rna-XM_014641862.2
|
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_014641862.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9XH43|CET2_TOBAC (CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 4.883e-99 Identity = 131/175 (74.86%), Postives = 152/175 (86.86%), Query Frame = 0
Query: 1 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
M +DPLVIGRVIG+VVD F+P+VK++V+YN++K VYNGHE FPSSV +KP+V++ GGD+RSFFT++M DPDVPGPSDPYLREHLHWIVTDIPGTTD +FG E+V YE+PRPNIGIHRFVFLLFKQK RQ V+ P SRD F TR FAEEN+LG PVAAVFFN QRETAARRR
Sbjct: 1 MGSKMSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDLRSFFTMIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGKEIVGYEMPRPNIGIHRFVFLLFKQKKRQTVLTAPLSRDRFNTRKFAEENELGSPVAAVFFNCQRETAARRR 175
BLAST of rna-XM_014641862.2 vs. UniProtKB/Swiss-Prot
Match: sp|O82088|SELFP_SOLLC (Protein SELF-PRUNING OS=Solanum lycopersicum OX=4081 GN=SP PE=2 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 4.991e-99 Identity = 131/170 (77.06%), Postives = 148/170 (87.06%), Query Frame = 0
Query: 6 TDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
+PLVIGRVIG+VVD F P+VK++V YNNNK VYNGHEFFPSSV +KP+V++ GGD+RSFFTL+M DPDVPGPSDPYLREHLHWIVTDIPGTTD +FG EVV YE+PRPNIGIHRFVFLLFKQK RQ + P SRD F +R F+EEN+LG PVAAVFFN QRETAARRR
Sbjct: 6 CEPLVIGRVIGEVVDYFCPSVKMSVVYNNNKHVYNGHEFFPSSVTSKPRVEVHGGDLRSFFTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREVVGYEMPRPNIGIHRFVFLLFKQKKRQTISSAPVSRDQFSSRKFSEENELGSPVAAVFFNCQRETAARRR 175
BLAST of rna-XM_014641862.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9XH42|CET4_TOBAC (CEN-like protein 4 OS=Nicotiana tabacum OX=4097 GN=CET4 PE=2 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 4.777e-98 Identity = 129/175 (73.71%), Postives = 151/175 (86.29%), Query Frame = 0
Query: 1 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
M +DPLVIGRVIG+VVD F+P+VK++V+YN++K VYNGHE FPSSV +KP+V++ GGD+RSFFTL+M DPDVPGPSDPYLREHLHWIVTDIPGTTD +FG E+V YE+PRPNIGIHRFVFLLFKQK RQ ++ P SRD F TR F+EEN+LG PVAA FFN QRETAARRR
Sbjct: 1 MGSKMSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDLRSFFTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREIVGYEMPRPNIGIHRFVFLLFKQKKRQTLLSAPLSRDRFNTRKFSEENELGSPVAAAFFNCQRETAARRR 175
BLAST of rna-XM_014641862.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9ZNV5|CEN_ARATH (Protein CENTRORADIALIS-like OS=Arabidopsis thaliana OX=3702 GN=CEN PE=2 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 6.784e-98 Identity = 132/175 (75.43%), Postives = 150/175 (85.71%), Query Frame = 0
Query: 1 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
M IS+DPL++GRVIGDVVD VK+TV+YN++KQVYNGHE FPS V KPKV++ GGDMRSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTD +FG E++ YE+PRPNIGIHRFV+LLFKQ R +V+ +PS RD F TR FA ENDLGLPVAAVFFN QRETAARRR
Sbjct: 1 MARISSDPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHRFVYLLFKQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRETAARRR 175
BLAST of rna-XM_014641862.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q41261|CEN_ANTMA (Protein CENTRORADIALIS OS=Antirrhinum majus OX=4151 GN=CEN PE=1 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 9.917e-95 Identity = 133/177 (75.14%), Postives = 150/177 (84.75%), Query Frame = 0
Query: 4 ISTDPLVIGRVIGDVVDLFSPTVKITVSYNNN---KQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPS--SRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
+S+DPLVIGRVIGDVVD F+ TVK++V YN+N K VYNGHE FPS+V + P+V++ GGDMRSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTD++FG EVVSYE+PRPNIGIHRFVFLLFKQK R M P RD F TR F +EN+LGLPVAAVFFN QRETAARRR
Sbjct: 5 VSSDPLVIGRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVEVHGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVSYEMPRPNIGIHRFVFLLFKQKKRGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNCQRETAARRR 181
BLAST of rna-XM_014641862.2 vs. UniProtKB/Swiss-Prot
Match: sp|P93003|TFL1_ARATH (Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana OX=3702 GN=TFL1 PE=1 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 2.069e-89 Identity = 123/169 (72.78%), Postives = 146/169 (86.39%), Query Frame = 0
Query: 7 DPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
+PL++GRV+GDV+D F+PT K+ VSYN KQV NGHE FPSSV++KP+V+I GGD+RSFFTL+M DPDVPGPSDP+L+EHLHWIVT+IPGTTD TFG EVVSYE+PRP+IGIHRFVF+LF+QK R+ + SRD F TR FA E DLGLPVAAVFFNAQRETAAR+R
Sbjct: 10 EPLIMGRVVGDVLDFFTPTTKMNVSYNK-KQVSNGHELFPSSVSSKPRVEIHGGDLRSFFTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177
BLAST of rna-XM_014641862.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9XH44|CET1_TOBAC (CEN-like protein 1 OS=Nicotiana tabacum OX=4097 GN=CET1 PE=2 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.815e-84 Identity = 115/169 (68.05%), Postives = 140/169 (82.84%), Query Frame = 0
Query: 7 DPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
+PLV+ RVIG+VVD F+P+VK+ V YN +KQV+NGHE P+ +A KP+V+I G DMRS +TL+MTDPDVPGPSDPYLREHLHWIVTDIPG+TD++FG E+VSYE P+P IGIHR+V LL+KQ RQ V K ++RD F TR + EN LG PVAAV+FNAQRETAARRR
Sbjct: 7 EPLVVARVIGEVVDSFNPSVKLNVIYNGSKQVFNGHELMPAVIAAKPRVEIGGEDMRSAYTLIMTDPDVPGPSDPYLREHLHWIVTDIPGSTDSSFGREIVSYESPKPVIGIHRYVLLLYKQSGRQTV-KPAATRDHFNTRRYTAENGLGSPVAAVYFNAQRETAARRR 174
BLAST of rna-XM_014641862.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FIT4|BFT_ARATH (Protein BROTHER of FT and TFL 1 OS=Arabidopsis thaliana OX=3702 GN=BFT PE=3 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 3.241e-75 Identity = 101/169 (59.76%), Postives = 133/169 (78.70%), Query Frame = 0
Query: 7 DPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
+PL++GRVIGDV+++F+P+V + V++N+N V NGHE PS + +KP+V+I G D+RSFFTL+M DPD P PS+PY+RE+LHW+VTDIPGTTD +FG E+V YE P+P GIHR+VF LFKQ+ RQAV P +R+ F T +F+ L PVAAV+FNAQRETA RRR
Sbjct: 6 EPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQDLRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRYVFALFKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAPRRR 174
BLAST of rna-XM_014641862.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SXZ2|FT_ARATH (Protein FLOWERING LOCUS T OS=Arabidopsis thaliana OX=3702 GN=FT PE=1 SV=2) HSP 1 Score: 199.904 bits (507), Expect = 6.423e-65 Identity = 97/175 (55.43%), Postives = 127/175 (72.57%), Query Frame = 0
Query: 1 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
M++ DPL++ RV+GDV+D F+ ++ + V+Y ++V NG + PS V NKP+V+I G D+R+F+TL+M DPDVP PS+P+LRE+LHW+VTDIP TT TTFGNE+V YE P P GIHR VF+LF+Q RQ V P R F TR FAE +LGLPVAAVF+N QRE+ R
Sbjct: 1 MSINIRDPLIVSRVVGDVLDPFNRSITLKVTYGQ-REVTNGLDLRPSQVQNKPRVEIGGEDLRNFYTLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILFRQLGRQTVYA-PGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGR 173
BLAST of rna-XM_014641862.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q93WI9|HD3A_ORYSJ (Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica OX=39947 GN=HD3A PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 9.336e-64 Identity = 95/169 (56.21%), Postives = 121/169 (71.60%), Query Frame = 0
Query: 7 DPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
DPLV+GRV+GDV+D F + + V+Y + K V NG E PS V ++P+V++ G DMR+F+TL+M DPD P PSDP LRE+LHW+VTDIPGTT +FG EV+ YE PRP +GIHR VF+LF+Q RQ V P R F T+ FAE +LG PVAAV+FN QRE + R
Sbjct: 9 DPLVVGRVVGDVLDAFVRSTNLKVTYGS-KTVSNGCELKPSMVTHQPRVEVGGNDMRTFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLVFVLFQQLGRQTVYA-PGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGR 175
BLAST of rna-XM_014641862.2 vs. Araport11
Match: AT2G27550.1 (| centroradiali | Chr2:11773417-11774509 FORWARD LENGTH=175 | 201606) HSP 1 Score: 283.108 bits (723), Expect = 6.941e-99 Identity = 132/175 (75.43%), Postives = 150/175 (85.71%), Query Frame = 0
Query: 1 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
M IS+DPL++GRVIGDVVD VK+TV+YN++KQVYNGHE FPS V KPKV++ GGDMRSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTD +FG E++ YE+PRPNIGIHRFV+LLFKQ R +V+ +PS RD F TR FA ENDLGLPVAAVFFN QRETAARRR
Sbjct: 1 MARISSDPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHRFVYLLFKQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRETAARRR 175
BLAST of rna-XM_014641862.2 vs. Araport11
Match: AT5G03840.1 (| PEBP (phosphatidylethanolamine-binding protein) family protein | Chr5:1024760-1025796 REVERSE LENGTH=177 | 201606) HSP 1 Score: 261.922 bits (668), Expect = 2.117e-90 Identity = 123/169 (72.78%), Postives = 146/169 (86.39%), Query Frame = 0
Query: 7 DPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
+PL++GRV+GDV+D F+PT K+ VSYN KQV NGHE FPSSV++KP+V+I GGD+RSFFTL+M DPDVPGPSDP+L+EHLHWIVT+IPGTTD TFG EVVSYE+PRP+IGIHRFVF+LF+QK R+ + SRD F TR FA E DLGLPVAAVFFNAQRETAAR+R
Sbjct: 10 EPLIMGRVVGDVLDFFTPTTKMNVSYNK-KQVSNGHELFPSSVSSKPRVEIHGGDLRSFFTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177
BLAST of rna-XM_014641862.2 vs. Araport11
Match: AT5G62040.1 (| PEBP (phosphatidylethanolamine-binding protein) family protein | Chr5:24922810-24923709 FORWARD LENGTH=177 | 201606) HSP 1 Score: 226.098 bits (575), Expect = 3.316e-76 Identity = 101/169 (59.76%), Postives = 133/169 (78.70%), Query Frame = 0
Query: 7 DPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
+PL++GRVIGDV+++F+P+V + V++N+N V NGHE PS + +KP+V+I G D+RSFFTL+M DPD P PS+PY+RE+LHW+VTDIPGTTD +FG E+V YE P+P GIHR+VF LFKQ+ RQAV P +R+ F T +F+ L PVAAV+FNAQRETA RRR
Sbjct: 6 EPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQDLRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRYVFALFKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAPRRR 174
BLAST of rna-XM_014641862.2 vs. Araport11
Match: AT1G65480.1 (| PEBP (phosphatidylethanolamine-binding protein) family protein | Chr1:24331510-24333689 FORWARD LENGTH=175 | 201606) HSP 1 Score: 199.904 bits (507), Expect = 6.572e-66 Identity = 97/175 (55.43%), Postives = 127/175 (72.57%), Query Frame = 0
Query: 1 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
M++ DPL++ RV+GDV+D F+ ++ + V+Y ++V NG + PS V NKP+V+I G D+R+F+TL+M DPDVP PS+P+LRE+LHW+VTDIP TT TTFGNE+V YE P P GIHR VF+LF+Q RQ V P R F TR FAE +LGLPVAAVF+N QRE+ R
Sbjct: 1 MSINIRDPLIVSRVVGDVLDPFNRSITLKVTYGQ-REVTNGLDLRPSQVQNKPRVEIGGEDLRNFYTLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILFRQLGRQTVYA-PGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGR 173
BLAST of rna-XM_014641862.2 vs. Araport11
Match: AT1G65480.2 (| PEBP (phosphatidylethanolamine-binding protein) family protein | Chr1:24331378-24333689 FORWARD LENGTH=219 | 201606) HSP 1 Score: 200.675 bits (509), Expect = 1.071e-65 Identity = 96/169 (56.80%), Postives = 124/169 (73.37%), Query Frame = 0
Query: 7 DPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
DPL++ RV+GDV+D F+ ++ + V+Y ++V NG + PS V NKP+V+I G D+R+F+TL+M DPDVP PS+P+LRE+LHW+VTDIP TT TTFGNE+V YE P P GIHR VF+LF+Q RQ V P R F TR FAE +LGLPVAAVF+N QRE+ R
Sbjct: 51 DPLIVSRVVGDVLDPFNRSITLKVTYGQ-REVTNGLDLRPSQVQNKPRVEIGGEDLRNFYTLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILFRQLGRQTVYA-PGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGR 217
BLAST of rna-XM_014641862.2 vs. Araport11
Match: AT4G20370.1 (| PEBP (phosphatidylethanolamine-binding protein) family protein | Chr4:11001011-11002965 REVERSE LENGTH=175 | 201606) HSP 1 Score: 190.66 bits (483), Expect = 2.581e-62 Identity = 96/175 (54.86%), Postives = 120/175 (68.57%), Query Frame = 0
Query: 1 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
M++ DPLV+G V+GDV+D F+ V + V+Y + ++V NG + PS V NKP V+I G D R+F+TL+M DPDVP PS+P+ RE+LHW+VTDIP TT FGNEVV YE PRP GIHR V +LF+Q RQ V P R F TR FAE +LGLPVAA +FN QRE R
Sbjct: 1 MSLSRRDPLVVGSVVGDVLDPFTRLVSLKVTYGH-REVTNGLDLRPSQVLNKPIVEIGGDDFRNFYTLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLFRQLGRQTVYA-PGWRQQFNTREFAEIYNLGLPVAASYFNCQRENGCGGR 173
BLAST of rna-XM_014641862.2 vs. Araport11
Match: AT1G18100.1 (| PEBP (phosphatidylethanolamine-binding protein) family protein | Chr1:6228049-6230110 REVERSE LENGTH=173 | 201606) HSP 1 Score: 180.644 bits (457), Expect = 2.614e-58 Identity = 91/172 (52.91%), Postives = 117/172 (68.02%), Query Frame = 0
Query: 5 STDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVM-KIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
S DPLV+GRVIGDV+D+F PT ++V Y K + NG E PS+ N PKV I G +TL+MTDPD P PS+P +RE +HWIV DIPG T+ + G E++ Y PRP +GIHR++ +LF+Q +M + P SR F TR FA DLGLPVA V+FNAQ+E A+RRR
Sbjct: 4 SVDPLVVGRVIGDVLDMFIPTANMSV-YFGPKHITNGCEIKPSTAVNPPKVNISGHS-DELYTLVMTDPDAPSPSEPNMREWVHWIVVDIPGGTNPSRGKEILPYMEPRPPVGIHRYILVLFRQNSPVGLMVQQPPSRANFSTRMFAGHFDLGLPVATVYFNAQKEPASRRR 173
BLAST of rna-XM_014641862.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TU95|A0A1S3TU95_VIGRR (CEN-like protein 2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106758862 PE=3 SV=1) HSP 1 Score: 362.459 bits (929), Expect = 1.038e-126 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
Query: 1 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR
Sbjct: 1 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
BLAST of rna-XM_014641862.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SGW6|A0A0S3SGW6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G072900 PE=3 SV=1) HSP 1 Score: 357.066 bits (915), Expect = 1.357e-124 Identity = 172/175 (98.29%), Postives = 173/175 (98.86%), Query Frame = 0
Query: 1 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSV NKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVV+YEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLF TRSFAEENDLGLPVAAVFFNAQRETAARRR
Sbjct: 1 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVTNKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVNYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFNTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
BLAST of rna-XM_014641862.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UMG9|A0A0L9UMG9_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g169000 PE=3 SV=1) HSP 1 Score: 358.607 bits (919), Expect = 1.179e-123 Identity = 172/175 (98.29%), Postives = 173/175 (98.86%), Query Frame = 0
Query: 1 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSV NKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVV+YEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLF TRSFAEENDLGLPVAAVFFNAQRETAARRR
Sbjct: 102 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVTNKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVNYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFNTRSFAEENDLGLPVAAVFFNAQRETAARRR 276 HSP 2 Score: 138.658 bits (348), Expect = 3.932e-37 Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 0
Query: 1 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLL 69
MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSV NKPKVQIRGGDMRSFFTL+
Sbjct: 1 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVTNKPKVQIRGGDMRSFFTLV 69
BLAST of rna-XM_014641862.2 vs. UniProtKB/TrEMBL
Match: tr|V7BVM9|V7BVM9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G124600g PE=3 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 3.658e-117 Identity = 164/175 (93.71%), Postives = 169/175 (96.57%), Query Frame = 0
Query: 1 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
MNMISTDPLVIGRVIGDVVD F+ T+KITVSYNN KQVYNGHEFFPSSV KPKVQIRGGDMRSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVV+YEIPRPNIGIHRFVFLLFKQKCRQAVMK+PSSRDLF TRSFAEENDLGLPVAAVFFNAQRETAARRR
Sbjct: 3 MNMISTDPLVIGRVIGDVVDPFTTTLKITVSYNN-KQVYNGHEFFPSSVTTKPKVQIRGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVNYEIPRPNIGIHRFVFLLFKQKCRQAVMKVPSSRDLFNTRSFAEENDLGLPVAAVFFNAQRETAARRR 176
BLAST of rna-XM_014641862.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445HS30|A0A445HS30_GLYSO (CEN-like protein 2 OS=Glycine soja OX=3848 GN=D0Y65_034798 PE=3 SV=1) HSP 1 Score: 323.939 bits (829), Expect = 2.207e-111 Identity = 153/175 (87.43%), Postives = 164/175 (93.71%), Query Frame = 0
Query: 1 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
MNMIS+DPLVIG+VIGDVVD F+PTVKITVSYNNNKQVYNGHEFFPSSV KPKVQI GGDMRSFFTL+MTDPDVPGPSDPYLREHLHW+VTDIPGTTD TFGNEVV YEIPRPNIGIHRFVFL+FKQK RQ V+K P++RDLF +RSFAEEN+LG PVAAVFFNAQRETAARRR
Sbjct: 3 MNMISSDPLVIGKVIGDVVDHFTPTVKITVSYNNNKQVYNGHEFFPSSVTTKPKVQIHGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWLVTDIPGTTDATFGNEVVEYEIPRPNIGIHRFVFLVFKQKRRQGVLKTPTTRDLFNSRSFAEENELGPPVAAVFFNAQRETAARRR 177
BLAST of rna-XM_014641862.2 vs. UniProtKB/TrEMBL
Match: tr|G7Z0B6|G7Z0B6_SOYBN (CENTRORADIALIS-like protein 3 OS=Glycine max OX=3847 GN=CEN3 PE=2 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 2.989e-111 Identity = 153/175 (87.43%), Postives = 164/175 (93.71%), Query Frame = 0
Query: 1 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
MNMIS+DPLVIG+VIGDVVD F+PTVKITVSYNNNKQVYNGHEFFPSSV KPKVQI GGDMRSFFTL+MTDPDVPGPSDPYLREHLHW+VTDIPGTTD TFGNEVV YEIPRPNIGIHRFVFL+FKQK RQ V+K P++RDLF +RSFAEEN+LG PVAAVFFNAQRETAARRR
Sbjct: 1 MNMISSDPLVIGKVIGDVVDHFTPTVKITVSYNNNKQVYNGHEFFPSSVTTKPKVQIHGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWLVTDIPGTTDATFGNEVVEYEIPRPNIGIHRFVFLVFKQKRRQGVLKTPTTRDLFNSRSFAEENELGPPVAAVFFNAQRETAARRR 175
BLAST of rna-XM_014641862.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2R6S5|A0A0B2R6S5_GLYSO (CEN-like protein 2 OS=Glycine soja OX=3848 GN=glysoja_026220 PE=3 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 2.989e-111 Identity = 153/175 (87.43%), Postives = 164/175 (93.71%), Query Frame = 0
Query: 1 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
MNMIS+DPLVIG+VIGDVVD F+PTVKITVSYNNNKQVYNGHEFFPSSV KPKVQI GGDMRSFFTL+MTDPDVPGPSDPYLREHLHW+VTDIPGTTD TFGNEVV YEIPRPNIGIHRFVFL+FKQK RQ V+K P++RDLF +RSFAEEN+LG PVAAVFFNAQRETAARRR
Sbjct: 1 MNMISSDPLVIGKVIGDVVDHFTPTVKITVSYNNNKQVYNGHEFFPSSVTTKPKVQIHGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWMVTDIPGTTDATFGNEVVEYEIPRPNIGIHRFVFLVFKQKRRQGVLKTPTTRDLFNSRSFAEENELGPPVAAVFFNAQRETAARRR 175
BLAST of rna-XM_014641862.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371E0J1|A0A371E0J1_MUCPR (Protein CENTRORADIALIS-like protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CEN PE=3 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 9.081e-110 Identity = 157/175 (89.71%), Postives = 163/175 (93.14%), Query Frame = 0
Query: 1 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
MNMIS+DPLVIGRVIGDVVD F+ TVK+TVSYNN KQVYNGHEFFPSSV KPKVQIRGGDMRSFFTL+MTDPDVPGPSDPYLREHLH IVTDIPGTTD TFGNE+V YE P+PNIGIHRFVFLLFKQK RQAVMKIPSSRDLF TRSFAEENDLG PVAAVFFNAQRETAARRR
Sbjct: 3 MNMISSDPLVIGRVIGDVVDHFAQTVKMTVSYNN-KQVYNGHEFFPSSVTTKPKVQIRGGDMRSFFTLVMTDPDVPGPSDPYLREHLHMIVTDIPGTTDATFGNEMVKYENPKPNIGIHRFVFLLFKQKRRQAVMKIPSSRDLFNTRSFAEENDLGPPVAAVFFNAQRETAARRR 176
BLAST of rna-XM_014641862.2 vs. UniProtKB/TrEMBL
Match: tr|A0A151RN04|A0A151RN04_CAJCA (CEN-like protein 2 OS=Cajanus cajan OX=3821 GN=KK1_034645 PE=3 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 7.783e-107 Identity = 152/175 (86.86%), Postives = 160/175 (91.43%), Query Frame = 0
Query: 1 MNMISTDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
MNMIS+DPLVIGRVIGDVVD F+PTVK+TV++NN KQVYNGHEFFPSSV KPKVQI GDMRSFFTL+MTDPDVPGPSDPYLREHLHW+VTDIPGTTD TFG EVV YE PRPNIGIHRFVFLLFKQK RQ VMKIPSSRDLF R+FAEENDLG PVAAVFFNAQRETAARRR
Sbjct: 1 MNMISSDPLVIGRVIGDVVDYFTPTVKMTVTFNN-KQVYNGHEFFPSSVTTKPKVQIHEGDMRSFFTLVMTDPDVPGPSDPYLREHLHWMVTDIPGTTDATFGTEVVKYENPRPNIGIHRFVFLLFKQKRRQGVMKIPSSRDLFNARNFAEENDLGPPVAAVFFNAQRETAARRR 174
BLAST of rna-XM_014641862.2 vs. UniProtKB/TrEMBL
Match: tr|A0A6J0ZW60|A0A6J0ZW60_9ROSI (CEN-like protein 2 OS=Herrania umbratica OX=108875 GN=LOC110412565 PE=3 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 4.043e-103 Identity = 140/170 (82.35%), Postives = 156/170 (91.76%), Query Frame = 0
Query: 6 TDPLVIGRVIGDVVDLFSPTVKITVSYNNNKQVYNGHEFFPSSVANKPKVQIRGGDMRSFFTLLMTDPDVPGPSDPYLREHLHWIVTDIPGTTDTTFGNEVVSYEIPRPNIGIHRFVFLLFKQKCRQAVMKIPSSRDLFKTRSFAEENDLGLPVAAVFFNAQRETAARRR 175
+DPLV+GRVIGDV+D +P+VK+TV++N+NKQVYNGHE FPSSV NKPKV + GGDMRSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTD TFG EVV+YE+PRPNIGIHRFVFLLFKQK RQAV+ PSSRD F TR FAEEN+LGLPVAAV+FNAQRETAARRR
Sbjct: 5 SDPLVVGRVIGDVIDAITPSVKMTVTFNSNKQVYNGHELFPSSVTNKPKVDVHGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVVNYEMPRPNIGIHRFVFLLFKQKRRQAVLSTPSSRDHFNTRKFAEENELGLPVAAVYFNAQRETAARRR 174 The following BLAST results are available for this feature:
BLAST of rna-XM_014641862.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot) Total hits: 10
BLAST of rna-XM_014641862.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11) Total hits: 7
BLAST of rna-XM_014641862.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_014641862.2_VrVC1973A-SNU_v1 ID=rna-XM_014641862.2_VrVC1973A-SNU_v1; Name=rna-XM_014641862.2; organism=Vigna radiata; type=mRNA; length=528bpback to top protein sequence of rna-XM_014641862.2_VrVC1973A-SNU_v1 >rna-XM_014641862.2_VrVC1973A-SNU_v1 ID=rna-XM_014641862.2_VrVC1973A-SNU_v1; Name=rna-XM_014641862.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=175bpback to top mRNA from alignment at chr04:7140179..7141429- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_014641862.2_VrVC1973A-SNU_v1 ID=rna-XM_014641862.2_VrVC1973A-SNU_v1; Name=rna-XM_014641862.2; organism=Vigna radiata; type=mRNA; length=1251bp; location=Sequence derived from: chr04:7140179..7141429- (Vigna radiataback to top Coding sequence (CDS) from alignment at chr04:7140179..7141429- >rna-XM_014641862.2_VrVC1973A-SNU_v1 ID=rna-XM_014641862.2_VrVC1973A-SNU_v1; Name=rna-XM_014641862.2; organism=Vigna radiata; type=CDS; length=528bp; location=Sequence derived from: chr04:7140179..7141429- (Vigna radiataback to top |