rna-XM_012716082.2

Transcript Overview
Namerna-XM_012716082.2
Unique Namerna-XM_012716082.2_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length1194
ProductE3 ubiquitin-protein ligase At1g63170-like, transcript variant X1
References
External references for this mRNA
DatabaseAccession
GeneID101508240
GenBankXM_012716082.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr5chromosomechr5:34447160..34451565 -Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascanL050Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cacanL013Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0023Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0099Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0213Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0293Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cacanL142Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0342Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cacanL189Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascanL500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ancanL0692Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0883Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cancanL131Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanL0484Cicer arietinum ICC 4958 genome v2Cicer arietinum
caicanL0563Cicer arietinum ICC 4958 genome v2Cicer arietinum
canccR0697Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR460Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR461Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR487Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canvrvR385Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canpvR399Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvrvR409Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cantifR342Vicia faba cv. Tiffany genome v1.0Vicia faba
canvfhR353Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cantifR359Vicia faba cv. Tiffany genome v1.0Vicia faba
canvfhR371Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canpvR493Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvssR401Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR426Vicia sativa cv. Studenica genome v1.0Vicia sativa
canzwsR314Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR339Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuaR352Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuaR384Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR392Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR343Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuR403Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canpsR388Pisum sativum Cameor genome v1aPisum sativum
canpsR390Pisum sativum Cameor genome v1aPisum sativum
canpsR447Pisum sativum Cameor genome v1aPisum sativum
avjcanL236Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL484Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL677Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR300Cicer arietinum
cancarR320Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101508240gene-LOC101508240_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_012716082.2-5exon-XM_012716082.2-5_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012716082.2-4exon-XM_012716082.2-4_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012716082.2-3exon-XM_012716082.2-3_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012716082.2-2exon-XM_012716082.2-2_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012716082.2-1exon-XM_012716082.2-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_012571536.1cds-XP_012571536.1_CaCDCfrontier-NCBI_v1_4Cicer arietinumCDS
cds-XP_012571536.1cds-XP_012571536.1_CaCDCfrontier-NCBI_v1_3Cicer arietinumCDS
cds-XP_012571536.1cds-XP_012571536.1_CaCDCfrontier-NCBI_v1_2Cicer arietinumCDS
cds-XP_012571536.1cds-XP_012571536.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_012716082.2_CaCDCfrontier-NCBI_v1rna-XM_012716082.2_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_012716082.2_CaCDCfrontier-NCBI_v1rna-XM_012716082.2_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


Homology
[Close]
BLAST of rna-XM_012716082.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:15724010-15725737 FORWARD LENGTH=453)

HSP 1 Score: 419.853 bits (1078), Expect = 6.145e-145
Identity = 211/345 (61.16%), Postives = 250/345 (72.46%), Query Frame = 0 
Query:   80 LNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQS--------PTIDDPSGTL---LSNSSTIQGEEDVPVASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIFGGHSSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSR-DESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEVGNV-TDEPAIGENTSQQRGD-----------------ENGLAN 394
            LNSGLWIS+ELF TV QI+A+++VL LSK+EHP APLF WIVGYA GCV +LPLL+WRYY     S        P ++  +G     +S +S   G +    +S GS R    ++ +RLK+++EYFK+A+DCFFA+WFVVGNVWIFGGHSSA EAPN+YRLC+VFLTFSC+GYAMPFILC TICCCLPCIIS LG  EDLTQ RGAT ESINALPTHKFKL +++S  D++     EGGVVA GT+ ER ISGEDAVCCIC+A Y NN++LRELPCSH FHKECVD WLKINA CPLCKSEVG   +D  + G  TS   G+                 ENGLAN
Sbjct:  107 LNSGLWISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQASEQDSGQHRPNLNVAAGPFAFSISRTSEADGRQTNTTSSRGS-RYPGFISAARLKVIVEYFKMALDCFFAVWFVVGNVWIFGGHSSAAEAPNLYRLCLVFLTFSCIGYAMPFILCTTICCCLPCIISILGYREDLTQPRGATPESINALPTHKFKLKKSRSNGDDNGSSTSEGGVVAAGTDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEVGEKNSDLTSQGILTSLSSGENDNHQQQQQQQRSELRVENGLAN 450
[Close]
BLAST of rna-XM_012716082.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:15724010-15725737 FORWARD LENGTH=453)

HSP 1 Score: 419.853 bits (1078), Expect = 6.145e-145
Identity = 211/345 (61.16%), Postives = 250/345 (72.46%), Query Frame = 0 
Query:   80 LNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQS--------PTIDDPSGTL---LSNSSTIQGEEDVPVASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIFGGHSSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSR-DESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEVGNV-TDEPAIGENTSQQRGD-----------------ENGLAN 394
            LNSGLWIS+ELF TV QI+A+++VL LSK+EHP APLF WIVGYA GCV +LPLL+WRYY     S        P ++  +G     +S +S   G +    +S GS R    ++ +RLK+++EYFK+A+DCFFA+WFVVGNVWIFGGHSSA EAPN+YRLC+VFLTFSC+GYAMPFILC TICCCLPCIIS LG  EDLTQ RGAT ESINALPTHKFKL +++S  D++     EGGVVA GT+ ER ISGEDAVCCIC+A Y NN++LRELPCSH FHKECVD WLKINA CPLCKSEVG   +D  + G  TS   G+                 ENGLAN
Sbjct:  107 LNSGLWISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQASEQDSGQHRPNLNVAAGPFAFSISRTSEADGRQTNTTSSRGS-RYPGFISAARLKVIVEYFKMALDCFFAVWFVVGNVWIFGGHSSAAEAPNLYRLCLVFLTFSCIGYAMPFILCTTICCCLPCIISILGYREDLTQPRGATPESINALPTHKFKLKKSRSNGDDNGSSTSEGGVVAAGTDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEVGEKNSDLTSQGILTSLSSGENDNHQQQQQQQRSELRVENGLAN 450
[Close]
BLAST of rna-XM_012716082.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:30225864-30227360 FORWARD LENGTH=407)

HSP 1 Score: 362.073 bits (928), Expect = 7.168e-123
Identity = 173/318 (54.40%), Postives = 229/318 (72.01%), Query Frame = 0 
Query:   66 RGDSRGEGGSRRTPLNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRY--YAR---RDQSPTIDDPSG-------TLLSNSSTIQGEEDVPVASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIFGGHSSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSR-DESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEVG 370
            RGD+ G G   R+PLNSGLWIS+EL  TV QIVA+++V+ L+K+EHP APLF W++GY  GC+ +LP+L+WR+  Y R   +D S       G       T +S +     E    V+++  N        +RL  L+++FK+A+DCFFA+WFVVGNVWIFGGHSS +++P +YRLC+ FLTFSC+GYAMPFILC TICCCLPC+IS LG  E+ +QTRGAT E+INALP ++FK   +KSR D    +  EGG +  G++K+R+ISGEDA CCIC+  Y +++ +RELPCSH+FH +CVD WLKINA CPLCK+EVG
Sbjct:   87 RGDN-GNGRRTRSPLNSGLWISVELVVTVAQIVAAIVVMVLAKDEHPEAPLFTWVIGYTCGCLATLPILYWRFRTYNRATGQDSSQRATSSQGNSESTPYTAVSVAQAADEENSTGVSAAPRNNQVGESLRTRLNGLVDHFKMAIDCFFAVWFVVGNVWIFGGHSSPSDSPKLYRLCIAFLTFSCIGYAMPFILCATICCCLPCLISVLGFRENFSQTRGATAEAINALPVYRFK---SKSRNDLEFSEEGEGGFLLLGSQKKRLISGEDASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCKNEVG 400
[Close]
BLAST of rna-XM_012716082.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:22645680-22647290 FORWARD LENGTH=379)

HSP 1 Score: 163.696 bits (413), Expect = 2.132e-46
Identity = 98/290 (33.79%), Postives = 145/290 (50.00%), Query Frame = 0 
Query:   86 ISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARR-DQSPTIDDPSGTLLSNSSTIQGEEDVPVASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIFGGHSS-ANEAPNMYRLCVVFLTFSC----VGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAG---GTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCK 366
            I L++ +  + ++ S+ +L  S +E P  PL  WI+GY   C+  +  +   Y  RR   SP    PSG   SN  ++ G ED     S +N      +        ++ + A   F  +W+++G  W+     + A  +P +Y LCV FL F      +  A+  ++ + +CCCLPCII+ L     L    GA  E I  L   KF   +N  +        +GG++ G    ++ ERM+  EDA C IC+  YE+  +LRELPC H FH  CVD WL+INA CPLCK
Sbjct:   85 IVLDILWNFLFVIVSIAILGFSSDEDPDVPLRLWIIGYNVQCLFHVGCVIAEYKRRRVANSPP---PSGEDSSNHESLSGSEDESDGYSINNTD----DDDHGTSFTKHLESANTMFSFVWWIIGFYWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVICVAVASLIGIAVCCCLPCIIAILYA---LADQEGAPDEEIERLLKFKFLTVKNSEKVNGEIRETQGGIMTGLDTESQTERMLLSEDAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCK 364
[Close]
BLAST of rna-XM_012716082.2 vs. Araport11
Match: | (Symbols: DDR1 | Drought-Responsive RING Protein 1 | chr5:22668019-22669312 FORWARD LENGTH=343)

HSP 1 Score: 161.77 bits (408), Expect = 4.746e-46
Identity = 105/304 (34.54%), Postives = 163/304 (53.62%), Query Frame = 0 
Query:   69 SRGEGGSRRTPLNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQSPTIDDPSGTLLSNSSTIQ-GEEDVPVASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIFGGH-SSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDL-TQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEV 369
            SR + GS   P NS  W+  EL   ++Q+      L +SK E P  P+  WI GY  GC+++L LL+ RY     +   I+  +G +L +    Q G E+         R+S LMN  R          +++ FFAIWFV+GNVW+F     S + AP ++ LCV  L ++ + Y+ PF+L + +CC +P I S LG   ++ +  R A+ + I++LP+ KFK                    A  ++ +     +D  CCIC+A Y++ +++R+LPCSH FH +CVD WL+I + CPLCK ++
Sbjct:   77 SRSDLGS--NPFNSSTWMMSELIALLVQLTVITFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRY-----RQLDINQGNGFVLGDVEQQQRGREET--------RSSHLMNKCR---------TSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLAWNAICYSFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFK---------------RIDDSASDSDSDSATVTDDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDL 341
[Close]
BLAST of rna-XM_012716082.2 vs. Araport11
Match: | (Symbols: DDR1 | Drought-Responsive RING Protein 1 | chr5:22668019-22669312 FORWARD LENGTH=343)

HSP 1 Score: 161.77 bits (408), Expect = 4.746e-46
Identity = 105/304 (34.54%), Postives = 163/304 (53.62%), Query Frame = 0 
Query:   69 SRGEGGSRRTPLNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQSPTIDDPSGTLLSNSSTIQ-GEEDVPVASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIFGGH-SSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDL-TQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEV 369
            SR + GS   P NS  W+  EL   ++Q+      L +SK E P  P+  WI GY  GC+++L LL+ RY     +   I+  +G +L +    Q G E+         R+S LMN  R          +++ FFAIWFV+GNVW+F     S + AP ++ LCV  L ++ + Y+ PF+L + +CC +P I S LG   ++ +  R A+ + I++LP+ KFK                    A  ++ +     +D  CCIC+A Y++ +++R+LPCSH FH +CVD WL+I + CPLCK ++
Sbjct:   77 SRSDLGS--NPFNSSTWMMSELIALLVQLTVITFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRY-----RQLDINQGNGFVLGDVEQQQRGREET--------RSSHLMNKCR---------TSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLAWNAICYSFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFK---------------RIDDSASDSDSDSATVTDDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDL 341
[Close]
BLAST of rna-XM_012716082.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:13411705-13412889 REVERSE LENGTH=335)

HSP 1 Score: 160.614 bits (405), Expect = 1.296e-45
Identity = 113/350 (32.29%), Postives = 178/350 (50.86%), Query Frame = 0 
Query:   27 TETSHETETSP---IRQTSVTEVDFRVARLRVSSNGSNSRMIRGDSRGEGGSRRTPLNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQSPTIDDPSGTLLSNSSTIQGEEDVPVASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIFGGH-SSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDL-TQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEVGN 371
            T+    T T+P      +    +  RV+R R           +  SR + G+   P NS  W+  EL   ++QI      L LSKNE P  P+  WI GY  GC+++L LL+ RY   R Q  + +        N+ +    E    +   + R S LMN  R          +++ FFAIWFV+GNVW+F     S + AP ++ LC+  L ++ + Y+ PF+L + +CC +P + S LG   ++ +  +GA+ + I++LP+ K+KL  +++ D S                    +  D  CCIC+A Y+  +++R+LPCSH FH +CVD WL+I + CPLCK ++ N
Sbjct:   28 TQLDDNTHTAPESSPSSSFFMRLAMRVSRARWFIFLRRVFHYQNASRSDLGT--NPFNSIAWMVSELIALLLQITVITSTLALSKNERPVWPMRLWITGYNVGCLLNLMLLYGRY---RQQDTSHE--------NAFSFGDIEQQQRSREETTRCSHLMNKCR---------TSLELFFAIWFVIGNVWVFDSRFGSFHYAPILHVLCISLLAWNALCYSFPFLLFLLLCCVVPLVSSFLGYNMNVGSSEKGASDDQISSLPSWKYKL-IDETSDSSQ-------------------ANNDPECCICLAKYKEKEEVRKLPCSHRFHLKCVDQWLRIISCCPLCKQDLPN 335
[Close]
BLAST of rna-XM_012716082.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:13411705-13412889 REVERSE LENGTH=335)

HSP 1 Score: 160.614 bits (405), Expect = 1.296e-45
Identity = 113/350 (32.29%), Postives = 178/350 (50.86%), Query Frame = 0 
Query:   27 TETSHETETSP---IRQTSVTEVDFRVARLRVSSNGSNSRMIRGDSRGEGGSRRTPLNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQSPTIDDPSGTLLSNSSTIQGEEDVPVASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIFGGH-SSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDL-TQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEVGN 371
            T+    T T+P      +    +  RV+R R           +  SR + G+   P NS  W+  EL   ++QI      L LSKNE P  P+  WI GY  GC+++L LL+ RY   R Q  + +        N+ +    E    +   + R S LMN  R          +++ FFAIWFV+GNVW+F     S + AP ++ LC+  L ++ + Y+ PF+L + +CC +P + S LG   ++ +  +GA+ + I++LP+ K+KL  +++ D S                    +  D  CCIC+A Y+  +++R+LPCSH FH +CVD WL+I + CPLCK ++ N
Sbjct:   28 TQLDDNTHTAPESSPSSSFFMRLAMRVSRARWFIFLRRVFHYQNASRSDLGT--NPFNSIAWMVSELIALLLQITVITSTLALSKNERPVWPMRLWITGYNVGCLLNLMLLYGRY---RQQDTSHE--------NAFSFGDIEQQQRSREETTRCSHLMNKCR---------TSLELFFAIWFVIGNVWVFDSRFGSFHYAPILHVLCISLLAWNALCYSFPFLLFLLLCCVVPLVSSFLGYNMNVGSSEKGASDDQISSLPSWKYKL-IDETSDSSQ-------------------ANNDPECCICLAKYKEKEEVRKLPCSHRFHLKCVDQWLRIISCCPLCKQDLPN 335
[Close]
BLAST of rna-XM_012716082.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:7053737-7055516 REVERSE LENGTH=390)

HSP 1 Score: 153.68 bits (387), Expect = 1.667e-42
Identity = 107/352 (30.40%), Postives = 174/352 (49.43%), Query Frame = 0 
Query:   30 SHETETSPIRQTSVTEVDFRVARLRVSSNGSNSRMIRGDSR--GEGGSRRTPLNSGLW------ISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQSPTIDDPSGTLLSNSSTIQGEEDVPVASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWI-FGGHSSANEAPNMYRLCVVFL----TFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEK--ERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCK 366
            S + E++PI +++  +     AR     +  + RM+R  S    E  + +       W      + L++ + +  +   + VL LS++E P+ PL  W+VGY   C + +  +   Y  RR +    +D  G+ L+NSS+ Q      +   G        NP++      + + A   F  IW+++G  W+  GG + ++++P +Y LC++FL     F     A+  ++ + +CCCLPCII+ L    D     GA+   I+ +P  +F    N    E       G +   GT+   ER +S EDA CCIC+  YE+  +LRELPC+H FH  C+D WL IN+ CPLCK
Sbjct:   48 SVDEESNPIHRSARRQGLREAARFL--RHAGSRRMMREPSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRRHP-EDGGGSGLTNSSSQQYVSLAQLEDRGETS-----NPAK------HLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAILYAVAD---QEGASKNDIDQMPKFRFTKTGNV---EKLSGKARGIMTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCK 379
[Close]
BLAST of rna-XM_012716082.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:25515412-25516767 REVERSE LENGTH=343)

HSP 1 Score: 139.428 bits (350), Expect = 1.563e-37
Identity = 96/345 (27.83%), Postives = 163/345 (47.25%), Query Frame = 0 
Query:   34 ETSPIRQTSVTEVDFRVARLRVSSNGSNSRMIRGDSRGEGGSRRTPLN-SGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQSPTIDDPSGTLLSNSSTIQGEEDVPVASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIF-GGHSSANEAPNMYRLCVVFLTFS------CVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFK-LNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEV 369
            ++SP RQ  +      V   R S     S ++R  +  E   RR     S   ++L++ +    ++ ++++L + K E P+ P+  WI GYA  C+V + L++  +  R  +S       G L +  +T Q  ED         R         +  ++ +          +W++VG  W+  GG      A ++Y L  VFL F       CV  A   ++ + +CCCLPCII+ L     +    GA+   ++ LP ++F  +N ++ + +    +      +     ER++  EDA CCIC+++YE+  +L  LPC+H FH  C+  WLK+NA CPLCK  +
Sbjct:   21 QSSPRRQPVIA-----VLLNRASGRRGASMVVRETAAQELEERRADWGYSKPVVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEFRKRNARSR-----PGDLEAAQATNQDSED----EDNDERFLSTKTCESMNTIISF----------VWWIVGFYWLVSGGDILLQNATHLYWLTFVFLAFDVFFAIFCVVLAC--LIGIALCCCLPCIIALLYA---VAGQEGASEADLSILPKYRFHTMNNDEKQSDGGGKMIPVDAASENLGNERVLLPEDADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNI 336
[Close]
BLAST of rna-XM_012716082.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q93Z92|RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.610e-41
Identity = 107/352 (30.40%), Postives = 174/352 (49.43%), Query Frame = 0 
Query:   30 SHETETSPIRQTSVTEVDFRVARLRVSSNGSNSRMIRGDSR--GEGGSRRTPLNSGLW------ISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQSPTIDDPSGTLLSNSSTIQGEEDVPVASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWI-FGGHSSANEAPNMYRLCVVFL----TFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEK--ERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCK 366
            S + E++PI +++  +     AR     +  + RM+R  S    E  + +       W      + L++ + +  +   + VL LS++E P+ PL  W+VGY   C + +  +   Y  RR +    +D  G+ L+NSS+ Q      +   G        NP++      + + A   F  IW+++G  W+  GG + ++++P +Y LC++FL     F     A+  ++ + +CCCLPCII+ L    D     GA+   I+ +P  +F    N    E       G +   GT+   ER +S EDA CCIC+  YE+  +LRELPC+H FH  C+D WL IN+ CPLCK
Sbjct:   48 SVDEESNPIHRSARRQGLREAARFL--RHAGSRRMMREPSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRRHP-EDGGGSGLTNSSSQQYVSLAQLEDRGETS-----NPAK------HLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAILYAVAD---QEGASKNDIDQMPKFRFTKTGNV---EKLSGKARGIMTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCK 379
[Close]
BLAST of rna-XM_012716082.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LN71|RING1_ARATH (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.028e-36
Identity = 105/340 (30.88%), Postives = 163/340 (47.94%), Query Frame = 0 
Query:   54 RVSSNGSNSRMIRGDSR--GEGGSRRTPLNSGLW------ISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQSPTIDDPSGTLLSNSSTIQGEED-VPVASSGSNRASWLMNPSRLKI------LMEYFKIAVDCFFAIWFVVGNVWI-FGGHSSANEAPNMYRLCVVFLTFSCVGY----AMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKL--NRNKSRDESTPDVFEGGVVAGGTEK--ERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEV 369
            R  S  S+ R++R  S    E  + +       W      + L++ + +  +  +  +L +S+ EHP  PL  W++GYA  CV+ +  +   Y  R  +       +    S SS+       +   + GS R S + + S   +      + ++ + A   F  IW+++G  W+  GG   A E+P +Y L +VFL F         A+  ++ + +CCCLPCII+ L    D     GA+ E I  L   KF+   + NK  ++      EG +   GT+   E  +  EDA CCIC++ YE+  +LRELPC H FH  CVD WL INA CPLCK  +
Sbjct:   61 RFLSRASSGRVMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAD---QEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNI 397
[Close]
BLAST of rna-XM_012716082.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q8GUU2|RIE1_ARATH (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.832e-35
Identity = 87/323 (26.93%), Postives = 152/323 (47.06%), Query Frame = 0 
Query:   54 RVSSNGSNSRMIRGDSRGEGGSRRTPLN-SGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQSPTIDDPSGTLLSNSSTIQGEEDVPVASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIF-GGHSSANEAPNMYRLCVVFLT----FSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAG-GTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEV 369
            R++ + + S ++R  +      RR     S   ++ ++ +    ++AS ++L  +  E P+ P+  WI  Y   C+  + L++  Y+ R       D  S      +     E+D   +   S   S++     +  ++ +          IW+++G  W+  GG     EAPN+Y L V+FL     F+     +  ++ + +CCCLPCII+ L     +  T G +   +  LP +KFK   +  ++ + P       + G     ER +  EDA CCIC+++YE+  +L  LPC+H FH  C+  WLK+ A CPLCK  +
Sbjct:   45 RITGHRAPSMLVRETAARALEERRIDWGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWRRNSTRRARDLESYDHEDYNIEYDYEQD---SDDNSTTYSFVKRCESINTVISF----------IWWIIGFYWVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCIIALLYA---VAGTEGVSEAELGVLPLYKFKAFHSNEKNITGPGKMVPIPINGLCLATERTLLAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNI 351
[Close]
BLAST of rna-XM_012716082.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q8LDB8|RING2_ARATH (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 5.469e-32
Identity = 92/277 (33.21%), Postives = 140/277 (50.54%), Query Frame = 0 
Query:  107 SKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQSPTIDDPSGTLLSNSSTIQGEEDVPVASSGSNRASWL---MNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIF-GGHSSANEAPNMYRLCVVFLTFSCVGY----AMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKL---NRNKSRDESTPDVFEGGVVAG-GTEK--ERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEV 369
            S +E+P+ PL  WI+GY   C++ +  +   Y  R  +      P  +  S+SS+   +E+  +  S ++   +L      +      ++ + A      IW+V+G  W+  GG   A  +P +Y LC+VFL F         A+  ++ + +CCCLPCII+ L     + +  GA+ E I+ L   KF+        + DE       GGV+   GT+   E  +  EDA CCIC++ YE+  +LRELPC H FH  CVD WL INA CPLCK  +
Sbjct:   96 SSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYA---VAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNI 369
[Close]
BLAST of rna-XM_012716082.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LT17|BBR_ARATH (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 9.633e-14
Identity = 34/105 (32.38%), Postives = 56/105 (53.33%), Query Frame = 0 
Query:  269 TQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEVGNVT 373
            T++RG + ++I +LP+ ++K   N++                         G +  C IC  +YE+++DL  LPC H +H EC++ WLKIN +CP+C +EV   T
Sbjct:  257 TESRGLSADTIASLPSKRYKEGDNQN-------------------------GTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTST 336
[Close]
BLAST of rna-XM_012716082.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q66HG0|RNF13_RAT (E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus OX=10116 GN=Rnf13 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.109e-13
Identity = 52/167 (31.14%), Postives = 71/167 (42.51%), Query Frame = 0 
Query:  213 IFGGHSSANEAPNMYR-------LCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGAT--TESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWL-KINALCPLCKSEV 369
            +F G SSAN   + +        + V  L+     Y +PF++ V IC  L  I       +D  + R      + +  LP HKFK                      G E +        VC IC+  YE+ D LR LPCSH +H +CVD WL K    CP+CK +V
Sbjct:  148 VFIGESSANSLKDEFTYEKGGHVILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPVHKFK---------------------KGDEYD--------VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 285
[Close]
BLAST of rna-XM_012716082.2 vs. UniProtKB/Swiss-Prot
Match: sp|O54965|RNF13_MOUSE (E3 ubiquitin-protein ligase RNF13 OS=Mus musculus OX=10090 GN=Rnf13 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.241e-13
Identity = 52/167 (31.14%), Postives = 71/167 (42.51%), Query Frame = 0 
Query:  213 IFGGHSSANEAPNMYR-------LCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGAT--TESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWL-KINALCPLCKSEV 369
            +F G SSAN   + +        + V  L+     Y +PF++ V IC  L  I       +D  + R      + +  LP HKFK                      G E +        VC IC+  YE+ D LR LPCSH +H +CVD WL K    CP+CK +V
Sbjct:  148 VFIGESSANSLKDEFTYEKGGHIILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPVHKFK---------------------KGDEYD--------VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 285
[Close]
BLAST of rna-XM_012716082.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q0VD51|RNF13_BOVIN (E3 ubiquitin-protein ligase RNF13 OS=Bos taurus OX=9913 GN=RNF13 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.154e-13
Identity = 51/167 (30.54%), Postives = 70/167 (41.92%), Query Frame = 0 
Query:  213 IFGGHSSANEAPNMYR-------LCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGAT--TESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWL-KINALCPLCKSEV 369
            +F G SSAN   + +        + V   +     Y +PF++ V IC  L  I       +D  + R      + +  LP HKFK                      G E +        VC IC+  YE+ D LR LPCSH +H +CVD WL K    CP+CK +V
Sbjct:  148 VFIGESSANSLKDEFTYEKGGHIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFK---------------------KGDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 285
[Close]
BLAST of rna-XM_012716082.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q5RCV8|RNF13_PONAB (E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii OX=9601 GN=RNF13 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.716e-13
Identity = 51/167 (30.54%), Postives = 70/167 (41.92%), Query Frame = 0 
Query:  213 IFGGHSSANEAPNMYR-------LCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGAT--TESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWL-KINALCPLCKSEV 369
            +F G SSAN   + +        + V   +     Y +PF++ V IC  L  I       +D  + R      + +  LP HKFK                      G E +        VC IC+  YE+ D LR LPCSH +H +CVD WL K    CP+CK +V
Sbjct:  148 VFIGESSANSLKDEFTYEKGGHLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFK---------------------KGDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 285
[Close]
BLAST of rna-XM_012716082.2 vs. UniProtKB/Swiss-Prot
Match: sp|O43567|RNF13_HUMAN (E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens OX=9606 GN=RNF13 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.716e-13
Identity = 51/167 (30.54%), Postives = 70/167 (41.92%), Query Frame = 0 
Query:  213 IFGGHSSANEAPNMYR-------LCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGAT--TESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWL-KINALCPLCKSEV 369
            +F G SSAN   + +        + V   +     Y +PF++ V IC  L  I       +D  + R      + +  LP HKFK                      G E +        VC IC+  YE+ D LR LPCSH +H +CVD WL K    CP+CK +V
Sbjct:  148 VFIGESSANSLKDEFTYEKGGHLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFK---------------------KGDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 285
[Close]
BLAST of rna-XM_012716082.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3E961|A0A1S3E961_CICAR (E3 ubiquitin-protein ligase At1g63170-like isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101508240 PE=4 SV=1)

HSP 1 Score: 823.157 bits (2125), Expect = 0.000e+0
Identity = 397/397 (100.00%), Postives = 397/397 (100.00%), Query Frame = 0 
Query:    1 MEGAVSPQSEQGLLMAQQPNHHVIDITETSHETETSPIRQTSVTEVDFRVARLRVSSNGSNSRMIRGDSRGEGGSRRTPLNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQSPTIDDPSGTLLSNSSTIQGEEDVPVASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIFGGHSSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEVGNVTDEPAIGENTSQQRGDENGLANTSL 397
            MEGAVSPQSEQGLLMAQQPNHHVIDITETSHETETSPIRQTSVTEVDFRVARLRVSSNGSNSRMIRGDSRGEGGSRRTPLNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQSPTIDDPSGTLLSNSSTIQGEEDVPVASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIFGGHSSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEVGNVTDEPAIGENTSQQRGDENGLANTSL
Sbjct:    1 MEGAVSPQSEQGLLMAQQPNHHVIDITETSHETETSPIRQTSVTEVDFRVARLRVSSNGSNSRMIRGDSRGEGGSRRTPLNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQSPTIDDPSGTLLSNSSTIQGEEDVPVASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIFGGHSSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEVGNVTDEPAIGENTSQQRGDENGLANTSL 397
[Close]
BLAST of rna-XM_012716082.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y909|A0A1S2Y909_CICAR (E3 ubiquitin-protein ligase At1g63170-like isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101508240 PE=4 SV=1)

HSP 1 Score: 816.609 bits (2108), Expect = 0.000e+0
Identity = 396/397 (99.75%), Postives = 396/397 (99.75%), Query Frame = 0 
Query:    1 MEGAVSPQSEQGLLMAQQPNHHVIDITETSHETETSPIRQTSVTEVDFRVARLRVSSNGSNSRMIRGDSRGEGGSRRTPLNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQSPTIDDPSGTLLSNSSTIQGEEDVPVASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIFGGHSSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEVGNVTDEPAIGENTSQQRGDENGLANTSL 397
            MEGAVSPQSEQGLLMAQQPNHHVIDITETSHETETSPIRQTSVTEVDFRVARLRVSSNGSNSRMIRGDSRGEGGSRRTPLNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQSPTIDDPSGTLLSNSSTIQGEEDVPVASSGSNRASWLMNP RLKILMEYFKIAVDCFFAIWFVVGNVWIFGGHSSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEVGNVTDEPAIGENTSQQRGDENGLANTSL
Sbjct:    1 MEGAVSPQSEQGLLMAQQPNHHVIDITETSHETETSPIRQTSVTEVDFRVARLRVSSNGSNSRMIRGDSRGEGGSRRTPLNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQSPTIDDPSGTLLSNSSTIQGEEDVPVASSGSNRASWLMNP-RLKILMEYFKIAVDCFFAIWFVVGNVWIFGGHSSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEVGNVTDEPAIGENTSQQRGDENGLANTSL 396
[Close]
BLAST of rna-XM_012716082.2 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NDQ5|A0A2Z6NDQ5_TRISU (RING-type domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_306770 PE=4 SV=1)

HSP 1 Score: 507.294 bits (1305), Expect = 9.910e-177
Identity = 258/397 (64.99%), Postives = 296/397 (74.56%), Query Frame = 0 
Query:   15 MAQQPNHHVIDITETSHETETSPIRQTSVTEVDFRVARLRVSS---NGSNSRMIRGDSRGEGGSRRTPLNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQ-----SPTIDDPSGTLLSNSSTIQGEEDVP---VASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIFGGHSSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEVGNVTDEPAIGENTSQQRGD---ENGLANTSL 397
            MA    H +IDI+ ++ ET                  RLRVS    N SNSR+IRG+    G      LNSG WISL+  FT+ QIVAS +VL  S+NEHPHAPLFAWIVGYA GC+  LPLL WRYY  R++     + T DD SGTLLSNS+TIQGE+DVP   VASS +N+ SWL+N  RL ILM+YFKI +D FFAIWFV+GNVWIFG  SSA+EAPN+YRLCVVFLT SC+GYAMPFILC+TICCCLPCIISTLGVTED+ QTRGAT E+INALPTHKFK+ ++K  DES+P + EGGVVA GTEKERMISGEDAVCCICI NYEN D+LRELPCSHLFHKECVD WLKI+ALCPLCKSEVG         EN +QQR +   EN  A+TSL
Sbjct:    1 MADPTQHVIIDISNSTSETAPRVNGVEDFGGGGGGGGRLRVSQQTMNRSNSRLIRGNPPSRGA-----LNSGFWISLQFVFTLTQIVASFVVLTSSRNEHPHAPLFAWIVGYALGCIFCLPLLIWRYYYARERYLSQMNTTNDDSSGTLLSNSTTIQGEDDVPDVVVASSRTNQVSWLLN-QRLNILMDYFKITIDLFFAIWFVIGNVWIFGEQSSAHEAPNLYRLCVVFLTLSCIGYAMPFILCLTICCCLPCIISTLGVTEDVAQTRGATYETINALPTHKFKMMKSKIEDESSPTIIEGGVVAEGTEKERMISGEDAVCCICILNYENEDELRELPCSHLFHKECVDKWLKISALCPLCKSEVGGDASGIVNEENATQQRSESRVENNHASTSL 391
[Close]
BLAST of rna-XM_012716082.2 vs. UniProtKB/TrEMBL
Match: tr|A0A9D5ACU8|A0A9D5ACU8_PEA (RING-type domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_050960 PE=4 SV=1)

HSP 1 Score: 505.368 bits (1300), Expect = 5.717e-176
Identity = 249/339 (73.45%), Postives = 278/339 (82.01%), Query Frame = 0 
Query:   56 SSNGSNSRMIRGDSRGEGGSRRTPLNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARR-----DQSPTIDDPSGTLLSNSSTIQGEED-VPVASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIFGGHSSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEVGNVTDEPAIGENTSQQRGD 388
            S   SNSR+ RG+      + RTPLNSG  +SLE  FT  QIVAS++VL  S+NEHPHAPLFAWI+GYASGCVVSLPLL WRY+AR        S T DDPSG LLSN +TIQGEED VPV+S   N+AS L   +RLKILMEYFKI +D FFA WFV+GNVWIFGGHSSANEAPN+YRLCVVFLTFSC+GYA+PFILC+TICCCLPCIISTLGV EDL QTRGAT+E I+ALPTHKFKL ++KS DESTP    GGVV+GGTEKER+ISGEDAVCCICIANYEN+D+LRELPCSHLFHK+CVD WLKINALCPLCK EVG    EP I EN SQQRG+
Sbjct:   44 SRQSSNSRLTRGEDSLGRVTTRTPLNSGFCVSLEFVFTFTQIVASVIVLNSSRNEHPHAPLFAWILGYASGCVVSLPLLLWRYFAREPDSESQSSTTGDDPSGILLSNRTTIQGEEDAVPVSS---NQASSLFRNTRLKILMEYFKIVLDLFFASWFVLGNVWIFGGHSSANEAPNLYRLCVVFLTFSCIGYALPFILCLTICCCLPCIISTLGVNEDLAQTRGATSECISALPTHKFKLKKSKSIDESTPARDGGGVVSGGTEKERVISGEDAVCCICIANYENDDELRELPCSHLFHKDCVDKWLKINALCPLCKREVGGNETEPVIEENASQQRGE 379
[Close]
BLAST of rna-XM_012716082.2 vs. UniProtKB/TrEMBL
Match: tr|A0A072V289|A0A072V289_MEDTR (Putative transcription factor C2H2 family OS=Medicago truncatula OX=3880 GN=25490035 PE=4 SV=1)

HSP 1 Score: 499.204 bits (1284), Expect = 1.741e-173
Identity = 264/395 (66.84%), Postives = 301/395 (76.20%), Query Frame = 0 
Query:   15 MAQQPNHHVIDITETSHETETSPIRQTSVTEVDFRVARLRVSSNGSN-SRMIRGDSRGEGGSRRTPLNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQSPTI----DDPSGTLLSNSSTIQGEEDVPVASSGSNRASWLMNPSRL---KILMEYFKIAVDCFFAIWFVVGNVWIFGGHSSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSRDES--TPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEVGNVTDEPAIGENTSQQRG---DENGLANTS 396
            MA   +H +IDI  TS ET T P  Q    + D    RL VS   SN S   R    G G + R+PLNSG WIS E  FT+ QI+AS++VL  S++EHP APLFAWIVGYASGCVVS+PLL WRY+ R   S       DDPSGTLLSNS+ I GE+DVPV +  S+R S   + S     K+LMEYFK  +D FFAIWFV+GNVWIFGGH+SAN+APN+YRLC+VFLTFSC+GYAMPFILC+TICCCLPCIISTLGVTEDLTQTRGAT+ESINALPTH FK  ++KS DES   P V EGG+VA GTEKERMISGEDAVCCICIANYEN+D+LRELPCSHLFHKECVD WLKINALCPLCKSE+G    EP I EN +QQRG   DENG+A+TS
Sbjct:    1 MANNTHHVIIDIATTS-ETTTLPRHQLHDVDDD---GRLHVSLQTSNHSSSPRRGGGGGGRNSRSPLNSGFWISFEFIFTLSQIIASVIVLISSRDEHPRAPLFAWIVGYASGCVVSIPLLLWRYFVRDQNSSQTNSRTDDPSGTLLSNSTAIHGEDDVPVVAVASSRNSRASSRSMSGRPKLLMEYFKTTLDLFFAIWFVIGNVWIFGGHASANDAPNLYRLCIVFLTFSCIGYAMPFILCLTICCCLPCIISTLGVTEDLTQTRGATSESINALPTHIFKTMKSKSNDESDNIPVVIEGGIVAEGTEKERMISGEDAVCCICIANYENDDELRELPCSHLFHKECVDKWLKINALCPLCKSEIGENVTEPVIEENANQQRGESRDENGIASTS 391
[Close]
BLAST of rna-XM_012716082.2 vs. UniProtKB/TrEMBL
Match: tr|I1JUI4|I1JUI4_SOYBN (RING-type domain-containing protein OS=Glycine max OX=3847 GN=100775815 PE=4 SV=1)

HSP 1 Score: 493.426 bits (1269), Expect = 2.217e-171
Identity = 255/393 (64.89%), Postives = 291/393 (74.05%), Query Frame = 0 
Query:   18 QPNHHVIDIT--ETSHETETSPIRQTSVTEVDFRVARLRVSSNGSNSRMIRGDSRGEGGSRRTPLNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARR--------DQSPTIDDPSGTLLSNSSTIQGEEDVPVAS-SGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIFGGHSSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEVGNVTDEPAIGENTSQQRGD---ENGLANTS 396
            +P HHVIDIT       + +S        +VDF            NSR  R          R+PLNSGLWI +EL  TV QIVAS++VL LSK+EHPHAPL AWIVGYASGCV +LPLL+WRYY  R          SP  +DPSGTLLS+S+T  G ED P +S + SN+ SWLMN +RLK+L+EYFKIAVDCFFAIWFVVGNVWIFGGHSSA++APN+YRLCVVFLTFSC+GYAMPFILC TICCCLPCIIS LGV ED+ QTRGA++ESINALPT+KFK+ RNKS+ ES   V EGGVVA GTEKERMISGEDA CCIC+A YENND+LRELPCSHLFHK+CVD WLKINALCPLCKSEV         G + +Q  G+   ENGL NTS
Sbjct:    3 RPTHHVIDITGSSRPSTSSSSTPHDRLANDVDF---------GALNSRTRRRGDTTRSRQHRSPLNSGLWICVELVITVSQIVASVVVLSLSKHEHPHAPLIAWIVGYASGCVATLPLLYWRYYHNRGVREQESSQASPRSNDPSGTLLSDSTT-NGGEDAPASSRTRSNQESWLMN-ARLKLLVEYFKIAVDCFFAIWFVVGNVWIFGGHSSADQAPNLYRLCVVFLTFSCIGYAMPFILCATICCCLPCIISILGVREDMAQTRGASSESINALPTYKFKMKRNKSKGESNSAVGEGGVVAAGTEKERMISGEDAACCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPLCKSEVSENVRGSVSGVDANQHEGESRVENGLTNTS 384
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BLAST of rna-XM_012716082.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2P4N9|A0A0B2P4N9_GLYSO (E3 ubiquitin-protein ligase OS=Glycine soja OX=3848 GN=D0Y65_009025 PE=4 SV=1)

HSP 1 Score: 493.426 bits (1269), Expect = 2.217e-171
Identity = 255/393 (64.89%), Postives = 291/393 (74.05%), Query Frame = 0 
Query:   18 QPNHHVIDIT--ETSHETETSPIRQTSVTEVDFRVARLRVSSNGSNSRMIRGDSRGEGGSRRTPLNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARR--------DQSPTIDDPSGTLLSNSSTIQGEEDVPVAS-SGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIFGGHSSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEVGNVTDEPAIGENTSQQRGD---ENGLANTS 396
            +P HHVIDIT       + +S        +VDF            NSR  R          R+PLNSGLWI +EL  TV QIVAS++VL LSK+EHPHAPL AWIVGYASGCV +LPLL+WRYY  R          SP  +DPSGTLLS+S+T  G ED P +S + SN+ SWLMN +RLK+L+EYFKIAVDCFFAIWFVVGNVWIFGGHSSA++APN+YRLCVVFLTFSC+GYAMPFILC TICCCLPCIIS LGV ED+ QTRGA++ESINALPT+KFK+ RNKS+ ES   V EGGVVA GTEKERMISGEDA CCIC+A YENND+LRELPCSHLFHK+CVD WLKINALCPLCKSEV         G + +Q  G+   ENGL NTS
Sbjct:    3 RPTHHVIDITGSSRPSTSSSSTPHDRLANDVDF---------GALNSRTRRRGDTTRSRQHRSPLNSGLWICVELVITVSQIVASVVVLSLSKHEHPHAPLIAWIVGYASGCVATLPLLYWRYYHNRGVREQESSQASPRSNDPSGTLLSDSTT-NGGEDAPASSRTRSNQESWLMN-ARLKLLVEYFKIAVDCFFAIWFVVGNVWIFGGHSSADQAPNLYRLCVVFLTFSCIGYAMPFILCATICCCLPCIISILGVREDMAQTRGASSESINALPTYKFKMKRNKSKGESNSAVGEGGVVAAGTEKERMISGEDAACCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPLCKSEVSENVRGSVSGVDANQHEGESRVENGLTNTS 384
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BLAST of rna-XM_012716082.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371E4U8|A0A371E4U8_MUCPR (E3 ubiquitin-protein ligase (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_60745 PE=4 SV=1)

HSP 1 Score: 493.041 bits (1268), Expect = 1.164e-170
Identity = 252/394 (63.96%), Postives = 293/394 (74.37%), Query Frame = 0 
Query:   13 LLMAQQPNHHVIDITETSHETETSPIRQTSVTEVDFRVARLRVSSNGSNSRMIRGDSRGEGGSRRTPLNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYAR------RDQSPTIDDPSGTLLSNSSTIQGEEDVPVASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIFGGHSSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEVG-NVTDEPAIGENTSQQRGD---ENGLANTS 396
            LLMA+ P HHVIDIT +S  + +S        +VD      R+   G ++R             R+PLNSGLWI +EL  TV QIVAS++VL LSK+EHP  PLFAWIVGYASGCV +LPLL+WRYY           SP  +DPSG LLSNS T  G E V  +S  +  ++WLMN +RLK+L+EYFKIAVDCFFAIWFVVGNVWIFGGHSSA EAPN+YRLCVVFLTFSC+GYAMPFILC TICCCLPCIIS LG+ ED+ QTRGA+++ INALPT+KFK+ + +S+ ES   V EGGVVA GTEKERMISG+DAVCCIC+A YENNDDLRELPCSHLFHK+CVD WLKINALCPLCKS VG NVT     GE+  Q +G+   ENGL NTS
Sbjct:   20 LLMAR-PTHHVIDITGSSGPSTSSSSNPNGANDVDIGALNSRIRRRGDSTR----------SRHRSPLNSGLWICIELVVTVSQIVASVVVLCLSKHEHPRTPLFAWIVGYASGCVATLPLLYWRYYHNCLEQDSSQASPRSNDPSGMLLSNSMT-NGGEGVLASSRSNQESAWLMN-ARLKLLVEYFKIAVDCFFAIWFVVGNVWIFGGHSSAAEAPNLYRLCVVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDMAQTRGASSDLINALPTYKFKMKKTRSKGESNSAVGEGGVVAAGTEKERMISGDDAVCCICLAKYENNDDLRELPCSHLFHKDCVDKWLKINALCPLCKSGVGENVTRSAVSGEDADQHQGESRVENGLPNTS 400
[Close]
BLAST of rna-XM_012716082.2 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8LGM6|A0A8B8LGM6_ABRPR (E3 ubiquitin-protein ligase At1g63170-like OS=Abrus precatorius OX=3816 GN=LOC113865277 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 1.523e-170
Identity = 264/404 (65.35%), Postives = 304/404 (75.25%), Query Frame = 0 
Query:    5 VSPQSEQ----GLLMAQQPNHHVIDITETSHETETSPIRQTSVTEVDFRVARLRVSSNGSNSRMIRGDSRGEGGSRRTPLNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYAR---RDQSPTID-DPSGTLLSNSSTIQGEEDVPVASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIFGGHSSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEVG-NVTDEPAIGENTSQQRG---DENGLANTS 396
            V P+  Q     LLMA+ P HHVIDIT T+                 F  A    SS  ++      ++       R+PLNSGLWI +EL  T+ QI A ++VL LSK+EHP APLFAWIVGYASGCV SLPLLFWRYY     RDQ  + + DPSGTLLS SST+ GE+ V V S  SN+ SWLMN +RLK+L+EYFKIAVDCFFAIWFVVGNVWIFGGHSSA+EAPN+YRLCVVFLTFSC+GYAMPFILC TICCCLPCIIS LGV EDLTQT+GAT+ESINALPT+KFK  ++KSRDES  +  EGG+VA GTEKERMI+GEDAVCCIC+A YENND+LRELPCSHLFHK+CVD WL+INALCPLCKSEVG NVT      ++ SQ +G   DENG+ANTS
Sbjct:    6 VRPEEAQFDTYPLLMAR-PTHHVIDITGTA----------------TFEAA---ASSFSNSRTSSSNNNNNNTRRHRSPLNSGLWICIELVLTLSQIAACVVVLSLSKHEHPRAPLFAWIVGYASGCVASLPLLFWRYYHTSHVRDQDSSSNYDPSGTLLS-SSTVNGEDGVMVVSR-SNQDSWLMN-ARLKLLVEYFKIAVDCFFAIWFVVGNVWIFGGHSSADEAPNLYRLCVVFLTFSCIGYAMPFILCATICCCLPCIISILGVREDLTQTQGATSESINALPTYKFKTKKDKSRDESNSNASEGGIVAAGTEKERMIAGEDAVCCICLAKYENNDELRELPCSHLFHKDCVDKWLRINALCPLCKSEVGENVTTGSVSRDDASQHQGESRDENGIANTS 386
[Close]
BLAST of rna-XM_012716082.2 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8JG86|A0A8B8JG86_ABRPR (E3 ubiquitin-protein ligase At1g63170-like OS=Abrus precatorius OX=3816 GN=LOC113846384 PE=4 SV=1)

HSP 1 Score: 474.167 bits (1219), Expect = 2.385e-163
Identity = 243/394 (61.68%), Postives = 285/394 (72.34%), Query Frame = 0 
Query:   20 NHHVIDITETSHETETS----PIRQTSVTEVDFRVARLRVSSNGSNSRMIRGDSRGEGGSRRTPLNSGLWISLELFFTVIQIVASLLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYAR-----------RDQSPTIDDPSGTLLSNSSTIQGEEDVPV-ASSGSNRASWLMNPSRLKILMEYFKIAVDCFFAIWFVVGNVWIFGGHSSANEAPNMYRLCVVFLTFSCVGYAMPFILCVTICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSRDESTPDVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKECVDTWLKINALCPLCKSEVGNVTDEPAIGENTSQQRGDENGLANTSL 397
            + H   +    HE   S    P+ Q SV+            SNG+NSR      RG+    R+P++SGLWIS+EL   V QIVAS++VL LS++EHP  PLF WIVGYASGC  +LPLL+WRYY             R  SP I+DPSGTLLS+S T  GE+  P+  SS S +AS LMN  R+K L+EYFKI++DCFFA+WFVVGNVWIFGGHSSA+EAPN+YRLC+VFL FSC+GYAMPFILC TICCCLPC+IS LGV EDL+Q RGAT+ESINALPT+KFK  +NK   E      EGG+VA GTEKER+ISGEDAVCCIC+A YENND+LRELPCSHLFHK+CVD WLKINALCPLCKSEVG        GE+ SQQR  ENGL NTS+
Sbjct:   31 DRHFSGVDAAQHEERISGVRMPLSQPSVSTSSV--------SNGTNSRNSSFIRRGDTRRNRSPVHSGLWISIELVLLVGQIVASIVVLSLSRHEHPRTPLFQWIVGYASGCAATLPLLYWRYYHHNHMREQDSSLSRQTSPRINDPSGTLLSSSRTNGGEDGHPITVSSRSIQASVLMN-RRMKTLVEYFKISLDCFFAVWFVVGNVWIFGGHSSADEAPNLYRLCIVFLAFSCIGYAMPFILCSTICCCLPCLISILGVREDLSQNRGATSESINALPTYKFKTKKNKRNGEGNIAA-EGGIVAAGTEKERVISGEDAVCCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPLCKSEVGESLTGLVSGEDASQQR-VENGLTNTSV 413
The following BLAST results are available for this feature:
BLAST of rna-XM_012716082.2 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|6.145e-14561.16Symbols: no symbol available | no full name availa... [more]
|6.145e-14561.16Symbols: no symbol available | no full name availa... [more]
|7.168e-12354.40Symbols: no symbol available | no full name availa... [more]
|2.132e-4633.79Symbols: no symbol available | no full name availa... [more]
|4.746e-4634.54Symbols: DDR1 | Drought-Responsive RING Protein 1 ... [more]
|4.746e-4634.54Symbols: DDR1 | Drought-Responsive RING Protein 1 ... [more]
|1.296e-4532.29Symbols: no symbol available | no full name availa... [more]
|1.296e-4532.29Symbols: no symbol available | no full name availa... [more]
|1.667e-4230.40Symbols: no symbol available | no full name availa... [more]
|1.563e-3727.83Symbols: no symbol available | no full name availa... [more]
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BLAST of rna-XM_012716082.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q93Z92|RING4_ARATH1.610e-4130.40E3 ubiquitin-protein ligase At4g11680 OS=Arabidops... [more]
sp|Q9LN71|RING1_ARATH2.028e-3630.88E3 ubiquitin-protein ligase At1g12760 OS=Arabidops... [more]
sp|Q8GUU2|RIE1_ARATH4.832e-3526.93E3 ubiquitin protein ligase RIE1 OS=Arabidopsis th... [more]
sp|Q8LDB8|RING2_ARATH5.469e-3233.21E3 ubiquitin-protein ligase At1g63170 OS=Arabidops... [more]
sp|Q9LT17|BBR_ARATH9.633e-1432.38E3 ubiquitin ligase BIG BROTHER-related OS=Arabido... [more]
sp|Q66HG0|RNF13_RAT2.109e-1331.14E3 ubiquitin-protein ligase RNF13 OS=Rattus norveg... [more]
sp|O54965|RNF13_MOUSE2.241e-1331.14E3 ubiquitin-protein ligase RNF13 OS=Mus musculus ... [more]
sp|Q0VD51|RNF13_BOVIN6.154e-1330.54E3 ubiquitin-protein ligase RNF13 OS=Bos taurus OX... [more]
sp|Q5RCV8|RNF13_PONAB6.716e-1330.54E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii ... [more]
sp|O43567|RNF13_HUMAN6.716e-1330.54E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens ... [more]
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BLAST of rna-XM_012716082.2 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3E961|A0A1S3E961_CICAR0.000e+0100.00E3 ubiquitin-protein ligase At1g63170-like isoform... [more]
tr|A0A1S2Y909|A0A1S2Y909_CICAR0.000e+099.75E3 ubiquitin-protein ligase At1g63170-like isoform... [more]
tr|A0A2Z6NDQ5|A0A2Z6NDQ5_TRISU9.910e-17764.99RING-type domain-containing protein OS=Trifolium s... [more]
tr|A0A9D5ACU8|A0A9D5ACU8_PEA5.717e-17673.45RING-type domain-containing protein OS=Pisum sativ... [more]
tr|A0A072V289|A0A072V289_MEDTR1.741e-17366.84Putative transcription factor C2H2 family OS=Medic... [more]
tr|I1JUI4|I1JUI4_SOYBN2.217e-17164.89RING-type domain-containing protein OS=Glycine max... [more]
tr|A0A0B2P4N9|A0A0B2P4N9_GLYSO2.217e-17164.89E3 ubiquitin-protein ligase OS=Glycine soja OX=384... [more]
tr|A0A371E4U8|A0A371E4U8_MUCPR1.164e-17063.96E3 ubiquitin-protein ligase (Fragment) OS=Mucuna p... [more]
tr|A0A8B8LGM6|A0A8B8LGM6_ABRPR1.523e-17065.35E3 ubiquitin-protein ligase At1g63170-like OS=Abru... [more]
tr|A0A8B8JG86|A0A8B8JG86_ABRPR2.385e-16361.68E3 ubiquitin-protein ligase At1g63170-like OS=Abru... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:3.30.40.10:FF:000348coord: 308..374
e-value: 9.8E-35
score: 119.8
NoneNo IPR availablePANTHERPTHR46225C3H4 TYPE ZINC FINGER PROTEINcoord: 17..370
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 324..366
e-value: 2.58002E-17
score: 73.0771
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 317..376
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 325..366
e-value: 4.9E-10
score: 50.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 325..366
score: 12.282736
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 309..374
e-value: 2.0E-18
score: 67.4

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_012716082.2_CaCDCfrontier-NCBI_v1 ID=rna-XM_012716082.2_CaCDCfrontier-NCBI_v1; Name=rna-XM_012716082.2; organism=Cicer arietinum; type=mRNA; length=1194bp
ATGGAGGGTGCTGTTTCACCTCAATCTGAACAAGGATTGTTAATGGCACA
ACAACCCAATCACCATGTAATTGATATAACTGAAACTTCTCATGAAACTG
AAACCTCACCAATTCGCCAAACAAGTGTTACTGAGGTAGATTTTCGTGTA
GCTAGGTTGCGTGTTTCATCGAATGGGTCCAATTCTAGAATGATACGAGG
GGATTCACGAGGGGAAGGAGGAAGTCGTAGGACTCCATTGAATTCGGGGT
TATGGATTTCTTTGGAGTTGTTTTTCACAGTAATTCAGATTGTTGCTTCT
TTACTTGTTCTTTTTTTGTCCAAAAATGAACATCCTCATGCTCCATTGTT
TGCTTGGATTGTTGGTTATGCTTCTGGGTGTGTTGTTTCACTCCCTTTGT
TATTTTGGCGATATTATGCTCGACGTGACCAATCTCCCACTATTGATGAT
CCTTCGGGGACACTTCTTTCAAATTCATCCACAATTCAAGGTGAAGAAGA
TGTTCCTGTTGCATCCTCTGGTAGCAATCGAGCTTCATGGTTGATGAATC
CGAGCAGACTGAAGATACTTATGGAATACTTCAAAATCGCCGTAGATTGC
TTTTTTGCAATATGGTTTGTTGTTGGAAATGTATGGATTTTTGGAGGACA
TTCTTCAGCTAATGAAGCTCCTAACATGTACCGGTTATGTGTAGTGTTTC
TTACTTTTAGCTGTGTCGGTTATGCAATGCCCTTCATTCTATGTGTAACA
ATCTGCTGCTGTCTTCCTTGTATAATTTCCACTCTTGGGGTCACAGAGGA
TCTGACACAAACCCGAGGTGCAACCACAGAATCTATTAATGCTTTACCGA
CTCACAAGTTCAAATTGAATAGAAACAAAAGCAGAGATGAAAGCACTCCA
GATGTTTTTGAAGGTGGAGTTGTCGCCGGAGGAACTGAAAAGGAACGCAT
GATCTCTGGAGAAGATGCTGTTTGCTGCATATGCATAGCAAACTACGAAA
ATAACGACGATTTGAGAGAATTGCCATGTTCTCATCTTTTCCACAAAGAA
TGTGTAGACACGTGGTTGAAGATAAATGCATTATGCCCTCTTTGCAAGAG
TGAAGTTGGTAATGTTACAGATGAACCTGCCATTGGGGAAAATACCAGCC
AACAAAGGGGTGATGAGAATGGTCTTGCCAATACTTCATTGTAA
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protein sequence of rna-XM_012716082.2_CaCDCfrontier-NCBI_v1

>rna-XM_012716082.2_CaCDCfrontier-NCBI_v1 ID=rna-XM_012716082.2_CaCDCfrontier-NCBI_v1; Name=rna-XM_012716082.2_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=397bp
MEGAVSPQSEQGLLMAQQPNHHVIDITETSHETETSPIRQTSVTEVDFRV
ARLRVSSNGSNSRMIRGDSRGEGGSRRTPLNSGLWISLELFFTVIQIVAS
LLVLFLSKNEHPHAPLFAWIVGYASGCVVSLPLLFWRYYARRDQSPTIDD
PSGTLLSNSSTIQGEEDVPVASSGSNRASWLMNPSRLKILMEYFKIAVDC
FFAIWFVVGNVWIFGGHSSANEAPNMYRLCVVFLTFSCVGYAMPFILCVT
ICCCLPCIISTLGVTEDLTQTRGATTESINALPTHKFKLNRNKSRDESTP
DVFEGGVVAGGTEKERMISGEDAVCCICIANYENNDDLRELPCSHLFHKE
CVDTWLKINALCPLCKSEVGNVTDEPAIGENTSQQRGDENGLANTSL
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mRNA from alignment at chr5:34447160..34451565-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_012716082.2_CaCDCfrontier-NCBI_v1 ID=rna-XM_012716082.2_CaCDCfrontier-NCBI_v1; Name=rna-XM_012716082.2; organism=Cicer arietinum; type=mRNA; length=4406bp; location=Sequence derived from: chr5:34447160..34451565- (Cicer arietinum
CCCCTTTGCCCTTTTCCTTATTTTCTCCAATCTCAGAAGCGATAACGGGC
GGGCCCCACTTCCTCCTTCAACTCCCACACAAAAACGCTGCCGTTTTCAG
TTTTTTGTTTCCACCATAACAGAACAAAACGGGAGCGATTCTTTGAGTGC
TTCATCTTTTTTCAATATCACTCAATCCTTTAATTTAATATCTTCCCTTA
CAACCCAATTACCTAACTAAACCCCTTCTCTTACGCTAATTAATCACAAG
GTATCATTGTCTTAATTTCTTTTCCCCTTTTTTCTTTTCTTTCTATTTAT
TTTCTAATTTGTTCGCTATGCAAAAACAATCTTCCGTGTCTAATTCAGAT
TTTGCATTTGAAATATTTTGACAGAAAAAATAAAGGCTGCAATAACACAC
GAACATGAACATGAACATGAACAAACGAGAATAGAGAAATTCCTATGTTG
TTGTTGTTGTTGTTCAACGACTTGATGATTCCTTTGTTGGAATCGGATGG
AGGGTGCTGTTTCACCTCAATCTGAACAAGGATTGTTAATGGCACAACAA
CCCAATCACCATGTAATTGATATAACTGAAACTTCTCATGAAACTGAAAC
CTCACCAATTCGCCAAACAAGTGTTACTGAGGTAGATTTTCGTGTAGCTA
GGTTGCGTGTTTCATCGAATGGGTCCAATTCTAGAATGATACGAGGGGAT
TCACGAGGGGAAGGAGGAAGTCGTAGGACTCCATTGAATTCGGGGTTATG
GATTTCTTTGGAGTTGTTTTTCACAGTAATTCAGATTGTTGCTTCTTTAC
TTGTTCTTTTTTTGTCCAAAAATGAACATCCTCATGCTCCATTGTTTGCT
TGGATTGTTGGTTATGCTTCTGGGTGTGTTGTTTCACTCCCTTTGTTATT
TTGGCGATATTATGCTCGACGTGACCAATCTCCCACTATTGATGATCCTT
CGGGGACACTTCTTTCAAATTCATCCACAATTCAAGGTGAAGAAGATGTT
CCTGTTGCATCCTCTGGTAGCAATCGAGCTTCATGGTTGATGAATCCGAG
GTATTGTTGTTGTTTTTGTTATTTTTTTAACTAGCATAATTGCATTAATC
ACTACTTTAACATTAATGACAAATCAAAGCAGCCAAGGTTGAATCTTAGT
GGATTGTGGCCGCAAGAACACTGGCATTTACAACACTCAGTCGCGATTTT
GTTATGCTTAAATTCATGTTATTTAATACTTGTTTTCTTTTGCCTTAGAA
TCTTTTTTTTTTTTTTGCCTTCAAATAGTTTGACCTAGAAGCTCGATTTT
AGCTTGGTTTTATGGTGACTCCATAAGTTACTCCAACTTTAGGGAACACC
AAAAAGGATGAAAGTTTTAGTGGTGAACTCACATTAGAGTTTAATCCTCT
TTCATGTTGATGAAGATGGGTTTGATGATAGCTAAGAATCTATTCAGGAT
TTAGACATTTTATTCCTTAGGTATTAGTTTGTAGCCTGGAGTCGATGGGA
TCTTGTTTGGACATATTTTGTTTCTTCCATTGCTCTTTAGTACGACCAAA
TATTTATTAATTATATTACAAATAGTTATAGCCATGAACCTGTGTTTTAA
TCTTAGGGTGCTTCCCTTTAAGACTAATCAACCTGTGAGAATAATGGATT
GCTTTGAGCTAGTACTTTGATATTTATGTACTAATCATTGCCTCAGTTTG
AATGGGAAATGATATACACAGTGTACTTATAACATGTGATCAGAGTAAGG
CCTTCAAGGTGCTCTTTTGTATCACATCCCTTGCTTTTTGCATAAATTTG
GATGCTGCGTCTTTCTGTGTAGTTGTGTGGTAAAGGCTATTCTTGAGAAT
GTTAATGATAGATAGATACTAATAATCAAGACACTTAAGAATCTATTGAA
TTTGTCTGTTTAATTTATTTTTTGTTGAATATTTACTATTCAGTCACTAA
TAGCTATAACTCCTTTGTAAGAAGTTTATAAAGTTGCTAAGCTCTTGCCT
GCATTTAATCAGCAGACTGAAGATACTTATGGAATACTTCAAAATCGCCG
TAGATTGCTTTTTTGCAATATGGTTTGTTGTTGGAAATGTATGGATTTTT
GGAGGACATTCTTCAGCTAATGAAGCTCCTAACATGTACCGGTATGTATA
GCTTCTCAGCAACTCTTACATTCAATATTATGTTTTTTTTTTTCAGAGCC
TGCATTTATATCTCTGTTTCTCTTTTGCTTGACAGGTTATGTGTAGTGTT
TCTTACTTTTAGCTGTGTCGGTTATGCAATGCCCTTCATTCTATGTGTAA
CAATCTGCTGCTGTCTTCCTTGTATAATTTCCACTCTTGGGGTCACAGAG
GATCTGACACAAACCCGAGGTGCAACCACAGAATCTATTAATGCTTTACC
GACTCACAAGTTCAAATTGAATAGAAACAAAAGCAGAGATGAAAGCACTC
CAGATGTTTTTGAAGGTGGAGTTGTCGCCGGAGGAACTGAAAAGGAACGC
ATGATCTCTGGAGAAGATGCTGTAAGTACCAATTGATATTTATTTGTTAA
TTTACTCAGGATACTTAAGTAAAACTTATGTATGATATTTAGGTTTTTCT
TTCGAGCTACTGGGTTAGGTAGAAACCTTTAACTGACAATAGAACCTTAA
AAATATTGTCATATATACCCAATTCACGAGGCGGTGAACTTTGATTTTGT
GTTAGTGCTAACTGGTAATGTCATCAACTTTTGATAATTGCACAGCAAAA
AATCTAAAATACCATTGCTTAGTTTGTGGAATCATATATGGTAATCTGAA
CGTCAAGCCAATTTGTTTCATGGTTACTAAGCAGTTTAATGATGCCTACT
CCTAATTTTCAAGTTTCTATGAGTTAGTCTCTTACTCCGTCAGTTCCTAG
GTGGCTTCTAGGGTGAGGGTTCAATCAAGTCCCTCACAGGTGGAGCATAT
AAAAAATACCATTAGATCAAATCTATGGTCTTGATTTTATATATAAAAAA
AAAAAGAGAATATATACACATTTTCACACACAAATATGTCCCGATCTCTT
CTCCAACTTACCAAAACAACTTCATTTTCCCTCCTCTTACGATGACCATC
GGCAACCTGCACACCTTTAATGACTATGTTTCTCCAATGTTGTTTCAATG
GTGAAAATTTACAAGGTTCATATTTTTTTTTCTATGGCTAAAAAATGATT
TTCCCAAATTGGAAAAAAAAGTGAAAGATAATATCTGTTTTTTTTTTCCT
TTTGTTTTTGTTATGGCCTTTCATATTTAAATTGGTATTGGAAGTATCTT
CAAAAACTACTTTTGTTCGTGTGTGGTAACCACTGTGTTTCAACAAACTA
CATTGGTTAATATTTTCTCCATTTCAAGATCTACGAGAGTCCTCAAGAAA
TTGTGTCATTGAAACAATATGTGAAAAATGATGAAACCCTCAACATTTGG
TACCTTTTTTGTTGAGAATGAAATGGATGATAAGAACAAATAAAAGTACA
GTTACAAAGTTTTTGAAACACCATTATATTGCCATTTTGTGAGAAATTCG
TCCCTATTGTAACTTTGAGATTTATGGGTGTGTGATATGTATTTTTCTGA
GATTGTACCAGATTTTGCATGGGCAATAGAGGACACTAATAGAGAAGATA
AAGGAATATGATTGTGTGTTGAAATGTCTACATGTTCTCATTTTTATTTT
AATAAATGGAAACCTTGTCTCACCTTAGACGCCACCCTGTTCCTAATCTT
TGGTATTTTAGTTTTTTATTTTTGACCCAAAGTTTTGGTTGTTTTAGAAA
ATCGAGATACAATTAAGCATGTTTTTCTCGTTGTATCCATGCAAAGCATG
CATTAAACAAATTAAGGGGAAAAAGTTTGTATATATCTAAATTTATTATT
CCTTAATATGTGTGTCTATACATTAAACTTCCTTAGTATTGTTTGCGTTT
GATGAGTTTGTCTACTGGCCATGACTGTAGTATTGTACTTTCCACGCTTG
TGTGCAGGTTTGCTGCATATGCATAGCAAACTACGAAAATAACGACGATT
TGAGAGAATTGCCATGTTCTCATCTTTTCCACAAAGAATGTGTAGACACG
TGGTTGAAGATAAATGCATTATGCCCTCTTTGCAAGAGTGAAGTTGGTAA
TGTTACAGATGAACCTGCCATTGGGGAAAATACCAGCCAACAAAGGGGTG
ATGAGAATGGTCTTGCCAATACTTCATTGTAATCTATTTACAAATATATG
GTCATGTACAAATTACACAATTGCACAGTTTTGTAAAGCTTTTCCTTCTA
TCTACCCACTCTTTTCCTTGGATGGATAGTGGAACTTAAGTGAGTTCATA
TTTGTCAATGCCCTTATACTGGAGTTATAAGTGAATACAAATTATACTTG
CAGTCT
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Coding sequence (CDS) from alignment at chr5:34447160..34451565-

>rna-XM_012716082.2_CaCDCfrontier-NCBI_v1 ID=rna-XM_012716082.2_CaCDCfrontier-NCBI_v1; Name=rna-XM_012716082.2; organism=Cicer arietinum; type=CDS; length=1194bp; location=Sequence derived from: chr5:34447160..34451565- (Cicer arietinum
ATGGAGGGTGCTGTTTCACCTCAATCTGAACAAGGATTGTTAATGGCACA
ACAACCCAATCACCATGTAATTGATATAACTGAAACTTCTCATGAAACTG
AAACCTCACCAATTCGCCAAACAAGTGTTACTGAGGTAGATTTTCGTGTA
GCTAGGTTGCGTGTTTCATCGAATGGGTCCAATTCTAGAATGATACGAGG
GGATTCACGAGGGGAAGGAGGAAGTCGTAGGACTCCATTGAATTCGGGGT
TATGGATTTCTTTGGAGTTGTTTTTCACAGTAATTCAGATTGTTGCTTCT
TTACTTGTTCTTTTTTTGTCCAAAAATGAACATCCTCATGCTCCATTGTT
TGCTTGGATTGTTGGTTATGCTTCTGGGTGTGTTGTTTCACTCCCTTTGT
TATTTTGGCGATATTATGCTCGACGTGACCAATCTCCCACTATTGATGAT
CCTTCGGGGACACTTCTTTCAAATTCATCCACAATTCAAGGTGAAGAAGA
TGTTCCTGTTGCATCCTCTGGTAGCAATCGAGCTTCATGGTTGATGAATC
CGAGCAGACTGAAGATACTTATGGAATACTTCAAAATCGCCGTAGATTGC
TTTTTTGCAATATGGTTTGTTGTTGGAAATGTATGGATTTTTGGAGGACA
TTCTTCAGCTAATGAAGCTCCTAACATGTACCGGTTATGTGTAGTGTTTC
TTACTTTTAGCTGTGTCGGTTATGCAATGCCCTTCATTCTATGTGTAACA
ATCTGCTGCTGTCTTCCTTGTATAATTTCCACTCTTGGGGTCACAGAGGA
TCTGACACAAACCCGAGGTGCAACCACAGAATCTATTAATGCTTTACCGA
CTCACAAGTTCAAATTGAATAGAAACAAAAGCAGAGATGAAAGCACTCCA
GATGTTTTTGAAGGTGGAGTTGTCGCCGGAGGAACTGAAAAGGAACGCAT
GATCTCTGGAGAAGATGCTGTTTGCTGCATATGCATAGCAAACTACGAAA
ATAACGACGATTTGAGAGAATTGCCATGTTCTCATCTTTTCCACAAAGAA
TGTGTAGACACGTGGTTGAAGATAAATGCATTATGCCCTCTTTGCAAGAG
TGAAGTTGGTAATGTTACAGATGAACCTGCCATTGGGGAAAATACCAGCC
AACAAAGGGGTGATGAGAATGGTCTTGCCAATACTTCATTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD