rna-XM_012714098.2

Transcript Overview
Namerna-XM_012714098.2
Unique Namerna-XM_012714098.2_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length540
Productprotein FAM133B
References
External references for this mRNA
DatabaseAccession
GeneID105851833
GenBankXM_012714098.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr3chromosomechr3:37918333..37920755 +Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascanL025Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ancanL0018Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascanL169Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascanL322Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ancanL0388Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0568Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0615Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0754Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0755Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cancanR094Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cancanR115Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanL1013Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
canccR0290Cajanus cajan Asha genome v1.0Cajanus cajan
canccR0318Cajanus cajan Asha genome v1.0Cajanus cajan
canvrvR166Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR170Vicia faba cv. Tiffany genome v1.0Vicia faba
canvfhR176Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canpvR217Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvrvR211Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canvfhR189Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cantifR183Vicia faba cv. Tiffany genome v1.0Vicia faba
canpvR232Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvfhR192Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvssR223Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR248Vicia sativa cv. Studenica genome v1.0Vicia sativa
canzwsR150Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR171Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuaR186Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR186Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuR188Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR185Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canpsR194Pisum sativum Cameor genome v1aPisum sativum
canpsR209Pisum sativum Cameor genome v1aPisum sativum
canpsR239Pisum sativum Cameor genome v1aPisum sativum
avjcanL115Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL211Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL291Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR133Cicer arietinum
cancarR150Cicer arietinum
cancarR160Cicer arietinum
cancarR181Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Va09G045450.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Hedin2.R1.5g177360.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.5g139200.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat3g011680.1Pisum sativum Cameor genome v1aPisum sativum
jg31061.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun06g098000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_21480Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_01049Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.006G088300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_010429Cajanus cajan Asha genome v1.0Cajanus cajan
LR48_mrnaVigan09g148100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
evm.model.Chr06.1116Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_014662203.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat03G0058700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC105851833gene-LOC105851833_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_012714098.2-1exon-XM_012714098.2-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012714098.2-2exon-XM_012714098.2-2_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012714098.2-3exon-XM_012714098.2-3_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012714098.2-4exon-XM_012714098.2-4_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012714098.2-5exon-XM_012714098.2-5_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012714098.2-6exon-XM_012714098.2-6_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_012569552.1cds-XP_012569552.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS
cds-XP_012569552.1cds-XP_012569552.1_CaCDCfrontier-NCBI_v1_2Cicer arietinumCDS
cds-XP_012569552.1cds-XP_012569552.1_CaCDCfrontier-NCBI_v1_3Cicer arietinumCDS
cds-XP_012569552.1cds-XP_012569552.1_CaCDCfrontier-NCBI_v1_4Cicer arietinumCDS
cds-XP_012569552.1cds-XP_012569552.1_CaCDCfrontier-NCBI_v1_5Cicer arietinumCDS
cds-XP_012569552.1cds-XP_012569552.1_CaCDCfrontier-NCBI_v1_6Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_012714098.2_CaCDCfrontier-NCBI_v1rna-XM_012714098.2_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_012714098.2_CaCDCfrontier-NCBI_v1rna-XM_012714098.2_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


Homology
[Close]
BLAST of rna-XM_012714098.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:9875068-9876442 REVERSE LENGTH=177)

HSP 1 Score: 120.939 bits (302), Expect = 7.818e-35
Identity = 72/98 (73.47%), Postives = 84/98 (85.71%), Query Frame = 0 
Query:   82 RSKRHKKSDRPKKNKEKERSRSHRHKRKKHNLKEKQNDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLDKTKEDKVAESKRNELLNFLNASFD 179
            +S+RHKK ++PKK K+KERS+SHRHKR K+  ++K   E SS PV+LSKFL RDKDDG RRSAVSGKKILLK+DK+KEDK AESKRNELL FLNASFD
Sbjct:   80 KSRRHKKHEKPKKAKDKERSKSHRHKRHKNRERKKGEGEGSSGPVKLSKFLNRDKDDGERRSAVSGKKILLKVDKSKEDKAAESKRNELLKFLNASFD 177
[Close]
BLAST of rna-XM_012714098.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:9875068-9876442 REVERSE LENGTH=177)

HSP 1 Score: 120.939 bits (302), Expect = 7.818e-35
Identity = 72/98 (73.47%), Postives = 84/98 (85.71%), Query Frame = 0 
Query:   82 RSKRHKKSDRPKKNKEKERSRSHRHKRKKHNLKEKQNDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLDKTKEDKVAESKRNELLNFLNASFD 179
            +S+RHKK ++PKK K+KERS+SHRHKR K+  ++K   E SS PV+LSKFL RDKDDG RRSAVSGKKILLK+DK+KEDK AESKRNELL FLNASFD
Sbjct:   80 KSRRHKKHEKPKKAKDKERSKSHRHKRHKNRERKKGEGEGSSGPVKLSKFLNRDKDDGERRSAVSGKKILLKVDKSKEDKAAESKRNELLKFLNASFD 177
[Close]
BLAST of rna-XM_012714098.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3E1A3|A0A1S3E1A3_CICAR (Protein FAM133B OS=Cicer arietinum OX=3827 GN=LOC105851833 PE=4 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 8.953e-114
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0 
Query:    1 KRRRRHHRHSYDSDSYSSSSLSDHSRSESSSDSEQETSHRSKRHKKRSESSSDSEQETSHRSKRHKKRSESSSDSEQETSHRSKRHKKSDRPKKNKEKERSRSHRHKRKKHNLKEKQNDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLDKTKEDKVAESKRNELLNFLNASFD 179
            KRRRRHHRHSYDSDSYSSSSLSDHSRSESSSDSEQETSHRSKRHKKRSESSSDSEQETSHRSKRHKKRSESSSDSEQETSHRSKRHKKSDRPKKNKEKERSRSHRHKRKKHNLKEKQNDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLDKTKEDKVAESKRNELLNFLNASFD
Sbjct:    1 KRRRRHHRHSYDSDSYSSSSLSDHSRSESSSDSEQETSHRSKRHKKRSESSSDSEQETSHRSKRHKKRSESSSDSEQETSHRSKRHKKSDRPKKNKEKERSRSHRHKRKKHNLKEKQNDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLDKTKEDKVAESKRNELLNFLNASFD 179
[Close]
BLAST of rna-XM_012714098.2 vs. UniProtKB/TrEMBL
Match: tr|A0A151TVU2|A0A151TVU2_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_010429 PE=4 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.248e-60
Identity = 100/110 (90.91%), Postives = 107/110 (97.27%), Query Frame = 0 
Query:   70 ESSSDSEQETSHRSKRHKKSDRPKKNKEKERSRSHRHKRKKHNLKEKQNDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLDKTKEDKVAESKRNELLNFLNASFD 179
            E+SSDSE ETSHRS RHK+SDRPKKNKEKERS+SHRHKR+KH +KEKQ+DERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKL+KTKEDKVAESKRNELLNFLNASFD
Sbjct:   84 ETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
[Close]
BLAST of rna-XM_012714098.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445LG39|A0A445LG39_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_008027 PE=4 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 4.355e-55
Identity = 92/99 (92.93%), Postives = 98/99 (98.99%), Query Frame = 0 
Query:   81 HRSKRHKKSDRPKKNKEKERSRSHRHKRKKHNLKEKQNDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLDKTKEDKVAESKRNELLNFLNASFD 179
            HRSKRHKKSDRPKKNKEK+RS+SHRHKR+KH +KEKQ+DERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKL+KTKEDKVAESKRNELLNFLNASFD
Sbjct:   87 HRSKRHKKSDRPKKNKEKDRSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 185
[Close]
BLAST of rna-XM_012714098.2 vs. UniProtKB/TrEMBL
Match: tr|C6T1E5|C6T1E5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100500332 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 5.132e-54
Identity = 91/99 (91.92%), Postives = 97/99 (97.98%), Query Frame = 0 
Query:   81 HRSKRHKKSDRPKKNKEKERSRSHRHKRKKHNLKEKQNDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLDKTKEDKVAESKRNELLNFLNASFD 179
            HRSKRHKKSDRPKKNKEK+RS+SHRHKR+KH +KEKQ+DERSSSPVQLSKFLG DKDDGVRRSAVSGKKILLKL+KTKEDKVAESKRNELLNFLNASFD
Sbjct:   87 HRSKRHKKSDRPKKNKEKDRSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGHDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 185
[Close]
BLAST of rna-XM_012714098.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445FKJ0|A0A445FKJ0_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_052349 PE=4 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 9.586e-54
Identity = 90/99 (90.91%), Postives = 97/99 (97.98%), Query Frame = 0 
Query:   81 HRSKRHKKSDRPKKNKEKERSRSHRHKRKKHNLKEKQNDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLDKTKEDKVAESKRNELLNFLNASFD 179
            HRSKRHKKSDRPKKNKEK++S+SHRHK +KH +KEKQ+DERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKL+KTKEDKVAESKRNELLNFLNASFD
Sbjct:   85 HRSKRHKKSDRPKKNKEKDQSKSHRHKWQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 183
[Close]
BLAST of rna-XM_012714098.2 vs. UniProtKB/TrEMBL
Match: tr|I1NBV0|I1NBV0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100811105 PE=4 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 9.586e-54
Identity = 90/99 (90.91%), Postives = 97/99 (97.98%), Query Frame = 0 
Query:   81 HRSKRHKKSDRPKKNKEKERSRSHRHKRKKHNLKEKQNDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLDKTKEDKVAESKRNELLNFLNASFD 179
            HRSKRHKKSDRPKKNKEK++S+SHRHK +KH +KEKQ+DERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKL+KTKEDKVAESKRNELLNFLNASFD
Sbjct:   85 HRSKRHKKSDRPKKNKEKDQSKSHRHKWQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 183
[Close]
BLAST of rna-XM_012714098.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6KQ44|A0A4D6KQ44_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g1415 PE=4 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 2.184e-53
Identity = 90/99 (90.91%), Postives = 97/99 (97.98%), Query Frame = 0 
Query:   81 HRSKRHKKSDRPKKNKEKERSRSHRHKRKKHNLKEKQNDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLDKTKEDKVAESKRNELLNFLNASFD 179
            HRSKRHK+SDRPKKNKEK+RS+SH HKR+KH +KEKQ+DERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKL+KTKEDKVAESKRNELLNFLNASFD
Sbjct:   89 HRSKRHKRSDRPKKNKEKDRSKSHHHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 187
[Close]
BLAST of rna-XM_012714098.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7IF00|A0A1J7IF00_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_01049 PE=4 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.067e-52
Identity = 91/102 (89.22%), Postives = 96/102 (94.12%), Query Frame = 0 
Query:   78 ETSHRSKRHKKSDRPKKNKEKERSRSHRHKRKKHNLKEKQNDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLDKTKEDKVAESKRNELLNFLNASFD 179
            ET+HRSKRHKKSDR KKNKEK+RS+SHRHKR+KH LKEKQ+ ER SSPVQLSKFLGRDKDD VRRSAVSGKKILLKLDKTKEDK AESKRNELLNFLNASFD
Sbjct:   83 ETTHRSKRHKKSDRSKKNKEKDRSKSHRHKRQKHKLKEKQHGERISSPVQLSKFLGRDKDDSVRRSAVSGKKILLKLDKTKEDKAAESKRNELLNFLNASFD 184
[Close]
BLAST of rna-XM_012714098.2 vs. UniProtKB/TrEMBL
Match: tr|V7BLX9|V7BLX9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G088300g PE=4 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.405e-52
Identity = 88/99 (88.89%), Postives = 96/99 (96.97%), Query Frame = 0 
Query:   81 HRSKRHKKSDRPKKNKEKERSRSHRHKRKKHNLKEKQNDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLDKTKEDKVAESKRNELLNFLNASFD 179
            HRSKRHK+SDRPKKNKEK+RS+SH HKR KH +KEKQ+DER+SSPVQLSKFLGRDK+DGVRRSAVSGKKILLKL+KTKEDKVAESKRNELLNFLNASFD
Sbjct:   85 HRSKRHKRSDRPKKNKEKDRSKSHHHKRPKHKVKEKQHDERNSSPVQLSKFLGRDKNDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 183
[Close]
BLAST of rna-XM_012714098.2 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4PD56|A0A6A4PD56_LUPAL (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00003983 PE=4 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.168e-51
Identity = 90/101 (89.11%), Postives = 94/101 (93.07%), Query Frame = 0 
Query:   79 TSHRSKRHKKSDRPKKNKEKERSRSHRHKRKKHNLKEKQNDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLDKTKEDKVAESKRNELLNFLNASFD 179
            T+HRSKRHKKSDR KKNKEK RS+SHRHKR+KH LKEKQ+ ER SSPVQLSKFLGRDKDD VRRSAVSGKKILLKLDKTKEDK AESKRNELLNFLNASFD
Sbjct:   82 TTHRSKRHKKSDRSKKNKEKGRSKSHRHKRQKHKLKEKQHGERISSPVQLSKFLGRDKDDSVRRSAVSGKKILLKLDKTKEDKAAESKRNELLNFLNASFD 182
The following BLAST results are available for this feature:
BLAST of rna-XM_012714098.2 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
|7.818e-3573.47Symbols: no symbol available | no full name availa... [more]
|7.818e-3573.47Symbols: no symbol available | no full name availa... [more]
back to top
BLAST of rna-XM_012714098.2 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of rna-XM_012714098.2 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3E1A3|A0A1S3E1A3_CICAR8.953e-114100.00Protein FAM133B OS=Cicer arietinum OX=3827 GN=LOC1... [more]
tr|A0A151TVU2|A0A151TVU2_CAJCA1.248e-6090.91Uncharacterized protein OS=Cajanus cajan OX=3821 G... [more]
tr|A0A445LG39|A0A445LG39_GLYSO4.355e-5592.93Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|C6T1E5|C6T1E5_SOYBN5.132e-5491.92Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A445FKJ0|A0A445FKJ0_GLYSO9.586e-5490.91Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|I1NBV0|I1NBV0_SOYBN9.586e-5490.91Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A4D6KQ44|A0A4D6KQ44_VIGUN2.184e-5390.91Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|A0A1J7IF00|A0A1J7IF00_LUPAN1.067e-5289.22Uncharacterized protein OS=Lupinus angustifolius O... [more]
tr|V7BLX9|V7BLX9_PHAVU8.405e-5288.89Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A6A4PD56|A0A6A4PD56_LUPAL1.168e-5189.11Uncharacterized protein OS=Lupinus albus OX=3870 G... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35760SI:CH211-22I13.2coord: 53..179

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_012714098.2_CaCDCfrontier-NCBI_v1 ID=rna-XM_012714098.2_CaCDCfrontier-NCBI_v1; Name=rna-XM_012714098.2; organism=Cicer arietinum; type=mRNA; length=540bp
AAACGACGTCGCAGGCATCACCGTCACTCTTACGATTCTGATTCTTATTC
ATCATCCTCCCTCTCTGACCACTCCAGAAGTGAGAGTTCTTCTGATAGCG
AGCAAGAAACATCTCATCGTTCAAAGAGGCACAAAAAAAGAAGTGAGAGT
TCTTCTGATAGCGAGCAAGAAACATCTCATCGTTCAAAGAGGCACAAAAA
AAGAAGTGAGAGTTCTTCTGATAGCGAGCAAGAAACATCTCATCGTTCAA
AGAGGCACAAAAAAAGCGATAGACCGAAGAAGAATAAGGAAAAGGAGCGA
AGTAGAAGCCATCGCCATAAGCGGAAGAAGCATAATCTAAAAGAGAAGCA
GAACGATGAGAGGAGCAGCAGCCCTGTGCAGCTTTCCAAGTTTTTAGGGC
GCGACAAAGATGACGGTGTTCGCCGTAGTGCTGTATCTGGCAAGAAGATT
CTTCTCAAACTTGATAAAACAAAGGAAGATAAGGTGGCTGAGAGCAAGAG
AAATGAACTGCTTAACTTTTTAAATGCTAGTTTTGATTAG
back to top

protein sequence of rna-XM_012714098.2_CaCDCfrontier-NCBI_v1

>rna-XM_012714098.2_CaCDCfrontier-NCBI_v1 ID=rna-XM_012714098.2_CaCDCfrontier-NCBI_v1; Name=rna-XM_012714098.2_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=179bp
KRRRRHHRHSYDSDSYSSSSLSDHSRSESSSDSEQETSHRSKRHKKRSES
SSDSEQETSHRSKRHKKRSESSSDSEQETSHRSKRHKKSDRPKKNKEKER
SRSHRHKRKKHNLKEKQNDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKI
LLKLDKTKEDKVAESKRNELLNFLNASFD
back to top

mRNA from alignment at chr3:37918333..37920755+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_012714098.2_CaCDCfrontier-NCBI_v1 ID=rna-XM_012714098.2_CaCDCfrontier-NCBI_v1; Name=rna-XM_012714098.2; organism=Cicer arietinum; type=mRNA; length=2423bp; location=Sequence derived from: chr3:37918333..37920755+ (Cicer arietinum
AAACGACGTCGCAGGCATCACCGTCACTCTTACGATTCTGATTCTTATTC
ATCATCCTCCCTCTCTGACCACTCCAGGTTCCAAATCAATTCCTCCCTTA
ACCAACGACATAATTATTTGCTTTCAATTTTTTATCCGTACATACATGAT
TTGATTCAATTTACGATCCATGAATTTTGACTTGAATACGTCGTCGATCG
CTATGTAATACTAGTCTATTTGAATACTTTCCTCTGTATTTAGGTTACAC
GTTTAGTACACATAATTGCAATCGTTGAATTGAATGCGCATTACCCGTTC
CAACATTTTGTTCAtggaatttgtttttatttcattcacCTTCAGGGTTG
TGAAAGGCGGTATAGCTTAGGAAAATTTGAATAAAGTGCTATTTCTACAA
AGTGTTGCTAATATAACGATGAAGTTTGAACCATAGTGTAACAATATTTG
AACAAACGGCCGTTTTCTGCTGCCCTTTATATTGTTCACCGTTGACCAAG
CCTACTCACTGTGTCAGTTGTGAAGTTTCCTTTACCCTTTGTATTGTTTC
TTCTTCACAATTATGATTCTTGCATAATATTCCTTTGTTTATGTTGTTCT
CTCCCCTTTGCTTTACTATAGCTTTGGAAATATGATGTCTTAAAAATGTT
TAATGTTGATGAGTTGTGTGTCTTACACGAAACACTTTTTTCAACAGAGG
TTAGTGTGCCTGTAGATGTTTGCTATAGGCATAAACAAATTTGTCATTAC
CTGTTAATAATAAACGGATTAATTTGGTTCATATCATAAGagatttatta
ttgttatatttactACAGAAGTGAGAGTTCTTCTGATAGCGAGCAAGAAA
CATCTCATCGTTCAAAGAGGCACAAAAAAAGAAGTGAGAGTTCTTCTGAT
AGCGAGCAAGAAACATCTCATCGTTCAAAGAGGCACAAAAAAAGAAGTGA
GAGTTCTTCTGATAGCGAGCAAGAAACATCTCATCGTTCAAAGAGGCACA
AAAAAAGCGATAGACCGAAGAAGGTGATTTTTGGGTGCTACAATTTGTAC
TAGTTATAAACTTGTCCATTTATCTCACCTTCTTCTTTCCCCGCCAGAAT
AAGGAAAAGGAGCGAAGTAGAAGCCATCGCCATAAGCGGAAGAAGCATAA
TCTAAAAGAGGTAGGTCACTATTTCATACCTTGTCTTCCACTGGGTTGTT
TATAAATAGTTTGATATTATTTGgctataaaatttcaactctTGTTGTAA
CTGAAATATCCACTCCATGTTGGATACCTGATTTCATTTAAATCATCATC
TTGTGGTTAAACTTGAGTCAACATGCTCACTGCAAATTgctggatttttt
tttaaattgatattcatcCATGCTAAGATTTATCAACTTAAGATATCTCT
ATAAGAGTACCTTCACATCATCTTCTACACCTTGAAAATATTGATCTATT
GTCATTGTTCCTTTTTCCCGGACTAAAAATTGCATATTACATATACAATT
AATGGTGCTGCAAATTTCCAGTTTGAGATGCTTATGATACTTCCttccta
ttttttgttttggctCTTTGAAATTGGAGCTGGATCTGTGACATGTCTGG
CGCTTGATTGGCTTGCTTGGATGTTGTTTCTTGGTCGGGTTTTTCGTGGT
AATGGGAGTTTTATATAGAAGCAGAACGATGAGAGGAGCAGCAGCCCTGT
GCAGCTTTCCAAGGTTTTTTTATGATCTGTCTCGGAAAGTCAATGTAAAT
ATTTGCTTATACGGTTCTTCATTTTGATAGTTTTTTGTACTCGATCAGTT
TTTAGGGCGCGACAAAGATGACGGTGTTCGCCGTAGTGCTGTATCTGGCA
AGAAGGTATGGTTTAGTATTTGTTTGTTACCATTTCCTTCGGTCATGTTA
TTTACTATCTTGAACCTGCTtccttttgtttgtttgtagATTCTTCTCAA
ACTTGATAAAACAAAGGAAGATAAGGTGGCTGAGAGCAAGAGAAATGAAC
TGCTTAACTTTTTAAATGCTAGTTTTGATTAGCATTGAGAAGGTATGGAT
TTGTTAGTGTACAACTAAGTATGCAGAGAGCCAAGTTTACGTTCTTAGGT
GCTTAATTATTTTGCTATTGTGAGAAGCAATCTAGGGGGGGTGGATGATT
GTACGTACATCTGAGACACTGAGATTGAGTTTGTTCAACATGTATTTTTA
TGATCAGTCGATTCCCGTTTGTGGATTGGTGGTGGCCTTTTGTAGGATGA
CAAGATTTTGACCGGCCATATTCGATACTTGATATTTTGGGATAAGCCAA
TCATTGTGTTATGTgccaaacatatttttatagttttaccCTCTATTGTT
ATTTTGGGTTCATATGTGATTGAATTATCAAATTTGAATTGAACTACATA
GGCATAAGGATTTTAGGTTTCAA
back to top

Coding sequence (CDS) from alignment at chr3:37918333..37920755+

>rna-XM_012714098.2_CaCDCfrontier-NCBI_v1 ID=rna-XM_012714098.2_CaCDCfrontier-NCBI_v1; Name=rna-XM_012714098.2; organism=Cicer arietinum; type=CDS; length=540bp; location=Sequence derived from: chr3:37918333..37920755+ (Cicer arietinum
AAACGACGTCGCAGGCATCACCGTCACTCTTACGATTCTGATTCTTATTC
ATCATCCTCCCTCTCTGACCACTCCAGAAGTGAGAGTTCTTCTGATAGCG
AGCAAGAAACATCTCATCGTTCAAAGAGGCACAAAAAAAGAAGTGAGAGT
TCTTCTGATAGCGAGCAAGAAACATCTCATCGTTCAAAGAGGCACAAAAA
AAGAAGTGAGAGTTCTTCTGATAGCGAGCAAGAAACATCTCATCGTTCAA
AGAGGCACAAAAAAAGCGATAGACCGAAGAAGAATAAGGAAAAGGAGCGA
AGTAGAAGCCATCGCCATAAGCGGAAGAAGCATAATCTAAAAGAGAAGCA
GAACGATGAGAGGAGCAGCAGCCCTGTGCAGCTTTCCAAGTTTTTAGGGC
GCGACAAAGATGACGGTGTTCGCCGTAGTGCTGTATCTGGCAAGAAGATT
CTTCTCAAACTTGATAAAACAAAGGAAGATAAGGTGGCTGAGAGCAAGAG
AAATGAACTGCTTAACTTTTTAAATGCTAGTTTTGATTAG
back to top