rna-XM_014638769.2

Transcript Overview
Namerna-XM_014638769.2
Unique Namerna-XM_014638769.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length936
Productuncharacterized LOC106756372
References
External references for this mRNA
DatabaseAccession
GeneID106756372
GenbankXM_014638769.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr02chromosomechr02:11162091..11165283 +Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL102Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0277Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvrvL550Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL1001Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL1073Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivrvL047Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL027Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL248Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvrvL0121Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0336Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL457Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvrvL368Pisum sativum Cameor genome v1aPisum sativum
pvvrvL152Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvrvL449Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL150Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL649Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL652Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvrvL157Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR233Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR241Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR281Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvrvL663Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL667Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvzwsR198Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR202Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR184Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR232Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR219Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR200Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
avjvrvL059Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL095Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL197Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL505Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL021Cicer arietinum
carvrvL487Cicer arietinum
ccavrvL080Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL393Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR196Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR223Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR231Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR239Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR221Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR259Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR187Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR210Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR218Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR226Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL041Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL473Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL504Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL133Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL404Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR196Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR212Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigst.06G131200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigun11g104800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
PvulFLAVERTChr11.1000731Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cc_v2.0_09756.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vfaba.Tiffany.R1.6g004640.1Vicia faba cv. Tiffany genome v1.0Vicia faba
LR48_mrnaVigan08g107100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
jg5702.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.6g006520.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Ca_23282Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vum_06G00880.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Va08G051950.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_11707Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigan.06G133700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
evm.model.Chr11.1023Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.011G114600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_031472Cajanus cajan Asha genome v1.0Cajanus cajan
XM_058878834.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigun11g104800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106756372gene-LOC106756372_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014638769.2-1exon-XM_014638769.2-1_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014638769.2-2exon-XM_014638769.2-2_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014638769.2-3exon-XM_014638769.2-3_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014638769.2-4exon-XM_014638769.2-4_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014494255.1cds-XP_014494255.1_VrVC1973A-SNU_v1Vigna radiataCDS
cds-XP_014494255.1cds-XP_014494255.1_VrVC1973A-SNU_v1_2Vigna radiataCDS
cds-XP_014494255.1cds-XP_014494255.1_VrVC1973A-SNU_v1_3Vigna radiataCDS
cds-XP_014494255.1cds-XP_014494255.1_VrVC1973A-SNU_v1_4Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014638769.2_VrVC1973A-SNU_v1rna-XM_014638769.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014638769.2_VrVC1973A-SNU_v1rna-XM_014638769.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
[Close]
BLAST of rna-XM_014638769.2 vs. Araport11
Match: AT2G20725.1 (| CAAX amino terminal protease family protein | Chr2:8934113-8935426 REVERSE LENGTH=301 | 201606)

HSP 1 Score: 269.24 bits (687), Expect = 2.380e-89
Identity = 150/300 (50.00%), Postives = 197/300 (65.67%), Query Frame = 0 
Query:   23 FHCFHPPNTIYSQQCSPKLRLRCTPFQRHSFKSFC-----------KREEEEEEIPCFS--QGFSALQEEDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILELSGTLVLLKYTAKPRYKFTNFFKKNN-SWSYRNWFLSSALGFGFLALLIFLTSLLADYLYGSKPVSNPIQKEMLLSSGISRVSCVLAYCIFIPLLEEVVYRGFLLTSLASTMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLSSSIVIHSLYNALTLVVS 308
            F C + P T     CS   R R T F+R S  S C           K  +E  +I      +GFS L  E  PWE  N+WS  ALY+F+LHIP SFGGLS+VA    + VLDPQT+ LSL+ +Q++EL+GT++LL+ TAKP+ K  NF K NN +   RNW + SALG G L   IF+TSL+AD L+G K V     +++++S  ++R  C   YC+  P+LEE+VYR FLLTSLAS MEW +A+ ISS +F+A H SGE+F+QLF IGC LG  YSW+GNL+SS+++HSLYNALTL+ S
Sbjct:    9 FSCGNTPVT----NCSE--RRRHTEFRRLSSASTCRPSLICSCLKSKSSQETTQIEQLGNGEGFSVLASEI-PWEDDNIWSTFALYMFSLHIPLSFGGLSIVANILHRQVLDPQTQVLSLVVLQMVELAGTVLLLRTTAKPQCKSINFLKGNNETREGRNWVVGSALGLGCLVGFIFVTSLVADQLFGPKAVHESELEKIMVSGEVARSGCFALYCVVAPILEEIVYRRFLLTSLASRMEWWKALVISSGVFAAGHFSGEDFVQLFGIGCGLGLCYSWSGNLASSVLVHSLYNALTLLFS 301
[Close]
BLAST of rna-XM_014638769.2 vs. Araport11
Match: AT1G14270.1 (| CAAX amino terminal protease family protein | Chr1:4875099-4877195 REVERSE LENGTH=353 | 201606)

HSP 1 Score: 79.337 bits (194), Expect = 2.002e-16
Identity = 84/291 (28.87%), Postives = 122/291 (41.92%), Query Frame = 0 
Query:   44 RCTPFQRHSFKSFC-----KREEEEEEIPCFSQGFSALQEEDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVAL--FNGQPV----LDPQTEALSLLTIQILELSGTLVLLKYTAKP---------RYKFTNFFKKNNSWSYRNWFLSSALGFGFLALLIFLTSLLADYLYGSKPVSNPIQKEMLL----SSGISRVSCVLAYCIFIPLLEEVVYRGFLLTSLASTMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLSSSIVIHSLYNALTLVVSYF 310
            R     R  ++S C     K    E ++   S  +  LQ  + PW     W  ++L  F   + F   GL+ +A+  F G  V    LD + E L L   Q L  +  L ++   AK          RY              + W +   +G       I LT ++        P         LL    SS IS +S V    I  PLLEE V+RGF + SL   +  P A+ ISS  F+  H +   F QLFI+G +LG SY+ T NL + +VIH  +N+  +++  F
Sbjct:   59 RLFTVNRKKWRSACIFNSGKEPGGEGKLQGGSSEWPILQRWEVPWG----WQTVSLTSFACALSFVLTGLTEMAVIPFLGIDVEKLTLDDKAEILFL--DQGLTTAVVLAVIFTVAKTFDPLPEDILRYDLRQPVNLQ-----KGWLVWGGIGLVGAVGAIALTGVVLSVFRTEAPEREVDSLMKLLPLIGSSNISTLSLVGITGILAPLLEETVFRGFFMVSLTKWVPTPIAIIISSAAFALAHFTPGEFPQLFILGSVLGLSYAQTRNLITPMVIHGFWNSGVILLLTF 338
[Close]
BLAST of rna-XM_014638769.2 vs. Araport11
Match: AT1G14270.4 (| CAAX amino terminal protease family protein | Chr1:4875099-4876443 REVERSE LENGTH=227 | 201606)

HSP 1 Score: 75.485 bits (184), Expect = 8.560e-16
Identity = 42/92 (45.65%), Postives = 56/92 (60.87%), Query Frame = 0 
Query:  211 SSGISRVSCVLAYCIFIPLLEEVVYRGFLLTSLASTMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLSSSIVIHSLYNA 302
            SS IS +S V    I  PLLEE V+RGF + SL   +  P A+ ISS  F+  H +   F QLFI+G +LG SY+ T NL + +VIH  +N+
Sbjct:  113 SSNISTLSLVGITGILAPLLEETVFRGFFMVSLTKWVPTPIAIIISSAAFALAHFTPGEFPQLFILGSVLGLSYAQTRNLITPMVIHGFWNS 204
[Close]
BLAST of rna-XM_014638769.2 vs. Araport11
Match: AT1G14270.3 (| CAAX amino terminal protease family protein | Chr1:4875099-4876443 REVERSE LENGTH=227 | 201606)

HSP 1 Score: 75.485 bits (184), Expect = 8.560e-16
Identity = 42/92 (45.65%), Postives = 56/92 (60.87%), Query Frame = 0 
Query:  211 SSGISRVSCVLAYCIFIPLLEEVVYRGFLLTSLASTMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLSSSIVIHSLYNA 302
            SS IS +S V    I  PLLEE V+RGF + SL   +  P A+ ISS  F+  H +   F QLFI+G +LG SY+ T NL + +VIH  +N+
Sbjct:  113 SSNISTLSLVGITGILAPLLEETVFRGFFMVSLTKWVPTPIAIIISSAAFALAHFTPGEFPQLFILGSVLGLSYAQTRNLITPMVIHGFWNS 204
[Close]
BLAST of rna-XM_014638769.2 vs. Araport11
Match: AT1G14270.2 (| CAAX amino terminal protease family protein | Chr1:4875099-4876503 REVERSE LENGTH=247 | 201606)

HSP 1 Score: 75.8702 bits (185), Expect = 1.083e-15
Identity = 42/92 (45.65%), Postives = 56/92 (60.87%), Query Frame = 0 
Query:  211 SSGISRVSCVLAYCIFIPLLEEVVYRGFLLTSLASTMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLSSSIVIHSLYNA 302
            SS IS +S V    I  PLLEE V+RGF + SL   +  P A+ ISS  F+  H +   F QLFI+G +LG SY+ T NL + +VIH  +N+
Sbjct:  133 SSNISTLSLVGITGILAPLLEETVFRGFFMVSLTKWVPTPIAIIISSAAFALAHFTPGEFPQLFILGSVLGLSYAQTRNLITPMVIHGFWNS 224
[Close]
BLAST of rna-XM_014638769.2 vs. Araport11
Match: AT5G60750.1 (| CAAX amino terminal protease family protein | Chr5:24431072-24433199 FORWARD LENGTH=347 | 201606)

HSP 1 Score: 60.077 bits (144), Expect = 5.398e-10
Identity = 43/139 (30.94%), Postives = 72/139 (51.80%), Query Frame = 0 
Query:  168 NWFLSSALG---FGFLALLIFLTSLLADYLYGSKPVS-NPIQKEMLLSSGISRVSCVLAYCIFIPLLEEVVYRGFLLTSLASTMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLSSSIVIHSLYNA 302
            NW L   +G   F F+  L  L   L      S PVS + +++ ++    ++     +   I  P+ EE+V+RGFLL SL   M    A+ +SS+ F+  H + +  L L  +G +LG  ++ + NL  S+++HSL+N 
Sbjct:  201 NWQLDVIIGCFMFPFVNRLSQLNLNLLPLPPTSSPVSLSSVEQSIMARDPVAMALYAVVVSICAPVWEEIVFRGFLLPSLTRYMPVWCAILVSSIAFALAHFNVQRMLPLVFLGVVLGLIFARSRNLLPSMLLHSLWNG 339
[Close]
BLAST of rna-XM_014638769.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TKH5|A0A1S3TKH5_VIGRR (uncharacterized protein LOC106756372 OS=Vigna radiata var. radiata OX=3916 GN=LOC106756372 PE=4 SV=1)

HSP 1 Score: 630.172 bits (1624), Expect = 0.000e+0
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0 
Query:    1 MLLVLGCPYPYAKFVIDDLGTPFHCFHPPNTIYSQQCSPKLRLRCTPFQRHSFKSFCKREEEEEEIPCFSQGFSALQEEDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILELSGTLVLLKYTAKPRYKFTNFFKKNNSWSYRNWFLSSALGFGFLALLIFLTSLLADYLYGSKPVSNPIQKEMLLSSGISRVSCVLAYCIFIPLLEEVVYRGFLLTSLASTMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLSSSIVIHSLYNALTLVVSYFY 311
            MLLVLGCPYPYAKFVIDDLGTPFHCFHPPNTIYSQQCSPKLRLRCTPFQRHSFKSFCKREEEEEEIPCFSQGFSALQEEDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILELSGTLVLLKYTAKPRYKFTNFFKKNNSWSYRNWFLSSALGFGFLALLIFLTSLLADYLYGSKPVSNPIQKEMLLSSGISRVSCVLAYCIFIPLLEEVVYRGFLLTSLASTMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLSSSIVIHSLYNALTLVVSYFY
Sbjct:    1 MLLVLGCPYPYAKFVIDDLGTPFHCFHPPNTIYSQQCSPKLRLRCTPFQRHSFKSFCKREEEEEEIPCFSQGFSALQEEDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILELSGTLVLLKYTAKPRYKFTNFFKKNNSWSYRNWFLSSALGFGFLALLIFLTSLLADYLYGSKPVSNPIQKEMLLSSGISRVSCVLAYCIFIPLLEEVVYRGFLLTSLASTMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLSSSIVIHSLYNALTLVVSYFY 311
[Close]
BLAST of rna-XM_014638769.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SBH6|A0A0S3SBH6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G133700 PE=4 SV=1)

HSP 1 Score: 603.208 bits (1554), Expect = 0.000e+0
Identity = 299/311 (96.14%), Postives = 303/311 (97.43%), Query Frame = 0 
Query:    1 MLLVLGCPYPYAKFVIDDLGTPFHCFHPPNTIYSQQCSPKLRLRCTPFQRHSFKSFCKREEEEEEIPCFSQGFSALQEEDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILELSGTLVLLKYTAKPRYKFTNFFKKNNSWSYRNWFLSSALGFGFLALLIFLTSLLADYLYGSKPVSNPIQKEMLLSSGISRVSCVLAYCIFIPLLEEVVYRGFLLTSLASTMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLSSSIVIHSLYNALTLVVSYFY 311
            MLLVLGCPY YAKFV +DLGTPFHCFHPPNTIYSQ CSPKLRLRCTPFQRHSFKSFCKREEEEEEI  FSQGFSALQEEDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPV+DPQTEALSLLTIQILELSGTLVLLKYTAKP+YKFTNFFKKNNSWSYRNWFLSSALGFGFLALLIFLTSLLADYLYGSKPVSNPIQKEMLLSSGISRVSCVLAYCI IPLLEEVVYRGFLLTSL+STMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNL SSIVIHSLYNA TLVVSYFY
Sbjct:    1 MLLVLGCPYAYAKFVSNDLGTPFHCFHPPNTIYSQLCSPKLRLRCTPFQRHSFKSFCKREEEEEEITPFSQGFSALQEEDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPVIDPQTEALSLLTIQILELSGTLVLLKYTAKPQYKFTNFFKKNNSWSYRNWFLSSALGFGFLALLIFLTSLLADYLYGSKPVSNPIQKEMLLSSGISRVSCVLAYCIVIPLLEEVVYRGFLLTSLSSTMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLYSSIVIHSLYNAFTLVVSYFY 311
[Close]
BLAST of rna-XM_014638769.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9V6C8|A0A0L9V6C8_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g107100 PE=4 SV=1)

HSP 1 Score: 603.208 bits (1554), Expect = 0.000e+0
Identity = 299/311 (96.14%), Postives = 303/311 (97.43%), Query Frame = 0 
Query:    1 MLLVLGCPYPYAKFVIDDLGTPFHCFHPPNTIYSQQCSPKLRLRCTPFQRHSFKSFCKREEEEEEIPCFSQGFSALQEEDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILELSGTLVLLKYTAKPRYKFTNFFKKNNSWSYRNWFLSSALGFGFLALLIFLTSLLADYLYGSKPVSNPIQKEMLLSSGISRVSCVLAYCIFIPLLEEVVYRGFLLTSLASTMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLSSSIVIHSLYNALTLVVSYFY 311
            MLLVLGCPY YAKFV +DLGTPFHCFHPPNTIYSQ CSPKLRLRCTPFQRHSFKSFCKREEEEEEI  FSQGFSALQEEDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPV+DPQTEALSLLTIQILELSGTLVLLKYTAKP+YKFTNFFKKNNSWSYRNWFLSSALGFGFLALLIFLTSLLADYLYGSKPVSNPIQKEMLLSSGISRVSCVLAYCI IPLLEEVVYRGFLLTSL+STMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNL SSIVIHSLYNA TLVVSYFY
Sbjct:    1 MLLVLGCPYAYAKFVSNDLGTPFHCFHPPNTIYSQLCSPKLRLRCTPFQRHSFKSFCKREEEEEEITPFSQGFSALQEEDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPVIDPQTEALSLLTIQILELSGTLVLLKYTAKPQYKFTNFFKKNNSWSYRNWFLSSALGFGFLALLIFLTSLLADYLYGSKPVSNPIQKEMLLSSGISRVSCVLAYCIVIPLLEEVVYRGFLLTSLSSTMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLYSSIVIHSLYNAFTLVVSYFY 311
[Close]
BLAST of rna-XM_014638769.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6LGJ7|A0A4D6LGJ7_VIGUN (CAAX amino terminal protease OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g2309 PE=4 SV=1)

HSP 1 Score: 572.778 bits (1475), Expect = 0.000e+0
Identity = 286/311 (91.96%), Postives = 298/311 (95.82%), Query Frame = 0 
Query:    1 MLLVLGCPYPYAKFVIDDLGTPFHCFHPPNTIYSQQCSPKLRLRCTPFQRHSFKSFCKREEEEEEIPCFSQGFSALQEEDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILELSGTLVLLKYTAKPRYKFTNFFKKNNSWSYRNWFLSSALGFGFLALLIFLTSLLADYLYGSKPVSNPIQKEMLLSSGISRVSCVLAYCIFIPLLEEVVYRGFLLTSLASTMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLSSSIVIHSLYNALTLVVSYFY 311
            MLLVLGCP  YAKFV DDLGTPFHCFHPPNT+YSQQCSPKL LRCTPFQR SFKSFC+REEEEE  P FSQGFSALQE+DSPWESGNVWSNLALYLF+LHIPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILE SGTLVLLKYTAKP+YKF+NFFKKNN+WSYRNWFLSSALGFGFLALL+FLTSLL+D+LYGSKPVSNPIQKEMLL+SGISRVSC LAYCI IPLLEEVVYRGFLLTSL+STMEW QAVAISSVIFSAIHLSGENFLQLFIIG LLGCSYSWTGNLSSSIVIHSLYNALTLVVSYFY
Sbjct:    1 MLLVLGCPSAYAKFVSDDLGTPFHCFHPPNTVYSQQCSPKL-LRCTPFQRPSFKSFCRREEEEEVTP-FSQGFSALQEDDSPWESGNVWSNLALYLFSLHIPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILEFSGTLVLLKYTAKPQYKFSNFFKKNNTWSYRNWFLSSALGFGFLALLVFLTSLLSDFLYGSKPVSNPIQKEMLLNSGISRVSCALAYCIVIPLLEEVVYRGFLLTSLSSTMEWQQAVAISSVIFSAIHLSGENFLQLFIIGYLLGCSYSWTGNLSSSIVIHSLYNALTLVVSYFY 309
[Close]
BLAST of rna-XM_014638769.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445KG72|A0A445KG72_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_016148 PE=4 SV=1)

HSP 1 Score: 469.159 bits (1206), Expect = 1.380e-164
Identity = 240/311 (77.17%), Postives = 263/311 (84.57%), Query Frame = 0 
Query:    1 MLLVLGCPYPYAKFVIDDLGTPFHCFHPPNTIYSQQCSPKLRLRCTPFQRHSFKSFCKREEEEEEIPCFSQGFSALQEEDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILELSGTLVLLKYTAKPRYKFTNFFKKNNSWSYRNWFLSSALGFGFLALLIFLTSLLADYLYGSKPVSNPIQKEMLLSSGISRVSCVLAYCIFIPLLEEVVYRGFLLTSLASTMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLSSSIVIHSLYNALTLVVSYFY 311
            ML VL CP         +L TPF C H PNT YS +CSPKL+L  TP QR+ FK FC R+E    +  FSQGFS LQE+DSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILE  G LVLLKYTAKP+YKF+NF +KN   S RNWFLSSA+GFGFL LLIFLTSLLAD L+GSKPV+NPI K+MLL+S ISR+SCVLAYCI  PLLEEVVYRGFLLTSL+ST+EW QAVAISSV+FSAIH SGENFLQLFIIGC+LGCSY W+GNLSSSI IHSLYNALTLV++YFY
Sbjct:    1 MLSVLVCPS-------HELATPFQCLHFPNTDYSLKCSPKLQLGSTPSQRNPFKCFCNRKEH---VTPFSQGFSELQEDDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILEFGGALVLLKYTAKPQYKFSNFSRKNKLLSNRNWFLSSAVGFGFLVLLIFLTSLLADRLFGSKPVNNPILKDMLLNSDISRLSCVLAYCIVTPLLEEVVYRGFLLTSLSSTLEWQQAVAISSVVFSAIHFSGENFLQLFIIGCVLGCSYCWSGNLSSSIAIHSLYNALTLVITYFY 301
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BLAST of rna-XM_014638769.2 vs. UniProtKB/TrEMBL
Match: tr|I1KF21|I1KF21_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100806529 PE=4 SV=1)

HSP 1 Score: 469.159 bits (1206), Expect = 1.380e-164
Identity = 240/311 (77.17%), Postives = 263/311 (84.57%), Query Frame = 0 
Query:    1 MLLVLGCPYPYAKFVIDDLGTPFHCFHPPNTIYSQQCSPKLRLRCTPFQRHSFKSFCKREEEEEEIPCFSQGFSALQEEDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILELSGTLVLLKYTAKPRYKFTNFFKKNNSWSYRNWFLSSALGFGFLALLIFLTSLLADYLYGSKPVSNPIQKEMLLSSGISRVSCVLAYCIFIPLLEEVVYRGFLLTSLASTMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLSSSIVIHSLYNALTLVVSYFY 311
            ML VL CP         +L TPF C H PNT YS +CSPKL+L  TP QR+ FK FC R+E    +  FSQGFS LQE+DSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILE  G LVLLKYTAKP+YKF+NF +KN   S RNWFLSSA+GFGFL LLIFLTSLLAD L+GSKPV+NPI K+MLL+S ISR+SCVLAYCI  PLLEEVVYRGFLLTSL+ST+EW QAVAISSV+FSAIH SGENFLQLFIIGC+LGCSY W+GNLSSSI IHSLYNALTLV++YFY
Sbjct:    1 MLSVLVCPS-------HELATPFQCLHFPNTDYSLKCSPKLQLGSTPSQRNPFKCFCNRKEH---VTPFSQGFSELQEDDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILEFGGALVLLKYTAKPQYKFSNFSRKNKLLSNRNWFLSSAVGFGFLVLLIFLTSLLADRLFGSKPVNNPILKDMLLNSDISRLSCVLAYCIVTPLLEEVVYRGFLLTSLSSTLEWQQAVAISSVVFSAIHFSGENFLQLFIIGCVLGCSYCWSGNLSSSIAIHSLYNALTLVITYFY 301
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BLAST of rna-XM_014638769.2 vs. UniProtKB/TrEMBL
Match: tr|C6TBH4|C6TBH4_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 463.766 bits (1192), Expect = 1.888e-162
Identity = 238/311 (76.53%), Postives = 261/311 (83.92%), Query Frame = 0 
Query:    1 MLLVLGCPYPYAKFVIDDLGTPFHCFHPPNTIYSQQCSPKLRLRCTPFQRHSFKSFCKREEEEEEIPCFSQGFSALQEEDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILELSGTLVLLKYTAKPRYKFTNFFKKNNSWSYRNWFLSSALGFGFLALLIFLTSLLADYLYGSKPVSNPIQKEMLLSSGISRVSCVLAYCIFIPLLEEVVYRGFLLTSLASTMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLSSSIVIHSLYNALTLVVSYFY 311
            ML VL CP         +L TPF C H PNT YS +CSPKL+L  TP QR+ FK FC R+E    +  FSQGFS LQE+DSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILE  G LVLL+Y AKP+YKF+NF +KN   S RNWFLSSA+GFGFL LLIFLTSLLAD L+GSKPV+NPI K+MLL+S ISR+SCVLAYCI  PLLEEVVYRGFLLTSL ST+EW QAVAISSV+FSAIH SGENFLQLFIIGC+LGCSY W+GNLSSSI IHSLYNALTLV++YFY
Sbjct:    1 MLSVLVCPS-------HELATPFQCLHFPNTDYSLKCSPKLQLGSTPSQRNPFKCFCNRKEH---VTPFSQGFSELQEDDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILEFGGALVLLEYIAKPQYKFSNFSRKNKLLSNRNWFLSSAVGFGFLVLLIFLTSLLADRLFGSKPVNNPILKDMLLNSDISRLSCVLAYCIVTPLLEEVVYRGFLLTSLFSTLEWQQAVAISSVVFSAIHFSGENFLQLFIIGCVLGCSYCWSGNLSSSIAIHSLYNALTLVITYFY 301
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BLAST of rna-XM_014638769.2 vs. UniProtKB/TrEMBL
Match: tr|A0A151RWI0|A0A151RWI0_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_031472 PE=4 SV=1)

HSP 1 Score: 431.795 bits (1109), Expect = 6.514e-149
Identity = 222/304 (73.03%), Postives = 242/304 (79.61%), Query Frame = 0 
Query:    2 LLVLGCPYPYAKFVIDDLGTPFHCFHPPNTIYSQQCSPKLRLRCTPFQRHSFKSFCKREEEEEEIPCFSQGFSALQEEDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILELSGTLVLLKYTAKPRYKFTNFFKKNNSWSYRNWFLSSALGFGFLALLIFLTSLLADYLYGSKPVSNPIQKEMLLSSGISRVSCVLAYCIFIPLLEEVVYRGFLLTSLASTMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLSSSIVIHSLYNALTL 305
            +LVLG P   AKFV D+L TP HCFH PN   S +CSP L+L C+  QR+ F+SFCKREE     P  SQGFSALQE+DSPWESGNVW+NLALYLFTLHIPFSFGGLSVVALF GQPVLDPQTE                     TAKP+YK +NFF+KN   S R+WFLSS LGFGFL LLIFLTSLLAD L+GSKPV+NPI K+MLL+S ISRVSCVLAYCI  PLLEE+VYRGFLLTSL+STMEW QAVAISSVIFSAIH SGENFLQLFIIGC+LGCSY WTGNLSSSI IHSLYNALTL
Sbjct:    4 VLVLGYPSACAKFVHDELATPVHCFHLPNKDNSLKCSPNLQLVCSSSQRNCFRSFCKREERVTLTP-LSQGFSALQEDDSPWESGNVWTNLALYLFTLHIPFSFGGLSVVALFTGQPVLDPQTE---------------------TAKPQYKLSNFFEKNKLLSNRSWFLSSVLGFGFLVLLIFLTSLLADRLFGSKPVNNPILKDMLLNSDISRVSCVLAYCIVTPLLEEIVYRGFLLTSLSSTMEWQQAVAISSVIFSAIHFSGENFLQLFIIGCVLGCSYCWTGNLSSSICIHSLYNALTL 285
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BLAST of rna-XM_014638769.2 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4NH49|A0A6A4NH49_LUPAL (Putative CAAX amino terminal protease OS=Lupinus albus OX=3870 GN=Lalb_Chr19g0135291 PE=4 SV=1)

HSP 1 Score: 372.859 bits (956), Expect = 3.716e-126
Identity = 200/307 (65.15%), Postives = 232/307 (75.57%), Query Frame = 0 
Query:   10 PYAKFVIDDL--GTPFHCFHPPNTIYSQQCSPKLRLRCTPFQRHSFKSFCKREEEEE----EIPCFSQGFSALQEEDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILELSGTLVLLKYTAKPRYKFTNFFKKNNSWSYRNWFLSSALGFGFLALLIFLTSLLADYLYGSKPVSNPIQKEMLLSSGISRVSCVLAYCIFIPLLEEVVYRGFLLTSLASTMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLSSSIVIHSLYNALTLVVSYF 310
            PYAK +   L   TPF+ F  PNT   +    +         R  F ++CK+ EEE+      P FS GFSAL+EE  P ES N+W+ L+LYLF LHIPFSFGGLSVVAL  G+  LDPQT+ALSLL IQILELSG LVL KY AKP+Y+FTNFF  N   + RNW ++S LGFGFL  LIFLTSLLA+ L+GSKPV NPI KE+LL S ISRVSCVL  CI  PLLEEVVYRGFLLTSL+STMEW QAVAISS+IFSAIH SGENFLQLFI+GC+LGCSY WTGNL+S+I IHSLYNALTL+++Y+
Sbjct:   28 PYAKSIRYQLPATTPFYSFLRPNTNTLKYLPQRFN------SRTCFNTYCKKIEEEQVTNNNTP-FSHGFSALKEEFIPLESENLWTTLSLYLFILHIPFSFGGLSVVALLTGESFLDPQTKALSLLIIQILELSGALVLFKYNAKPQYEFTNFFTNNKLLNGRNWIVASVLGFGFLVFLIFLTSLLAETLFGSKPV-NPILKEILLYSDISRVSCVLVLCIVTPLLEEVVYRGFLLTSLSSTMEWQQAVAISSIIFSAIHFSGENFLQLFIVGCVLGCSYCWTGNLNSNIAIHSLYNALTLIITYY 326
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BLAST of rna-XM_014638769.2 vs. UniProtKB/TrEMBL
Match: tr|A0A396I5P8|A0A396I5P8_MEDTR (Putative CAAX amino terminal protease OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr4g0021461 PE=4 SV=1)

HSP 1 Score: 358.221 bits (918), Expect = 6.735e-121
Identity = 187/289 (64.71%), Postives = 218/289 (75.43%), Query Frame = 0 
Query:   24 HCFHPPNTIYSQQCSPKLRLRCTPFQRHSFKSFCKREEEEEEIPCFSQGFSALQEEDSPWESGNVWSNLALYLFTLHIPFSFGGLSVVALFNGQ-PVLDPQTEALSLLTIQILELSGTLVLLKYTAKPRYKFTNFFKKNNSWSYRNWFLSSALGFGFLALLIFLTSLLADYLYGSKPVSNPIQKEMLLSSGISRVSCVLAYCIFIPLLEEVVYRGFLLTSLASTMEWPQAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLSSSIVIHSLYNALTLVVSYFY 311
            H +   NT  S +   K   RC           CKR+E++         +S L+EEDSPW+SG+VW+NL LYLFTLHIP SFGG SVVA   GQ P+L PQT+A+SLLTIQ+LE +  LV+LK TAKP+YKF++FF+ N   S RNWFLSSALGFGF+ALL+ LTSLLAD L G K VSNP  KE+LL + ISRV CV AYCI  PLLEEVVYRGFLLTSL+STM+W QAV ISSV+FSAIH S ENF+QLFIIGC+LGCSY WTGNL SSIVIHSLYNALTL ++YFY
Sbjct:   25 HSYSQKNTNRSSELGSK---RC----------HCKRKEQDTPF------YSVLREEDSPWQSGDVWTNLVLYLFTLHIPLSFGGFSVVAFLTGQQPLLHPQTQAISLLTIQVLEFNAALVVLKSTAKPQYKFSSFFENNKLLSDRNWFLSSALGFGFIALLVCLTSLLADRLLGFKTVSNPTLKEILLHNDISRVCCVTAYCIVTPLLEEVVYRGFLLTSLSSTMKWQQAVVISSVVFSAIHFSSENFVQLFIIGCVLGCSYCWTGNLKSSIVIHSLYNALTLFITYFY 294
The following BLAST results are available for this feature:
BLAST of rna-XM_014638769.2 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of rna-XM_014638769.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 6
Match NameE-valueIdentityDescription
AT2G20725.12.380e-8950.00| CAAX amino terminal protease family protein | Ch... [more]
AT1G14270.12.002e-1628.87| CAAX amino terminal protease family protein | Ch... [more]
AT1G14270.48.560e-1645.65| CAAX amino terminal protease family protein | Ch... [more]
AT1G14270.38.560e-1645.65| CAAX amino terminal protease family protein | Ch... [more]
AT1G14270.21.083e-1545.65| CAAX amino terminal protease family protein | Ch... [more]
AT5G60750.15.398e-1030.94| CAAX amino terminal protease family protein | Ch... [more]
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BLAST of rna-XM_014638769.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3TKH5|A0A1S3TKH5_VIGRR0.000e+0100.00uncharacterized protein LOC106756372 OS=Vigna radi... [more]
tr|A0A0S3SBH6|A0A0S3SBH6_PHAAN0.000e+096.14Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9V6C8|A0A0L9V6C8_PHAAN0.000e+096.14Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A4D6LGJ7|A0A4D6LGJ7_VIGUN0.000e+091.96CAAX amino terminal protease OS=Vigna unguiculata ... [more]
tr|A0A445KG72|A0A445KG72_GLYSO1.380e-16477.17Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|I1KF21|I1KF21_SOYBN1.380e-16477.17Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|C6TBH4|C6TBH4_SOYBN1.888e-16276.53Uncharacterized protein OS=Glycine max OX=3847 PE=... [more]
tr|A0A151RWI0|A0A151RWI0_CAJCA6.514e-14973.03Uncharacterized protein OS=Cajanus cajan OX=3821 G... [more]
tr|A0A6A4NH49|A0A6A4NH49_LUPAL3.716e-12665.15Putative CAAX amino terminal protease OS=Lupinus a... [more]
tr|A0A396I5P8|A0A396I5P8_MEDTR6.735e-12164.71Putative CAAX amino terminal protease OS=Medicago ... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003675Type II CAAX prenyl endopeptidase Rce1-likePFAMPF02517Rce1-likecoord: 218..303
e-value: 1.4E-17
score: 63.8
NoneNo IPR availablePANTHERPTHR43592CAAX AMINO TERMINAL PROTEASEcoord: 55..307

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014638769.2_VrVC1973A-SNU_v1 ID=rna-XM_014638769.2_VrVC1973A-SNU_v1; Name=rna-XM_014638769.2; organism=Vigna radiata; type=mRNA; length=936bp
ATGTTGTTGGTTCTGGGGTGTCCATATCCTTATGCGAAATTTGTTATTGA
TGATTTGGGCACACCCTTTCACTGCTTTCATCCTCCAAACACGATTTATA
GTCAACAATGTTCACCGAAACTGCGGTTGAGATGCACTCCCTTCCAACGC
CACAGTTTTAAGAGCTTTTGCAAAAGGGAAGAAGAAGAAGAAGAAATCCC
ATGCTTTTCTCAGGGATTCTCAGCCTTGCAAGAGGAAGACAGTCCATGGG
AGAGTGGAAATGTGTGGAGCAATCTTGCACTCTATTTATTCACTCTGCAC
ATCCCTTTCAGTTTTGGAGGCTTATCCGTTGTGGCCTTATTCAATGGACA
ACCAGTTCTTGACCCACAAACTGAGGCCTTATCTCTTCTCACCATTCAGA
TTCTCGAGCTTAGTGGGACTCTAGTTTTGTTGAAGTACACAGCTAAGCCA
CGATACAAGTTTACAAATTTCTTCAAAAAGAACAACTCATGGAGCTACAG
GAACTGGTTTTTGTCATCGGCTCTGGGATTTGGGTTTCTTGCTCTTCTGA
TTTTCTTAACATCTCTACTTGCTGACTATTTATATGGCTCCAAGCCTGTG
AGCAACCCCATTCAGAAGGAAATGCTCCTAAGTAGTGGAATCTCAAGAGT
GTCTTGTGTGCTTGCTTATTGCATTTTCATTCCCCTTTTGGAAGAAGTTG
TTTATAGGGGATTTCTTTTGACATCACTTGCATCCACCATGGAATGGCCA
CAAGCTGTTGCCATAAGCTCAGTTATATTCAGTGCCATTCACTTATCTGG
TGAGAACTTTCTTCAATTGTTCATCATTGGGTGTTTACTTGGATGCTCCT
ATTCTTGGACTGGGAATTTGAGTTCCTCCATTGTTATACATTCCTTGTAC
AATGCCTTGACCCTAGTAGTATCTTATTTCTATTAA
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protein sequence of rna-XM_014638769.2_VrVC1973A-SNU_v1

>rna-XM_014638769.2_VrVC1973A-SNU_v1 ID=rna-XM_014638769.2_VrVC1973A-SNU_v1; Name=rna-XM_014638769.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=311bp
MLLVLGCPYPYAKFVIDDLGTPFHCFHPPNTIYSQQCSPKLRLRCTPFQR
HSFKSFCKREEEEEEIPCFSQGFSALQEEDSPWESGNVWSNLALYLFTLH
IPFSFGGLSVVALFNGQPVLDPQTEALSLLTIQILELSGTLVLLKYTAKP
RYKFTNFFKKNNSWSYRNWFLSSALGFGFLALLIFLTSLLADYLYGSKPV
SNPIQKEMLLSSGISRVSCVLAYCIFIPLLEEVVYRGFLLTSLASTMEWP
QAVAISSVIFSAIHLSGENFLQLFIIGCLLGCSYSWTGNLSSSIVIHSLY
NALTLVVSYFY
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mRNA from alignment at chr02:11162091..11165283+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014638769.2_VrVC1973A-SNU_v1 ID=rna-XM_014638769.2_VrVC1973A-SNU_v1; Name=rna-XM_014638769.2; organism=Vigna radiata; type=mRNA; length=3193bp; location=Sequence derived from: chr02:11162091..11165283+ (Vigna radiata
ATGACCCATGAAATAGTATTATGTAGGATAAAGAATGAGTAAAAATTAAG
GATTGAATTCCAGAGTCAAATGTTGTTGGTTCTGGGGTGTCCATATCCTT
ATGCGAAATTTGTTATTGATGATTTGGGCACACCCTTTCACTGCTTTCAT
CCTCCAAACACGATTTATAGTCAACAATGTTCACCGAAACTGCGGTTGAG
ATGCACTCCCTTCCAACGCCACAGTTTTAAGAGCTTTTGcaaaagggaag
aagaagaagaagaaatcccATGCTTTTCTCAGGTATGAAATGCCATGCTG
AATCTTTCTCAGGTTACAGACCCTCTAATTCTGATGTTATCAAGAACAGA
ATAgtattattctttttgttattcCAAATTACAGGGATTCTCAGCCTTGC
AAGAGGAAGACAGTCCATGGGAGAGTGGAAATGTGTGGAGCAATCTTGCA
CTCTATTTATTCACTCTGCACATCCCTTTCAGTTTTGGAGGCTTATCCGT
TGTGGCCTTATTCAATGGACAACCAGTTCTTGACCCACAAACTGAGGTCA
CTTTTGTTATTTGTTCGTTTATTtctcaaaatcatttgattaaACCCCGA
TGTCATCCAAATATTAGGATCTTATTTTGTCTATCTTCTAAagatttatg
ttatttaattagtCTCGTTAGGAAATTAACGTGTCAGCACAATATCACTC
caaattttatcactaaattggTAATTCAAATGTACGTTACCATGATCTTA
CTGAGGAATAAGGCGCTAACACCAAATAAATGAATGAGAGGAACTGACTG
ATGACCAAAATACAGAGAAGATGATTTAGGGTGTGCTTGGAAATTTTTTT
GAAGCATTGTAAACGGAAAATTACACTTTCAAAGGAGTAAATCGTGAAGT
TCAATTGAGTTGATTTCCGTATAACCATTTACTCTAACTAGTATTGTTGC
TTTAATAGGGTATAGATCAACAGTACTTGTTTTTTAGTTCTGCAAGATTG
AATTggaaagttgtttttttaaggTTTGCACTTTGCTGTCTTCTTGTGCT
TGGGGATAGCTTTCTTTATAAGGCAGTGAGTACGTTAGAAGTTTAAGGCA
GTGCAATGAGTATGAGTGGAATTTGTATTTCTATGTGACATACCATAAAG
GGTCCTTCATCTTTAGATTTAGTTCAATGTCTGAATTTACATCTGCCAGA
GTTTAGGTTCATTGATTCACAGTGTTATTTCTTTAGAGCAGACATTTTAA
CAATATCTTTTCCCTCGCTGATGCAGGCCTTATCTCTTCTCACCATTCAG
ATTCTCGAGCTTAGTGGGACTCTAGTTTTGTTGAAGTACACAGCTAAGCC
ACGATACAAGTTTacaaatttcttcaaaaagaaCAACTCATGGAGCTACA
GGAACTGGTTTTTGTCATCGGCTCTGGGATTTGGGTTTCTTGCTCTTCTG
ATTTTCTTAACATCTCTACTTGCTGACTATTTATATGGCTCCAAGGTTGG
TGATTACATTTTTTCCCAGTTATATCATTTCATCtgtgtagaaaaaaaaa
aaaatacaaactataTGCCCAGCACTGTCATAGTTCTTGCATTGTCTTTG
CTGCTTGCATACTGAAACAATATAAACTATATGTCTAGCACATTCTTTCA
AATTCCATATTGTTCAATACCGATACTGCTTTAGGTAGTGAACCAGAAAC
TGGTATCATTATGTTTTTGCCTTTCACACCagaaatatcttttttttaca
aGCATCAACATTAGTAAATAGGTCTAATTAATAAACCTTGACTCAAAAGA
TTGTGCTTCCTAATCATGGAAAATACCCCAAATTTTCAAGTTGTTCCAGG
CACTCCTATTGCTAAACCATGTAGTAAATATGTAAGGGTAAAAGAGGGCT
TTGGGATATAACAAACTTGCTTACATGGAAGCAGGTGTGAGAAGCAACAG
GATAAAGCCAGAGGCTGTGTggaatataaagtaaaattggGAAGACAAAA
GATGTAAGCAGTTGTTTAATGGGGATATGAGATGTATGTTATAGGTCTTT
GGAATGATATGTggtgtcttttctttttctttcttgactTTTGAGGAACT
CTTAATATGTACCTCTGTTGTAATTTGGTAATATCCAAATTATCTTAAAC
AAATCCAAGTTCCAATCAACTagcatttttaaaagaaatgaaaagcaCTT
GGTTGTAAGAGAAACAAAGAACTACATTTTTGGAAGACTAAAGGAGAACT
TAAAGGAATAAAAGAGTAAAGGAAAATTTGGAAATAGATGGTAAGAAACA
ATTGCTGTGTTTGGCTTCTGGCTTAAAAGTTAGATAATGGCATAAGGCTC
TAAAAGTGCTAAATGGCTGAAAAATGCgtgttataattttaattcaatac
tTTAGAGAAGTTGCTGCACACCCTGTTAAAGCTAACTAATGTGAACTGTT
ATGCATTGCCTACGTTGTATAACAATCTTAGtgattgattaaattgtgtA
ACATATCCAGCACTCATACTACTACTTAACTTTGTGAGCTGTTGAAATGT
GTCATTATCATATTCTCCTGATGCTTATTATTAAAAGCATTATTATTCCA
AACCATGGAACTATCATTTCGTCCATTCCCTCCTACCAGACCTCATGATT
CTGTACGTAGTTATTCTAAATTTTGGAAATCTTTTAAGTCTGTACCATAG
CAATTTGAAATGGGTTGAAAGTTAAGAAATGGTGGTGTTTTtccttaact
ttaattttaccATATGCATGCAGCCTGTGAGCAACCCCATTCAGAAGGAA
ATGCTCCTAAGTAGTGGAATCTCAAGAGTGTCTTGTGTGCTTGCTTATTG
CATTTTCATTCCCCTTTTGGAAGAAGTTGTTTATAGGGGATTTCTTTTGA
CATCACTTGCATCCACCATGGAATGGCCACAAGCTGTTGCCATAAGCTCA
GTTATATTCAGTGCCATTCACTTATCTGGTGAGAACTTTCTTCAATTGTT
CATCATTGGGTGTTTACTTGGATGCTCCTATTCTTGGACTGGGAATTTGA
GTTCCTCCATTGTTATACATTCCTTGTACAATGCCTTGACCCTAGTAGTA
TcttatttctattaaattgtATTTACAAATATGATTGAGCAAACTTGTTA
TCTTTTTGTCCAAGTGATATTCCATTCCCTTCGTTCTACTTTA
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Coding sequence (CDS) from alignment at chr02:11162091..11165283+

>rna-XM_014638769.2_VrVC1973A-SNU_v1 ID=rna-XM_014638769.2_VrVC1973A-SNU_v1; Name=rna-XM_014638769.2; organism=Vigna radiata; type=CDS; length=936bp; location=Sequence derived from: chr02:11162091..11165283+ (Vigna radiata
ATGTTGTTGGTTCTGGGGTGTCCATATCCTTATGCGAAATTTGTTATTGA
TGATTTGGGCACACCCTTTCACTGCTTTCATCCTCCAAACACGATTTATA
GTCAACAATGTTCACCGAAACTGCGGTTGAGATGCACTCCCTTCCAACGC
CACAGTTTTAAGAGCTTTTGcaaaagggaagaagaagaagaagaaatccc
ATGCTTTTCTCAGGGATTCTCAGCCTTGCAAGAGGAAGACAGTCCATGGG
AGAGTGGAAATGTGTGGAGCAATCTTGCACTCTATTTATTCACTCTGCAC
ATCCCTTTCAGTTTTGGAGGCTTATCCGTTGTGGCCTTATTCAATGGACA
ACCAGTTCTTGACCCACAAACTGAGGCCTTATCTCTTCTCACCATTCAGA
TTCTCGAGCTTAGTGGGACTCTAGTTTTGTTGAAGTACACAGCTAAGCCA
CGATACAAGTTTacaaatttcttcaaaaagaaCAACTCATGGAGCTACAG
GAACTGGTTTTTGTCATCGGCTCTGGGATTTGGGTTTCTTGCTCTTCTGA
TTTTCTTAACATCTCTACTTGCTGACTATTTATATGGCTCCAAGCCTGTG
AGCAACCCCATTCAGAAGGAAATGCTCCTAAGTAGTGGAATCTCAAGAGT
GTCTTGTGTGCTTGCTTATTGCATTTTCATTCCCCTTTTGGAAGAAGTTG
TTTATAGGGGATTTCTTTTGACATCACTTGCATCCACCATGGAATGGCCA
CAAGCTGTTGCCATAAGCTCAGTTATATTCAGTGCCATTCACTTATCTGG
TGAGAACTTTCTTCAATTGTTCATCATTGGGTGTTTACTTGGATGCTCCT
ATTCTTGGACTGGGAATTTGAGTTCCTCCATTGTTATACATTCCTTGTAC
AATGCCTTGACCCTAGTAGTATcttatttctattaa
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003675Rce1-like
Vocabulary: Biological Process
TermDefinition
GO:0071586CAAX-box protein processing
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity