rna-XM_012716822.1

Transcript Overview
Namerna-XM_012716822.1
Unique Namerna-XM_012716822.1_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length1818
Productchloroplast sensor kinase, chloroplastic, transcript variant X2
References
External references for this mRNA
DatabaseAccession
GeneID101499283
GenBankXM_012716822.1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr6chromosomechr6:8588111..8594010 -Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascanL054Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ancanL0038Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0044Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancanL0224Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascanL453Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cacanL200Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cacanL252Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cancanL164Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanL0641Cicer arietinum ICC 4958 genome v2Cicer arietinum
caicanL0711Cicer arietinum ICC 4958 genome v2Cicer arietinum
canccR0735Cajanus cajan Asha genome v1.0Cajanus cajan
canccR0921Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR626Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR671Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canvrvR487Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canpvR512Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cantifR437Vicia faba cv. Tiffany genome v1.0Vicia faba
canvrvR539Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canvfhR455Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cantifR500Vicia faba cv. Tiffany genome v1.0Vicia faba
canpvR566Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvfhR515Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvssR534Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR543Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvuaR392Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR422Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR394Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR440Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR466Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR418Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canpsR489Pisum sativum Cameor genome v1aPisum sativum
canpsR508Pisum sativum Cameor genome v1aPisum sativum
canpsR519Pisum sativum Cameor genome v1aPisum sativum
avjcanL240Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL429Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR414Cicer arietinum
cancarR415Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101499283gene-LOC101499283_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_012716822.1_CaCDCfrontier-NCBI_v1rna-XM_012716822.1_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_012716822.1_CaCDCfrontier-NCBI_v1rna-XM_012716822.1_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_012716822.1-10exon-XM_012716822.1-10_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012716822.1-9exon-XM_012716822.1-9_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012716822.1-8exon-XM_012716822.1-8_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012716822.1-7exon-XM_012716822.1-7_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012716822.1-6exon-XM_012716822.1-6_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012716822.1-5exon-XM_012716822.1-5_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012716822.1-4exon-XM_012716822.1-4_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012716822.1-3exon-XM_012716822.1-3_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012716822.1-2exon-XM_012716822.1-2_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_012716822.1-1exon-XM_012716822.1-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_012572276.1cds-XP_012572276.1_CaCDCfrontier-NCBI_v1_10Cicer arietinumCDS
cds-XP_012572276.1cds-XP_012572276.1_CaCDCfrontier-NCBI_v1_9Cicer arietinumCDS
cds-XP_012572276.1cds-XP_012572276.1_CaCDCfrontier-NCBI_v1_8Cicer arietinumCDS
cds-XP_012572276.1cds-XP_012572276.1_CaCDCfrontier-NCBI_v1_7Cicer arietinumCDS
cds-XP_012572276.1cds-XP_012572276.1_CaCDCfrontier-NCBI_v1_6Cicer arietinumCDS
cds-XP_012572276.1cds-XP_012572276.1_CaCDCfrontier-NCBI_v1_5Cicer arietinumCDS
cds-XP_012572276.1cds-XP_012572276.1_CaCDCfrontier-NCBI_v1_4Cicer arietinumCDS
cds-XP_012572276.1cds-XP_012572276.1_CaCDCfrontier-NCBI_v1_3Cicer arietinumCDS
cds-XP_012572276.1cds-XP_012572276.1_CaCDCfrontier-NCBI_v1_2Cicer arietinumCDS
cds-XP_012572276.1cds-XP_012572276.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS


Homology
BLAST of rna-XM_012716822.1 vs. Araport11
Match: | (Symbols: CSK | chloroplast sensor kinase | chr1:25434156-25436839 FORWARD LENGTH=611)

HSP 1 Score: 629.017 bits (1621), Expect = 0.000e+0
Identity = 328/533 (61.54%), Postives = 408/533 (76.55%), Query Frame = 0
Query:   71 RKVSTSPVEFTQRLEK-HRSTGLVLPSPDFHTLCLQQLQLFRRIV-PEALLSVYVRPAGSYVMDRLELRRVALYPGGDDESEAEGILILVGHFNVPAGLRAAETALSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETCEKAQSDRS---DNHVSAEEVYSLSPFLDLDKKSWEVQRLRVKDEPVGMRNFTSDQRSNAIDISQSLAMAYVMDQKAMLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKILSTQTKKSQISYDIVEDILMLGDRLSDVLQQLQDAVYLTKANIMRYNEEAIKKMNGSNHILAESEKTQLLDSSSRDGSANKMNETGVEPFSLSTTAQDIEMPLPPLALAP-QRHGIRPCNVSEVLADLVDTIRPLAQNQKRVIELNQFSSPLLAAVEEPALRQAFSNLIEGALLRTRVGGKVGIVSTAAPAGGSLVLIDDDGPDMHYMTQMHSLAPYGQELLAEDMVEDNMTWNFVAGLTIAREILESYGCVVRIISPRIKDAPLGTGGTLIELWLP 597
            R  ST+PVEFTQ +EK H  T ++LPSPDF  LCL+QL LFR+IV P A+LS+YVRPAGSYVMDRLELRRV  YP  +    A  ++ILVG+F +PAGLRAAE +LS  QV++V + +A V PMVKHPFVVGFLVAELP+   E  E+ + ++    +  +S EE Y+L         S   +  RVK   V +  FT +QRS AI+IS++LAMAYVMDQK MLLQQS+WQNNVRMS LVEQIRGPLS+++TLSK+LST TK++QIS+DIVED+++ GD++ D L++LQDAV+LTKANI+R+NEEA+KK+N +++   E+ +++       DGS     +      SL +   D EMP+PPLALAP Q H IRPC++S VL D+V+T+RPLA  Q+RV+EL + S+ L  AVEEPALRQA SNLIEGALLRT VGGKV I+ST APAGGSLV+IDDDGPDM YMTQMHSL P+G ELL+E+MVEDNMTWNFVAGLT+AREILESYGCV+R+ISPR  DA LG GGT +ELWLP
Sbjct:   88 RGASTTPVEFTQMIEKDHLKTKIILPSPDFQRLCLEQLDLFRQIVDPNAVLSIYVRPAGSYVMDRLELRRVTCYPSVN----AGDVVILVGNFGIPAGLRAAEASLSSQQVELVSKHRAAVFPMVKHPFVVGFLVAELPVEAEEEEEEEEEEKPHGVNQFLSPEEAYAL-------PASANTKSPRVKLPSVKV--FTEEQRSYAINISRTLAMAYVMDQKTMLLQQSSWQNNVRMSKLVEQIRGPLSTMRTLSKMLSTHTKRNQISHDIVEDLIVQGDQIKDTLEELQDAVHLTKANIVRHNEEALKKINKTHN---ETRRSKYEHKDPIDGS-----QISSTRLSLGSGLDDSEMPMPPLALAPLQMHSIRPCDISNVLLDMVETVRPLALTQQRVVELGENSASLQVAVEEPALRQALSNLIEGALLRTHVGGKVEILSTRAPAGGSLVVIDDDGPDMRYMTQMHSLTPFGAELLSENMVEDNMTWNFVAGLTVAREILESYGCVIRVISPRSSDAALGAGGTRVELWLP 599          
BLAST of rna-XM_012716822.1 vs. Araport11
Match: | (Symbols: CSK | chloroplast sensor kinase | chr1:25434156-25436216 FORWARD LENGTH=445)

HSP 1 Score: 371.703 bits (953), Expect = 4.082e-123
Identity = 207/373 (55.50%), Postives = 269/373 (72.12%), Query Frame = 0
Query:   71 RKVSTSPVEFTQRLEK-HRSTGLVLPSPDFHTLCLQQLQLFRRIV-PEALLSVYVRPAGSYVMDRLELRRVALYPGGDDESEAEGILILVGHFNVPAGLRAAETALSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETCEKAQSDRS---DNHVSAEEVYSLSPFLDLDKKSWEVQRLRVKDEPVGMRNFTSDQRSNAIDISQSLAMAYVMDQKAMLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKILSTQTKKSQISYDIVEDILMLGDRLSDVLQQLQDAVYLTKANIMRYNEEAIKKMNGSNHILAESEKTQLLDSSSRDGSANKMNETGVEPFSLSTTAQDIEMPLPPLALAP-QRHGIR 437
            R  ST+PVEFTQ +EK H  T ++LPSPDF  LCL+QL LFR+IV P A+LS+YVRPAGSYVMDRLELRRV  YP  +    A  ++ILVG+F +PAGLRAAE +LS  QV++V + +A V PMVKHPFVVGFLVAELP+   E  E+ + ++    +  +S EE Y+L         S   +  RVK   V +  FT +QRS AI+IS++LAMAYVMDQK MLLQQS+WQNNVRMS LVEQIRGPLS+++TLSK+LST TK++QIS+DIVED+++ GD++ D L++LQDAV+LTKANI+R+NEEA+KK+N +++   E+ +++       DGS     +      SL +   D EMP+PPLALAP Q H IR
Sbjct:   88 RGASTTPVEFTQMIEKDHLKTKIILPSPDFQRLCLEQLDLFRQIVDPNAVLSIYVRPAGSYVMDRLELRRVTCYPSVN----AGDVVILVGNFGIPAGLRAAEASLSSQQVELVSKHRAAVFPMVKHPFVVGFLVAELPVEAEEEEEEEEEEKPHGVNQFLSPEEAYALP-------ASANTKSPRVKLPSVKV--FTEEQRSYAINISRTLAMAYVMDQKTMLLQQSSWQNNVRMSKLVEQIRGPLSTMRTLSKMLSTHTKRNQISHDIVEDLIVQGDQIKDTLEELQDAVHLTKANIVRHNEEALKKINKTHN---ETRRSKYEHKDPIDGS-----QISSTRLSLGSGLDDSEMPMPPLALAPLQMHSIR 439          
BLAST of rna-XM_012716822.1 vs. UniProtKB/Swiss-Prot
Match: sp|F4HVG8|CSK_ARATH (Chloroplast sensor kinase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CSK PE=1 SV=1)

HSP 1 Score: 629.017 bits (1621), Expect = 0.000e+0
Identity = 328/533 (61.54%), Postives = 408/533 (76.55%), Query Frame = 0
Query:   71 RKVSTSPVEFTQRLEK-HRSTGLVLPSPDFHTLCLQQLQLFRRIV-PEALLSVYVRPAGSYVMDRLELRRVALYPGGDDESEAEGILILVGHFNVPAGLRAAETALSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETCEKAQSDRS---DNHVSAEEVYSLSPFLDLDKKSWEVQRLRVKDEPVGMRNFTSDQRSNAIDISQSLAMAYVMDQKAMLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKILSTQTKKSQISYDIVEDILMLGDRLSDVLQQLQDAVYLTKANIMRYNEEAIKKMNGSNHILAESEKTQLLDSSSRDGSANKMNETGVEPFSLSTTAQDIEMPLPPLALAP-QRHGIRPCNVSEVLADLVDTIRPLAQNQKRVIELNQFSSPLLAAVEEPALRQAFSNLIEGALLRTRVGGKVGIVSTAAPAGGSLVLIDDDGPDMHYMTQMHSLAPYGQELLAEDMVEDNMTWNFVAGLTIAREILESYGCVVRIISPRIKDAPLGTGGTLIELWLP 597
            R  ST+PVEFTQ +EK H  T ++LPSPDF  LCL+QL LFR+IV P A+LS+YVRPAGSYVMDRLELRRV  YP  +    A  ++ILVG+F +PAGLRAAE +LS  QV++V + +A V PMVKHPFVVGFLVAELP+   E  E+ + ++    +  +S EE Y+L         S   +  RVK   V +  FT +QRS AI+IS++LAMAYVMDQK MLLQQS+WQNNVRMS LVEQIRGPLS+++TLSK+LST TK++QIS+DIVED+++ GD++ D L++LQDAV+LTKANI+R+NEEA+KK+N +++   E+ +++       DGS     +      SL +   D EMP+PPLALAP Q H IRPC++S VL D+V+T+RPLA  Q+RV+EL + S+ L  AVEEPALRQA SNLIEGALLRT VGGKV I+ST APAGGSLV+IDDDGPDM YMTQMHSL P+G ELL+E+MVEDNMTWNFVAGLT+AREILESYGCV+R+ISPR  DA LG GGT +ELWLP
Sbjct:   88 RGASTTPVEFTQMIEKDHLKTKIILPSPDFQRLCLEQLDLFRQIVDPNAVLSIYVRPAGSYVMDRLELRRVTCYPSVN----AGDVVILVGNFGIPAGLRAAEASLSSQQVELVSKHRAAVFPMVKHPFVVGFLVAELPVEAEEEEEEEEEEKPHGVNQFLSPEEAYAL-------PASANTKSPRVKLPSVKV--FTEEQRSYAINISRTLAMAYVMDQKTMLLQQSSWQNNVRMSKLVEQIRGPLSTMRTLSKMLSTHTKRNQISHDIVEDLIVQGDQIKDTLEELQDAVHLTKANIVRHNEEALKKINKTHN---ETRRSKYEHKDPIDGS-----QISSTRLSLGSGLDDSEMPMPPLALAPLQMHSIRPCDISNVLLDMVETVRPLALTQQRVVELGENSASLQVAVEEPALRQALSNLIEGALLRTHVGGKVEILSTRAPAGGSLVVIDDDGPDMRYMTQMHSLTPFGAELLSENMVEDNMTWNFVAGLTVAREILESYGCVIRVISPRSSDAALGAGGTRVELWLP 599          
BLAST of rna-XM_012716822.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YFP6|A0A1S2YFP6_CICAR (Chloroplast sensor kinase, chloroplastic isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101499283 PE=4 SV=1)

HSP 1 Score: 1246.88 bits (3225), Expect = 0.000e+0
Identity = 605/605 (100.00%), Postives = 605/605 (100.00%), Query Frame = 0
Query:    1 MVLLLSSINTHTHTHTIPLTFTFKPHRHPRHPSCFLQTINANPNSDSDDDPRNNFTTLTLTSTRALASAIRKVSTSPVEFTQRLEKHRSTGLVLPSPDFHTLCLQQLQLFRRIVPEALLSVYVRPAGSYVMDRLELRRVALYPGGDDESEAEGILILVGHFNVPAGLRAAETALSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETCEKAQSDRSDNHVSAEEVYSLSPFLDLDKKSWEVQRLRVKDEPVGMRNFTSDQRSNAIDISQSLAMAYVMDQKAMLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKILSTQTKKSQISYDIVEDILMLGDRLSDVLQQLQDAVYLTKANIMRYNEEAIKKMNGSNHILAESEKTQLLDSSSRDGSANKMNETGVEPFSLSTTAQDIEMPLPPLALAPQRHGIRPCNVSEVLADLVDTIRPLAQNQKRVIELNQFSSPLLAAVEEPALRQAFSNLIEGALLRTRVGGKVGIVSTAAPAGGSLVLIDDDGPDMHYMTQMHSLAPYGQELLAEDMVEDNMTWNFVAGLTIAREILESYGCVVRIISPRIKDAPLGTGGTLIELWLPMEVVKSDV 605
            MVLLLSSINTHTHTHTIPLTFTFKPHRHPRHPSCFLQTINANPNSDSDDDPRNNFTTLTLTSTRALASAIRKVSTSPVEFTQRLEKHRSTGLVLPSPDFHTLCLQQLQLFRRIVPEALLSVYVRPAGSYVMDRLELRRVALYPGGDDESEAEGILILVGHFNVPAGLRAAETALSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETCEKAQSDRSDNHVSAEEVYSLSPFLDLDKKSWEVQRLRVKDEPVGMRNFTSDQRSNAIDISQSLAMAYVMDQKAMLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKILSTQTKKSQISYDIVEDILMLGDRLSDVLQQLQDAVYLTKANIMRYNEEAIKKMNGSNHILAESEKTQLLDSSSRDGSANKMNETGVEPFSLSTTAQDIEMPLPPLALAPQRHGIRPCNVSEVLADLVDTIRPLAQNQKRVIELNQFSSPLLAAVEEPALRQAFSNLIEGALLRTRVGGKVGIVSTAAPAGGSLVLIDDDGPDMHYMTQMHSLAPYGQELLAEDMVEDNMTWNFVAGLTIAREILESYGCVVRIISPRIKDAPLGTGGTLIELWLPMEVVKSDV
Sbjct:    1 MVLLLSSINTHTHTHTIPLTFTFKPHRHPRHPSCFLQTINANPNSDSDDDPRNNFTTLTLTSTRALASAIRKVSTSPVEFTQRLEKHRSTGLVLPSPDFHTLCLQQLQLFRRIVPEALLSVYVRPAGSYVMDRLELRRVALYPGGDDESEAEGILILVGHFNVPAGLRAAETALSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETCEKAQSDRSDNHVSAEEVYSLSPFLDLDKKSWEVQRLRVKDEPVGMRNFTSDQRSNAIDISQSLAMAYVMDQKAMLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKILSTQTKKSQISYDIVEDILMLGDRLSDVLQQLQDAVYLTKANIMRYNEEAIKKMNGSNHILAESEKTQLLDSSSRDGSANKMNETGVEPFSLSTTAQDIEMPLPPLALAPQRHGIRPCNVSEVLADLVDTIRPLAQNQKRVIELNQFSSPLLAAVEEPALRQAFSNLIEGALLRTRVGGKVGIVSTAAPAGGSLVLIDDDGPDMHYMTQMHSLAPYGQELLAEDMVEDNMTWNFVAGLTIAREILESYGCVVRIISPRIKDAPLGTGGTLIELWLPMEVVKSDV 605          
BLAST of rna-XM_012716822.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072U4L7|A0A072U4L7_MEDTR (Putative histidine kinase-like ATPase domain-containing protein OS=Medicago truncatula OX=3880 GN=25501852 PE=4 SV=1)

HSP 1 Score: 1013.83 bits (2620), Expect = 0.000e+0
Identity = 511/604 (84.60%), Postives = 542/604 (89.74%), Query Frame = 0
Query:    2 VLLLSSINTHTHTHTIPLTFTFKPHRHPRHPSCFLQTINANPNSDSDDDPRNNFTTLTLTSTRALASAIRKVSTSPVEFTQRLEKHRSTGLVLPSPDFHTLCLQQLQLFRRIVPEALLSVYVRPAGSYVMDRLELRRVALYPGGDDESEAEGILILVGHFNVPAGLRAAETALSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETCEKAQSDRSDNHVSAEEVYSLSPFLDLDKKSWEVQRLRVKDEPVGMRNFTSDQRSNAIDISQSLAMAYVMDQKAMLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKILSTQTKKSQISYDIVEDILMLGDRLSDVLQQLQDAVYLTKANIMRYNEEAIKKMNGSNHILAESEKTQLLDSSSRDGSANKMNETGVEPFSLSTTAQDIEMPLPPLALAPQRHGIRPCNVSEVLADLVDTIRPLAQNQKRVIELNQFSSPLLAAVEEPALRQAFSNLIEGALLRTRVGGKVGIVSTAAPAGGSLVLIDDDGPDMHYMTQMHSLAPYGQELLAEDMVEDNMTWNFVAGLTIAREILESYGCVVRIISPRIKDAPLGTGGTLIELWLPMEVVKSDV 605
            + LLSSINT        L  TFK  R  R+PSCFLQTINANPNSDSDDD RNN TTLTL+STRALASAIRKVSTSPVEFTQRLEKH   GLVLPSPDFH LCLQQLQLFRRIVPE+ LSVYVRPAGSYVMD+LELRRVA+YPGGD ESE EGI ILV HFNVPAGLR+AETALSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETC K QSD  +NHVS +E YSL PFLDLDKKSWE+Q LR+KDEPVGM NFT+DQRSNA+DISQSLAMAYVMDQKAMLLQQSTWQNN+RM+NLVEQIRGPLSSIQTL KILSTQTKKS+ISYDIVEDIL LGDRLSDVLQQLQDAVYLTK NI+RYNEE+IKKMNGSNHI +ES K+QLLD S RDGS NKM+++  EP SL   AQDIEMPLPPLALAP RHGIR CNVSEVLADLVDTI+PLAQNQKRVIE ++ SSPLL +VEEPALRQAFSNLIEGALLRT VGGKV IVST+APAGG+LVLIDDDGPDMHYMTQMHSL PYGQELLAEDMVEDNMTWNFVAGLTIAREILESYGCVVRIISPR KDAPLG GGT +ELWLPM V KSD+
Sbjct:    8 MFLLSSINT--------LPITFKSQRC-RNPSCFLQTINANPNSDSDDDHRNNSTTLTLSSTRALASAIRKVSTSPVEFTQRLEKHPRNGLVLPSPDFHRLCLQQLQLFRRIVPESFLSVYVRPAGSYVMDQLELRRVAVYPGGDAESEEEGIAILVSHFNVPAGLRSAETALSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETCVKGQSDGLNNHVSGKEDYSLPPFLDLDKKSWEIQTLRMKDEPVGMCNFTADQRSNAVDISQSLAMAYVMDQKAMLLQQSTWQNNIRMNNLVEQIRGPLSSIQTLGKILSTQTKKSEISYDIVEDILALGDRLSDVLQQLQDAVYLTKGNILRYNEESIKKMNGSNHIFSESVKSQLLDGSPRDGSVNKMHKSS-EPLSLGAAAQDIEMPLPPLALAPLRHGIRSCNVSEVLADLVDTIKPLAQNQKRVIEHSRLSSPLLVSVEEPALRQAFSNLIEGALLRTHVGGKVTIVSTSAPAGGTLVLIDDDGPDMHYMTQMHSLTPYGQELLAEDMVEDNMTWNFVAGLTIAREILESYGCVVRIISPRTKDAPLGAGGTRLELWLPMAVAKSDI 601          
BLAST of rna-XM_012716822.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6LMB2|A0A2Z6LMB2_TRISU (Histidine kinase domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_79750 PE=4 SV=1)

HSP 1 Score: 1005.36 bits (2598), Expect = 0.000e+0
Identity = 510/606 (84.16%), Postives = 539/606 (88.94%), Query Frame = 0
Query:    2 VLLLSSINTHTHTHTIPLTFTFKPHRHP--RHPSCFLQTINANPNSDSDDDPRNNFTTLTLTSTRALASAIRKVSTSPVEFTQRLEKHRSTGLVLPSPDFHTLCLQQLQLFRRIVPEALLSVYVRPAGSYVMDRLELRRVALYPGGDDESEAEGILILVGHFNVPAGLRAAETALSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETCEKAQSDRSDNHVSAEEVYSLSPFLDLDKKSWEVQRLRVKDEPVGMRNFTSDQRSNAIDISQSLAMAYVMDQKAMLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKILSTQTKKSQISYDIVEDILMLGDRLSDVLQQLQDAVYLTKANIMRYNEEAIKKMNGSNHILAESEKTQLLDSSSRDGSANKMNETGVEPFSLSTTAQDIEMPLPPLALAPQRHGIRPCNVSEVLADLVDTIRPLAQNQKRVIELNQFSSPLLAAVEEPALRQAFSNLIEGALLRTRVGGKVGIVSTAAPAGGSLVLIDDDGPDMHYMTQMHSLAPYGQELLAEDMVEDNMTWNFVAGLTIAREILESYGCVVRIISPRIKDAPLGTGGTLIELWLPMEVVKSDV 605
            +LLLS+INT T      L  TFK  R P  R+PSCFLQTINANPNSDSDD    N +TLTL+STRALASAIRK+STSPVEFTQRLEK R  GLVLPSPDFH LCLQQL LFRRIVPE+ LSVYVRPAGSYVMDRLEL+RVALYPGGD ES++EGI+ILV HFNVPAGLRA ET LSELQ KVVPECKAVVLPMVKHPFVVGFLVAELPLVELETC KAQSD S+N+VS EE YS  PFLDL+KKSWE+Q LRVKDEPVGM NFTSDQRSNAIDISQSLAMAYVMDQKAMLLQQSTWQNNVRM+NLVEQIRGPLSSIQTL KILSTQTKKSQISYDIVEDIL LGDRLSDVL QLQDAV+LTKANIMRYNEE+IKKMNGSNHI A S K+Q LDSS RDG  NKMN++G EP SL   AQDIEMPLPPLAL P +HGIRPCNVSE+LADLV+TIRPLAQNQKRVIEL+Q SS LLAAVEEPALRQAFSNLIEGALLRTRVGGKV IVST APAGG+LVLIDDDGPDMHYMTQMHSL PYGQELLAEDM+EDNMTWNFVAGLTIAREILESYGCVVRIISPR KD PLG GGT +ELWLP  VV+ DV
Sbjct:    1 MLLLSAINTST------LPLTFKSQRIPLHRNPSCFLQTINANPNSDSDD----NSSTLTLSSTRALASAIRKISTSPVEFTQRLEKDRRNGLVLPSPDFHRLCLQQLHLFRRIVPESFLSVYVRPAGSYVMDRLELQRVALYPGGDAESDSEGIVILVAHFNVPAGLRATETILSELQAKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETCVKAQSDGSNNNVSGEEDYSFPPFLDLNKKSWEIQTLRVKDEPVGMHNFTSDQRSNAIDISQSLAMAYVMDQKAMLLQQSTWQNNVRMNNLVEQIRGPLSSIQTLGKILSTQTKKSQISYDIVEDILTLGDRLSDVLHQLQDAVHLTKANIMRYNEESIKKMNGSNHIFAGSVKSQFLDSSPRDGFPNKMNKSG-EPLSLGVAAQDIEMPLPPLALTPLQHGIRPCNVSEILADLVETIRPLAQNQKRVIELSQLSSTLLAAVEEPALRQAFSNLIEGALLRTRVGGKVAIVSTDAPAGGTLVLIDDDGPDMHYMTQMHSLTPYGQELLAEDMIEDNMTWNFVAGLTIAREILESYGCVVRIISPRTKDGPLGAGGTRLELWLPTAVVQPDV 595          
BLAST of rna-XM_012716822.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3PBU1|A0A2K3PBU1_TRIPR (Sensor kinase OS=Trifolium pratense OX=57577 GN=L195_g009405 PE=4 SV=1)

HSP 1 Score: 986.097 bits (2548), Expect = 0.000e+0
Identity = 506/620 (81.61%), Postives = 539/620 (86.94%), Query Frame = 0
Query:    2 VLLLSSINTHTHTHTIPLTFTFKPHRHP--RHPSCFLQTINANPNSDSDDDPRNNFTTLTLTSTRALASAIRKVSTSPVEFTQRLEKHRSTGLVLPSPDFHTLCLQQLQLFRRIVPEALLSVYVRPAGSYVMDRLELRRVALYPGGDDESEAEGILILVGHFNVPAGLRAAETALSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETCEKAQSDRSDNHVSAEEVYSLSPFLDLDKKSWEVQRLRVKDEPVGMRNFTSDQRSNAIDISQSLAMAYVMDQKAMLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKILSTQTKKSQISYDIVEDILMLGDRLSDVLQQLQDAVYLTKANIMRYNEEAIKKMNGSNHILAESEKTQLLDSSSRDGSANKMNETGVEPFSLSTTAQDIEMPLPPLALAPQRHGI--------------RPCNVSEVLADLVDTIRPLAQNQKRVIELNQFSSPLLAAVEEPALRQAFSNLIEGALLRTRVGGKVGIVSTAAPAGGSLVLIDDDGPDMHYMTQMHSLAPYGQELLAEDMVEDNMTWNFVAGLTIAREILESYGCVVRIISPRIKDAPLGTGGTLIELWLPMEVVKSDV 605
            +LLLS+INT T      L FTFK  R P  R+PSCFLQTINA+PNSDSDD    N +TLTL+STRALA+AI KVSTSPVEFTQRLEK R  GLVLPSPDFH LCLQQL LFRRIVPE+ LSVYVRPAGSYVMDRLEL+RVALYPGGD ES+++GI+ILV HFNVPAGLRA ET LSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETC KAQSD S+NHVS EE YSL PFLDL+KKSWE+Q LR+KDEPVGM NF+SDQRS AIDISQ+LAMAYVMDQKAMLLQQSTWQNNVRM+NLVEQIRGPLSSIQTL KILSTQTKKSQISYDIVEDIL LGDRLSDVL QLQDAV+LTKANIMRYNEE+IKKMNGSNHI A S K+Q LDSS RDG  NKMN++G EP SL   AQDIEMPLPPLAL P + GI              RPCNVSE+LADLV+TIRPLA NQKRVIEL+Q SS LLAAVEEPALRQAFSNLIEGALLRTRVGGKV IVST APAGG+LVLIDDDGPDMHYMTQMHSL PYGQELLAEDM+EDNMTWNFVAGLTIAREILESYGCVVRIISPR KD PLG GGT +ELWLP  VV+SDV
Sbjct:    1 MLLLSAINTST------LPFTFKSQRIPLRRNPSCFLQTINASPNSDSDD----NSSTLTLSSTRALAAAISKVSTSPVEFTQRLEKDRRNGLVLPSPDFHRLCLQQLHLFRRIVPESFLSVYVRPAGSYVMDRLELQRVALYPGGDAESDSDGIVILVAHFNVPAGLRATETILSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETCVKAQSDGSNNHVSGEEDYSLPPFLDLNKKSWEIQTLRIKDEPVGMHNFSSDQRSIAIDISQTLAMAYVMDQKAMLLQQSTWQNNVRMNNLVEQIRGPLSSIQTLGKILSTQTKKSQISYDIVEDILSLGDRLSDVLHQLQDAVHLTKANIMRYNEESIKKMNGSNHIFAGSVKSQFLDSSPRDGFPNKMNKSG-EPLSLGVAAQDIEMPLPPLALTPLQPGIRCLHISYALFLMSGRPCNVSEILADLVETIRPLALNQKRVIELSQLSSTLLAAVEEPALRQAFSNLIEGALLRTRVGGKVAIVSTDAPAGGTLVLIDDDGPDMHYMTQMHSLTPYGQELLAEDMIEDNMTWNFVAGLTIAREILESYGCVVRIISPRTKDGPLGAGGTRVELWLPTAVVQSDV 609          
BLAST of rna-XM_012716822.1 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4VII8|A0A9D4VII8_PEA (Uncharacterized protein OS=Pisum sativum OX=3888 GN=KIW84_071538 PE=4 SV=1)

HSP 1 Score: 931.398 bits (2406), Expect = 0.000e+0
Identity = 494/605 (81.65%), Postives = 527/605 (87.11%), Query Frame = 0
Query:    4 LLSSINTHTHTHTIPLTFTFKPHRHPRHPSCFLQTINANPNSDSDDDP--RNNFTTLTLTSTRALASAIRKVSTSPVEFTQRLEKHRSTGLVLPSPDFHTLCLQQLQLFRRIVPEALLSVYVRPAGSYVMDRLELRRVALYPGGDDESEAEGILILVGHFNVPAGLRAAETALSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETCEK-AQSDRSDNHVSAEEVYSLSPFLDLDKKSWEVQRLRVKDEPVGMRNFTSDQRSNAIDISQSLAMAYVMDQKAMLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKILSTQTKKSQISYDIVEDILMLGDRLSDVLQQLQDAVYLTKANIMRYNEEAIKKMNGSNHILAESEKTQLLDSSSRDGSANKMNETGVEPFSLSTTAQDIEMPLPPLALAPQRHGIRPCNVSEVLADLVDTIRPLAQNQKRVIELNQFSSPLLAAVEEPALRQAFSNLIEGALLRTRVGGKVGIVSTAAPAGGSLVLIDDDGPDMHYMTQMHSLAPYGQELLAEDMVEDNMTWNFVAGLTIAREILESYGCVVRIISPRIKDAPLGTGGTLIELWLPMEVVKSDV 605
            LLS+INT T    +PLTF   P R+P   SCFLQT+NANPNSDS  D   RNN  TLTL+S+RALASA+RKVS SPV+FTQRLEK R  G V PSPDFH LCLQQL LFRRIVPE+ LSVYVRPAGSYVMD+LELRRVALYP  D ESE EGI+ILVGHF+  AGLRAAETALSELQV VVPECKA+VLPMVKHPFVVGFLVAELPLVELETCEK AQSDRS+N VS +EVYSLSPFLDLDKKSWE Q  RVKDEPV MRNFTSDQRSNA+DISQSLAMAYVMDQKAMLLQQSTWQNNVRM+NLVEQI GPLSSIQ+LSKILSTQTKKSQIS+DIVEDIL+LGDRL DVL QLQDAVY+TK NIMR+NEEAIKKMN   H+LAESEKTQLLDSS  D SANKMN++G EP SLS  A+DIEMPLPPLAL+P + GIRPCNVSEVL D+VDTIRPLA NQKRVIEL+Q SSPLLAAV EP LRQAFSNLIEGALLRT VGGKV IVS A PAG +LV IDDDGPDMHYMTQMHSL PYGQELLAE MVEDNMTWNFVAGLTIAREILESYGCVVRIISPR KD PLG GGT  ELWLP  V+KS+V
Sbjct:   17 LLSAINTST----LPLTFKSHPFRNP---SCFLQTLNANPNSDSGSDDDSRNNSATLTLSSSRALASALRKVSISPVDFTQRLEKDRKNGPVHPSPDFHRLCLQQLHLFRRIVPESFLSVYVRPAGSYVMDQLELRRVALYPEEDSESEEEGIVILVGHFHAQAGLRAAETALSELQVNVVPECKAIVLPMVKHPFVVGFLVAELPLVELETCEKKAQSDRSNNRVSRKEVYSLSPFLDLDKKSWETQTPRVKDEPVCMRNFTSDQRSNAVDISQSLAMAYVMDQKAMLLQQSTWQNNVRMNNLVEQIHGPLSSIQSLSKILSTQTKKSQISHDIVEDILVLGDRLRDVLHQLQDAVYVTKTNIMRHNEEAIKKMN---HMLAESEKTQLLDSSPVDSSANKMNKSG-EPPSLSAAAKDIEMPLPPLALSPLQLGIRPCNVSEVLVDMVDTIRPLALNQKRVIELSQLSSPLLAAVAEPELRQAFSNLIEGALLRTHVGGKVAIVSNATPAGDTLVCIDDDGPDMHYMTQMHSLTPYGQELLAEGMVEDNMTWNFVAGLTIAREILESYGCVVRIISPRTKDGPLGAGGTRAELWLPAPVMKSNV 610          
BLAST of rna-XM_012716822.1 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4VJ18|A0A9D4VJ18_PEA (Uncharacterized protein OS=Pisum sativum OX=3888 GN=KIW84_071538 PE=4 SV=1)

HSP 1 Score: 924.08 bits (2387), Expect = 0.000e+0
Identity = 495/621 (79.71%), Postives = 528/621 (85.02%), Query Frame = 0
Query:    4 LLSSINTHTHTHTIPLTFTFKPHRHPRHPSCFLQTINANPNSDSDDDP--RNNFTTLTLTSTRALASAIRKVSTSPVEFTQRLEKHRSTGLVLPSPDFHTLCLQQLQLFRRIVPEALLSVYVRPAGSYVMDRLELRRVALYPGGDDESEAEGILILVGHFNVPAGLRAAETALSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETCEK-AQSDRSDNHVSAEEVYSLSPFLDLDKKSWEVQRLRVKDEPVGMRNFTSDQRSNAIDISQSLAMAYVMDQKAMLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKILSTQTKKSQISYDIVEDILMLGDRLSDVLQQLQDAVYLTKA----------------NIMRYNEEAIKKMNGSNHILAESEKTQLLDSSSRDGSANKMNETGVEPFSLSTTAQDIEMPLPPLALAPQRHGIRPCNVSEVLADLVDTIRPLAQNQKRVIELNQFSSPLLAAVEEPALRQAFSNLIEGALLRTRVGGKVGIVSTAAPAGGSLVLIDDDGPDMHYMTQMHSLAPYGQELLAEDMVEDNMTWNFVAGLTIAREILESYGCVVRIISPRIKDAPLGTGGTLIELWLPMEVVKSDV 605
            LLS+INT T    +PLTF   P R+P   SCFLQT+NANPNSDS  D   RNN  TLTL+S+RALASA+RKVS SPV+FTQRLEK R  G V PSPDFH LCLQQL LFRRIVPE+ LSVYVRPAGSYVMD+LELRRVALYP  D ESE EGI+ILVGHF+  AGLRAAETALSELQV VVPECKA+VLPMVKHPFVVGFLVAELPLVELETCEK AQSDRS+N VS +EVYSLSPFLDLDKKSWE Q  RVKDEPV MRNFTSDQRSNA+DISQSLAMAYVMDQKAMLLQQSTWQNNVRM+NLVEQI GPLSSIQ+LSKILSTQTKKSQIS+DIVEDIL+LGDRL DVL QLQDAVY+TKA                NIMR+NEEAIKKMN   H+LAESEKTQLLDSS  D SANKMN++G EP SLS  A+DIEMPLPPLAL+P + GIRPCNVSEVL D+VDTIRPLA NQKRVIEL+Q SSPLLAAV EP LRQAFSNLIEGALLRT VGGKV IVS A PAG +LV IDDDGPDMHYMTQMHSL PYGQELLAE MVEDNMTWNFVAGLTIAREILESYGCVVRIISPR KD PLG GGT  ELWLP  V+KS+V
Sbjct:   17 LLSAINTST----LPLTFKSHPFRNP---SCFLQTLNANPNSDSGSDDDSRNNSATLTLSSSRALASALRKVSISPVDFTQRLEKDRKNGPVHPSPDFHRLCLQQLHLFRRIVPESFLSVYVRPAGSYVMDQLELRRVALYPEEDSESEEEGIVILVGHFHAQAGLRAAETALSELQVNVVPECKAIVLPMVKHPFVVGFLVAELPLVELETCEKKAQSDRSNNRVSRKEVYSLSPFLDLDKKSWETQTPRVKDEPVCMRNFTSDQRSNAVDISQSLAMAYVMDQKAMLLQQSTWQNNVRMNNLVEQIHGPLSSIQSLSKILSTQTKKSQISHDIVEDILVLGDRLRDVLHQLQDAVYVTKAHGYSASHLQFLSSMQTNIMRHNEEAIKKMN---HMLAESEKTQLLDSSPVDSSANKMNKSG-EPPSLSAAAKDIEMPLPPLALSPLQLGIRPCNVSEVLVDMVDTIRPLALNQKRVIELSQLSSPLLAAVAEPELRQAFSNLIEGALLRTHVGGKVAIVSNATPAGDTLVCIDDDGPDMHYMTQMHSLTPYGQELLAEGMVEDNMTWNFVAGLTIAREILESYGCVVRIISPRTKDGPLGAGGTRAELWLPAPVMKSNV 626          
BLAST of rna-XM_012716822.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8M5M7|A0A8B8M5M7_ABRPR (Chloroplast sensor kinase, chloroplastic isoform X1 OS=Abrus precatorius OX=3816 GN=LOC113871222 PE=4 SV=1)

HSP 1 Score: 922.539 bits (2383), Expect = 0.000e+0
Identity = 465/598 (77.76%), Postives = 509/598 (85.12%), Query Frame = 0
Query:   15 HTIPLTFTFKPHRHPRHPSCFLQTINANPNSD-------SDDDPRNNFTTLTLTSTRALASAIRKVSTSPVEFTQRLEKHRSTGLVLPSPDFHTLCLQQLQLFRRIVPEALLSVYVRPAGSYVMDRLELRRVALYPGGDDESEAEGILILVGHFNVPAGLRAAETALSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETCEKAQSDRSDNHVSAEEVYSLSPFLDLDKKSWEVQRLRVKDEPVGMRNFTSDQRSNAIDISQSLAMAYVMDQKAMLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKILSTQTKKSQISYDIVEDILMLGDRLSDVLQQLQDAVYLTKANIMRYNEEAIKKMNGSNHILAESEKTQLLDSSSRDGSANKMNETGVEPFSLSTTAQDIEMPLPPLALAPQRHGIRPCNVSEVLADLVDTIRPLAQNQKRVIELNQFSSPLLAAVEEPALRQAFSNLIEGALLRTRVGGKVGIVSTAAPAGGSLVLIDDDGPDMHYMTQMHSLAPYGQELLAEDMVEDNMTWNFVAGLTIAREILESYGCVVRIISPRIKDAPLGTGGTLIELWLPMEVVKSDV 605
             T+ L F  K H       CFLQT+NANPN         SDDD           S  ALA+AIR+ STSPVEFT R+EK R + LVLPSPDFH LCLQQL LFRRIVPEALLSVYVRPAGSYVMD+LELRRVALYP  D ESEAEGI+ILV HFN+PAGLRAAE  LS LQV VVPECKAVVLPMVK PFVVGFLVAELPLVELE CEK QSD  D+ +S EE YSL PFLDLDKKSWE+Q LRVKDE +GMRNFTS+QRSNA++ISQSLAMAYVMDQKAMLLQQSTWQNNVRM NLVEQIRGPLSSIQTLSKILSTQTK+SQISYDIVEDIL+ GDRL DVLQQLQDAVYLTKANI+RYNEEAIKKMNGS HILAES ++QLLDS   DGSAN+MN++  E   LS   +D+EMPLPP AL+P +HGIRPCNVSEVL DLVD++RPLAQNQKRV+EL + SSPLLAAVEEPALRQAFSNLIEGALLRT VGGKV IVSTAAPAGG+LVLIDDDGPDMHYMTQMHSL PYG+ELL+++M+EDNMTWNFVAGLT+AREILE+YGCVVRI+SPRIKDAPLG GGT +ELWLP  +VKSD+
Sbjct:   10 QTLTLRFPLKSHSLTLPHYCFLQTLNANPNHHALRHVTLSDDDS-------LYPSAAALAAAIRRASTSPVEFTHRVEKDRRSRLVLPSPDFHALCLQQLHLFRRIVPEALLSVYVRPAGSYVMDQLELRRVALYPS-DAESEAEGIVILVAHFNIPAGLRAAEATLSNLQVNVVPECKAVVLPMVKQPFVVGFLVAELPLVELENCEKPQSDGPDDRMSVEERYSLPPFLDLDKKSWEIQTLRVKDEAIGMRNFTSEQRSNAVNISQSLAMAYVMDQKAMLLQQSTWQNNVRMGNLVEQIRGPLSSIQTLSKILSTQTKRSQISYDIVEDILVQGDRLKDVLQQLQDAVYLTKANIVRYNEEAIKKMNGSTHILAESARSQLLDSFPGDGSANQMNKSS-ESLCLSAAVKDMEMPLPPSALSPLQHGIRPCNVSEVLTDLVDSVRPLAQNQKRVVELREHSSPLLAAVEEPALRQAFSNLIEGALLRTHVGGKVEIVSTAAPAGGTLVLIDDDGPDMHYMTQMHSLTPYGKELLSDNMIEDNMTWNFVAGLTVAREILENYGCVVRIVSPRIKDAPLGAGGTRLELWLPSTIVKSDL 598          
BLAST of rna-XM_012716822.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371G6W7|A0A371G6W7_MUCPR (Chloroplast sensor kinase, chloroplastic OS=Mucuna pruriens OX=157652 GN=CSK PE=4 SV=1)

HSP 1 Score: 904.049 bits (2335), Expect = 0.000e+0
Identity = 465/581 (80.03%), Postives = 507/581 (87.26%), Query Frame = 0
Query:   25 PHRHPRHPSCFLQTINANPNSDSDDDPRNNFTTLTLTSTRALASAIRKVSTSPVEFTQRLEKHRSTGLVLPSPDFHTLCLQQLQLFRRIVPEALLSVYVRPAGSYVMDRLELRRVALYPGGDDESEAEGILILVGHFNVPAGLRAAETALSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETCEKAQSDRSDNHVSAEEVYSLSPFLDLDKKSWEVQRLRVKDEPVGMRNFTSDQRSNAIDISQSLAMAYVMDQKAMLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKILSTQTKKSQISYDIVEDILMLGDRLSDVLQQLQDAVYLTKANIMRYNEEAIKKMNGSNHILAESEKTQLLDSSSRDGSANKMNETGVEPFSLSTTAQDIEMPLPPLALAPQRHGIRPCNVSEVLADLVDTIRPLAQNQKRVIELNQFSSPLLAAVEEPALRQAFSNLIEGALLRTRVGGKVGIVSTAAPAGGSLVLIDDDGPDMHYMTQMHSLAPYGQELLAEDMVEDNMTWNFVAGLTIAREILESYGCVVRIISPRIKDAPLGTGGTLIELWLPMEVVKSDV 605
            PH    +PSCFLQT+NANP SDSDD  R     LT+ S  ALASAIRK STSPV FTQRLEK R TGLVLPS DF  LCL QL LFRRIVPEALLSVYVRPAGSYVMDRLELRRVAL PG D ESE+E I+ILVGHFN+PAGLRAAE  LS LQV VVPECKAVVLPMVKHPFVVGFLVAELPLVELE   K QSD  DNH+S EE YSL PFL+LDK S E+Q LRVKDE VGMRNFTS+QRSNA++ISQSLAMAYVMDQKAMLLQQSTWQNNVRM NLVEQIRGPLSSIQTLSKILSTQTK++Q+SYDIVED+L+ GDRL DVLQQLQDAVYLTK NI+RYNEEAIKKMNGS HILAES ++QLLDSS  DGSAN M ++     SLS   QDIEMPLPPLALAP +HGIRPCNVSE+LADLVD+++ LAQ+QKRV+EL++ SSPLLAAVEEPALRQAFSNLIEGALLRT VGGKV IVSTAAPAGG+LVLIDDDGPDMHYMTQMHSL PYGQELL++D +EDNMTWNFVAG+++AREILESYGCVVRI+SPRIKDAPLG GGT +ELWLP  +VKSD+
Sbjct:   34 PHTPIPNPSCFLQTLNANPTSDSDDALR-----LTVPSAAALASAIRKASTSPVHFTQRLEKDRQTGLVLPSTDFLRLCLHQLHLFRRIVPEALLSVYVRPAGSYVMDRLELRRVALCPG-DAESESESIVILVGHFNIPAGLRAAEATLSNLQVNVVPECKAVVLPMVKHPFVVGFLVAELPLVELEQYRKPQSDGPDNHMSVEEPYSLPPFLNLDK-SREIQTLRVKDEAVGMRNFTSEQRSNAVNISQSLAMAYVMDQKAMLLQQSTWQNNVRMGNLVEQIRGPLSSIQTLSKILSTQTKRTQVSYDIVEDLLVQGDRLRDVLQQLQDAVYLTKTNIVRYNEEAIKKMNGSTHILAESARSQLLDSSPGDGSANNMKKSSES-LSLSAAVQDIEMPLPPLALAPLQHGIRPCNVSELLADLVDSVKALAQSQKRVVELSELSSPLLAAVEEPALRQAFSNLIEGALLRTHVGGKVEIVSTAAPAGGTLVLIDDDGPDMHYMTQMHSLTPYGQELLSDDRIEDNMTWNFVAGVSVAREILESYGCVVRIVSPRIKDAPLGAGGTRVELWLPSSIVKSDL 606          
BLAST of rna-XM_012716822.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5MMJ3|A0A6A5MMJ3_LUPAL (Putative histidine kinase-like ATPase domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00006832 PE=4 SV=1)

HSP 1 Score: 904.049 bits (2335), Expect = 0.000e+0
Identity = 464/608 (76.32%), Postives = 520/608 (85.53%), Query Frame = 0
Query:    3 LLLSSINTHTHTHTIPLTFTFKPHRHPRHPSCFLQTINANPNSDSD-----DDPRNNFTTLTLTSTRALASAIRKVSTSPVEFTQRLEKHRSTGLVLPSPDFHTLCLQQLQLFRRIVPEALLSVYVRPAGSYVMDRLELRRVALYPGGDDESEAEGILILVGHFNVPAGLRAAETALSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETCEKAQSDRSDNHVSAEEVYSLSPFLDLDKKSWEVQRLRVKDEPVGMRNFTSDQRSNAIDISQSLAMAYVMDQKAMLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKILSTQTKKSQISYDIVEDILMLGDRLSDVLQQLQDAVYLTKANIMRYNEEAIKKMNGSNHILAESEKTQLLDSSSRDGSANKMNETGVEPFSLSTTAQDIEMPLPPLALAPQRHGIRPCNVSEVLADLVDTIRPLAQNQKRVIELNQFSSPLLAAVEEPALRQAFSNLIEGALLRTRVGGKVGIVSTAAPAGGSLVLIDDDGPDMHYMTQMHSLAPYGQELLAEDMVEDNMTWNFVAGLTIAREILESYGCVVRIISPRIKDAPLGTGGTLIELWLPMEVVKSDV 605
            L LS+  + +HTH++P + +          S  +Q++N NP S        D   ++    T++S  A+ASAIRK STSPVEFT R++ H S GL+LP+PDFHTLCLQQL LFRRIVPEA+LSVYVRPAGSYVMDRLELRRVALYPG D +SE+E I+ILVGHFNVPAGLRAAETALS LQVK+VPECKAVVLPMVKHPFVVGFLVAELPL+ELETC+K QS    NH S E+ YS+ PFLDLDKKSWE+Q +RVKDEPVGM NFTS+QR NA++ISQSLA+AYVMDQKAMLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKI+STQTK+SQISYDIVEDIL+ GDRL DVLQQLQDAVYLTKANI+RYNEEAIKKMNGS HIL+ES ++QLLDS  RDGSANKMN++  E    ST  QDIEMPLPPLALAP +HGIRPCNVSEVLADLVD  +PLAQNQKRV+EL++ S PLLAAVEEPALRQAFSNLIEGALLRT VGGKV IVSTAAPAGG+LVLIDDDGPDMHYMTQMHSL PYGQEL +EDM+EDNMTWNFVAGLT+AREILESYGCVVR+ISPR KDAPLG GGT +ELWLP  V+ SD+
Sbjct:   22 LFLSNPLSLSHTHSLPFSSSSS--------SSSIQSLNPNPISSYSLRHVTDSDDDSHHHSTVSSATAVASAIRKASTSPVEFTHRVQNHHSPGLLLPTPDFHTLCLQQLHLFRRIVPEAVLSVYVRPAGSYVMDRLELRRVALYPG-DGKSESEDIVILVGHFNVPAGLRAAETALSTLQVKLVPECKAVVLPMVKHPFVVGFLVAELPLLELETCDKPQSGGKGNHRSLEDAYSMPPFLDLDKKSWEIQPIRVKDEPVGMYNFTSEQRLNAVNISQSLAVAYVMDQKAMLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKIMSTQTKRSQISYDIVEDILVQGDRLRDVLQQLQDAVYLTKANIVRYNEEAIKKMNGSTHILSESVRSQLLDSVPRDGSANKMNKS-TESLFTSTAVQDIEMPLPPLALAPLQHGIRPCNVSEVLADLVDAAKPLAQNQKRVLELSEPSQPLLAAVEEPALRQAFSNLIEGALLRTCVGGKVEIVSTAAPAGGTLVLIDDDGPDMHYMTQMHSLTPYGQELQSEDMIEDNMTWNFVAGLTVAREILESYGCVVRVISPRTKDAPLGAGGTRLELWLPSPVLTSDL 619          
BLAST of rna-XM_012716822.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151R1U2|A0A151R1U2_CAJCA (Chloroplast sensor kinase, chloroplastic OS=Cajanus cajan OX=3821 GN=KK1_042397 PE=4 SV=1)

HSP 1 Score: 902.894 bits (2332), Expect = 0.000e+0
Identity = 470/613 (76.67%), Postives = 521/613 (84.99%), Query Frame = 0
Query:    3 LLLSSINTHTHTHTIPLTFTF-KPHR---------HPRHPSCFLQTINANPNSDSDDDPRNNFTTLTLTSTRALASAIRKVSTSPVEFTQRLEKHRSTGLVLPSPDFHTLCLQQLQLFRRIVPEALLSVYVRPAGSYVMDRLELRRVALYPGGDDESEAEGILILVGHFNVPAGLRAAETALSELQVKVVPECKAVVLPMVKHPFVVGFLVAELPLVELETCEKAQSDRSDNHVSAEEVYSLSPFLDLDKKSWEVQRLRVKDEPVGMRNFTSDQRSNAIDISQSLAMAYVMDQKAMLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKILSTQTKKSQISYDIVEDILMLGDRLSDVLQQLQDAVYLTKANIMRYNEEAIKKMNGSNHILAESEKTQLLDSSSRDGSANKMNETGVEPFSLSTTAQDIEMPLPPLALAPQRHGIRPCNVSEVLADLVDTIRPLAQNQKRVIELNQFSSPLLAAVEEPALRQAFSNLIEGALLRTRVGGKVGIVSTAAPAGGSLVLIDDDGPDMHYMTQMHSLAPYGQELLAEDMVEDNMTWNFVAGLTIAREILESYGCVVRIISPRIKDAPLGTGGTLIELWLPMEVVKSDV 605
            +L+ ++ THT  H + L  +  KP R         H   PSCFLQT+NA P SDSDD  R     LT++S  ALAS+IR+ S S VEFTQRLEK R +GLVLPS DFH LCL QL L RRIVP+ALLSVYVRPAGSYVMDRLELRRVALYPG D ESEAEGI+ILVGHFN+PAGLRAAE  LS +QV VVPECKAVVLPMVKHPFVVGFLVAELPLVE E C+K QSD  DNH+S EE YSL PF+DLDKKS E+Q L +KDE V M NFTS+QRSNA++ISQSLAMAYVMDQKAMLLQQSTWQNNVRM NLVEQIRGPLSSIQTLSKILSTQTK++QISYDIVED+L+ GDRL DV QQLQDAVYLTK NI+RYNEEAIKKMNGS HILAES ++QLLD+S  DGSANKM ++     SLS   QDIEMPLPPLALAP +HGIRPCNVSEVLADLVD++RPLAQ+QKRV+EL++ SSPLLAAVEEPALRQAFSNLIEGALLRT VGGKV IVST APAGG+LVLIDDDGPDMHYMTQMHSL PYGQELL++DM+EDNMTWNFVAGLT+AREILESYGCVVRI+SPRIKDAPLG GGT +ELWLP  +V+SD+
Sbjct:    1 MLVCAVLTHTPPHKLTLCLSNPKPIRFSSNSVTLPHTTAPSCFLQTLNATPTSDSDDGLR-----LTVSSAAALASSIRQASNSSVEFTQRLEKDRQSGLVLPSTDFHRLCLHQLHLLRRIVPQALLSVYVRPAGSYVMDRLELRRVALYPG-DAESEAEGIVILVGHFNIPAGLRAAEATLSNMQVNVVPECKAVVLPMVKHPFVVGFLVAELPLVEPEQCQKPQSDGPDNHMSVEEPYSLPPFMDLDKKSREIQTLPIKDEAVDMHNFTSEQRSNAVNISQSLAMAYVMDQKAMLLQQSTWQNNVRMGNLVEQIRGPLSSIQTLSKILSTQTKRTQISYDIVEDLLVQGDRLRDVFQQLQDAVYLTKTNIVRYNEEAIKKMNGSTHILAESARSQLLDNSPGDGSANKMKKSSES-LSLSAAVQDIEMPLPPLALAPLQHGIRPCNVSEVLADLVDSVRPLAQSQKRVVELSELSSPLLAAVEEPALRQAFSNLIEGALLRTHVGGKVEIVSTTAPAGGTLVLIDDDGPDMHYMTQMHSLTPYGQELLSDDMIEDNMTWNFVAGLTVAREILESYGCVVRIVSPRIKDAPLGAGGTRVELWLPSSIVQSDL 606          
The following BLAST results are available for this feature:
BLAST of rna-XM_012716822.1 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
|0.000e+061.54Symbols: CSK | chloroplast sensor kinase | chr1:25... [more]
|4.082e-12355.50Symbols: CSK | chloroplast sensor kinase | chr1:25... [more]
back to top
BLAST of rna-XM_012716822.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
sp|F4HVG8|CSK_ARATH0.000e+061.54Chloroplast sensor kinase, chloroplastic OS=Arabid... [more]
back to top
BLAST of rna-XM_012716822.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2YFP6|A0A1S2YFP6_CICAR0.000e+0100.00Chloroplast sensor kinase, chloroplastic isoform X... [more]
tr|A0A072U4L7|A0A072U4L7_MEDTR0.000e+084.60Putative histidine kinase-like ATPase domain-conta... [more]
tr|A0A2Z6LMB2|A0A2Z6LMB2_TRISU0.000e+084.16Histidine kinase domain-containing protein OS=Trif... [more]
tr|A0A2K3PBU1|A0A2K3PBU1_TRIPR0.000e+081.61Sensor kinase OS=Trifolium pratense OX=57577 GN=L1... [more]
tr|A0A9D4VII8|A0A9D4VII8_PEA0.000e+081.65Uncharacterized protein OS=Pisum sativum OX=3888 G... [more]
tr|A0A9D4VJ18|A0A9D4VJ18_PEA0.000e+079.71Uncharacterized protein OS=Pisum sativum OX=3888 G... [more]
tr|A0A8B8M5M7|A0A8B8M5M7_ABRPR0.000e+077.76Chloroplast sensor kinase, chloroplastic isoform X... [more]
tr|A0A371G6W7|A0A371G6W7_MUCPR0.000e+080.03Chloroplast sensor kinase, chloroplastic OS=Mucuna... [more]
tr|A0A6A5MMJ3|A0A6A5MMJ3_LUPAL0.000e+076.32Putative histidine kinase-like ATPase domain-conta... [more]
tr|A0A151R1U2|A0A151R1U2_CAJCA0.000e+076.67Chloroplast sensor kinase, chloroplastic OS=Cajanu... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036890Histidine kinase/HSP90-like ATPase superfamilyGENE3D3.30.565.10coord: 427..581
e-value: 3.6E-9
score: 38.6
IPR036890Histidine kinase/HSP90-like ATPase superfamilySUPERFAMILY55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 436..598
NoneNo IPR availablePANTHERPTHR48206CHLOROPLAST SENSOR KINASE, CHLOROPLASTICcoord: 9..604

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_012716822.1_CaCDCfrontier-NCBI_v1 ID=rna-XM_012716822.1_CaCDCfrontier-NCBI_v1; Name=rna-XM_012716822.1; organism=Cicer arietinum; type=mRNA; length=1818bp
ATGGTGCTTCTACTCTCTTCAATCAACACTCACACTCACACTCACACTAT
CCCACTCACTTTCACCTTCAAACCCCACCGTCACCCTCGCCACCCCTCTT
GTTTCCTCCAAACCATCAACGCCAACCCTAACTCCGATTCCGATGACGAC
CCCCGCAACAACTTCACCACTCTCACCCTCACTTCCACCCGCGCCCTCGC
CTCCGCCATTCGTAAAGTCTCCACCTCACCCGTTGAGTTCACTCAGCGAC
TCGAGAAACATCGCTCAACCGGACTCGTTCTTCCTAGCCCTGACTTCCAT
ACACTCTGCCTTCAACAGCTTCAGCTTTTTCGCAGAATCGTCCCCGAAGC
TCTCCTCTCGGTGTATGTTAGACCGGCAGGTAGTTATGTGATGGATCGAT
TGGAGCTGCGGAGGGTTGCATTGTACCCTGGAGGAGATGATGAGTCAGAG
GCAGAAGGCATTCTCATTCTTGTCGGTCATTTTAATGTTCCAGCCGGCTT
GCGAGCCGCCGAGACTGCTCTTTCCGAATTGCAAGTTAAGGTTGTCCCTG
AATGTAAGGCTGTAGTTCTTCCCATGGTTAAACACCCATTTGTTGTTGGT
TTCTTGGTTGCTGAGCTTCCACTGGTGGAGCTCGAAACTTGTGAGAAGGC
TCAAAGTGATAGGTCCGATAATCATGTATCTGCGGAGGAAGTTTATTCAC
TTTCTCCATTTTTGGATTTGGATAAGAAGTCTTGGGAAGTTCAGAGGCTT
CGGGTCAAGGATGAGCCGGTTGGTATGCGCAACTTCACGTCCGATCAAAG
ATCAAATGCTATCGACATTTCACAGTCTCTGGCTATGGCATATGTTATGG
ATCAGAAAGCAATGTTACTTCAGCAATCAACATGGCAAAATAATGTCAGG
ATGAGTAATCTGGTTGAGCAAATCCGTGGTCCACTTTCAAGTATTCAAAC
CTTGAGTAAAATTCTATCTACACAAACAAAGAAAAGCCAGATTTCATATG
ACATTGTTGAGGATATCTTGATGCTAGGTGATCGTCTGAGTGATGTTCTC
CAACAACTCCAAGATGCTGTTTATTTGACAAAAGCTAATATTATGCGCTA
CAATGAAGAAGCAATCAAGAAAATGAATGGTTCTAATCACATACTTGCTG
AGTCAGAAAAAACTCAATTGCTAGATAGTTCCTCAAGGGATGGCTCTGCA
AATAAAATGAATGAAACTGGTGTTGAGCCATTTTCTCTTAGCACTACTGC
CCAGGATATAGAGATGCCCCTACCACCTTTAGCTCTCGCTCCACAACGAC
ACGGAATCAGACCGTGCAATGTTTCTGAAGTATTGGCAGACTTGGTTGAT
ACAATCAGACCTCTTGCTCAGAATCAAAAACGTGTAATAGAACTAAATCA
ATTCTCATCACCTTTGCTAGCTGCTGTAGAAGAACCTGCTTTGCGCCAGG
CTTTCAGCAACCTTATTGAAGGTGCTTTACTGCGTACACGTGTTGGAGGA
AAGGTTGGAATTGTGTCTACTGCTGCACCAGCTGGCGGTTCCCTCGTACT
TATTGATGATGATGGGCCTGATATGCACTATATGACGCAAATGCATTCAC
TCGCACCGTATGGACAAGAACTCTTAGCTGAAGATATGGTTGAAGACAAT
ATGACATGGAACTTTGTTGCTGGGCTTACTATTGCTCGTGAGATACTGGA
GAGTTATGGTTGTGTTGTGCGCATTATATCACCTCGGATCAAAGATGCTC
CGCTTGGAACTGGGGGAACTCTTATAGAACTTTGGCTTCCTATGGAAGTT
GTTAAATCTGATGTATAG
back to top

protein sequence of rna-XM_012716822.1_CaCDCfrontier-NCBI_v1

>rna-XM_012716822.1_CaCDCfrontier-NCBI_v1 ID=rna-XM_012716822.1_CaCDCfrontier-NCBI_v1; Name=rna-XM_012716822.1_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=605bp
MVLLLSSINTHTHTHTIPLTFTFKPHRHPRHPSCFLQTINANPNSDSDDD
PRNNFTTLTLTSTRALASAIRKVSTSPVEFTQRLEKHRSTGLVLPSPDFH
TLCLQQLQLFRRIVPEALLSVYVRPAGSYVMDRLELRRVALYPGGDDESE
AEGILILVGHFNVPAGLRAAETALSELQVKVVPECKAVVLPMVKHPFVVG
FLVAELPLVELETCEKAQSDRSDNHVSAEEVYSLSPFLDLDKKSWEVQRL
RVKDEPVGMRNFTSDQRSNAIDISQSLAMAYVMDQKAMLLQQSTWQNNVR
MSNLVEQIRGPLSSIQTLSKILSTQTKKSQISYDIVEDILMLGDRLSDVL
QQLQDAVYLTKANIMRYNEEAIKKMNGSNHILAESEKTQLLDSSSRDGSA
NKMNETGVEPFSLSTTAQDIEMPLPPLALAPQRHGIRPCNVSEVLADLVD
TIRPLAQNQKRVIELNQFSSPLLAAVEEPALRQAFSNLIEGALLRTRVGG
KVGIVSTAAPAGGSLVLIDDDGPDMHYMTQMHSLAPYGQELLAEDMVEDN
MTWNFVAGLTIAREILESYGCVVRIISPRIKDAPLGTGGTLIELWLPMEV
VKSDV
back to top

mRNA from alignment at chr6:8588111..8594010-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_012716822.1_CaCDCfrontier-NCBI_v1 ID=rna-XM_012716822.1_CaCDCfrontier-NCBI_v1; Name=rna-XM_012716822.1; organism=Cicer arietinum; type=mRNA; length=5900bp; location=Sequence derived from: chr6:8588111..8594010- (Cicer arietinum
ATAGTATATTACATAACTAACTAATCACTCTGTTAGTAGTTGGTTGTATT GAATATTCGTTCATATGGTGTAGCCAAATGGTGCTTCTACTCTCTTCAAT CAACACTCACACTCACACTCACACTATCCCACTCACTTTCACCTTCAAAC CCCACCGTCACCCTCGCCACCCCTCTTGTTTCCTCCAAACCATCAACGCC AACCCTAACTCCGATTCCGATGACGACCCCCGCAACAACTTCACCACTCT CACCCTCACTTCCACCCGCGCCCTCGCCTCCGCCATTCGTAAAGTCTCCA CTATATATATATATATATATATATAATTTTTTTTTTACATTCATTTAATT TTTAAATTTTTGATACCATCAATATTTTACATCTATTATATTATAGTATC TCTATTTCTTTCTCATTCCGAAGATATCACAAATTTGTATAATGTCTAAA AGTAACAATTTTTCAAAAGAGAAACAGCAAAATGGTCAAGAACTTCCGTA TTTTTTAAATAATAATAATTTAATAACATTAAATTAGATTAGATGGATAA GATAAGTTTGTCATTATTTGTGTGGTTGTTTTATATATTTTCTTTATTTC TCCGCAGTTGTCGGGCGATAGTATATTACATAACTAACTAATCACTCTGT TAGTAGTTGGTTGTATTGAATATTCGTTCATATGGTGTAGCCAAATGGTG CTTCTACTCTCTTCAATCAACACTCACACTCACACTCACACTATCCCACT CACTTTCACCTTCAAACCCCACCGTCACCCTCGCCACCCCTCTTGTTTCC TCCAAACCATCAACGCCAACCCTAACTCCGATTCCGATGACGACCCCCGC AACAACTTCACCACTCTCACCCTCACTTCCACCCGCGCCCTCGCCTCCGC CATTCGTAAAGTCTCCACCTCACCCGTTGAGTTCACTCAGCGACTCGAGA AACATCGCTCAACCGGACTCGTTCTTCCTAGCCCTGACTTCCATACACTC TGCCTTCAACAGCTTCAGCTTTTTCGCAGAATCGTCCCCGAAGCTCTCCT CTCGGTTCGTACCTCATTAATTGTTTCTTTTATGTCTTCAATCCTATCTC TATTTTAAATTAGGGTTTATGGTAATTTGATTCCTGAACGGTGTCGTTTG TGTTGTTTTGTGCTGTGCTCTACAGGTGTATGTTAGACCGGCAGGTAGTT ATGTGATGGATCGATTGGAGCTGCGGAGGGTTGCATTGTACCCTGGAGGA GATGATGAGTCAGAGGCAGAAGGCATTCTCATTCTTGTCGGTCATTTTAA TGTTCCAGCCGGCTTGCGAGCCGCCGAGACTGCTCTTTCCGAATTGCAAG TGTGTTGGTCATTCTGCTCTGTTATATTATGGTGTCTCTGTTCCATTATT ATTGTTATTAAACTACCAATTTAGTTCCTCAAGTATCGGTCTCTCATGCA TTCATTCAATTAAATATATATGAAAATAATAAGTAGTGTCTTGGTATTAT TATAAATTTATAACTATTCCTTCCACTCCTAAACTTTGGTATTTTTAAGG TATTTGCACATAGAAAAAGAAAATATTTAATTGATGTGTATTGAACCAAA ATACCCTTATTCTATTCATTAAATACTTTAGTAATTTCTATATTTATGTA TCTAATCTACTCCCAATAGTTGGAAGAAAAGGATCAATTATATCTTGGAT TTCTAAAAACCAAATGTTTTAAGATAAAATTAAACTACTTAGACTACCAA AGATTAGGAATGGAGGAAGTAGTCCCTACTGTATATGAAAATTTCTAACT GTAATCGCTGGTATCTTGTCAATACATAAACAGATGTGACTAAAGGGACC AGTTTTCATATACTTTAGGGACTATTTATAATTTAAGTACTACTTATTAT TTTCAAACACTTTTAAGTACTGAGTAGCATAGAGAGTGATACTTCGGGGA CTAAATTGAGGATTTACTCTTATTGTTGTTGGTTAGGATAGACCTCAATA TCAGTGTGGATGTTAATTGTAGGTTAAGGTTGTCCCTGAATGTAAGGCTG TAGTTCTTCCCATGGTTAAACACCCATTTGTTGTTGGTTTCTTGGTTGCT GAGCTTCCACTGGTGGAGCTCGAAACTTGTGAGAAGGCTCAAAGTGATAG GTCCGATAATCATGTATCTGCGGAGGAAGTTTATTCACTTTCTCCATTTT TGGATTTGGATAAGAAGTCTTGGGAAGTTCAGAGGCTTCGGGTCAAGGAT GAGCCGGTTGGTATGCGCAACTTCACGTCCGATCAAAGATCAAATGCTAT CGACATTTCACAGTCTCTGGCTATGGCATATGTTATGGATCAGGTTTATA TACTTCATCTGGCTTTTTTTCAAATAATGGCAGGAGCTCATTACTCTTTG AATATGAAATGCTAGAGAGATGTGCTTGTCACACTGCTTGGATTTTGTGG GAGTTGCTTTCACTTTTGTATTTCTTAAAATATCCTTTTTTTTATTTGTG CTTTCAAAGTTATTTCAGTTTAAAATCATTTAATCTATCACTTTGAGTTA GACCAACAGACTGTTTTATTTTAGCATGCAATGCAAGTTCCTTAAATTGA TTTCTCTTTAATTGTTTGTTGTATGACTTCATGATAGTTATAAGGATAGT TTTTGATACTTGGCATGGGCCTAAATTTCTGGCTCATGAGTGTCTGTTCT CCTTTTGCAGAAAGCAATGTTACTTCAGCAATCAACATGGCAAAATAATG TCAGGATGAGTAATCTGGTTGAGCAAGTATGTATTATCGGCTGTTATTCC ATTTCTGTAATCTCTTTATTCTTAGCCTTAGCCTGTTCTAATTTTTCTTT CTTCAAATTACACACCAGATCCGTGGTCCACTTTCAAGTATTCAAACCTT GAGTAAAATTCTATCTACACAAACAAAGAAAAGCCAGGTTTGTAAAATCT CTAAATAGATGAGTTTATTTTTTATTATAACCATAAAAAACTATTTCATT GCCATATATGCCAGCCCGTAAGTCACTCTTTCTTTTAAACCTGACTAAAC TTTACTATGTCAGTTCTATTAAGAGTGGTTAGTAAGCCAGGCCAACCAAT AAGTTGATGAAGTTATTCATACCTTATGTTATTGGCTATCAACAATGTCC TAAAATAGATACTTTTGCAGATTTCATATGACATTGTTGAGGATATCTTG ATGCTAGGTGATCGTCTGAGTGATGTTCTCCAACAACTCCAAGATGCTGT TTATTTGACAAAAGTACTTCTCTCTCTCGCACTTATTAATTTTATATACC AATAATCAATTAACGTGCATTGGATTTTTTATCTCCATTTTATTGTATGT TGTCCTATGTACTTATAAAATGGTGTTTGATGTGTAAACAAATTCTTTTG GTTGATTGATGTAAAAGAAAATTGTTGAAACATGGTGAAGCAGTCATGAT GACACTAGTAATTATACACAGGAAGGGGTCCTTTTCTAGGTTGAATTACA GCCAAACCATATGGCTGCTCGCTGCCGGGCCCTTGGTGTTTCTCCCAGAA AGGCAGATGCAGCAGTGGGTTATTATTTCATTATAGGAAAAAGCCTATTA TTGTTCAGCTATATTTTGTGTACTAATTTAGAAGCATCCCTTGGATGGAT ACAAACTCTGCAATTTTTTGAACCCATAATTTTTATAATTTTTTCTCATA TCACTAGCTTGTTTTACTTCAAACTCGAATTGTCAATTAAAAAAATAGCT TGTTTTACTCAAATATAATTATAATGATGTTATATATGGGTGTTAATTAT CCAAAAGGTAAAAATATTTAGATACATCCTTTATATGCCTGTCAGTATCT ACCTGCGCTGAAATTTGAGTTTTGGCATTTTTATCCTGACTGAAGAGATT CTTTCTTCAATTTTAACATCTTCGAAAAAATATTTCGGTGAAATGACGTT TCTACTGAACAGGTATCTATTGAGGGAATATTTGCTAAGCATTTTAGAAA TAAGAAAATAATGCAGGTTGTAGAAATCAATGCGTCTGATGTACAATTTT TGTCCAATGTGCAGGCTAATATTATGCGCTACAATGAAGAAGCAATCAAG AAAATGAATGGTTCTAATCACATACTTGCTGAGTCAGAAAAAACTCAATT GCTAGATAGTTCCTCAAGGGATGGCTCTGCAAATAAAATGAATGAAACTG GTGTTGAGCCATTTTCTCTTAGCACTACTGCCCAGGATATAGAGATGCCC CTACCACCTTTAGCTCTCGCTCCACAACGACACGGAATCAGGTAGGTTTG GTTGGTTGATTAATAAAAATGCCTCTTTTTTTATAATGTTGTAATTTTGT ACCACCTATGTAAATATATATTCCATTCTGTTAATTCTGTTGTGTTATAA ATTCAAATGTTGCATCAATAATGTCATGTATGTTGATTTTCTCTCATTGC CTTTTAGGTGTCTTCTTTTTGGTGTTTAGTTATATATGCTTTTCTCTTTC CTATAAACATTCAGATGATTTGTGCATGTCCTTATGCTTTTTTGTTGATG TCAGGAAGACCGTGCAATGTTTCTGAAGTATTGGCAGACTTGGTTGATAC AATCAGACCTCTTGCTCAGAATCAAAAACGTGTAATAGAACTAAATCAAT TCTCATCACCTTTGCTAGCTGCTGTAGAAGAACCTGCTTTGCGCCAGGCT TTCAGCAACCTTATTGAAGGTGCTTTACTGCGTACACGTGTTGGAGGAAA GGTTGGAATTGTGTCTACTGCTGCACCAGCTGGCGGTTCCCTCGTACTTA TTGATGATGATGGGCCTGATATGCACTATATGGTAACTTCAGTTACTCCC TTTATCTCCTTTGCTTATGCAGTTTCCTTTTTAACAAACTAGAAATTGTG TCATCCATCTAAATTGTAAAGTAGATTAGAAAACATCCTCATGACCCGTG GGGAAATTAGGAACATTTAATTCCTCGGGTTGGATAGACAGAACATACAG CTGATCCCATTTGAGGAAGTTAGTGCATTTTATTTAGGATGTATTAATGT GAGAAAAAACTGCAGCTCTGCCCCACGTATTGTTTGCAACTTTGCATGCT TCACAGTAATATTTCAATTAAGTCTATGAAGATGTGGGTATCCATAAAAT GACCCTAATATCCTAGACATTCAAACATTTTCTTTCTGATACATGGTATC TTAAAGATTTAAACTTATTATGATGATATCTTTCAAACCTAGGAAGCCCT TCACCTCAAGCCCACCCGTAGCCTCTATTCAAACAATTCTTTGATTGAGT ACTTTGTTGCAAGGGGTTTGTGAAAATGGAAAATAATCATTGCTTTTGAG CTTGTCTGCAGACGCAAATGCATTCACTCGCACCGTATGGACAAGAACTC TTAGCTGAAGATATGGTTGAAGACAATATGACATGGAACTTTGTTGCTGG GCTTACTATTGCTCGTGAGATACTGGAGAGTTATGGTTGTGTTGTGCGCA TTATATCACCTCGGATCAAAGATGCTCCGCTTGGAACTGGGGGAACTCTT ATAGAACTTTGGCTTCCTATGGAAGTTGTTAAATCTGATGTATAGAGCAT GAGTTTGAAGTTACGTGAAAGATAAATTGATACACTCCCAAACAGTTCCA CCTCACAGCACCTGAGAGTTGAGAAACTGGCCAGAATAAGAATGTATGGT AAATATTACTAATTCCTTCTTTATCATTGCTGAAGATATGTATCCAGTTC TGTATATAGCTCGTAAGATTTTTTGGTGCATAGTCAATTTTATGATATTG TTGATAATATCACGTAATGTAAACAATGGAAATTTTTTTTGAAGAAATGT AAACAATGTATTACAATCATATAAAAAGGTACGCGGTTTATGAGTCTGTA
back to top

Coding sequence (CDS) from alignment at chr6:8588111..8594010-

>rna-XM_012716822.1_CaCDCfrontier-NCBI_v1 ID=rna-XM_012716822.1_CaCDCfrontier-NCBI_v1; Name=rna-XM_012716822.1; organism=Cicer arietinum; type=CDS; length=1818bp; location=Sequence derived from: chr6:8588111..8594010- (Cicer arietinum
ATGGTGCTTCTACTCTCTTCAATCAACACTCACACTCACACTCACACTAT
CCCACTCACTTTCACCTTCAAACCCCACCGTCACCCTCGCCACCCCTCTT
GTTTCCTCCAAACCATCAACGCCAACCCTAACTCCGATTCCGATGACGAC
CCCCGCAACAACTTCACCACTCTCACCCTCACTTCCACCCGCGCCCTCGC
CTCCGCCATTCGTAAAGTCTCCACCTCACCCGTTGAGTTCACTCAGCGAC
TCGAGAAACATCGCTCAACCGGACTCGTTCTTCCTAGCCCTGACTTCCAT
ACACTCTGCCTTCAACAGCTTCAGCTTTTTCGCAGAATCGTCCCCGAAGC
TCTCCTCTCGGTGTATGTTAGACCGGCAGGTAGTTATGTGATGGATCGAT
TGGAGCTGCGGAGGGTTGCATTGTACCCTGGAGGAGATGATGAGTCAGAG
GCAGAAGGCATTCTCATTCTTGTCGGTCATTTTAATGTTCCAGCCGGCTT
GCGAGCCGCCGAGACTGCTCTTTCCGAATTGCAAGTTAAGGTTGTCCCTG
AATGTAAGGCTGTAGTTCTTCCCATGGTTAAACACCCATTTGTTGTTGGT
TTCTTGGTTGCTGAGCTTCCACTGGTGGAGCTCGAAACTTGTGAGAAGGC
TCAAAGTGATAGGTCCGATAATCATGTATCTGCGGAGGAAGTTTATTCAC
TTTCTCCATTTTTGGATTTGGATAAGAAGTCTTGGGAAGTTCAGAGGCTT
CGGGTCAAGGATGAGCCGGTTGGTATGCGCAACTTCACGTCCGATCAAAG
ATCAAATGCTATCGACATTTCACAGTCTCTGGCTATGGCATATGTTATGG
ATCAGAAAGCAATGTTACTTCAGCAATCAACATGGCAAAATAATGTCAGG
ATGAGTAATCTGGTTGAGCAAATCCGTGGTCCACTTTCAAGTATTCAAAC
CTTGAGTAAAATTCTATCTACACAAACAAAGAAAAGCCAGATTTCATATG
ACATTGTTGAGGATATCTTGATGCTAGGTGATCGTCTGAGTGATGTTCTC
CAACAACTCCAAGATGCTGTTTATTTGACAAAAGCTAATATTATGCGCTA
CAATGAAGAAGCAATCAAGAAAATGAATGGTTCTAATCACATACTTGCTG
AGTCAGAAAAAACTCAATTGCTAGATAGTTCCTCAAGGGATGGCTCTGCA
AATAAAATGAATGAAACTGGTGTTGAGCCATTTTCTCTTAGCACTACTGC
CCAGGATATAGAGATGCCCCTACCACCTTTAGCTCTCGCTCCACAACGAC
ACGGAATCAGACCGTGCAATGTTTCTGAAGTATTGGCAGACTTGGTTGAT
ACAATCAGACCTCTTGCTCAGAATCAAAAACGTGTAATAGAACTAAATCA
ATTCTCATCACCTTTGCTAGCTGCTGTAGAAGAACCTGCTTTGCGCCAGG
CTTTCAGCAACCTTATTGAAGGTGCTTTACTGCGTACACGTGTTGGAGGA
AAGGTTGGAATTGTGTCTACTGCTGCACCAGCTGGCGGTTCCCTCGTACT
TATTGATGATGATGGGCCTGATATGCACTATATGACGCAAATGCATTCAC
TCGCACCGTATGGACAAGAACTCTTAGCTGAAGATATGGTTGAAGACAAT
ATGACATGGAACTTTGTTGCTGGGCTTACTATTGCTCGTGAGATACTGGA
GAGTTATGGTTGTGTTGTGCGCATTATATCACCTCGGATCAAAGATGCTC
CGCTTGGAACTGGGGGAACTCTTATAGAACTTTGGCTTCCTATGGAAGTT
GTTAAATCTGATGTATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR036890HATPase_C_sf