rna-XM_014640106.2

Transcript Overview
Namerna-XM_014640106.2
Unique Namerna-XM_014640106.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length486
Productuncharacterized LOC106757436
References
External references for this mRNA
DatabaseAccession
GeneID106757436
GenbankXM_014640106.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr03chromosomechr03:7886923..7888194 -Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL336Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvrvL409Vigna angularis Jingnong 6 genome v1.1Vigna angularis
caivrvL227Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivrvL340Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL193Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL292Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvrvL0438Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0541Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL223Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvrvL321Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvrvL047Pisum sativum Cameor genome v1aPisum sativum
psvrvL180Pisum sativum Cameor genome v1aPisum sativum
psvrvL183Pisum sativum Cameor genome v1aPisum sativum
pvvrvL022Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL499Pisum sativum Cameor genome v1aPisum sativum
pvvrvL550Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL035Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL344Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL560Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvrvL039Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvrvR133Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvL359Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR305Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR323Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR337Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvrvL567Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuaR218Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR238Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuR252Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR243Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvrvL176Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL263Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL270Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL349Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL038Cicer arietinum
carvrvL178Cicer arietinum
carvrvL265Cicer arietinum
ccavrvL213Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL310Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL644Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR267Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR284Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR276Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR289Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR303Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR307Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR255Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR281Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL354Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL563Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL018Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL509Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR227Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR238Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigun01g196500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
jg31360.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
LR48_mrnaVigan03g279400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
evm.model.Chr01.1868Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Ca_00999Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_004494361.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigan.04G389500.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Cc_v2.0_08170.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Ca_07134.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Va03G080490.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat3g020520.1Pisum sativum Cameor genome v1aPisum sativum
rna-KK1_030761Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Tiffany.R1.5g131400.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vum_04G02744.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigun01g196500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cr_05574.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigst.04G244100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
XM_058884464.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
PvulFLAVERTChr01.1001428Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Phvul.001G212300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Hedin2.R1.5g165920.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106757436gene-LOC106757436_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014640106.2-1exon-XM_014640106.2-1_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014495592.1cds-XP_014495592.1_VrVC1973A-SNU_v1Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014640106.2_VrVC1973A-SNU_v1rna-XM_014640106.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014640106.2_VrVC1973A-SNU_v1rna-XM_014640106.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
BLAST of rna-XM_014640106.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TPD8|A0A1S3TPD8_VIGRR (uncharacterized protein LOC106757436 OS=Vigna radiata var. radiata OX=3916 GN=LOC106757436 PE=4 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 2.439e-111
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query:    1 MGNAISSSSSCISNGVSIRNILKRRKPTKTAILLESGGNTREIKLPVKSGELMIEEFGHVVTPLDELRRTGRVSALLPEEELVAGKVYLLLPVSRVHSKASKFEMAIAEAQSSHKKRTRGTNMAKVSPSLISRSSENEVTVSPPRSGNQVRWNPVLDTIFE 161
            MGNAISSSSSCISNGVSIRNILKRRKPTKTAILLESGGNTREIKLPVKSGELMIEEFGHVVTPLDELRRTGRVSALLPEEELVAGKVYLLLPVSRVHSKASKFEMAIAEAQSSHKKRTRGTNMAKVSPSLISRSSENEVTVSPPRSGNQVRWNPVLDTIFE
Sbjct:    1 MGNAISSSSSCISNGVSIRNILKRRKPTKTAILLESGGNTREIKLPVKSGELMIEEFGHVVTPLDELRRTGRVSALLPEEELVAGKVYLLLPVSRVHSKASKFEMAIAEAQSSHKKRTRGTNMAKVSPSLISRSSENEVTVSPPRSGNQVRWNPVLDTIFE 161          
BLAST of rna-XM_014640106.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3S087|A0A0S3S087_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G389500 PE=4 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 3.514e-100
Identity = 153/167 (91.62%), Postives = 157/167 (94.01%), Query Frame = 0
Query:    1 MGNAISSSSSCISNGVSIRNILKRRKPTKTAILLESGGNTREIKLPVKSGELMIEEFGHVVTPLDELRRTGRVSALLPEEELVAGKVYLLLPVSRVHSKASKFEMAIAEAQSSHKKRTRGTNMAKVSPSLISRSS----ENEVTVSP--PRSGNQVRWNPVLDTIFE 161
            MGNA  +SSSCISNGVSI NILKR+KPTKTA+LLESGGNTREIKLPVKSGELMIEEFGHVVTPLDELRRTGRVSALLPEEELVAGKVYLLLPVSRVHSKASKFEMAIAEAQSSHKKRTRGTNMAKVSPSLISRS+    ENEVTVSP  PR GNQVRWNPVLDTIFE
Sbjct:    1 MGNA--TSSSCISNGVSIGNILKRKKPTKTAVLLESGGNTREIKLPVKSGELMIEEFGHVVTPLDELRRTGRVSALLPEEELVAGKVYLLLPVSRVHSKASKFEMAIAEAQSSHKKRTRGTNMAKVSPSLISRSTERDAENEVTVSPACPRLGNQVRWNPVLDTIFE 165          
BLAST of rna-XM_014640106.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9U9Z7|A0A0L9U9Z7_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g279400 PE=4 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 3.514e-100
Identity = 153/167 (91.62%), Postives = 157/167 (94.01%), Query Frame = 0
Query:    1 MGNAISSSSSCISNGVSIRNILKRRKPTKTAILLESGGNTREIKLPVKSGELMIEEFGHVVTPLDELRRTGRVSALLPEEELVAGKVYLLLPVSRVHSKASKFEMAIAEAQSSHKKRTRGTNMAKVSPSLISRSS----ENEVTVSP--PRSGNQVRWNPVLDTIFE 161
            MGNA  +SSSCISNGVSI NILKR+KPTKTA+LLESGGNTREIKLPVKSGELMIEEFGHVVTPLDELRRTGRVSALLPEEELVAGKVYLLLPVSRVHSKASKFEMAIAEAQSSHKKRTRGTNMAKVSPSLISRS+    ENEVTVSP  PR GNQVRWNPVLDTIFE
Sbjct:    1 MGNA--TSSSCISNGVSIGNILKRKKPTKTAVLLESGGNTREIKLPVKSGELMIEEFGHVVTPLDELRRTGRVSALLPEEELVAGKVYLLLPVSRVHSKASKFEMAIAEAQSSHKKRTRGTNMAKVSPSLISRSTERDAENEVTVSPACPRLGNQVRWNPVLDTIFE 165          
BLAST of rna-XM_014640106.2 vs. UniProtKB/TrEMBL
Match: tr|V7D0K8|V7D0K8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G212300g PE=4 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.083e-83
Identity = 136/168 (80.95%), Postives = 142/168 (84.52%), Query Frame = 0
Query:    1 MGNAISSSSSCISNGVSIRNIL-KRRKPTKTAILLESGGNTREIKLPVKSGELMIEEFGHVVTPLDELRRTGRVSALLPEEELVAGKVYLLLPVSRVHSKASKFEMAIAEAQSSHKKRTRGTNMAKVSPSLISRS----SENEVTVSP--PRSGNQVRWNPVLDTIFE 161
            MGN     SSCISN  S+ +IL KRRKPTKTAILLES GNTRE+KLPVKSGE+MIEEFGHV+TPLDELRRTGRVSALL +EELVAGKVYLLLPVSRVHSKASKFEM IAE QSS KKRTRG N AKVSPSLISRS     ENEVTV P  PR GNQVRWNPVLDTI E
Sbjct:    1 MGNV---PSSCISNVASVGDILRKRRKPTKTAILLESDGNTREMKLPVKSGEIMIEEFGHVITPLDELRRTGRVSALLADEELVAGKVYLLLPVSRVHSKASKFEMDIAETQSSQKKRTRGMNTAKVSPSLISRSIERDVENEVTVFPVCPRLGNQVRWNPVLDTILE 165          
BLAST of rna-XM_014640106.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MA61|A0A4D6MA61_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g2998 PE=4 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 7.693e-83
Identity = 138/168 (82.14%), Postives = 144/168 (85.71%), Query Frame = 0
Query:    1 MGNAISSSSSCISNGVSIRNILKRR-KPTKTAILLESGGNTREIKLPVKSGELMIEEFGHVVTPLDELRRTGRVSALLPEEELVAGKVYLLLPVSRVHSKASKFEMAIAEAQSSHKKRTRGTNMAK----VSPSLISRSSENEVTVSP--PRSGNQVRWNPVLDTIFE 161
            MGNA  +SSSCISNGVSI  ILK+R KPTKTAILLESGGNTREIKLPVKSGELMIEEFGHVVTPLDELRRTGRVSALLPEE+LV GKVYLLLPVSRVHSKASKFEMAIAEAQS   KRTRG NMAK    +  S   R +ENEVTV P  PR GNQ+RWNPVLDTIFE
Sbjct:    1 MGNA--TSSSCISNGVSIGKILKKRTKPTKTAILLESGGNTREIKLPVKSGELMIEEFGHVVTPLDELRRTGRVSALLPEEDLVPGKVYLLLPVSRVHSKASKFEMAIAEAQS---KRTRGINMAKVSPSLVSSSSERDAENEVTVFPVCPRLGNQLRWNPVLDTIFE 163          
BLAST of rna-XM_014640106.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2QC86|A0A0B2QC86_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_007873 PE=4 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 2.279e-72
Identity = 125/171 (73.10%), Postives = 139/171 (81.29%), Query Frame = 0
Query:    1 MGNAISSSSSCISNGV-SIRNILKRRKPTKTA-ILLESGGNTREIKLPVKSGELMIEEFGHVVTPLDELRRTGRVSALLPEEELVAGKVYLLLPVSRVHSKASKFEMAIAEAQSSHKKRTRGTNMAKVSPSLISRSS----ENEVTVS----PPRSGNQVRWNPVLDTIFE 161
            MGN  S S  CISNGV SI NILK+R+  K   +LL+S GNTREIKLP+KSGELMIEEFGHVVTP+DE+RRTGRVSALL +EELVAGKVYLLLPV+R++SKAS+FEMAIAE QS H K  RG NMAKVSPSLISRS+    EN+VTVS     PR GNQVRWNPVLD I E
Sbjct:    1 MGNTTSCSCICISNGVISIGNILKKRRKAKKTAMLLDSDGNTREIKLPIKSGELMIEEFGHVVTPVDEIRRTGRVSALLADEELVAGKVYLLLPVNRINSKASEFEMAIAEKQSGHTKSKRGNNMAKVSPSLISRSNERDEENQVTVSVFPVCPRFGNQVRWNPVLDPIVE 171          
BLAST of rna-XM_014640106.2 vs. UniProtKB/TrEMBL
Match: tr|C6TGE7|C6TGE7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 7.582e-71
Identity = 124/171 (72.51%), Postives = 138/171 (80.70%), Query Frame = 0
Query:    1 MGNAISSSSSCISNGV-SIRNILKRRKPTKTA-ILLESGGNTREIKLPVKSGELMIEEFGHVVTPLDELRRTGRVSALLPEEELVAGKVYLLLPVSRVHSKASKFEMAIAEAQSSHKKRTRGTNMAKVSPSLISRSS----ENEVTVS----PPRSGNQVRWNPVLDTIFE 161
            MGN  S S  CISNGV SI NILK+R+  K   +LL+S GNTREIKLP+KSGELMIEEFGHVVTP+DE+RRTGRVSALL +EELVAGKVYLLLPV+R++SKAS+FEMAIAE QS H K  RG  MAKVSPSLISRS+    EN+VTVS     PR GNQVRWNPVLD I E
Sbjct:    1 MGNTTSCSCICISNGVISIGNILKKRRKAKKTAMLLDSDGNTREIKLPIKSGELMIEEFGHVVTPVDEIRRTGRVSALLADEELVAGKVYLLLPVNRINSKASEFEMAIAEKQSGHTKSKRGNIMAKVSPSLISRSNERDEENQVTVSVFPVCPRFGNQVRWNPVLDPIVE 171          
BLAST of rna-XM_014640106.2 vs. UniProtKB/TrEMBL
Match: tr|I1NBB7|I1NBB7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100810032 PE=4 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 1.374e-68
Identity = 111/161 (68.94%), Postives = 124/161 (77.02%), Query Frame = 0
Query:    1 MGNAISSSSSCISNGVSIRNILKRRKPTKTAILLESGGNTREIKLPVKSGELMIEEFGHVVTPLDELRRTGRVSALLPEEELVAGKVYLLLPVSRVHSKASKFEMAIAEAQSSHKKRTRGTNMAKVSPSLISRSSENEVTVSPPRSGNQVRWNPVLDTIFE 161
            MGNA S S  CI NG  ++ I   RK TKTA+LL+S  N REIKLP  SGELMI+EFGHV+TP+DELRRTGRVSALL +EELVAGKVYLLLPV+RV+SKAS+FEMA+AE QS H KRTRG NMAKVSPS+             PR GNQVRWNPVLD IFE
Sbjct:    1 MGNANSCSCICIPNGAILKKI---RKGTKTAMLLDSDENPREIKLPATSGELMIQEFGHVITPVDELRRTGRVSALLADEELVAGKVYLLLPVNRVNSKASEFEMALAEKQSGHTKRTRGNNMAKVSPSVC------------PRFGNQVRWNPVLDPIFE 146          
BLAST of rna-XM_014640106.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371GD41|A0A371GD41_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_29922 PE=4 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.814e-66
Identity = 115/171 (67.25%), Postives = 129/171 (75.44%), Query Frame = 0
Query:    1 MGNAISSSSSCISNGVSIRNILKRRKP--TKTAILLESGGNTREIKLPVKSGELMIEEFGHVVTPLDELRRTGRVSALLPEEELVAGKVYLLLPVSRVHSKASKFEMAIAEAQSSHKKRTRGTNMAKVSPSLISRSSENEVTVSP--------PRSGNQVRWNPVLDTIFE 161
            MGN  ++S SCI NGVSI NI+ +R    TKTA+LL++GGNTREIKLP KSGE+MIEEFGHV+TP+DE+RRTGR+SALL +EELVAGKVYLLLPVSRVHSKAS FE AIAE Q     RTRG N AKVSPSLISR  +  V             R GNQ RWNPVLD IFE
Sbjct:    1 MGN--TASCSCICNGVSIGNIMNKRGKGTTKTAMLLDTGGNTREIKLPAKSGEVMIEEFGHVITPVDEVRRTGRISALLADEELVAGKVYLLLPVSRVHSKASDFERAIAETQ-----RTRGHNTAKVSPSLISRPRQRVVQNVVTVTVFPGHQRLGNQPRWNPVLDPIFE 164          
BLAST of rna-XM_014640106.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0KMG0|A0A0R0KMG0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_03G218900 PE=4 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.592e-53
Identity = 95/127 (74.80%), Postives = 107/127 (84.25%), Query Frame = 0
Query:    1 MGNAISSSSSCISNGV-SIRNILKRRKPTKTA-ILLESGGNTREIKLPVKSGELMIEEFGHVVTPLDELRRTGRVSALLPEEELVAGKVYLLLPVSRVHSKASKFEMAIAEAQSSHKKRTRGTNMAK 125
            MGN  S S  CISNGV SI NILK+R+  K   +LL+S GNTREIKLP+KSGELMIEEFGHVVTP+DE+RRTGRVSALL +EELVAGKVYLLLPV+R++SKAS+FEMAIAE QS H K  RG NMAK
Sbjct:    1 MGNTTSCSCICISNGVISIGNILKKRRKAKKTAMLLDSDGNTREIKLPIKSGELMIEEFGHVVTPVDEIRRTGRVSALLADEELVAGKVYLLLPVNRINSKASEFEMAIAEKQSGHTKSKRGNNMAK 127          
The following BLAST results are available for this feature:
BLAST of rna-XM_014640106.2 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of rna-XM_014640106.2 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of rna-XM_014640106.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3TPD8|A0A1S3TPD8_VIGRR2.439e-111100.00uncharacterized protein LOC106757436 OS=Vigna radi... [more]
tr|A0A0S3S087|A0A0S3S087_PHAAN3.514e-10091.62Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9U9Z7|A0A0L9U9Z7_PHAAN3.514e-10091.62Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|V7D0K8|V7D0K8_PHAVU1.083e-8380.95Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A4D6MA61|A0A4D6MA61_VIGUN7.693e-8382.14Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|A0A0B2QC86|A0A0B2QC86_GLYSO2.279e-7273.10Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|C6TGE7|C6TGE7_SOYBN7.582e-7172.51Uncharacterized protein OS=Glycine max OX=3847 PE=... [more]
tr|I1NBB7|I1NBB7_SOYBN1.374e-6868.94Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A371GD41|A0A371GD41_MUCPR2.814e-6667.25Uncharacterized protein (Fragment) OS=Mucuna pruri... [more]
tr|A0A0R0KMG0|A0A0R0KMG0_SOYBN1.592e-5374.80Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025322PADRE domainPFAMPF14009PADREcoord: 1..161
e-value: 7.3E-21
score: 75.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..141
NoneNo IPR availablePANTHERPTHR33052DUF4228 DOMAIN PROTEIN-RELATEDcoord: 28..159

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014640106.2_VrVC1973A-SNU_v1 ID=rna-XM_014640106.2_VrVC1973A-SNU_v1; Name=rna-XM_014640106.2; organism=Vigna radiata; type=mRNA; length=486bp
ATGGGGAACGCTATTTCTTCTTCTTCTTCTTGTATCTCTAACGGTGTAAG
TATTCGGAACATTTTGAAGAGAAGAAAACCTACGAAAACAGCAATTCTGT
TGGAGAGTGGTGGGAACACTCGGGAGATCAAGCTACCAGTGAAATCGGGG
GAGCTAATGATAGAAGAATTCGGCCACGTCGTCACTCCGTTGGACGAACT
CCGTAGAACGGGACGGGTTTCTGCTTTGTTGCCCGAAGAGGAGCTTGTGG
CAGGGAAGGTTTACCTGCTGTTGCCGGTTAGTAGGGTCCATTCCAAGGCT
TCAAAGTTTGAGATGGCCATTGCAGAGGCACAGAGTAGCCACAAAAAGAG
GACAAGGGGAACCAACATGGCTAAGGTTTCACCCTCACTCATTTCGAGGT
CAAGTGAAAACGAAGTTACCGTTTCCCCTCCTCGTTCTGGGAATCAAGTA
CGATGGAATCCCGTTTTGGATACTATCTTTGAATGA
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protein sequence of rna-XM_014640106.2_VrVC1973A-SNU_v1

>rna-XM_014640106.2_VrVC1973A-SNU_v1 ID=rna-XM_014640106.2_VrVC1973A-SNU_v1; Name=rna-XM_014640106.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=161bp
MGNAISSSSSCISNGVSIRNILKRRKPTKTAILLESGGNTREIKLPVKSG
ELMIEEFGHVVTPLDELRRTGRVSALLPEEELVAGKVYLLLPVSRVHSKA
SKFEMAIAEAQSSHKKRTRGTNMAKVSPSLISRSSENEVTVSPPRSGNQV
RWNPVLDTIFE
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mRNA from alignment at chr03:7886923..7888194-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014640106.2_VrVC1973A-SNU_v1 ID=rna-XM_014640106.2_VrVC1973A-SNU_v1; Name=rna-XM_014640106.2; organism=Vigna radiata; type=mRNA; length=1272bp; location=Sequence derived from: chr03:7886923..7888194- (Vigna radiata
CACCCAAAATTTGGTATCCTTCAAAATGTCTTTTCTTTTATCTCTCGCAA ACTGGTTGGCCTGTGTTTTCTTCTATCTTTCGGTAATTTTATATAGTTGC TGATAACATACTTTTTTGGAGTTACAAAAGCACAATGATTATTGAACTGT AAAGGTTGAAAGAAAGGAAAGAAAGGAGAAAAGTAAAGAGTCAATGAGAA AGAAAGAAAGAAATTCCGCGTTTTGGACACCAGTTCTCCATAGAAGCCAA AATTCGCGTCAGTCCAAGATTTCTAAACATTCCCCCTTACCTAAACCCTA TATATGCTTCACTCCCATCTTCTACCACAAAATCAACCCTCTTTTTTCTA TTCCTTCTTAACGTTATAAGTCTATGGGGAACGCTATTTCTTCTTCTTCT TCTTGTATCTCTAACGGTGTAAGTATTCGGAACATTTTGAAGAGAAGAAA ACCTACGAAAACAGCAATTCTGTTGGAGAGTGGTGGGAACACTCGGGAGA TCAAGCTACCAGTGAAATCGGGGGAGCTAATGATAGAAGAATTCGGCCAC GTCGTCACTCCGTTGGACGAACTCCGTAGAACGGGACGGGTTTCTGCTTT GTTGCCCGAAGAGGAGCTTGTGGCAGGGAAGGTTTACCTGCTGTTGCCGG TTAGTAGGGTCCATTCCAAGGCTTCAAAGTTTGAGATGGCCATTGCAGAG GCACAGAGTAGCCACAAAAAGAGGACAAGGGGAACCAACATGGCTAAGGT TTCACCCTCACTCATTTCGAGGTCAAGTGAAAACGAAGTTACCGTTTCCC CTCCTCGTTCTGGGAATCAAGTACGATGGAATCCCGTTTTGGATACTATC TTTGAATGATCCATTTTGCTGAATGATGCCAAGTTCATAATTAAAACGTG GAGCAATGCTGACAAGGCATTTTGTTCAAATTAATTAAAATTTATAACTG TTGGATTTCATGTACAAATAGTGTTACTAAAACTCCTCTTGCAAAAAGAA AAATCTCCACTTTAGTATTGGATTAGAGTGTGGAGATCCAGTCCGGAAAT CACTTTAGTGGCCCAAAGTTTTAAGGCTTAAAGCCCATATAAATATAAGC CCCATTCCCATCAGAAAAGGTTGAGGGTTTTTTTCATATGTTGCAAAACA TGCTTTTTTGAATAAAATTTTCTGAACAAGTTTTTCAACACATAAAATTG TGTTTTGGAACAAATTATTTTCTCTTTTTCTTCCTCTCAAGGAATACAGT GACAGTGGAATATAATATAATA
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Coding sequence (CDS) from alignment at chr03:7886923..7888194-

>rna-XM_014640106.2_VrVC1973A-SNU_v1 ID=rna-XM_014640106.2_VrVC1973A-SNU_v1; Name=rna-XM_014640106.2; organism=Vigna radiata; type=CDS; length=486bp; location=Sequence derived from: chr03:7886923..7888194- (Vigna radiata
ATGGGGAACGCTATTTCTTCTTCTTCTTCTTGTATCTCTAACGGTGTAAG
TATTCGGAACATTTTGAAGAGAAGAAAACCTACGAAAACAGCAATTCTGT
TGGAGAGTGGTGGGAACACTCGGGAGATCAAGCTACCAGTGAAATCGGGG
GAGCTAATGATAGAAGAATTCGGCCACGTCGTCACTCCGTTGGACGAACT
CCGTAGAACGGGACGGGTTTCTGCTTTGTTGCCCGAAGAGGAGCTTGTGG
CAGGGAAGGTTTACCTGCTGTTGCCGGTTAGTAGGGTCCATTCCAAGGCT
TCAAAGTTTGAGATGGCCATTGCAGAGGCACAGAGTAGCCACAAAAAGAG
GACAAGGGGAACCAACATGGCTAAGGTTTCACCCTCACTCATTTCGAGGT
CAAGTGAAAACGAAGTTACCGTTTCCCCTCCTCGTTCTGGGAATCAAGTA
CGATGGAATCCCGTTTTGGATACTATCTTTGAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR025322PADRE_dom