rna-XM_014644554.2

Transcript Overview
Namerna-XM_014644554.2
Unique Namerna-XM_014644554.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length696
ProductMADS-box protein JOINTLESS, transcript variant X7
References
External references for this mRNA
DatabaseAccession
GeneID106761060
GenbankXM_014644554.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr05chromosomechr05:15644814..15651413 +Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anvrvL0325Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0372Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvrvL489Vigna angularis Jingnong 6 genome v1.1Vigna angularis
caivrvL535Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivrvL540Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL425Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crvrvL052Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccvrvL0711Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0778Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0785Cajanus cajan Asha genome v1.0Cajanus cajan
psvrvL120Pisum sativum Cameor genome v1aPisum sativum
psvrvL441Pisum sativum Cameor genome v1aPisum sativum
pvvrvL736Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL242Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvrvL256Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR455Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR488Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR493Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvzwsR358Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvzwsR411Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR353Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuaR372Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR398Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvrvL402Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL441Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL389Cicer arietinum
ccavrvL319Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR394Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR466Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR524Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR383Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL221Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL684Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR375Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Cc_v2.0_06699.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Phvul.009G037300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Ca_14930.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
evm.model.Chr09.1866Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Va04G058920.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vum_02G00927.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-KK1_009264Cajanus cajan Asha genome v1.0Cajanus cajan
Vigan.02G112900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Ca_01491Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigun09g182600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun09g182600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
XM_058891800.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
PvulFLAVERTChr09.348Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigst.02G086500.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
LR48_mrnaVigan04g197900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106761060gene-LOC106761060_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014644554.2-1exon-XM_014644554.2-1_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014644554.2-2exon-XM_014644554.2-2_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014644554.2-3exon-XM_014644554.2-3_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014644554.2-4exon-XM_014644554.2-4_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014644554.2-5exon-XM_014644554.2-5_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014644554.2-6exon-XM_014644554.2-6_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014644554.2-7exon-XM_014644554.2-7_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014644554.2-8exon-XM_014644554.2-8_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014644554.2-9exon-XM_014644554.2-9_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014500040.1cds-XP_014500040.1_VrVC1973A-SNU_v1Vigna radiataCDS
cds-XP_014500040.1cds-XP_014500040.1_VrVC1973A-SNU_v1_2Vigna radiataCDS
cds-XP_014500040.1cds-XP_014500040.1_VrVC1973A-SNU_v1_3Vigna radiataCDS
cds-XP_014500040.1cds-XP_014500040.1_VrVC1973A-SNU_v1_4Vigna radiataCDS
cds-XP_014500040.1cds-XP_014500040.1_VrVC1973A-SNU_v1_5Vigna radiataCDS
cds-XP_014500040.1cds-XP_014500040.1_VrVC1973A-SNU_v1_6Vigna radiataCDS
cds-XP_014500040.1cds-XP_014500040.1_VrVC1973A-SNU_v1_7Vigna radiataCDS
cds-XP_014500040.1cds-XP_014500040.1_VrVC1973A-SNU_v1_8Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014644554.2_VrVC1973A-SNU_v1rna-XM_014644554.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014644554.2_VrVC1973A-SNU_v1rna-XM_014644554.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
[Close]
BLAST of rna-XM_014644554.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FUY6|JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum OX=4081 GN=J PE=1 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 3.545e-78
Identity = 132/238 (55.46%), Postives = 169/238 (71.01%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQL---ETTSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMR----FLMDSNMGM----QEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGL 227
            M R KI+IKKIDN TARQVTFSKRRRGLFKKAEELSVLCDADV LI+FSSTGKLFDYSSSSM  I+ + + HS  ++KLD+PSLELQL      S+LSKEI+E++  L  M+G++LQGL++ ELQQLE+ LE+GL RVIE K  ++M +I++LQ+KG+ L EEN+ L+++++E            R     + +   G      E+G S ES  N  + I  PP +D SSDTSLKLGL
Sbjct:    1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSSMKQILERRDLHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLNIEELQQLERSLETGLSRVIERKGDKIMREINQLQQKGMHLMEENEKLRQQVMEISNNNNNNNNGYREAGVVIFEPENGFNNNNNEDGQSSESVTNPCNSIDPPPQDDDSSDTSLKLGL 238
[Close]
BLAST of rna-XM_014644554.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FVC1|SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana OX=3702 GN=SVP PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.588e-77
Identity = 129/241 (53.53%), Postives = 171/241 (70.95%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQLETTS---KLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMD---------SNMGMQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLPF 229
            M R KI+I+KIDN TARQVTFSKRRRGLFKKAEELSVLCDADV LI+FSSTGKLF++ SSSM +++ ++N  S  ++KLD+PSLELQL   S   ++SKEIA+++  L  M+G++LQGL + ELQQLEK LE+GL RVIE K  ++M +ISELQKKG+ L +ENK L+++   T++     +  M+   +          N  + EEG S ES  N  +  +  PV+  SSDTSL+LGLP+
Sbjct:    1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSSMKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQ--GTQLTEENERLGMQICNNVHAHGGAESENAAVYEEGQSSESITNAGNS-TGAPVDSESSDTSLRLGLPY 238
[Close]
BLAST of rna-XM_014644554.2 vs. UniProtKB/Swiss-Prot
Match: sp|O82794|AGL24_ARATH (MADS-box protein AGL24 OS=Arabidopsis thaliana OX=3702 GN=AGL24 PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 1.484e-70
Identity = 130/231 (56.28%), Postives = 168/231 (72.73%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKL-DRPSLELQLETT--SKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMDSNMGMQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLP 228
            M R KI+IKKIDNITARQVTFSKRRRG+FKKA+ELSVLCDADV LI+FS+TGKLF++SSS M DI+ +Y+ H+  ++KL D PS  L+LE    S+LSKE+ ++T++L  ++G+DL GL+L ELQ+LEK LESGL RV E K + +M QI  L+K+G  L +ENK L+ KL ET     L +A +  L ++   ++ E V    T NVSS  S  P+ED  SDTSLKLGLP
Sbjct:    1 MAREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSSRMRDILGRYSLHASNINKLMDPPSTHLRLENCNLSRLSKEVEDKTKQLRKLRGEDLDGLNLEELQRLEKLLESGLSRVSEKKGECVMSQIFSLEKRGSELVDENKRLRDKL-ET-----LERAKLTTLKEA---LETESV----TTNVSSYDSGTPLED-DSDTSLKLGLP 217
[Close]
BLAST of rna-XM_014644554.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9XJ66|MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS22 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 3.836e-66
Identity = 120/231 (51.95%), Postives = 156/231 (67.53%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQLETT--SKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMDSNMGMQEEGVSLEST-NNVSSCISDPPVEDGSSDTSLKLGLP 228
            M R + +IK+I++  ARQVTFSKRRRGLFKKAEELSVLCDADV LIVFSSTGKL  ++SSSMN+II KYNTHS  + K ++PSL+L LE +  + L++++AE +  L  M+G++L+GLS++ELQQLEK LE+GL RV+  K++Q M QISELQ+K   L EEN  L+ ++ +          T  F+         EG S ES    + S  S     D  SD SLKLGLP
Sbjct:    1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSSMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQISPAEKQVVDTENFVT--------EGQSSESVMTALHSGSSQSQDNDDGSDVSLKLGLP 223
[Close]
BLAST of rna-XM_014644554.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q5K4R0|MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS47 PE=1 SV=3)

HSP 1 Score: 197.593 bits (501), Expect = 3.756e-62
Identity = 113/228 (49.56%), Postives = 160/228 (70.18%), Query Frame = 0 
Query:    3 RAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQLE---TTSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMDSNMGMQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGL 227
            R +I I++IDN+ ARQVTFSKRRRGLFKKAEELS+LCDA+VGL+VFS+TGKLF ++S+SM  II +YN+HS  + + +   L+LQ E   T ++L +E+AE +  L  M+G++L  L++ +LQ+LEK LESGL  V++ K K+++ +I  L++K + L EEN  LK++L   ++  M R   M+   DS + + EEG S ES  N +S    PP  D SSDTSL+LGL
Sbjct:   22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSMEQIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKEQL---QVSRMSRMEEMQPGPDSEI-VYEEGQSSESVTN-ASYPRPPPDNDYSSDTSLRLGL 244
[Close]
BLAST of rna-XM_014644554.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q69TG5|MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS55 PE=2 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 5.082e-57
Identity = 112/239 (46.86%), Postives = 152/239 (63.60%), Query Frame = 0 
Query:   15 TARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDR-PSLE----------------------LQLETT--SKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMDSNMGMQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLP 228
             ARQVTFSKRRRGLFKKAEEL+VLCDADV L+VFSSTGKL  ++SS+MN+II KY THS  + K D+ PS++                      LQLE +  S L++++AE + +L  M+G++L+GLS+ ELQQ+EK LE+GL RV+  K++Q M +ISELQ+KGI L EEN  L+ ++ +     +        + D+   + E+G S ES     +  S    +DG SD SLKLGLP
Sbjct:   15 AARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQMPQVPTAGLA-------VPDTENVLTEDGQSSESVMTALNSGSSQDNDDG-SDISLKLGLP 245
[Close]
BLAST of rna-XM_014644554.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q6EP49|MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS27 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 3.450e-40
Identity = 74/170 (43.53%), Postives = 111/170 (65.29%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQL--ETTSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKL 168
            M R KI I++IDN T+RQVTFSKRR G+FKKA+EL++LCDA+VGL++FSSTG+L++YSS+SM  +I +Y         +  P+ EL+      + L +++         + G+DL GL++ ELQ LE +LE  L  V   K+  ++ +I EL +KG ++ +EN  L KK+
Sbjct:    1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSSTSMKSVIDRYGKSKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKI 170
[Close]
BLAST of rna-XM_014644554.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SZJ6|AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana OX=3702 GN=AGL21 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.101e-39
Identity = 81/187 (43.32%), Postives = 122/187 (65.24%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQL--ETTSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQ-ISELQKKGIVLEEENKHLKKKL--VETEMEAMLRKATM 182
            M R KI I++ID+ T+RQVTFSKRR+GL KKA+EL++LCDA+VGLI+FSSTGKL+D++SSSM  +I +YN       +L  P+ E++      + L +E+         M G+ L GLS+NEL  LE ++E  L R I ++++Q++ Q I EL +K  ++ +EN  L +K+  +  E   + +KA M
Sbjct:    1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSSMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISL-RGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRIHQENVELYKKAYM 186
[Close]
BLAST of rna-XM_014644554.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q40872|AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng OX=4054 GN=AG2 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.976e-38
Identity = 73/175 (41.71%), Postives = 109/175 (62.29%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYN---THSPGMDKLDRPSLELQLETTSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETE 172
            + R KI+IK+I+N T RQVTF KRR GL KKA ELSVLCDA+V LIVFS+ G+L++Y+++S+   I +Y    T SP    +   + +   +  SKL +EI+   +    M G+ L  L++ +L+ LE KLE G+ R+   K + +  +I  +QKK I L   N++L+ K+ E E
Sbjct:   17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSVKGTIERYKKACTDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKIAENE 191
[Close]
BLAST of rna-XM_014644554.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9XGJ4|GGM13_GNEGN (MADS-box protein GGM13 OS=Gnetum gnemon OX=3382 GN=GGM13 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.610e-38
Identity = 81/174 (46.55%), Postives = 111/174 (63.79%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYS--SSSMNDIITKYNTHSPGMDKLDRPSLELQLETTSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETE 172
            M R KI+IK+I+N T RQVTFSKRR GL KKA ELSVLCDA++GLI+FSS+GKLF+YS  SSSM  II +Y   S G    +  +  L  E T ++  E  +    +  M G+DL  L++ EL  L ++LES   RV   K + M+ Q+  L++K  +LE++N HL + L E +
Sbjct:    1 MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSASSSMKKIIERYQKVS-GARITEYDNQHLYCEMT-RMKNENEKLQTNIRRMMGEDLTSLTMTELHHLGQQLESASSRVRSRKNQLMLQQLENLRRKERILEDQNSHLCRLLAEQQ 172
[Close]
BLAST of rna-XM_014644554.2 vs. Araport11
Match: AT2G22540.3 (| K-box region and MADS-box transcription factor family protein | Chr2:9580417-9583603 FORWARD LENGTH=240 | 201606)

HSP 1 Score: 236.113 bits (601), Expect = 2.648e-78
Identity = 129/241 (53.53%), Postives = 171/241 (70.95%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQLETTS---KLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMD---------SNMGMQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLPF 229
            M R KI+I+KIDN TARQVTFSKRRRGLFKKAEELSVLCDADV LI+FSSTGKLF++ SSSM +++ ++N  S  ++KLD+PSLELQL   S   ++SKEIA+++  L  M+G++LQGL + ELQQLEK LE+GL RVIE K  ++M +ISELQKKG+ L +ENK L+++   T++     +  M+   +          N  + EEG S ES  N  +  +  PV+  SSDTSL+LGLP+
Sbjct:    1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSSMKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQ--GTQLTEENERLGMQICNNVHAHGGAESENAAVYEEGQSSESITNAGNS-TGAPVDSESSDTSLRLGLPY 238
[Close]
BLAST of rna-XM_014644554.2 vs. Araport11
Match: AT2G22540.1 (| K-box region and MADS-box transcription factor family protein | Chr2:9580417-9583603 FORWARD LENGTH=240 | 201606)

HSP 1 Score: 236.113 bits (601), Expect = 2.648e-78
Identity = 129/241 (53.53%), Postives = 171/241 (70.95%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQLETTS---KLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMD---------SNMGMQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLPF 229
            M R KI+I+KIDN TARQVTFSKRRRGLFKKAEELSVLCDADV LI+FSSTGKLF++ SSSM +++ ++N  S  ++KLD+PSLELQL   S   ++SKEIA+++  L  M+G++LQGL + ELQQLEK LE+GL RVIE K  ++M +ISELQKKG+ L +ENK L+++   T++     +  M+   +          N  + EEG S ES  N  +  +  PV+  SSDTSL+LGLP+
Sbjct:    1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSSMKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQ--GTQLTEENERLGMQICNNVHAHGGAESENAAVYEEGQSSESITNAGNS-TGAPVDSESSDTSLRLGLPY 238
[Close]
BLAST of rna-XM_014644554.2 vs. Araport11
Match: AT2G22540.2 (| K-box region and MADS-box transcription factor family protein | Chr2:9580417-9583603 FORWARD LENGTH=235 | 201606)

HSP 1 Score: 225.713 bits (574), Expect = 2.698e-74
Identity = 127/241 (52.70%), Postives = 167/241 (69.29%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQLETTS---KLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMD---------SNMGMQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLPF 229
            M R KI+I+KIDN TARQVTFSKRRRGLFKKAEELSVLCDADV LI+FSSTGKLFD     M +++ ++N  S  ++KLD+PSLELQL   S   ++SKEIA+++  L  M+G++LQGL + ELQQLEK LE+GL RVIE K  ++M +ISELQKKG+ L +ENK L+++   T++     +  M+   +          N  + EEG S ES  N  +  +  PV+  SSDTSL+LGLP+
Sbjct:    1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFD-----MKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQ--GTQLTEENERLGMQICNNVHAHGGAESENAAVYEEGQSSESITNAGNS-TGAPVDSESSDTSLRLGLPY 233
[Close]
BLAST of rna-XM_014644554.2 vs. Araport11
Match: AT4G24540.1 (| AGAMOUS-like 24 | Chr4:12671160-12673645 REVERSE LENGTH=220 | 201606)

HSP 1 Score: 218.009 bits (554), Expect = 1.518e-71
Identity = 130/231 (56.28%), Postives = 168/231 (72.73%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKL-DRPSLELQLETT--SKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMDSNMGMQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLP 228
            M R KI+IKKIDNITARQVTFSKRRRG+FKKA+ELSVLCDADV LI+FS+TGKLF++SSS M DI+ +Y+ H+  ++KL D PS  L+LE    S+LSKE+ ++T++L  ++G+DL GL+L ELQ+LEK LESGL RV E K + +M QI  L+K+G  L +ENK L+ KL ET     L +A +  L ++   ++ E V    T NVSS  S  P+ED  SDTSLKLGLP
Sbjct:    1 MAREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSSRMRDILGRYSLHASNINKLMDPPSTHLRLENCNLSRLSKEVEDKTKQLRKLRGEDLDGLNLEELQRLEKLLESGLSRVSEKKGECVMSQIFSLEKRGSELVDENKRLRDKL-ET-----LERAKLTTLKEA---LETESV----TTNVSSYDSGTPLED-DSDTSLKLGLP 217
[Close]
BLAST of rna-XM_014644554.2 vs. Araport11
Match: AT4G37940.1 (| AGAMOUS-like 21 | Chr4:17835695-17838621 REVERSE LENGTH=228 | 201606)

HSP 1 Score: 138.658 bits (348), Expect = 2.149e-40
Identity = 81/187 (43.32%), Postives = 122/187 (65.24%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQL--ETTSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQ-ISELQKKGIVLEEENKHLKKKL--VETEMEAMLRKATM 182
            M R KI I++ID+ T+RQVTFSKRR+GL KKA+EL++LCDA+VGLI+FSSTGKL+D++SSSM  +I +YN       +L  P+ E++      + L +E+         M G+ L GLS+NEL  LE ++E  L R I ++++Q++ Q I EL +K  ++ +EN  L +K+  +  E   + +KA M
Sbjct:    1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSSMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISL-RGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRIHQENVELYKKAYM 186
[Close]
BLAST of rna-XM_014644554.2 vs. Araport11
Match: AT3G57230.4 (| AGAMOUS-like 16 | Chr3:21177710-21180671 FORWARD LENGTH=240 | 201606)

HSP 1 Score: 133.265 bits (334), Expect = 4.504e-38
Identity = 73/170 (42.94%), Postives = 111/170 (65.29%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQL--ETTSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKL 168
            M R KI IK+I+N T+RQVTFSKRR GL KKA+EL++LCDA+VG+I+FSSTG+L+D+SSSSM  +I +Y+         + P+ E+Q   +  + L +++         M G++L GLS+  LQ LE +LE  L  V   K++ ++ +I  L ++G ++ +EN  L KK+
Sbjct:    1 MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSSSMKSVIERYSDAKGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSVEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKV 170
[Close]
BLAST of rna-XM_014644554.2 vs. Araport11
Match: AT3G57230.1 (| AGAMOUS-like 16 | Chr3:21177710-21180671 FORWARD LENGTH=240 | 201606)

HSP 1 Score: 133.265 bits (334), Expect = 4.504e-38
Identity = 73/170 (42.94%), Postives = 111/170 (65.29%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQL--ETTSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKL 168
            M R KI IK+I+N T+RQVTFSKRR GL KKA+EL++LCDA+VG+I+FSSTG+L+D+SSSSM  +I +Y+         + P+ E+Q   +  + L +++         M G++L GLS+  LQ LE +LE  L  V   K++ ++ +I  L ++G ++ +EN  L KK+
Sbjct:    1 MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSSSMKSVIERYSDAKGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSVEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKV 170
[Close]
BLAST of rna-XM_014644554.2 vs. Araport11
Match: AT4G37940.4 (| AGAMOUS-like 21 | Chr4:17835695-17838621 REVERSE LENGTH=214 | 201606)

HSP 1 Score: 130.954 bits (328), Expect = 1.614e-37
Identity = 75/170 (44.12%), Postives = 112/170 (65.88%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQL--ETTSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQIS-ELQKKGIVLEEENKHLKKK 167
            M R KI I++ID+ T+RQVTFSKRR+GL KKA+EL++LCDA+VGLI+FSSTGKL+D++SSSM  +I +YN       +L  P+ E++      + L +E+         M G+ L GLS+NEL  LE ++E  L R I ++++ ++ Q + +L +K   + +EN  L KK
Sbjct:    1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSSMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISL-RGIRMRKRNLIHQENLDLSRKVQRIHQENVELYKK 169
[Close]
BLAST of rna-XM_014644554.2 vs. Araport11
Match: AT2G14210.1 (| AGAMOUS-like 44 | Chr2:6018841-6023585 FORWARD LENGTH=234 | 201606)

HSP 1 Score: 127.872 bits (320), Expect = 3.666e-36
Identity = 87/243 (35.80%), Postives = 141/243 (58.02%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSS-SSMNDIITKYNTHSPGMDKLDRPSLEL-----QLETTSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFL--MDSNMGMQEEGVSLESTNNVSSCISDP-----PVEDGSSDTSLKLGLPFS 230
            M R KI I++IDN T+RQVTFSKRR GL KKA+ELS+LCDA+VG+I+FSSTGKL+DY+S SSM  II +YN       +L   + E+     ++ +  +  + + E  R+L    G++L G++ N+LQ LE +L + L  V   K++ M  +I EL +KG ++++EN  L+       +  ++RK  ++    +       E   S++  +N ++  + P      ++    + S++LGL  S
Sbjct:    1 MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASNSSMKTIIERYNRVKEEQHQLLNHASEIKFWQREVASLQQQLQYLQECHRKLV---GEELSGMNANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHELQ------NIVDIMRKENIKLQKKVHGRTNAIEGNSSVDPISNGTTTYAPPQLQLIQLQPAPREKSIRLGLQLS 234
[Close]
BLAST of rna-XM_014644554.2 vs. Araport11
Match: AT2G14210.2 (| AGAMOUS-like 44 | Chr2:6018841-6023564 FORWARD LENGTH=235 | 201606)

HSP 1 Score: 127.872 bits (320), Expect = 3.968e-36
Identity = 76/171 (44.44%), Postives = 113/171 (66.08%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSS-SSMNDIITKYNTHSPGMDKLDRPSLEL-----QLETTSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLK 165
            M R KI I++IDN T+RQVTFSKRR GL KKA+ELS+LCDA+VG+I+FSSTGKL+DY+S SSM  II +YN       +L   + E+     ++ +  +  + + E  R+L    G++L G++ N+LQ LE +L + L  V   K++ M  +I EL +KG ++++EN  L+
Sbjct:    1 MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASNSSMKTIIERYNRVKEEQHQLLNHASEIKFWQREVASLQQQLQYLQECHRKLV---GEELSGMNANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHELQ 168
[Close]
BLAST of rna-XM_014644554.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3U1X3|A0A1S3U1X3_VIGRR (MADS-box protein JOINTLESS OS=Vigna radiata var. radiata OX=3916 GN=LOC106761060 PE=4 SV=1)

HSP 1 Score: 466.077 bits (1198), Expect = 8.665e-166
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQLETTSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMDSNMGMQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLPFSN 231
            MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQLETTSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMDSNMGMQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLPFSN
Sbjct:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQLETTSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMDSNMGMQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLPFSN 231
[Close]
BLAST of rna-XM_014644554.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RCL1|A0A0S3RCL1_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G112900 PE=4 SV=1)

HSP 1 Score: 434.876 bits (1117), Expect = 1.917e-153
Identity = 221/231 (95.67%), Postives = 227/231 (98.27%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQLETTSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMDSNMGMQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLPFSN 231
            MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDII KYNTHSPGMDKLDRPSLE+QLET +KLSKEIAERT+ELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKL ETEMEA+LRKATM FLM+SNMGMQEEGVSLESTNNVSSCISDPP+EDGSSDTSLKLGLPFSN
Sbjct:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIIIKYNTHSPGMDKLDRPSLEMQLETATKLSKEIAERTQELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLAETEMEAVLRKATMHFLMESNMGMQEEGVSLESTNNVSSCISDPPLEDGSSDTSLKLGLPFSN 231
[Close]
BLAST of rna-XM_014644554.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6NQ33|A0A4D6NQ33_VIGUN (MADS-box transcription factor OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g2966 PE=4 SV=1)

HSP 1 Score: 420.624 bits (1080), Expect = 7.626e-148
Identity = 216/233 (92.70%), Postives = 225/233 (96.57%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQLETTSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEME--AMLRKATMRFLMDSNMGMQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLPFSN 231
            MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMN IITKYN+HSPG+DKLDRPSLE+QLETTSKLSKE+AERT+ELSWMKGD+LQGL L+ELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKL ETEME  AM+RK  M FLM+SNMGMQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLPFSN
Sbjct:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNGIITKYNSHSPGIDKLDRPSLEMQLETTSKLSKEVAERTQELSWMKGDNLQGLGLDELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLAETEMEAMAMVRKTKMHFLMESNMGMQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLPFSN 233
[Close]
BLAST of rna-XM_014644554.2 vs. UniProtKB/TrEMBL
Match: tr|V7ASP3|V7ASP3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G037300g PE=4 SV=1)

HSP 1 Score: 403.675 bits (1036), Expect = 4.929e-141
Identity = 209/232 (90.09%), Postives = 221/232 (95.26%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQLETT--SKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMDSNMGMQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLPFS 230
            MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLF+YSSSSMNDIITKYNTHSPG++KLDRPSLELQLE +  +KLSKEIA+RT+ELSWMKGDDLQGL LNELQQLEK LESGLDRVI+IKEKQMM QISELQKKGI+LEEEN+HLK+KLVETEMEAMLRKA M F+MDSNMGMQEEGV LESTNNVSS ISDP VEDGSSDTSLKLGLPFS
Sbjct:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFEYSSSSMNDIITKYNTHSPGINKLDRPSLELQLEASNSAKLSKEIADRTQELSWMKGDDLQGLGLNELQQLEKTLESGLDRVIQIKEKQMMSQISELQKKGILLEEENRHLKRKLVETEMEAMLRKAKMPFMMDSNMGMQEEGVLLESTNNVSSSISDPHVEDGSSDTSLKLGLPFS 232
[Close]
BLAST of rna-XM_014644554.2 vs. UniProtKB/TrEMBL
Match: tr|C6T8M2|C6T8M2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100776749 PE=2 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 3.075e-131
Identity = 190/234 (81.20%), Postives = 212/234 (90.60%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQLET--TSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMDSNMG-MQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLPFSN 231
            MTR +IKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDA+VGLIVFSSTGKLFDYSSSSMNDI+TKY+THS G++KLD+PSLELQLE   ++KLSKEIA+RT+ELSW+KGDDLQGL LNELQQLEK LE GLDRV +IKE Q+M QISELQKKGI+LEEENKHL KKL E E EAML KA + F++DS+ G MQEEGVSL+STNN+SSCISDPP+EDGSSD SL LGLPFSN
Sbjct:    1 MTRTRIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYSSSSMNDIVTKYSTHSHGINKLDKPSLELQLEASNSAKLSKEIADRTQELSWLKGDDLQGLGLNELQQLEKTLEIGLDRVTDIKENQIMSQISELQKKGILLEEENKHLTKKLAEKEKEAMLCKAKIPFMVDSDKGIMQEEGVSLDSTNNISSCISDPPLEDGSSDISLTLGLPFSN 234
[Close]
BLAST of rna-XM_014644554.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445K775|A0A445K775_GLYSO (MADS-box protein SVP isoform A OS=Glycine soja OX=3848 GN=D0Y65_014221 PE=4 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 3.075e-131
Identity = 190/234 (81.20%), Postives = 212/234 (90.60%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQLET--TSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMDSNMG-MQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLPFSN 231
            MTR +IKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDA+VGLIVFSSTGKLFDYSSSSMNDI+TKY+THS G++KLD+PSLELQLE   ++KLSKEIA+RT+ELSW+KGDDLQGL LNELQQLEK LE GLDRV +IKE Q+M QISELQKKGI+LEEENKHL KKL E E EAML KA + F++DS+ G MQEEGVSL+STNN+SSCISDPP+EDGSSD SL LGLPFSN
Sbjct:    1 MTRTRIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYSSSSMNDIVTKYSTHSHGINKLDKPSLELQLEASNSAKLSKEIADRTQELSWLKGDDLQGLGLNELQQLEKTLEIGLDRVTDIKENQIMSQISELQKKGILLEEENKHLTKKLAEKEKEAMLCKAKIPFMVDSDKGIMQEEGVSLDSTNNISSCISDPPLEDGSSDISLTLGLPFSN 234
[Close]
BLAST of rna-XM_014644554.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371GH64|A0A371GH64_MUCPR (MADS-box protein SVP (Fragment) OS=Mucuna pruriens OX=157652 GN=SVP PE=4 SV=1)

HSP 1 Score: 359.762 bits (922), Expect = 3.481e-123
Identity = 197/265 (74.34%), Postives = 216/265 (81.51%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSS--------------------------------SMNDIITKYNTHSPGMDKLDRPSLELQLETT--SKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMDSNMGMQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLPFSN 231
            MTR+KIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDA+VGLIVFSSTGKLFDYSSS                                 MNDII +YNTHS G++KLDRPSLELQLE +  +KLSKEIA+RT+ELSWMKG++LQGL LNELQQLEK+LE GLDRVIEIKEK+MM QISELQKK I+LEEENKHLKKKL E EMEAM RKA + F+ DS+MGMQEEGVSLES NN+SSCISDPP+EDGSSDTSLKLGLPFSN
Sbjct:    1 MTRSKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYSSSRYVRHHRTLLTFLSVFIYIYIINKYIYNYTCIDMNDIIRRYNTHSHGINKLDRPSLELQLEASNSAKLSKEIADRTQELSWMKGEELQGLGLNELQQLEKRLEIGLDRVIEIKEKRMMNQISELQKKEILLEEENKHLKKKLEEREMEAM-RKAKIAFMADSDMGMQEEGVSLESPNNISSCISDPPLEDGSSDTSLKLGLPFSN 264
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BLAST of rna-XM_014644554.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445K781|A0A445K781_GLYSO (MADS-box protein SVP isoform C OS=Glycine soja OX=3848 GN=D0Y65_014221 PE=4 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 2.018e-118
Identity = 178/234 (76.07%), Postives = 199/234 (85.04%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQLET--TSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMDSNMG-MQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLPFSN 231
            MTR +IKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDA+VGLIVFSSTGKLFDYSSSSMNDI+TKY+THS G++KLD+PSLELQLE   ++KLSKEIA+RT+ELSW+KGDDLQGL LNELQQLEK LE GLDRV +IKE Q+M QISELQ              KKL E E EAML KA + F++DS+ G MQEEGVSL+STNN+SSCISDPP+EDGSSD SL LGLPFSN
Sbjct:    1 MTRTRIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYSSSSMNDIVTKYSTHSHGINKLDKPSLELQLEASNSAKLSKEIADRTQELSWLKGDDLQGLGLNELQQLEKTLEIGLDRVTDIKENQIMSQISELQ--------------KKLAEKEKEAMLCKAKIPFMVDSDKGIMQEEGVSLDSTNNISSCISDPPLEDGSSDISLTLGLPFSN 220
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BLAST of rna-XM_014644554.2 vs. UniProtKB/TrEMBL
Match: tr|K7KU70|K7KU70_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100776749 PE=4 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 2.018e-118
Identity = 178/234 (76.07%), Postives = 199/234 (85.04%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQLET--TSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMDSNMG-MQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLPFSN 231
            MTR +IKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDA+VGLIVFSSTGKLFDYSSSSMNDI+TKY+THS G++KLD+PSLELQLE   ++KLSKEIA+RT+ELSW+KGDDLQGL LNELQQLEK LE GLDRV +IKE Q+M QISELQ              KKL E E EAML KA + F++DS+ G MQEEGVSL+STNN+SSCISDPP+EDGSSD SL LGLPFSN
Sbjct:    1 MTRTRIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYSSSSMNDIVTKYSTHSHGINKLDKPSLELQLEASNSAKLSKEIADRTQELSWLKGDDLQGLGLNELQQLEKTLEIGLDRVTDIKENQIMSQISELQ--------------KKLAEKEKEAMLCKAKIPFMVDSDKGIMQEEGVSLDSTNNISSCISDPPLEDGSSDISLTLGLPFSN 220
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BLAST of rna-XM_014644554.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445K787|A0A445K787_GLYSO (MADS-box protein SVP isoform E OS=Glycine soja OX=3848 GN=D0Y65_014221 PE=4 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 3.068e-108
Identity = 169/232 (72.84%), Postives = 190/232 (81.90%), Query Frame = 0 
Query:    1 MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSSTGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQLETTSKLSKEIAERTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISELQKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMDSNMG-MQEEGVSLESTNNVSSCISDPPVEDGSSDTSLKLGLPFSN 231
            MTR +IKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDA+VGLIVFSSTGKLFDYSSS       +Y  +   +         L+   ++KLSKEIA+RT+ELSW+KGDDLQGL LNELQQLEK LE GLDRV +IKE Q+M QISELQKKGI+LEEENKHL KKL E E EAML KA + F++DS+ G MQEEGVSL+STNN+SSCISDPP+EDGSSD SL LGLPFSN
Sbjct:    1 MTRTRIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYSSS-------RY-VYGRRL---------LEASNSAKLSKEIADRTQELSWLKGDDLQGLGLNELQQLEKTLEIGLDRVTDIKENQIMSQISELQKKGILLEEENKHLTKKLAEKEKEAMLCKAKIPFMVDSDKGIMQEEGVSLDSTNNISSCISDPPLEDGSSDISLTLGLPFSN 215
The following BLAST results are available for this feature:
BLAST of rna-XM_014644554.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q9FUY6|JOIN_SOLLC3.545e-7855.46MADS-box protein JOINTLESS OS=Solanum lycopersicum... [more]
sp|Q9FVC1|SVP_ARATH2.588e-7753.53MADS-box protein SVP OS=Arabidopsis thaliana OX=37... [more]
sp|O82794|AGL24_ARATH1.484e-7056.28MADS-box protein AGL24 OS=Arabidopsis thaliana OX=... [more]
sp|Q9XJ66|MAD22_ORYSJ3.836e-6651.95MADS-box transcription factor 22 OS=Oryza sativa s... [more]
sp|Q5K4R0|MAD47_ORYSJ3.756e-6249.56MADS-box transcription factor 47 OS=Oryza sativa s... [more]
sp|Q69TG5|MAD55_ORYSJ5.082e-5746.86MADS-box transcription factor 55 OS=Oryza sativa s... [more]
sp|Q6EP49|MAD27_ORYSJ3.450e-4043.53MADS-box transcription factor 27 OS=Oryza sativa s... [more]
sp|Q9SZJ6|AGL21_ARATH2.101e-3943.32Agamous-like MADS-box protein AGL21 OS=Arabidopsis... [more]
sp|Q40872|AG_PANGI3.976e-3841.71Floral homeotic protein AGAMOUS OS=Panax ginseng O... [more]
sp|Q9XGJ4|GGM13_GNEGN4.610e-3846.55MADS-box protein GGM13 OS=Gnetum gnemon OX=3382 GN... [more]
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BLAST of rna-XM_014644554.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
AT2G22540.32.648e-7853.53| K-box region and MADS-box transcription factor f... [more]
AT2G22540.12.648e-7853.53| K-box region and MADS-box transcription factor f... [more]
AT2G22540.22.698e-7452.70| K-box region and MADS-box transcription factor f... [more]
AT4G24540.11.518e-7156.28| AGAMOUS-like 24 | Chr4:12671160-12673645 REVERSE... [more]
AT4G37940.12.149e-4043.32| AGAMOUS-like 21 | Chr4:17835695-17838621 REVERSE... [more]
AT3G57230.44.504e-3842.94| AGAMOUS-like 16 | Chr3:21177710-21180671 FORWARD... [more]
AT3G57230.14.504e-3842.94| AGAMOUS-like 16 | Chr3:21177710-21180671 FORWARD... [more]
AT4G37940.41.614e-3744.12| AGAMOUS-like 21 | Chr4:17835695-17838621 REVERSE... [more]
AT2G14210.13.666e-3635.80| AGAMOUS-like 44 | Chr2:6018841-6023585 FORWARD L... [more]
AT2G14210.23.968e-3644.44| AGAMOUS-like 44 | Chr2:6018841-6023564 FORWARD L... [more]
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BLAST of rna-XM_014644554.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3U1X3|A0A1S3U1X3_VIGRR8.665e-166100.00MADS-box protein JOINTLESS OS=Vigna radiata var. r... [more]
tr|A0A0S3RCL1|A0A0S3RCL1_PHAAN1.917e-15395.67Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A4D6NQ33|A0A4D6NQ33_VIGUN7.626e-14892.70MADS-box transcription factor OS=Vigna unguiculata... [more]
tr|V7ASP3|V7ASP3_PHAVU4.929e-14190.09Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|C6T8M2|C6T8M2_SOYBN3.075e-13181.20Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A445K775|A0A445K775_GLYSO3.075e-13181.20MADS-box protein SVP isoform A OS=Glycine soja OX=... [more]
tr|A0A371GH64|A0A371GH64_MUCPR3.481e-12374.34MADS-box protein SVP (Fragment) OS=Mucuna pruriens... [more]
tr|A0A445K781|A0A445K781_GLYSO2.018e-11876.07MADS-box protein SVP isoform C OS=Glycine soja OX=... [more]
tr|K7KU70|K7KU70_SOYBN2.018e-11876.07Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A445K787|A0A445K787_GLYSO3.068e-10872.84MADS-box protein SVP isoform E OS=Glycine soja OX=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 23..38
score: 76.85
coord: 38..59
score: 58.97
coord: 3..23
score: 58.28
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 10..57
e-value: 8.0E-25
score: 86.1
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 1..61
score: 29.436047
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 90..168
e-value: 1.3E-15
score: 57.3
IPR002487Transcription factor, K-boxPROSITEPS51297K_BOXcoord: 84..174
score: 13.921567
IPR036879Transcription factor, MADS-box superfamilyGENE3D3.40.1810.10coord: 14..106
e-value: 8.1E-28
score: 98.3
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILY55455SRF-likecoord: 2..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..226
NoneNo IPR availablePANTHERPTHR48019SERUM RESPONSE FACTOR HOMOLOGcoord: 3..171
IPR033896MADS MEF2-likeCDDcd00265MADS_MEF2_likecoord: 12..73
e-value: 5.47041E-34
score: 115.342

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014644554.2_VrVC1973A-SNU_v1 ID=rna-XM_014644554.2_VrVC1973A-SNU_v1; Name=rna-XM_014644554.2; organism=Vigna radiata; type=mRNA; length=696bp
ATGACGAGGGCTAAGATAAAGATAAAGAAAATCGACAACATAACGGCTAG
GCAAGTAACATTTTCTAAGAGAAGGCGAGGGTTGTTCAAGAAAGCTGAAG
AGCTATCTGTGCTGTGTGATGCGGATGTTGGTCTCATAGTTTTCTCATCT
ACCGGGAAGCTCTTTGATTATAGCAGTTCCAGTATGAATGACATAATTAC
CAAGTATAATACGCATTCCCCTGGCATGGACAAATTGGACAGGCCATCAC
TAGAACTGCAGCTAGAGACTACCTCCAAATTGAGTAAGGAAATTGCAGAA
AGAACTCGAGAACTAAGTTGGATGAAAGGCGATGATCTTCAAGGGCTAAG
CCTAAATGAGTTGCAGCAACTGGAGAAAAAACTTGAAAGTGGACTCGACC
GTGTGATTGAGATAAAGGAAAAGCAGATGATGGGTCAGATTTCTGAACTT
CAGAAAAAGGGAATCGTGTTGGAAGAAGAGAACAAGCATTTAAAGAAAAA
GCTAGTGGAGACGGAGATGGAGGCTATGCTGCGTAAAGCAACAATGCGTT
TTTTGATGGACTCAAACATGGGAATGCAAGAAGAAGGTGTTTCATTAGAG
TCGACAAACAACGTTAGCAGTTGCATCAGTGACCCTCCTGTTGAAGATGG
TTCCTCGGACACATCTCTCAAGTTAGGGTTACCCTTCTCTAACTGA
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protein sequence of rna-XM_014644554.2_VrVC1973A-SNU_v1

>rna-XM_014644554.2_VrVC1973A-SNU_v1 ID=rna-XM_014644554.2_VrVC1973A-SNU_v1; Name=rna-XM_014644554.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=231bp
MTRAKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSS
TGKLFDYSSSSMNDIITKYNTHSPGMDKLDRPSLELQLETTSKLSKEIAE
RTRELSWMKGDDLQGLSLNELQQLEKKLESGLDRVIEIKEKQMMGQISEL
QKKGIVLEEENKHLKKKLVETEMEAMLRKATMRFLMDSNMGMQEEGVSLE
STNNVSSCISDPPVEDGSSDTSLKLGLPFSN
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mRNA from alignment at chr05:15644814..15651413+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014644554.2_VrVC1973A-SNU_v1 ID=rna-XM_014644554.2_VrVC1973A-SNU_v1; Name=rna-XM_014644554.2; organism=Vigna radiata; type=mRNA; length=6600bp; location=Sequence derived from: chr05:15644814..15651413+ (Vigna radiata
aaagataagataaaaaagtaattagcaatgaaaatagaaagagtTGAGCA
TATTTAGCTATCTATAAAGGGAAGGGTTTCTTTCCTTTATTGATATGAAG
GCAGCATCCCAATCAAGgttatctttctttctctctcttctgtgTCTCTC
ACTGTGTTACTGACTCCTAAAAGTTCTTTCTCTTcacactttctttcttt
gttacTAAATCTGATTGGAGCAACATTTTCTTAGTTTTTCCCCTTTCAGC
ACAAATCAAAAATAGTGCTACATACACTTTTCCACTAGCTTCAACCATAT
AAATCAACCATTTGAAATCAAAACCCACCAATCCAAACCTCTCAAATCCT
TGTATCTTCTCAAATCCTTTGGGTGGTAGGTTCCTTTTTCTGTTCCCCTT
ATCCAGATCTGAAACTGGGTATGCCTTttattagggtttttttttttttt
ttttcaaagttgtGTAGGAACCAGTGTTCATCATTCCATatctattttca
tgttttcagACAAGTGTGAGAGTGTGTATTGAAAATAGgtattttaattc
agttttgtGCAGCTGAAAAAATGACGAGGGctaagataaagataaagaaa
atcgACAACATAACGGCTAGGCAAGTAACATTTTCTAAGAGAAGGCGAGG
GTTGTTCAAGAAAGCTGAAGAGCTATCTGTGCTGTGTGATGCGGATGTTG
GTCTCATAGTTTTCTCATCTACCGGGAAGCTCTTTGATTATAGCAGTTCC
AGGTACGTACGGAAATAACATTGTATTACGCAACCGTGAATTTTCTCTCA
GTATTTGTATACATATACATGTATAAAGCATAATATTCTTACGTTGTTTT
CGATTAATACGTACAAGTGTGTTTGCGTGTTTGCTCTCCTTCCTATCCCA
ATTCCTGGTTTAGCTAATAGTGCCTGTAGTTTCTGTACGGAATGtgttag
agagagaaagagggatAGTGTATTAGGTGTAATCTCGTGATGGGTTTGGA
ACAAAAACCTCGTTTCGCTCGCTTGTGTTCTCATTTTATGGGAATTCAAT
AGTAGTCTATTGAAGTTTCCATGAAAGGTTGTGCTAGAAAAGAAAGTGCA
GCTGCATAAGTTTGGGTAATGATaaatagataacattttttgacaacatt
taaacatcaatCATATATGTCATTGTGtaattggtccaaatgacacaatt
tGATACTATCATGaatcaatcacacaatgacacgtatgatgatatttaaa
tgttatcaaaaaatgttgtgtaAGTATTTTTATCCGGATAAGTTTATAGT
TTTGGACTAGTTTAGTTCACTGAGTGTCGAATGTTGTAATATTGTTGTGC
AGTTGATGCACTTTTCCCAAAGAATCATGTGTGTAGGAAAGAAACTTCTT
ATATGAAAAATCATTCGACAAACACCAAAGAGGCAAGAAAtgtcaagaaa
aacaaattctcTTGGTCGGTAATTTCTTATAACTTGAGTATCAATGTAGA
ACATTCTTATTATATTAACGACAACTTTACTTACAATTTCTGAAGTATTC
TTGTTATATGTCTCAAAGTATAAACGATCAGAGATCTAATGAACTGTAAA
CCTTTCTGTATATATGGTTTCTCTTGAACTTTTGCTAATGTCAGACATTG
ATGCTAATTTTCCGGGTACAAACAGAAATTATAGGATATAAGAGGAAAAT
GGTGTCAGAATTCGAAATGACACAATGAGTGTGCTTGGTTGGAACAAACA
AACTGGTCAATAGagtgataaaataatatttgcacAAAAGGTTAAACAAC
AATTTTCTCCGCACTCATGAGTATGTTTTGAGAAAATATTACAGTCAACT
TTTTCATTTACAAcgatattttatttactttaatatttttgcttATTACC
TTTTATATATCTTCCTTCCTCACATGattaatctttttctcttctctctc
tatatatttaTCCTTAtctgtaaaaataaaagttgagtAGCACCACACAT
GGTTGAATATGCATCTCCATTTGCAATCTTTGACATAGGGAATTAGGTTT
TAGGAAGCAAGATGAGGGCTACGGTTTCAGGAAAAGTTTGCATATATATG
TAACACAAAATTTTTGTGTTCTTTCTTCTATTGTTTTGgttaatttaaat
caaatcaaaatataataaactaaaatagtaGTAATGGAAATTATACAGca
tttaaataaacatataaatataacataataaactgaatcaaacatattat
atatatgataaattaaataataataataattgaaataacaGCAAATTTCA
TAATAGCAATTATCTCATTATAGTAGTTCTGGGGCTGGTCATTTTGCATT
GTGTATTACTATTGAAAAGGTTTATGACAGCTATTGTTTATAAATGGATT
GGAATACCTTGTAACCTTGTCTAATGCTATGTGTCTTTGTTGTAGATTTT
ATTGttcaaaattgataaatattatgtATTGCTTCCATATGTCAACTATA
TCTTTCCTTAAATGAAGTTGAAATTCGTGAATTTagaataagaaatatat
attctactataattttaattgttttattagcTAGAATCTTGGAACTTGGA
ATTAAATATGTACTTGAATAAAAGCCCTAAATTCTCAAAATACTTCTATT
GGTGagggaattttttttaaaataatttcatcattATCAGAAATGAGCAG
TGTGAGAAATATACATTTAGTTATATTGATTTGGAAAATAATATGATTGC
TTTCTCGAAAAATTGTCTCTTTCATGTTTGGTTGAAGGGAAATATGCCCA
TACTATAATTAactttctgaaaaaaaaaattctaataaaaatcaaaagac
AAGTAAAGTATATTGTAAATAGTtcagaaataaataaagaaactaCATCT
TGGTACAGTGACATTTACAGTAAGAACAGAATAATCTCtatgtatttaaa
taaataaatcttgtGTATTTGAAAgcataataataatcatttatatataa
aaataatataggtTGAAGTTGCTTTACTCAAATTTAAACGTGAAGGAATT
CGATATGAGGTTTAAATTGGTTGAAGCTCGCGAAAATAAGGGAATAGAGA
CATTGTGTCAAATGATAGATAATTTATGCTgcatcaatttttctttaaga
tatatagtttttttcttatgtGTTACTTTTTCAATAGTTATCAAATGTCA
AACTTTATATTGATTAGTCAATAGATCTGTATAAAAAGTCTAgattatac
ataaaatatttttcttccagCAATTCTTTTATATCAGTTAACTGATAGAA
AAGATTAAATACTATGTGAGCATCGTTCATTCCATATGTATACtaattac
tttttgtttctGTGTTATGggaagattttttatttttatttttgctaatG
TGAATATCAGGAATAAACTGTCAGAATTCTTTCTCTGTATACAGATAAGA
TATTTTTCATATGTCGTGCTCCTTCTGCAAATTGCATAagaattatgaat
ttattatacGTATGCATGGATTAATTACGTAAACCAGCCAATTCACCCAT
GAAAACCAGTCTTGATATATGCAATGCCAACTTGTATATATACTTATCCA
TTATTTTTCTCTCGAGAAaatgcattttatttaaacttttctgctaactt
tttattttctgtctttttgTTTTGGTCTTGTATAGTATGAATGACATAAT
TACCAAGTATAATACGCATTCCCCTGGCATGGACAAATTGGACAGGCCAT
CACTAGAACTGCAGGTTGTacaaaaaaatatgttcttatattttgctttt
ctctttttattagttGTGATTGTGCAGAGACTTACACCACAAAACTTCTT
GGAGAGCAAAgcatatatattatgtaattgATCTAATTATTCTTATATAC
tatgttattattatgttattattattaattacttgaAAGAGGTGTGTGAT
aatcaaataaacaattttcaaaattttaggcTGAAGTAACACTAACTGCT
GATAAGTAACTGCACAAGTTTAATTGTTGATTTTTCAGCTAGAGACTACC
TCCAAATTGAGTAAGGAAATTGCAGAAAGAACTCGAGAACTAAGGTAAtc
cttttgaatattttttttatcgttCTCGGTGGTATCAACATGCCACTGTG
TTGGGATATCTTATCATTTCTCCgagaaaatagatatatatgaattttgt
caaaaaaaaaaaatgataggtttaaacttctttttggtccctaagttata
agcggatgttcagtttagtctccgtttttaaaaatgtaaatctttgatcc
ctaagttataaaaaatgtataaaatgagtccttttttgacttgaaatact
gtttttggttgtttcttaacaactgctacatctttagattgctctgattt
gtttcttaataataacaacactttaaattgctctttgtactttgactatg
aacatcaaaaaaggactcatttgatacattttttataacttaggaatcaa
aggtttacatttttaaaagcggggaatAAACTGAACCTCCgttcataact
tagggaccaaaaataggtttaaaccaaaatgatattttaacacataattt
tttacattcatttaatattattttttcttactttttacttttttttttga
aaaactacaaaaattcactcttttaaagttattttatctttattagatat
atcaaatgaatgtcaATCTGTGTTATGTTATCTTACttttttgtgaaaga
aaaaaagaaaaaacttgaaGAATAATGGGATGAAGTAAAATACGTTGTGT
TTATGTTTTGAACGATTAGTTGGATGAAAGGCGATGATCTTCAAGGGCTA
AGCCTAAATGAGTTGCAGCAACTGGAGAAAAAACTTGAAAGTGGACTCGA
CCGTGTGATTGAGATAAAGGTAAGAACATAATTTCATTTGGTTAAGCTGC
ATGTTTTGATCAGTGATTCATATATACCAACTCATTTCAACTTTTTCCTT
CAGGAAAAGCAGATGATGGGTCAGATTTCTGAACTTCAGAAAAAGgtgct
ttatatatatatatatatatatatatatatatatatatataataacttga
TGATGCACGCAGTTAGTATCTTCACACAGATTAGTATAATCATCTGGTCC
TTAAGATAATCTTCCATAGTTCTTGCTGCCTGAATATCAGTTAGTGCTTC
CTTTAGTGAATATCACCACAAATTCGATAACCTAGTTAAGTTAGGTTAAA
AATTCTACatcgattaaagataaaattattgtaaaatgtATCTTACAAAT
GATATTGATTTAGACTTAAAGTCTATTTCTTAACACGctataatcatata
attaaaagttagtgttttaattatataataatgttcATGTTCAAGTAGAT
ACAATTTATAAACCGATTTTTTTAGgttaagttaggtttaaaatttattt
ttttaccatcTTATAAGCATATAATTAGAAATTAGTGTTTTAGTTCTATC
ATAATGTTCATATTCAAGTAAATTTAGGGCTAGATTTTTCAAGGTTTAGT
TAGtaacttcaaaattttgagattgttttgctttcttttctGTCTGCTAA
AGGGAATCGTGTTGGAAGAAGAGAACAAGCATTTAAAGAAAAAGGTGAGA
ACTCAATGACTCACTCTATCTGTTTACTTAGGTTTATgtgtttgcttttt
tttttcttttttttttttagttaaaatattgaGTAATAATATTACGAcac
ttttttacattcattcgaCACATAATACAAGGGTAAAACAGTTTaaaaag
tgtaaagttttatagtttttcaagaaagaagagaataaaaaataaataac
agtagtgtcaaatgaatgtaaaaaatttagatttctcaaagaatattttt
tctaaaatgttaCATTAATTAATCAGCTAGTGGAGACGGAGATGGAGGCT
ATGCTGCGTAAAGCAACAATGCGTTTTTTGATGGACTCAAACATGGGAAT
GCAAGAAGAAGGTGTTTCATTAGAGTCGACAAACAACGTTAGCAGTTGCA
TCAGTGACCCTCCTGTTGAAGATGGTTCCTCGGACACATCTCTCAAGTTA
GGGTAAGCAAAACCACCAAACACTAACAACTAACgaaaaatctttttaac
aattttttgacaacacatatgTAATGACTTGTTATTGAGctgttttgaat
atttttttgaaaataaattcaaacataccaatttaataaagaaaaatgtt
ttttgacACCATAAGTATTCCAGTCACTAAAATAgttcatttttatattc
ataaaaaaagaaagaaattgaaagataacataataatgtaaaatgtcTGT
AAAATTTATTCAGTGTGAAAATAATACTACTAAATTTGCAAATACCGTTA
CTTTGACAcaagtcctttttttttttttttcaggttaCCCTTCTCTAACT
GAAGATAATGTAACATGGTGAATGAGCCATGTTCGGCTTCAAGTTTGTAA
GAATTTCTCTTGAAATCTGTAacaacttgtttttcttttcgtaAGTGAGA
AATGTATGCTTAGCTAtcaaaaatcaatgaaatatataaatatatattta
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Coding sequence (CDS) from alignment at chr05:15644814..15651413+

>rna-XM_014644554.2_VrVC1973A-SNU_v1 ID=rna-XM_014644554.2_VrVC1973A-SNU_v1; Name=rna-XM_014644554.2; organism=Vigna radiata; type=CDS; length=696bp; location=Sequence derived from: chr05:15644814..15651413+ (Vigna radiata
ATGACGAGGGctaagataaagataaagaaaatcgACAACATAACGGCTAG
GCAAGTAACATTTTCTAAGAGAAGGCGAGGGTTGTTCAAGAAAGCTGAAG
AGCTATCTGTGCTGTGTGATGCGGATGTTGGTCTCATAGTTTTCTCATCT
ACCGGGAAGCTCTTTGATTATAGCAGTTCCAGTATGAATGACATAATTAC
CAAGTATAATACGCATTCCCCTGGCATGGACAAATTGGACAGGCCATCAC
TAGAACTGCAGCTAGAGACTACCTCCAAATTGAGTAAGGAAATTGCAGAA
AGAACTCGAGAACTAAGTTGGATGAAAGGCGATGATCTTCAAGGGCTAAG
CCTAAATGAGTTGCAGCAACTGGAGAAAAAACTTGAAAGTGGACTCGACC
GTGTGATTGAGATAAAGGAAAAGCAGATGATGGGTCAGATTTCTGAACTT
CAGAAAAAGGGAATCGTGTTGGAAGAAGAGAACAAGCATTTAAAGAAAAA
GCTAGTGGAGACGGAGATGGAGGCTATGCTGCGTAAAGCAACAATGCGTT
TTTTGATGGACTCAAACATGGGAATGCAAGAAGAAGGTGTTTCATTAGAG
TCGACAAACAACGTTAGCAGTTGCATCAGTGACCCTCCTGTTGAAGATGG
TTCCTCGGACACATCTCTCAAGTTAGGgttaCCCTTCTCTAACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002100TF_MADSbox
IPR002487TF_Kbox
IPR036879TF_MADSbox_sf
IPR033896MADS_MEF2-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
GO:0003700DNA-binding transcription factor activity
GO:0000977RNA polymerase II transcription regulatory region sequence-specific DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription
GO:0045944positive regulation of transcription by RNA polymerase II