rna-XM_014637994.2
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_014637994.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TIA3|A0A1S3TIA3_VIGRR (uncharacterized protein LOC106755780 OS=Vigna radiata var. radiata OX=3916 GN=LOC106755780 PE=4 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 3.304e-77 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 Query: 1 MSTLVRNTTLTFSRRYRYELLGLQGNKDKMLKSISYRRRRAKQRKVFLTTYKLSSLDNNTFVEPQKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSCASRPAISDGPSPVPNRKNI 116 MSTLVRNTTLTFSRRYRYELLGLQGNKDKMLKSISYRRRRAKQRKVFLTTYKLSSLDNNTFVEPQKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSCASRPAISDGPSPVPNRKNI Sbjct: 1 MSTLVRNTTLTFSRRYRYELLGLQGNKDKMLKSISYRRRRAKQRKVFLTTYKLSSLDNNTFVEPQKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSCASRPAISDGPSPVPNRKNI 116
BLAST of rna-XM_014637994.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SBN8|A0A0S3SBN8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G135700 PE=4 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 6.781e-75 Identity = 112/116 (96.55%), Postives = 116/116 (100.00%), Query Frame = 0 Query: 1 MSTLVRNTTLTFSRRYRYELLGLQGNKDKMLKSISYRRRRAKQRKVFLTTYKLSSLDNNTFVEPQKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSCASRPAISDGPSPVPNRKNI 116 MSTLVRNTTLTFSRRYRYE+LGLQGNKDKMLKSISYRRRRAKQRKVFLTTYKLSSLD+NTFVEPQKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSCASRPAISDGPSP+PNRKN+ Sbjct: 1 MSTLVRNTTLTFSRRYRYEVLGLQGNKDKMLKSISYRRRRAKQRKVFLTTYKLSSLDSNTFVEPQKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSCASRPAISDGPSPLPNRKNL 116
BLAST of rna-XM_014637994.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9V599|A0A0L9V599_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g109200 PE=4 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 6.781e-75 Identity = 112/116 (96.55%), Postives = 116/116 (100.00%), Query Frame = 0 Query: 1 MSTLVRNTTLTFSRRYRYELLGLQGNKDKMLKSISYRRRRAKQRKVFLTTYKLSSLDNNTFVEPQKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSCASRPAISDGPSPVPNRKNI 116 MSTLVRNTTLTFSRRYRYE+LGLQGNKDKMLKSISYRRRRAKQRKVFLTTYKLSSLD+NTFVEPQKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSCASRPAISDGPSP+PNRKN+ Sbjct: 1 MSTLVRNTTLTFSRRYRYEVLGLQGNKDKMLKSISYRRRRAKQRKVFLTTYKLSSLDSNTFVEPQKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSCASRPAISDGPSPLPNRKNL 116
BLAST of rna-XM_014637994.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6LH09|A0A4D6LH09_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g2343 PE=4 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 6.547e-64 Identity = 101/106 (95.28%), Postives = 103/106 (97.17%), Query Frame = 0 Query: 1 MSTLVRNTTLTFSRRYRYELLGLQGNKDKMLKSISYRRRRAKQRKVFLTTYKLSSLDNNTFVEPQKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSCASRPAISDG 106 MSTLVRNTTLTFSRRYRYE+LGLQG KDKMLKSISYRRRRAKQRK+FLTTYKLSSLD NTFVEPQKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSCASR AISDG Sbjct: 1 MSTLVRNTTLTFSRRYRYEVLGLQG-KDKMLKSISYRRRRAKQRKIFLTTYKLSSLDTNTFVEPQKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSCASRSAISDG 105
BLAST of rna-XM_014637994.2 vs. UniProtKB/TrEMBL
Match: tr|V7AKM9|V7AKM9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G113700g PE=4 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 7.340e-55 Identity = 107/116 (92.24%), Postives = 111/116 (95.69%), Query Frame = 0 Query: 1 MSTLVRNTTLTFSRRYRYELLGLQGNKDKMLKSISYRRRRAKQRKVFLTTYKLSSLDNNTFVEPQKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSCASRPAISDGPSPVPNRKNI 116 MSTLVRNTTLTFSR+YRYELLGLQG KDKMLKSISYRRRRAKQR++FLTTYKLSSLD+NTFVEPQKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSC SR AISDG SPVPNRKN Sbjct: 1 MSTLVRNTTLTFSRKYRYELLGLQG-KDKMLKSISYRRRRAKQRQIFLTTYKLSSLDSNTFVEPQKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSCGSRSAISDGSSPVPNRKNF 115
BLAST of rna-XM_014637994.2 vs. UniProtKB/TrEMBL
Match: tr|A0A072UKK4|A0A072UKK4_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_4g046147 PE=4 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.723e-44 Identity = 86/115 (74.78%), Postives = 97/115 (84.35%), Query Frame = 0 Query: 1 MSTLVRNTTLTFSRRYRYELLGLQGNKDKMLKSISYRRRRAKQRKVFLTTYKLSSLDNNTFVE-PQKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSCASRPAISDGPSPVPNRK 114 M+TLVRNTTLTFSRR YELLGLQG K+K LKS+SYRRRRAKQRK+FLTTYKLSSL NTFVE P++P K+K+VAVKVKKI+ SVL+FMR GS RSC S+ AIS SPVP RK Sbjct: 1 MNTLVRNTTLTFSRRQGYELLGLQG-KEKTLKSVSYRRRRAKQRKIFLTTYKLSSL--NTFVEQPKRP--KIKRVAVKVKKIVNSVLLFMRTGSFRSCNSKSAIS-ASSPVPIRK 109
BLAST of rna-XM_014637994.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371EHJ0|A0A371EHJ0_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_55818 PE=4 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.489e-43 Identity = 94/113 (83.19%), Postives = 101/113 (89.38%), Query Frame = 0 Query: 1 MSTLVRNTTLTFSRRYRYELLGLQGNKDKMLKSISYRRRRAKQRKVFLTTYKLSSLDNN----TFVEPQKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSCASRPAISDGPSP 109 MSTLVRNTTL+FSRRYRYE+LGLQG KDKMLKSISYRRRRAKQR++FLTTYKLSS++NN TFVEPQ+ KLKLKKVAVKVKKIMASVLMFMRVGS RSC SR AIS SP Sbjct: 1 MSTLVRNTTLSFSRRYRYEILGLQG-KDKMLKSISYRRRRAKQRQIFLTTYKLSSINNNNNNNTFVEPQRHKLKLKKVAVKVKKIMASVLMFMRVGSFRSCTSRSAISATSSP 112
BLAST of rna-XM_014637994.2 vs. UniProtKB/TrEMBL
Match: tr|C6SXD6|C6SXD6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100305963 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 3.364e-43 Identity = 96/116 (82.76%), Postives = 104/116 (89.66%), Query Frame = 0 Query: 1 MSTLVRNTTLTFSRRYRYELLGLQGNKDKMLKSISYRRRRAKQRKVFLTTYKLSSLDNNTFVEP-QKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSCASRPAISDGPSPVPNRKN 115 MSTLVRNTTLTFSRR RYELLGLQG KDKM+KSISYRRRRAKQR++FLTTYKLSSL++NTF EP QKPKLKLKKVAVKVKKI+ASVLMFMRVGS RSC+SR IS + PNRKN Sbjct: 1 MSTLVRNTTLTFSRRNRYELLGLQG-KDKMVKSISYRRRRAKQRQIFLTTYKLSSLNSNTFGEPTQKPKLKLKKVAVKVKKIVASVLMFMRVGSFRSCSSRSQIS---ATSPNRKN 112
BLAST of rna-XM_014637994.2 vs. UniProtKB/TrEMBL
Match: tr|C6T3F1|C6T3F1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100527140 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.401e-43 Identity = 96/116 (82.76%), Postives = 102/116 (87.93%), Query Frame = 0 Query: 1 MSTLVRNTTLTFSRRYRYELLGLQGNKDKMLKSISYRRRRAKQRKVFLTTYKLSSLDNNTFVEPQKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSCASRPAISDGPSPVPNRKNI 116 MSTLVRN TLTFSRR RYELLGLQG KDKM+KSISYRRRRAKQR++FLTTYKLSSL++NTFVEPQKPKLKLKKVAVKVKKI+ SVLMFMRVGS RSC SR IS S PNRKN Sbjct: 1 MSTLVRNATLTFSRRNRYELLGLQG-KDKMVKSISYRRRRAKQRQIFLTTYKLSSLNSNTFVEPQKPKLKLKKVAVKVKKIVTSVLMFMRVGSFRSCGSRSQIS---STSPNRKNF 112
BLAST of rna-XM_014637994.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2RJ19|A0A0B2RJ19_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_033976 PE=4 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.401e-43 Identity = 96/116 (82.76%), Postives = 102/116 (87.93%), Query Frame = 0 Query: 1 MSTLVRNTTLTFSRRYRYELLGLQGNKDKMLKSISYRRRRAKQRKVFLTTYKLSSLDNNTFVEPQKPKLKLKKVAVKVKKIMASVLMFMRVGSLRSCASRPAISDGPSPVPNRKNI 116 MSTLVRN TLTFSRR RYELLGLQG KDKM+KSISYRRRRAKQR++FLTTYKLSSL++NTFVEPQKPKLKLKKVAVKVKKI+ SVLMFMRVGS RSC SR IS S PNRKN Sbjct: 1 MSTLVRNATLTFSRRNRYELLGLQG-KDKMVKSISYRRRRAKQRQIFLTTYKLSSLNSNTFVEPQKPKLKLKKVAVKVKKIVTSVLMFMRVGSFRSCGSRSQIS---STSPNRKNF 112 The following BLAST results are available for this feature:
BLAST of rna-XM_014637994.2 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot) Total hits: 0
BLAST of rna-XM_014637994.2 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11) Total hits: 0
BLAST of rna-XM_014637994.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL) Total hits: 10
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_014637994.2_VrVC1973A-SNU_v1 ID=rna-XM_014637994.2_VrVC1973A-SNU_v1; Name=rna-XM_014637994.2; organism=Vigna radiata; type=mRNA; length=351bpback to top protein sequence of rna-XM_014637994.2_VrVC1973A-SNU_v1 >rna-XM_014637994.2_VrVC1973A-SNU_v1 ID=rna-XM_014637994.2_VrVC1973A-SNU_v1; Name=rna-XM_014637994.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=116bpback to top mRNA from alignment at chr02:10898949..10899644+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_014637994.2_VrVC1973A-SNU_v1 ID=rna-XM_014637994.2_VrVC1973A-SNU_v1; Name=rna-XM_014637994.2; organism=Vigna radiata; type=mRNA; length=696bp; location=Sequence derived from: chr02:10898949..10899644+ (Vigna radiataback to top Coding sequence (CDS) from alignment at chr02:10898949..10899644+ >rna-XM_014637994.2_VrVC1973A-SNU_v1 ID=rna-XM_014637994.2_VrVC1973A-SNU_v1; Name=rna-XM_014637994.2; organism=Vigna radiata; type=CDS; length=351bp; location=Sequence derived from: chr02:10898949..10899644+ (Vigna radiataback to top |