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALV 135
L+ IL ++L Y + CHR+H L N + L+ S++KS+ + Y S DC+VCLSEF + + R LP CNH FH CIDTWL SHSNCPLCRA V
Sbjct: 61 LIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFV 187
BLAST of rna-XM_012714088.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8LF65|ATL17_ARATH (RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.275e-20 Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 0
Query: 65 LDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRP 137
L+PSI+KSLP FT+S+ A + +C+VCLSEF D + R +PNC H FH CID W SHS+CPLCR+ + P
Sbjct: 52 LNPSIIKSLPIFTFSAVTALFAM-ECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQIEP 123
BLAST of rna-XM_012714088.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8LC69|ATL8_ARATH (RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.758e-20 Identity = 50/125 (40.00%), Postives = 65/125 (52.00%), Query Frame = 0
Query: 16 NGKVLVASSILLFILVLIIVLFR-TYVYLCHRYHHRRRQ---RPLTTTFNEQKLDPSILKSLPSFTYS-SSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALV 135
N +++ ++LL L II L + R R R P + L +L+SLP TYS S L +CA+CL+EF GDE R LP C H FH CIDTWL SHS+CP CR ++
Sbjct: 25 NSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQIL 149
BLAST of rna-XM_012714088.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SRQ8|ATL51_ARATH (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 9.802e-20 Identity = 41/83 (49.40%), Postives = 52/83 (62.65%), Query Frame = 0
Query: 65 LDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESHIEWSDIS 147
LD S++KS+ + Y DC+VCLSEF + + R LP CNH FH CIDTWL SHSNCPLCRA + S +E D++
Sbjct: 134 LDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLT 216
BLAST of rna-XM_012714088.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LRB7|EL5_ORYSJ (E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5.1 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.334e-19 Identity = 49/146 (33.56%), Postives = 67/146 (45.89%), Query Frame = 0
Query: 18 KVLVASSILLFILVLIIVLFRTYVYLCHRYHHRRRQRPLTTTFNEQK---------------------LDPSILKSLPSFTYSSSAARRTLH----------DCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCR 132
+ A I VLI+ T ++ + + R+R +TTT + +DP +L+SLP YS S A +CAVCL+E DG+E R LP C H FH++C+D WL SHS CPLCR
Sbjct: 31 AAMTAGGIATVAAVLIVFAALTLAFVLLQCYCDERRRAVTTTSTSGRGRRPRPRRRSGSGGDGGTGGGVDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCR 176
BLAST of rna-XM_012714088.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3E193|A0A1S3E193_CICAR (RING-H2 finger protein ATL5 OS=Cicer arietinum OX=3827 GN=LOC101489059 PE=4 SV=1) HSP 1 Score: 426.402 bits (1095), Expect = 5.998e-151 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
Query: 1 MASDPDPDLAAKYARNGKVLVASSILLFILVLIIVLFRTYVYLCHRYHHRRRQRPLTTTFNEQKLDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESHIEWSDISGFEPGEGCSYFPEPIGCPRKQLNLNLSNYRISFETGKEERNFRILAGTGGACKFDMLN 205
MASDPDPDLAAKYARNGKVLVASSILLFILVLIIVLFRTYVYLCHRYHHRRRQRPLTTTFNEQKLDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESHIEWSDISGFEPGEGCSYFPEPIGCPRKQLNLNLSNYRISFETGKEERNFRILAGTGGACKFDMLN
Sbjct: 1 MASDPDPDLAAKYARNGKVLVASSILLFILVLIIVLFRTYVYLCHRYHHRRRQRPLTTTFNEQKLDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESHIEWSDISGFEPGEGCSYFPEPIGCPRKQLNLNLSNYRISFETGKEERNFRILAGTGGACKFDMLN 205
BLAST of rna-XM_012714088.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3DWQ3|A0A1S3DWQ3_CICAR (RING-H2 finger protein ATL5-like OS=Cicer arietinum OX=3827 GN=LOC101488632 PE=4 SV=1) HSP 1 Score: 362.459 bits (929), Expect = 4.753e-126 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
Query: 1 MASDPDPDLAAKYARNGKVLVASSILLFILVLIIVLFRTYVYLCHRYHHRRRQRPLTTTFNEQKLDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESHIEWSDISGFEPGEGCSYFPEPIGCPRKQLNLNLS 174
MASDPDPDLAAKYARNGKVLVASSILLFILVLIIVLFRTYVYLCHRYHHRRRQRPLTTTFNEQKLDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESHIEWSDISGFEPGEGCSYFPEPIGCPRKQLNLNLS
Sbjct: 1 MASDPDPDLAAKYARNGKVLVASSILLFILVLIIVLFRTYVYLCHRYHHRRRQRPLTTTFNEQKLDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESHIEWSDISGFEPGEGCSYFPEPIGCPRKQLNLNLS 174
BLAST of rna-XM_012714088.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072U3V2|A0A072U3V2_MEDTR (Anaphase-promoting complex subunit 11 RING-H2 finger protein OS=Medicago truncatula OX=3880 GN=25499605 PE=4 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.032e-62 Identity = 115/179 (64.25%), Postives = 137/179 (76.54%), Query Frame = 0
Query: 1 MASDPDPDLAAKYARNGKVLVASSILLFILVLIIVLFRTYVYLCHRYHHR--RRQRPLTTTFNEQKLDPSILKSLPSFTYSSS--AARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRP---ESHIEWSDISGF-EPGEGCSYFPEPIGCPRKQLNL 171
M++ DP+L AKYA N KV++ SSILLFIL+LII+LFRTYVY+CH R + TTTF E++LDPS+LKSLP+FTYSSS A RTLHDCAVCLSEF DGDEC TLPNCNHDFHS C++ W ASHSNCPLCRA V+P +S+ E + G EPGEGCS FPEP+ CPRK ++
Sbjct: 1 MSTSTDPNLEAKYALNSKVMIGSSILLFILILIILLFRTYVYICHLRSRRLFSQDSVTTTTFKEERLDPSVLKSLPTFTYSSSSSATGRTLHDCAVCLSEFTDGDECLTLPNCNHDFHSLCVEPWFASHSNCPLCRAPVQPAKVQSYTETCTVLGSGEPGEGCSNFPEPVWCPRKPFSV 179
BLAST of rna-XM_012714088.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3PG28|A0A2K3PG28_TRIPR (RING-H2 finger protein ATL2-like OS=Trifolium pratense OX=57577 GN=L195_g010918 PE=4 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.687e-61 Identity = 112/179 (62.57%), Postives = 134/179 (74.86%), Query Frame = 0
Query: 1 MASDPDPDLAAKYARNGKVLVASSILLFILVLIIVLFRTYVYLCHRYHHRRRQ----RPLTTTFNEQKLDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRP---ESHIEWSDISGF-EPGEGCSYFPEPIGCPRKQLNL 171
MASD + L KYA N KV+V SS+LLFIL++IIVLFRTY+YLCH +R RQ TTTF E+KLDPS+LKS+P+F +S+SA+ RT+ DCAVCLSEF DGD CRTLPNC H FHS CID WL SHSNCPLCR V+P ++H E +SG EPGEGCS F EP+GCPRK ++
Sbjct: 1 MASDQN--LQEKYALNAKVMVGSSVLLFILIIIIVLFRTYIYLCHHRRNRNRQFSQQSLTTTTFKEEKLDPSVLKSIPTFIFSTSASHRTVLDCAVCLSEFTDGDVCRTLPNCKHHFHSQCIDMWLGSHSNCPLCRTPVQPVTVQTHTEPCSVSGLQEPGEGCSSFLEPVGCPRKPFSV 177
BLAST of rna-XM_012714088.1 vs. UniProtKB/TrEMBL
Match: tr|V7CYC1|V7CYC1_PHAVU (RING-type domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G208400g PE=4 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.735e-50 Identity = 93/192 (48.44%), Postives = 123/192 (64.06%), Query Frame = 0
Query: 6 DPDLAAKYARNGKVLVASSILLFILVLIIVLFRTYVYLCHRYHHRRRQRPL-TTTFNEQKLDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPE---SHIEWSDISGFEPGEGCSYFPEP-IGCPRKQLN--LNLSNYRISFETGKEERNFR 190
+PD+ +KYA NGKV+V ++ILLF+L ++I++F TYV C R L TT+ E LDPS++KSLP+F++S+ A R+L DCAVCLSEF DGD+ R LPNCNH FH+DCID W ASHS CPLCR V+P S E + E EGCS P I CPRK L+ + +++ + E+ FR
Sbjct: 80 EPDIESKYAHNGKVMVGTAILLFVLTILIIMFNTYVRFCRRRRRALLSHSLPTTSSAEPCLDPSVIKSLPTFSFSA-AVHRSLQDCAVCLSEFADGDKVRALPNCNHGFHADCIDAWFASHSTCPLCRTPVQPATACSDAEPGSVPVSEADEGCSSSLGPLIACPRKTLDIVIEVADVERGLDPVTEDDGFR 270
BLAST of rna-XM_012714088.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8LD90|A0A8B8LD90_ABRPR (RING-H2 finger protein ATL5-like OS=Abrus precatorius OX=3816 GN=LOC113863763 PE=4 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.068e-46 Identity = 99/184 (53.80%), Postives = 120/184 (65.22%), Query Frame = 0
Query: 6 DPDLAAKYARNGKVLVASSILLFILVLIIVLFRTYVYLCHRYHHRRRQRPLTT--TFNEQKLDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPE---SHIEWSDISGFEPGEG--CSYFPEPIGCPRKQLNLNLSNYRISFET 182
DPD+ +KYA N KV+V ++ILLFI++L+IV Y+ C R R L T +FN L PS+LKSLP+FT+S+ A R LHDCAVCLSEF DGDE R LPNCNH FHS CIDTW SHSNCPLCR LV+P S E +S E GEG S P PIGCPRK L++ + + E+
Sbjct: 4 DPDVESKYAHNAKVMVGTAILLFIIILLIVFLHAYLRFCRRRRRRLPSPSLPTNSSFNHPSLHPSVLKSLPTFTFSA-ATHRALHDCAVCLSEFADGDEGRVLPNCNHAFHSHCIDTWFVSHSNCPLCRTLVQPATACSGAEPGSVSVLEAGEGSCSSSLPAPIGCPRKPLHIIVEQPEVERES 186
BLAST of rna-XM_012714088.1 vs. UniProtKB/TrEMBL
Match: tr|A0A834T9W2|A0A834T9W2_9FABA (RING-type E3 ubiquitin transferase OS=Senna tora OX=362788 GN=G2W53_023643 PE=4 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.509e-46 Identity = 86/173 (49.71%), Postives = 111/173 (64.16%), Query Frame = 0
Query: 4 DPDPDLAAKYARNGKVLVASSILLFILVLIIVLFRTYVYLC---HRYH--HRRRQRPLTTTFNEQKLDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESHIEWSDISGFEPGEGCSYFPEPIGCPRKQLNL 171
D + D K+A NGKV++AS+ILLF++++I++ FRTY Y C HR+H +R L + N + L PS+ LP+F YSS + R LH+CAVCLSEF + +E R LPNCNH FH+ CID W SHSNCPLCRA V P E + GCSY P PIGCP K L++
Sbjct: 2 DMNADSHTKFADNGKVMLASAILLFLILVIVIFFRTYAYSCFRRHRHHPPNRNLLPTLAASNNSKGLHPSLFNLLPTFNYSSHS-HRPLHECAVCLSEFQEDEEGRLLPNCNHGFHTHCIDKWFRSHSNCPLCRAPVAPPKITEAA--------AGCSYLPPPIGCPSKALDV 165
BLAST of rna-XM_012714088.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445FJJ4|A0A445FJJ4_GLYSO (RING-H2 finger protein ATL5 OS=Glycine soja OX=3848 GN=D0Y65_052153 PE=4 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.366e-45 Identity = 101/201 (50.25%), Postives = 126/201 (62.69%), Query Frame = 0
Query: 6 DPDLAAKYARNGKVLVASSILLFILVLIIVLFRTYVYLCHRYHHRRRQRPLTTT----FNEQKLDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRP---ESHIEWSDISGFEPGEGC--SYFPEPIGCPRKQLNLNLSNYRISFETGKEERNFRILAGTGG 197
+PD+ +KYA NGKV+V ++ILLFIL++II+ F TYV C R P ++ ++ LDPSI+KSLP+FT+S+ A R+L DCAVCLSEF DGDE R LPNC H FH+ CIDTW+ SHS CPLCR V+P S E +S E GEGC S P PIGCPRK L +N I E + ER + G G
Sbjct: 4 EPDVESKYAHNGKVMVGTAILLFILIIIIIFFHTYVRFCRRRRRFSHSLPTNSSAAASLDDPCLDPSIIKSLPTFTFSA-ATHRSLQDCAVCLSEFSDGDEGRVLPNCKHSFHAHCIDTWIGSHSTCPLCRTPVKPVTGSSDTEPGSVSVSEAGEGCSSSSLPPPIGCPRKPLGIN-----IIVEIPEVERGSDSVTGDQG 198
BLAST of rna-XM_012714088.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0EQU0|A0A0R0EQU0_SOYBN (RING-type domain-containing protein OS=Glycine max OX=3847 GN=100800433 PE=4 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.366e-45 Identity = 101/201 (50.25%), Postives = 126/201 (62.69%), Query Frame = 0
Query: 6 DPDLAAKYARNGKVLVASSILLFILVLIIVLFRTYVYLCHRYHHRRRQRPLTTT----FNEQKLDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRP---ESHIEWSDISGFEPGEGC--SYFPEPIGCPRKQLNLNLSNYRISFETGKEERNFRILAGTGG 197
+PD+ +KYA NGKV+V ++ILLFIL++II+ F TYV C R P ++ ++ LDPSI+KSLP+FT+S+ A R+L DCAVCLSEF DGDE R LPNC H FH+ CIDTW+ SHS CPLCR V+P S E +S E GEGC S P PIGCPRK L +N I E + ER + G G
Sbjct: 4 EPDVESKYAHNGKVMVGTAILLFILIIIIIFFHTYVRFCRRRRRFSHSLPTNSSAAASLDDPCLDPSIIKSLPTFTFSA-ATHRSLQDCAVCLSEFSDGDEGRVLPNCKHSFHAHCIDTWIGSHSTCPLCRTPVKPVTGSSDTEPGSVSVSEAGEGCSSSSLPPPIGCPRKPLGIN-----IIVEIPEVERGSDSVTGDQG 198
BLAST of rna-XM_012714088.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151S8A6|A0A151S8A6_CAJCA (RING-H2 finger protein ATL3L OS=Cajanus cajan OX=3821 GN=KK1_027210 PE=4 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 6.382e-44 Identity = 98/195 (50.26%), Postives = 122/195 (62.56%), Query Frame = 0
Query: 6 DPDLAAKYARNGKVLVASSILLFILVLIIVLFRTYVYLCHRYHHRRRQRPLTTTF---NEQKLDPSILKSLPSFTYSSSAARRTLHDCAVCLSEFIDGDECRTLPNCNHDFHSDCIDTWLASHSNCPLCRALVRPESHIEWSDISGFEPGEGCSYFPEPIGCPRKQLNLNLSNYRISFETGKEERNFRILAGTGG 197
DPD+ +KYA NGKV+V ++ILLFIL+LI+++F TYV C R L T+ E +LDP++LK+LP+FT+S AA R L DCAVCLSEF DGDE R LPNC+H FH+ CID W ASHS CPLCR V+PE+ E + E GEGCS + CPRK L L I E + ER + G G
Sbjct: 2 DPDIESKYAHNGKVMVGTAILLFILILIVIIFHTYVRFCRRRRRLLLSHSLPTSALASGEPRLDPAVLKALPTFTFS--AAHRPLEDCAVCLSEFSDGDEGRVLPNCSHAFHAHCIDAWFASHSTCPLCRTTVQPEASGETA-----EAGEGCS---SSVACPRKALELG-----IIVEVAEVERGSDPVTGDQG 181 The following BLAST results are available for this feature:
BLAST of rna-XM_012714088.1 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11) Total hits: 10
BLAST of rna-XM_012714088.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot) Total hits: 10
BLAST of rna-XM_012714088.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_012714088.1_CaCDCfrontier-NCBI_v1 ID=rna-XM_012714088.1_CaCDCfrontier-NCBI_v1; Name=rna-XM_012714088.1; organism=Cicer arietinum; type=mRNA; length=618bpback to top protein sequence of rna-XM_012714088.1_CaCDCfrontier-NCBI_v1 >rna-XM_012714088.1_CaCDCfrontier-NCBI_v1 ID=rna-XM_012714088.1_CaCDCfrontier-NCBI_v1; Name=rna-XM_012714088.1_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=205bpback to top mRNA from alignment at chr3:36557532..36558370+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_012714088.1_CaCDCfrontier-NCBI_v1 ID=rna-XM_012714088.1_CaCDCfrontier-NCBI_v1; Name=rna-XM_012714088.1; organism=Cicer arietinum; type=mRNA; length=839bp; location=Sequence derived from: chr3:36557532..36558370+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at chr3:36557532..36558370+ >rna-XM_012714088.1_CaCDCfrontier-NCBI_v1 ID=rna-XM_012714088.1_CaCDCfrontier-NCBI_v1; Name=rna-XM_012714088.1; organism=Cicer arietinum; type=CDS; length=618bp; location=Sequence derived from: chr3:36557532..36558370+ (Cicer arietinumback to top |