rna-XM_014638057.2
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_014638057.2 vs. Araport11
Match: AT5G65030.1 (| nitric oxide synthase-interacting protein | Chr5:25975697-25976305 REVERSE LENGTH=202 | 201606) HSP 1 Score: 96.6709 bits (239), Expect = 5.912e-25 Identity = 61/199 (30.65%), Postives = 108/199 (54.27%), Query Frame = 0 Query: 6 KVSSFSCELRIIQAQNVQSLKSTKNLFVRVYLPSGTDKRIQLSTKKVSSNMKHVPFWNESFSLDCSCPQELLESLRKERVVLELRQSKIWG-------SHVVAKGDIPWTEIVESPKMEFKEWVKMDLMSGSDEDDDADFKAPQLQVEIKVVVEMESNKRKRLNKKWDECGCKHGHDVYACCSAEDYDIFALGAVLEAF 197 K+ S C++RI++A+NV+ LFVR YL +G +++I+++T+++SS + W++SF L+C + ++ L+++RVV ELR+ KI S VV +G++ W + ESP ME + V M +D+ ++ ++++ + EME K +KK ++ C CS DY+ FAL L+ Sbjct: 7 KLRSLKCQVRIVEARNVEIKSQASTLFVRFYLSAGHNRKIEVNTRELSSKSDQL-MWDQSFGLECQGDEAAVKELKQQRVVFELRRKKISTFLRKSSKSEVVGRGEVSWESVFESPGMEIERLVVMGESKNWVLEDERPL-LLKIALKVQALEEMEKMLIKN-DKKTEKLCCVCSSRDCGSCSCLDYEAFALVCALDCI 202
BLAST of rna-XM_014638057.2 vs. Araport11
Match: AT5G10210.1 (| nitric oxide synthase-interacting protein | Chr5:3206236-3206829 FORWARD LENGTH=197 | 201606) HSP 1 Score: 90.8929 bits (224), Expect = 9.918e-23 Identity = 61/205 (29.76%), Postives = 104/205 (50.73%), Query Frame = 0 Query: 1 MDQFHKVSSFSCELRIIQAQNVQSLKSTKNLFVRVYLPSGTDKRIQLSTKKVSSNMK-HVPFWNESFSLDCSCPQELLESLRKERVVLELRQSKI------WG-SHVVAKGDIPWTEIVESPKMEFKEWVKMDLMSGSDEDDDADFKAPQLQVEIKVVVEMESNKRKRLNKKWDECGCKHGHDVYACCSAEDYDIFALGAVLEAF 197 M + S E++I++A+NV+ S LFVR YL +G + +I+L+T ++ S V WN+SF L+C + +E L+++ VV ELR+ K W S +V +G I W ++E+ ME + +V MD + +D D P L +K+ ++++++K + D C CK C+ DY+ F + L Sbjct: 1 MGIVENIRSLKFEVKIVEARNVELKSSPTTLFVRFYLHAGNNSKIELNTPEIRSRSDCEVISWNQSFGLECQGNETAVEELKQQSVVFELRRRKTTPFLKKWSKSELVGRGKIFWKSVIETDGMEIERFVVMD-ETKDHVLEDCDKHKPLL---LKIALKVQASKIVNTKRVEDLCECKDCRT----CNCVDYEAFVVACALAGI 197
BLAST of rna-XM_014638057.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TID9|A0A1S3TID9_VIGRR (uncharacterized protein LOC106755841 OS=Vigna radiata var. radiata OX=3916 GN=LOC106755841 PE=4 SV=1) HSP 1 Score: 407.527 bits (1046), Expect = 7.754e-144 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 Query: 1 MDQFHKVSSFSCELRIIQAQNVQSLKSTKNLFVRVYLPSGTDKRIQLSTKKVSSNMKHVPFWNESFSLDCSCPQELLESLRKERVVLELRQSKIWGSHVVAKGDIPWTEIVESPKMEFKEWVKMDLMSGSDEDDDADFKAPQLQVEIKVVVEMESNKRKRLNKKWDECGCKHGHDVYACCSAEDYDIFALGAVLEAF 197 MDQFHKVSSFSCELRIIQAQNVQSLKSTKNLFVRVYLPSGTDKRIQLSTKKVSSNMKHVPFWNESFSLDCSCPQELLESLRKERVVLELRQSKIWGSHVVAKGDIPWTEIVESPKMEFKEWVKMDLMSGSDEDDDADFKAPQLQVEIKVVVEMESNKRKRLNKKWDECGCKHGHDVYACCSAEDYDIFALGAVLEAF Sbjct: 1 MDQFHKVSSFSCELRIIQAQNVQSLKSTKNLFVRVYLPSGTDKRIQLSTKKVSSNMKHVPFWNESFSLDCSCPQELLESLRKERVVLELRQSKIWGSHVVAKGDIPWTEIVESPKMEFKEWVKMDLMSGSDEDDDADFKAPQLQVEIKVVVEMESNKRKRLNKKWDECGCKHGHDVYACCSAEDYDIFALGAVLEAF 197
BLAST of rna-XM_014638057.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3S128|A0A0S3S128_PHAAN (C2 domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G418300 PE=4 SV=1) HSP 1 Score: 395.201 bits (1014), Expect = 8.000e-139 Identity = 190/197 (96.45%), Postives = 193/197 (97.97%), Query Frame = 0 Query: 1 MDQFHKVSSFSCELRIIQAQNVQSLKSTKNLFVRVYLPSGTDKRIQLSTKKVSSNMKHVPFWNESFSLDCSCPQELLESLRKERVVLELRQSKIWGSHVVAKGDIPWTEIVESPKMEFKEWVKMDLMSGSDEDDDADFKAPQLQVEIKVVVEMESNKRKRLNKKWDECGCKHGHDVYACCSAEDYDIFALGAVLEAF 197 MDQFHKVSSFSCELRIIQAQNVQSLKSTKNLFVR YLPSGTDKRIQLSTKKVSSNMKHVPFWNESFSLDCSCPQELLESLRKERVVLELRQSKIWGSHVVAKGDIPW EIVESPKME KEWVKMDL+SGSDEDDDADFKAPQ+QVEIKVVVE ESNKRKR+NKKWDECGCKHGHDVYACCSAEDYDIFALGAVLEAF Sbjct: 1 MDQFHKVSSFSCELRIIQAQNVQSLKSTKNLFVRAYLPSGTDKRIQLSTKKVSSNMKHVPFWNESFSLDCSCPQELLESLRKERVVLELRQSKIWGSHVVAKGDIPWKEIVESPKMELKEWVKMDLVSGSDEDDDADFKAPQVQVEIKVVVEKESNKRKRMNKKWDECGCKHGHDVYACCSAEDYDIFALGAVLEAF 197
BLAST of rna-XM_014638057.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6ME88|A0A4D6ME88_VIGUN (C2 domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g3380 PE=4 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 2.948e-106 Identity = 159/198 (80.30%), Postives = 171/198 (86.36%), Query Frame = 0 Query: 1 MDQFHKVSSFSCELRIIQAQNVQSLKSTKNLFVRVYLPSGTDKRIQLSTKKVSSNMKH-VPFWNESFSLDCSCPQELLESLRKERVVLELRQSKIWGSHVVAKGDIPWTEIVESPKMEFKEWVKMDLMSGSDEDDDADFKAPQLQVEIKVVVEMESNKRKRLNKKWDECGCKHGHDVYACCSAEDYDIFALGAVLEAF 197 MDQ HKVSSFSCELRIIQA+NV++LKSTKNLFVRVYLPSGTDKR+QL TK+VSSNMKH VPFWNESFSLDCSCPQELLE LRKERVVLELRQSK+WGSHVV KG+IPW EIVESPKME KEWVK MSGSDEDD A VV + +S RKRLNKKW+ECGC+HGHDVYACCSAEDYD+FALGAVLEAF Sbjct: 1 MDQSHKVSSFSCELRIIQAKNVETLKSTKNLFVRVYLPSGTDKRVQLCTKRVSSNMKHHVPFWNESFSLDCSCPQELLERLRKERVVLELRQSKVWGSHVVGKGEIPWKEIVESPKMELKEWVK---MSGSDEDD----AAEVEVEIKVVVEKKKSVGRKRLNKKWNECGCRHGHDVYACCSAEDYDMFALGAVLEAF 191
BLAST of rna-XM_014638057.2 vs. UniProtKB/TrEMBL
Match: tr|A0A151U8Z3|A0A151U8Z3_CAJCA (C2 domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_019999 PE=4 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 3.271e-100 Identity = 148/204 (72.55%), Postives = 172/204 (84.31%), Query Frame = 0 Query: 1 MDQFHKVSSFSCELRIIQAQNVQSLKSTKNLFVRVYLPSGTDKRIQLSTKKVSSNMKHVPFWNESFSLDCSCPQELLESLRKERVVLELRQSKIWG-SHVVAKGDIPWTEIVESPKMEFKEWVKM-DLMSGSDE----DDDADFKAPQLQVEIKVVVEMESNKRKRLNK-KWDECGCKHGHDVYACCSAEDYDIFALGAVLEAF 197 MD+ KV SFSCELRIIQAQNV S+KSTKNLF R+YLPSG +KRIQL+TKKVSSN KHVPFWNESFSL+CSCPQE LESL+KE +VLELRQSK+WG SHVV +G+IPW I+ESP MEFKEWVKM DL+SG +DDA +APQ+QVEIK+ VE ++N+R+RL K WD+CGCKHGHD +A CS +DYDIFALGAVLEAF Sbjct: 1 MDKSRKVPSFSCELRIIQAQNVDSIKSTKNLFARLYLPSGNNKRIQLNTKKVSSNTKHVPFWNESFSLECSCPQEFLESLKKESLVLELRQSKMWGSSHVVGRGEIPWKAILESPNMEFKEWVKMIDLVSGISTSDCCEDDATLRAPQVQVEIKIRVEKDNNRRRRLIKDNWDKCGCKHGHDQHAWCSVDDYDIFALGAVLEAF 204
BLAST of rna-XM_014638057.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445FMZ3|A0A445FMZ3_GLYSO (C2 domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_047234 PE=4 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 2.992e-99 Identity = 150/198 (75.76%), Postives = 174/198 (87.88%), Query Frame = 0 Query: 1 MDQFHKVSSFSCELRIIQAQNVQSLKSTKNLFVRVYLPSGTDKRIQLSTKKVSSNMKHVPFWNESFSLDCSCPQELLESLRKERVVLELRQSKIWGSHVVAKGDIPWTEIVESPKMEFKEWVKMDLMSGSDEDDDADFKAPQLQVEIKVVVEME-SNKRKRLNKKWDECGCKHGHDVYACCSAEDYDIFALGAVLEAF 197 MD HK+ SFSCELRIIQAQNV+S+KSTKNLF R+YLP+G++KRIQL+TKKVSSN K+VPFWNESF+L+CSCPQE LE L+KE +V+ELRQSKIWGSHVV KG+IPW I+ESP MEFKEWVKMDL+SG D +D FKAPQ+QVEIK+ VE E +N+RKRLN +WDECGCK GHD +A CSAEDYDIFALGAVLEAF Sbjct: 1 MDHSHKLPSFSCELRIIQAQNVESIKSTKNLFTRLYLPAGSNKRIQLNTKKVSSNTKYVPFWNESFNLNCSCPQEFLEGLKKESLVVELRQSKIWGSHVVGKGEIPWKAILESPNMEFKEWVKMDLVSGID-CEDVMFKAPQVQVEIKIQVEKENNNRRKRLNNRWDECGCKQGHDQHAWCSAEDYDIFALGAVLEAF 197
BLAST of rna-XM_014638057.2 vs. UniProtKB/TrEMBL
Match: tr|V7CZW1|V7CZW1_PHAVU (C2 domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G251900g PE=4 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 4.843e-99 Identity = 140/190 (73.68%), Postives = 166/190 (87.37%), Query Frame = 0 Query: 1 MDQFHKVSSFSCELRIIQAQNVQSLKSTKNLFVRVYLPSGTDKRIQLSTKKVSSNMKHVPFWNESFSLDCSCPQELLESLRKERVVLELRQSKIWGSHVVAKGDIPWTEIVESPKMEFKEWVKMDLMSGSDEDDDADFKAPQLQVEIKVVVEMESNKRKRLNKKWDECGCKHGHDVYACCSAEDYDIFAL 190 MD H+VSSFSCELRI+QA+NV+S++STKNLF R+YLP+GT+KRIQL+TKKVS + PFWNESFSLDCSCP+E LESL KERVVLELRQSK+WGS VVAKG+IPW I+ESPKME KEWVKMDL+ GS DDAD+KAPQ++VEIK+VVE ES +RKR+NKKWDECGCK GHD++ACCS +DY I+ L Sbjct: 1 MDHSHRVSSFSCELRIVQAKNVESMQSTKNLFARLYLPAGTNKRIQLNTKKVS----YEPFWNESFSLDCSCPREFLESLWKERVVLELRQSKMWGSQVVAKGEIPWKAILESPKMELKEWVKMDLVRGS---DDADWKAPQVEVEIKIVVEKESERRKRMNKKWDECGCKEGHDLHACCSVDDYAIYVL 183
BLAST of rna-XM_014638057.2 vs. UniProtKB/TrEMBL
Match: tr|I1MYS7|I1MYS7_SOYBN (C2 domain-containing protein OS=Glycine max OX=3847 GN=100807677 PE=4 SV=1) HSP 1 Score: 294.278 bits (752), Expect = 6.585e-99 Identity = 150/198 (75.76%), Postives = 173/198 (87.37%), Query Frame = 0 Query: 1 MDQFHKVSSFSCELRIIQAQNVQSLKSTKNLFVRVYLPSGTDKRIQLSTKKVSSNMKHVPFWNESFSLDCSCPQELLESLRKERVVLELRQSKIWGSHVVAKGDIPWTEIVESPKMEFKEWVKMDLMSGSDEDDDADFKAPQLQVEIKVVVEME-SNKRKRLNKKWDECGCKHGHDVYACCSAEDYDIFALGAVLEAF 197 MD HK+ SFSCELRIIQAQNV+S+KSTKNLF R+YLP+G++KRIQL+TKKVSSN K+VPFWNESF+L+CSCPQE LE L+KE +V+ELRQSKIWGSHVV KG+IPW I ESP MEFKEWVKMDL+SG D +D FKAPQ+QVEIK+ VE E +N+RKRLN +WDECGCK GHD +A CSAEDYDIFALGAVLEAF Sbjct: 1 MDHSHKLPSFSCELRIIQAQNVESIKSTKNLFTRLYLPAGSNKRIQLNTKKVSSNTKYVPFWNESFNLNCSCPQEFLEGLKKESLVVELRQSKIWGSHVVGKGEIPWKAIFESPNMEFKEWVKMDLVSGID-CEDVMFKAPQVQVEIKIQVEKENNNRRKRLNNRWDECGCKQGHDQHAWCSAEDYDIFALGAVLEAF 197
BLAST of rna-XM_014638057.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UAX4|A0A0L9UAX4_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g306100 PE=4 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 1.895e-96 Identity = 136/142 (95.77%), Postives = 139/142 (97.89%), Query Frame = 0 Query: 56 MKHVPFWNESFSLDCSCPQELLESLRKERVVLELRQSKIWGSHVVAKGDIPWTEIVESPKMEFKEWVKMDLMSGSDEDDDADFKAPQLQVEIKVVVEMESNKRKRLNKKWDECGCKHGHDVYACCSAEDYDIFALGAVLEAF 197 MKHVPFWNESFSLDCSCPQELLESLRKERVVLELRQSKIWGSHVVAKGDIPW EIVESPKME KEWVKMDL+SGSDEDDDADFKAPQ+QVEIKVVVE ESNKRKR+NKKWDECGCKHGHDVYACCSAEDYDIFALGAVLEAF Sbjct: 1 MKHVPFWNESFSLDCSCPQELLESLRKERVVLELRQSKIWGSHVVAKGDIPWKEIVESPKMELKEWVKMDLVSGSDEDDDADFKAPQVQVEIKVVVEKESNKRKRMNKKWDECGCKHGHDVYACCSAEDYDIFALGAVLEAF 142
BLAST of rna-XM_014638057.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445HI39|A0A445HI39_GLYSO (C2 domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_037066 PE=4 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 2.471e-94 Identity = 144/200 (72.00%), Postives = 171/200 (85.50%), Query Frame = 0 Query: 1 MDQFHKVSSFSCELRIIQAQNVQSLKSTKNLFVRVYLPSGTDKRIQLSTKKVSSNMKHVPFWNESFSLDCSCPQELLESLRKERVVLELRQSKIWGSHVVAKGDIPWTEIVESPKMEFKEWVKMDLMSGSDEDDDADFKAPQLQVEIKVVV---EMESNKRKRLNKKWDECGCKHGHDVYACCSAEDYDIFALGAVLEAF 197 MD HK+ SFSCELRIIQAQNV+S+K+TKNLF R+YLP+G +KRIQL+TKKVSSN + VPFWNESF+LDCSCPQE LESL+KE +VLELRQ+KI+ SH+V KG+IPW I+ESPKMEFKEWVKMDL+SG + +D FKAPQ+QVEIK+ V +N+RKRLN KWDECGCKHGH +A CSA+DYDI+ALGAVLEAF Sbjct: 1 MDHSHKLPSFSCELRIIQAQNVESIKTTKNLFTRLYLPAGNNKRIQLNTKKVSSNTQCVPFWNESFNLDCSCPQEFLESLKKESLVLELRQNKIFRSHLVGKGEIPWKAILESPKMEFKEWVKMDLVSGISDCEDIMFKAPQVQVEIKIQVEKENNNNNRRKRLNNKWDECGCKHGHGQHAWCSADDYDIYALGAVLEAF 200
BLAST of rna-XM_014638057.2 vs. UniProtKB/TrEMBL
Match: tr|I1LNL1|I1LNL1_SOYBN (C2 domain-containing protein OS=Glycine max OX=3847 GN=100791093 PE=4 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 2.471e-94 Identity = 144/200 (72.00%), Postives = 171/200 (85.50%), Query Frame = 0 Query: 1 MDQFHKVSSFSCELRIIQAQNVQSLKSTKNLFVRVYLPSGTDKRIQLSTKKVSSNMKHVPFWNESFSLDCSCPQELLESLRKERVVLELRQSKIWGSHVVAKGDIPWTEIVESPKMEFKEWVKMDLMSGSDEDDDADFKAPQLQVEIKVVV---EMESNKRKRLNKKWDECGCKHGHDVYACCSAEDYDIFALGAVLEAF 197 MD HK+ SFSCELRIIQAQNV+S+K+TKNLF R+YLP+G +KRIQL+TKKVSSN + VPFWNESF+LDCSCPQE LESL+KE +VLELRQ+KI+ SH+V KG+IPW I+ESPKMEFKEWVKMDL+SG + +D FKAPQ+QVEIK+ V +N+RKRLN KWDECGCKHGH +A CSA+DYDI+ALGAVLEAF Sbjct: 1 MDHSHKLPSFSCELRIIQAQNVESIKTTKNLFTRLYLPAGNNKRIQLNTKKVSSNTQCVPFWNESFNLDCSCPQEFLESLKKESLVLELRQNKIFRSHLVGKGEIPWKAILESPKMEFKEWVKMDLVSGISDCEDIMFKAPQVQVEIKIQVEKENNNNNRRKRLNNKWDECGCKHGHGQHAWCSADDYDIYALGAVLEAF 200 The following BLAST results are available for this feature:
BLAST of rna-XM_014638057.2 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot) Total hits: 0
BLAST of rna-XM_014638057.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11) Total hits: 2
BLAST of rna-XM_014638057.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_014638057.2_VrVC1973A-SNU_v1 ID=rna-XM_014638057.2_VrVC1973A-SNU_v1; Name=rna-XM_014638057.2; organism=Vigna radiata; type=mRNA; length=594bpback to top protein sequence of rna-XM_014638057.2_VrVC1973A-SNU_v1 >rna-XM_014638057.2_VrVC1973A-SNU_v1 ID=rna-XM_014638057.2_VrVC1973A-SNU_v1; Name=rna-XM_014638057.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=197bpback to top mRNA from alignment at chr02:22860230..22861089- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_014638057.2_VrVC1973A-SNU_v1 ID=rna-XM_014638057.2_VrVC1973A-SNU_v1; Name=rna-XM_014638057.2; organism=Vigna radiata; type=mRNA; length=860bp; location=Sequence derived from: chr02:22860230..22861089- (Vigna radiataback to top Coding sequence (CDS) from alignment at chr02:22860230..22861089- >rna-XM_014638057.2_VrVC1973A-SNU_v1 ID=rna-XM_014638057.2_VrVC1973A-SNU_v1; Name=rna-XM_014638057.2; organism=Vigna radiata; type=CDS; length=594bp; location=Sequence derived from: chr02:22860230..22861089- (Vigna radiataback to top |