rna-XM_014644850.2

Transcript Overview
Namerna-XM_014644850.2
Unique Namerna-XM_014644850.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length579
Productuncharacterized LOC106761310
References
External references for this mRNA
DatabaseAccession
GeneID106761310
GenbankXM_014644850.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr05chromosomechr05:18157346..18160150 -Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anvrvL0313Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0357Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvrvL488Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0703Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0933Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivrvL352Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivrvL500Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL304Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL409Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvrvL0132Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0453Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL065Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvrvL341Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvrvL034Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL404Pisum sativum Cameor genome v1aPisum sativum
psvrvL507Pisum sativum Cameor genome v1aPisum sativum
pvvrvL743Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL258Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL354Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL359Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvrvR164Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvL266Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL272Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL369Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR445Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR462Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR468Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR490Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR506Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvzwsR385Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR344Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuaR351Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR425Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR391Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvzwsR437Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR372Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR398Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvrvL280Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL385Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL441Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL586Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL280Cicer arietinum
carvrvL397Cicer arietinum
ccavrvL319Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL451Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR350Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR371Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR394Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR406Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR427Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR482Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR347Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR383Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR395Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL221Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL285Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL031Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL300Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL425Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL692Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR367Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR375Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
jg55451.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun09g206300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Va04G062870.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_13991Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigan.02G084200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vfaba.Hedin2.R1.2g186920.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
LR48_mrnaVigan04g215100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Cr_03015.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
evm.model.Chr09.1643Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigst.02G065000.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vum_02G00689.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat05G0098600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
PvulFLAVERTChr09.686Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Ca_15029.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
XM_058929857.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vfaba.Tiffany.R1.2g150760.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun09g206300.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Psat5g027160.1Pisum sativum Cameor genome v1aPisum sativum
rna-KK1_042305Cajanus cajan Asha genome v1.0Cajanus cajan
Ca_01786Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106761310gene-LOC106761310_VrVC1973A-SNU_v1Vigna radiatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014644850.2_VrVC1973A-SNU_v1rna-XM_014644850.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014644850.2_VrVC1973A-SNU_v1rna-XM_014644850.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014644850.2-7exon-XM_014644850.2-7_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014644850.2-6exon-XM_014644850.2-6_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014644850.2-5exon-XM_014644850.2-5_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014644850.2-4exon-XM_014644850.2-4_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014644850.2-3exon-XM_014644850.2-3_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014644850.2-2exon-XM_014644850.2-2_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014644850.2-1exon-XM_014644850.2-1_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014500336.1cds-XP_014500336.1_VrVC1973A-SNU_v1_6Vigna radiataCDS
cds-XP_014500336.1cds-XP_014500336.1_VrVC1973A-SNU_v1_5Vigna radiataCDS
cds-XP_014500336.1cds-XP_014500336.1_VrVC1973A-SNU_v1_4Vigna radiataCDS
cds-XP_014500336.1cds-XP_014500336.1_VrVC1973A-SNU_v1_3Vigna radiataCDS
cds-XP_014500336.1cds-XP_014500336.1_VrVC1973A-SNU_v1_2Vigna radiataCDS
cds-XP_014500336.1cds-XP_014500336.1_VrVC1973A-SNU_v1Vigna radiataCDS


Homology
[Close]
BLAST of rna-XM_014644850.2 vs. Araport11
Match: AT2G25605.1 (| DNA-directed RNA polymerase subunit beta | Chr2:10899541-10900875 FORWARD LENGTH=200 | 201606)

HSP 1 Score: 299.286 bits (765), Expect = 1.558e-104
Identity = 145/200 (72.50%), Postives = 168/200 (84.00%), Query Frame = 0 
Query:    1 MSFGSSLLSHPHSVRFL----FNNTG----NSRFKAAAEVPDSLSEDWFKSRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFAGGLAY 192
            MSFGS +L  P S        FN  G    N    ++++VPD LS DW +SR+KRPFGPRLDFSAEDAV +QL+ALKYND PR DYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHS+YRVLLGHK+RK++S+LFVEEN++KQR+WI+G+RPEEEEIF+FTM QR+GG WDGYWLTESLLHD D F+GG+AY
Sbjct:    1 MSFGSLVLPSPPSSLSANVKHFNGYGRLNRNLVRASSSDVPDFLSADWLESRRKRPFGPRLDFSAEDAVRHQLDALKYNDHPRDDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSSYRVLLGHKDRKLLSSLFVEENRFKQRIWIQGNRPEEEEIFEFTMFQRIGGSWDGYWLTESLLHDGDVFSGGMAY 200
[Close]
BLAST of rna-XM_014644850.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3U2U5|A0A1S3U2U5_VIGRR (uncharacterized protein LOC106761310 OS=Vigna radiata var. radiata OX=3916 GN=LOC106761310 PE=4 SV=1)

HSP 1 Score: 399.823 bits (1026), Expect = 6.690e-141
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0 
Query:    1 MSFGSSLLSHPHSVRFLFNNTGNSRFKAAAEVPDSLSEDWFKSRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFAGGLAY 192
            MSFGSSLLSHPHSVRFLFNNTGNSRFKAAAEVPDSLSEDWFKSRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFAGGLAY
Sbjct:    1 MSFGSSLLSHPHSVRFLFNNTGNSRFKAAAEVPDSLSEDWFKSRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFAGGLAY 192
[Close]
BLAST of rna-XM_014644850.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RC50|A0A0S3RC50_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G084200 PE=4 SV=1)

HSP 1 Score: 396.741 bits (1018), Expect = 1.135e-139
Identity = 191/192 (99.48%), Postives = 191/192 (99.48%), Query Frame = 0 
Query:    1 MSFGSSLLSHPHSVRFLFNNTGNSRFKAAAEVPDSLSEDWFKSRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFAGGLAY 192
            MSFGSSLLSHPHSVRFLFNNTGNSRFKAAAEVPDSLSEDWFKSRKKRPFGPRLDFSAEDAVHYQLEALK NDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFAGGLAY
Sbjct:    1 MSFGSSLLSHPHSVRFLFNNTGNSRFKAAAEVPDSLSEDWFKSRKKRPFGPRLDFSAEDAVHYQLEALKCNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFAGGLAY 192
[Close]
BLAST of rna-XM_014644850.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UGV2|A0A0L9UGV2_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan04g215100 PE=4 SV=1)

HSP 1 Score: 396.741 bits (1018), Expect = 1.135e-139
Identity = 191/192 (99.48%), Postives = 191/192 (99.48%), Query Frame = 0 
Query:    1 MSFGSSLLSHPHSVRFLFNNTGNSRFKAAAEVPDSLSEDWFKSRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFAGGLAY 192
            MSFGSSLLSHPHSVRFLFNNTGNSRFKAAAEVPDSLSEDWFKSRKKRPFGPRLDFSAEDAVHYQLEALK NDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFAGGLAY
Sbjct:    1 MSFGSSLLSHPHSVRFLFNNTGNSRFKAAAEVPDSLSEDWFKSRKKRPFGPRLDFSAEDAVHYQLEALKCNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFAGGLAY 192
[Close]
BLAST of rna-XM_014644850.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6NQV7|A0A4D6NQV7_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g3226 PE=4 SV=1)

HSP 1 Score: 395.201 bits (1014), Expect = 3.966e-139
Identity = 190/192 (98.96%), Postives = 191/192 (99.48%), Query Frame = 0 
Query:    1 MSFGSSLLSHPHSVRFLFNNTGNSRFKAAAEVPDSLSEDWFKSRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFAGGLAY 192
            MSFGSSLLSHPHSVRFLFNNTGNSRFKAAAEVPD LSEDWFKSRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTF+GGLAY
Sbjct:    1 MSFGSSLLSHPHSVRFLFNNTGNSRFKAAAEVPDFLSEDWFKSRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFSGGLAY 192
[Close]
BLAST of rna-XM_014644850.2 vs. UniProtKB/TrEMBL
Match: tr|V7ATY5|V7ATY5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G096100g PE=4 SV=1)

HSP 1 Score: 382.489 bits (981), Expect = 5.041e-134
Identity = 184/192 (95.83%), Postives = 187/192 (97.40%), Query Frame = 0 
Query:    1 MSFGSSLLSHPHSVRFLFNNTGNSRFKAAAEVPDSLSEDWFKSRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFAGGLAY 192
            MSFGSSLLSHPHSVRFLFN+ G SRFKAAAEVPD LSEDWFKSR+KRPFGPRLDFSAEDAVHYQLEALK NDQPR+DYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVW RGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFAGGLAY
Sbjct:    1 MSFGSSLLSHPHSVRFLFNSKGTSRFKAAAEVPDFLSEDWFKSRQKRPFGPRLDFSAEDAVHYQLEALKNNDQPREDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWFRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFAGGLAY 192
[Close]
BLAST of rna-XM_014644850.2 vs. UniProtKB/TrEMBL
Match: tr|A0A151R209|A0A151R209_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_042305 PE=4 SV=1)

HSP 1 Score: 376.711 bits (966), Expect = 8.564e-132
Identity = 180/192 (93.75%), Postives = 184/192 (95.83%), Query Frame = 0 
Query:    1 MSFGSSLLSHPHSVRFLFNNTGNSRFKAAAEVPDSLSEDWFKSRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFAGGLAY 192
            MSFGSSLLS PH+VR   NN   SRF+AAAEVPDSLS DWF+SRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTF+GGLAY
Sbjct:    1 MSFGSSLLSRPHAVRLCSNNIRTSRFRAAAEVPDSLSADWFESRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFSGGLAY 192
[Close]
BLAST of rna-XM_014644850.2 vs. UniProtKB/TrEMBL
Match: tr|I1K8Y6|I1K8Y6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_06G071600 PE=4 SV=1)

HSP 1 Score: 364.77 bits (935), Expect = 5.876e-127
Identity = 175/192 (91.15%), Postives = 180/192 (93.75%), Query Frame = 0 
Query:    1 MSFGSSLLSHPHSVRFLFNNTGNSRFKAAAEVPDSLSEDWFKSRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFAGGLAY 192
            MSFGSSLLSH H+++FL N    SRFKA AEVPD LS DWF+SRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPR DYGIEVMYRFAGFDPFERS YFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTM Q+VGGCWDGYWLTESLLHDTDTFAGGLAY
Sbjct:    1 MSFGSSLLSHSHTLQFLSNRNRTSRFKATAEVPDFLSADWFESRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRPDYGIEVMYRFAGFDPFERSPYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMAQKVGGCWDGYWLTESLLHDTDTFAGGLAY 192
[Close]
BLAST of rna-XM_014644850.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2PFP6|A0A0B2PFP6_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_009007 PE=4 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 8.681e-126
Identity = 176/194 (90.72%), Postives = 181/194 (93.30%), Query Frame = 0 
Query:    1 MSFGSSLLSHPHSVRFLFNNTGN--SRFKAAAEVPDSLSEDWFKSRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFAGGLAY 192
            MSFGSSLLSH H++RFL NN  N  SRFKA A+VPD LS DWF+SRKK PFGPRLDFSAEDAVHYQLEALKYNDQPR DYGIEVMYRFAGFDPFERS YFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQ TMVQ+VGGCWDGYWLTESLLHDTDTFAGGLAY
Sbjct:    1 MSFGSSLLSHSHALRFLSNNNRNRTSRFKATAKVPDFLSADWFESRKKIPFGPRLDFSAEDAVHYQLEALKYNDQPRPDYGIEVMYRFAGFDPFERSPYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQLTMVQKVGGCWDGYWLTESLLHDTDTFAGGLAY 194
[Close]
BLAST of rna-XM_014644850.2 vs. UniProtKB/TrEMBL
Match: tr|C6TFN6|C6TFN6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 2.305e-125
Identity = 175/194 (90.21%), Postives = 181/194 (93.30%), Query Frame = 0 
Query:    1 MSFGSSLLSHPHSVRFLFNNT--GNSRFKAAAEVPDSLSEDWFKSRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFAGGLAY 192
            MSFGSSLLSH H++RFL NN   G SRFKA A+VPD LS DWF+SRKK PFGPRLDFSAEDAVHYQLEALKYNDQPR DYGIEVMYRFAGFDPFERS YFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQ TMVQ+VGGCWDGYWLTESLL+DTDTFAGGLAY
Sbjct:    1 MSFGSSLLSHSHALRFLSNNNRNGTSRFKATAQVPDFLSADWFESRKKIPFGPRLDFSAEDAVHYQLEALKYNDQPRPDYGIEVMYRFAGFDPFERSPYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQLTMVQKVGGCWDGYWLTESLLYDTDTFAGGLAY 194
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BLAST of rna-XM_014644850.2 vs. UniProtKB/TrEMBL
Match: tr|C6T2D1|C6T2D1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 1.530e-124
Identity = 173/192 (90.10%), Postives = 178/192 (92.71%), Query Frame = 0 
Query:    1 MSFGSSLLSHPHSVRFLFNNTGNSRFKAAAEVPDSLSEDWFKSRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFAGGLAY 192
            MSFGSSLLSH H+++FL N    SRFKA AEVPD LS D F+SRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPR DYGIEVMYRFAGFDPFERS YFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTL VEENKYKQRVWIRGSRPEEEEIFQFTM Q+VGGCWDGYWLTESLLHDTDTFAGGLAY
Sbjct:    1 MSFGSSLLSHSHTLQFLSNRNRTSRFKATAEVPDFLSADRFESRKKRPFGPRLDFSAEDAVHYQLEALKYNDQPRPDYGIEVMYRFAGFDPFERSPYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLLVEENKYKQRVWIRGSRPEEEEIFQFTMAQKVGGCWDGYWLTESLLHDTDTFAGGLAY 192
The following BLAST results are available for this feature:
BLAST of rna-XM_014644850.2 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of rna-XM_014644850.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G25605.11.558e-10472.50| DNA-directed RNA polymerase subunit beta | Chr2:... [more]
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BLAST of rna-XM_014644850.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3U2U5|A0A1S3U2U5_VIGRR6.690e-141100.00uncharacterized protein LOC106761310 OS=Vigna radi... [more]
tr|A0A0S3RC50|A0A0S3RC50_PHAAN1.135e-13999.48Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9UGV2|A0A0L9UGV2_PHAAN1.135e-13999.48Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A4D6NQV7|A0A4D6NQV7_VIGUN3.966e-13998.96Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|V7ATY5|V7ATY5_PHAVU5.041e-13495.83Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A151R209|A0A151R209_CAJCA8.564e-13293.75Uncharacterized protein OS=Cajanus cajan OX=3821 G... [more]
tr|I1K8Y6|I1K8Y6_SOYBN5.876e-12791.15Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A0B2PFP6|A0A0B2PFP6_GLYSO8.681e-12690.72Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|C6TFN6|C6TFN6_SOYBN2.305e-12590.21Uncharacterized protein OS=Glycine max OX=3847 PE=... [more]
tr|C6T2D1|C6T2D1_SOYBN1.530e-12490.10Uncharacterized protein OS=Glycine max OX=3847 PE=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35716OS05G0574700 PROTEIN-RELATEDcoord: 24..190

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014644850.2_VrVC1973A-SNU_v1 ID=rna-XM_014644850.2_VrVC1973A-SNU_v1; Name=rna-XM_014644850.2; organism=Vigna radiata; type=mRNA; length=579bp
ATGTCGTTTGGATCCTCTCTCTTGTCGCATCCGCATTCCGTTCGATTCTT
GTTCAACAACACCGGAAACTCTCGCTTCAAAGCCGCTGCCGAAGTTCCCG
ATTCCCTCTCCGAGGATTGGTTCAAATCTCGCAAGAAAAGGCCCTTTGGT
CCACGATTAGATTTTAGTGCAGAAGATGCGGTGCATTACCAGCTCGAAGC
CTTGAAGTATAACGATCAACCTCGTCAAGACTATGGAATCGAGGTTATGT
ACAGGTTCGCCGGATTTGATCCTTTTGAAAGGTCTACCTATTTTGGGCCT
TTCTTTGATTTGGGCCAGTTTGAAAGGTTTAGGCGTATTTTTCACCACTC
TACTTATCGAGTATTGCTAGGTCACAAGGAGAGAAAGATCATGAGCACTT
TGTTTGTCGAGGAGAACAAATACAAGCAGCGGGTTTGGATTCGTGGGAGT
CGACCGGAGGAAGAAGAGATATTTCAATTTACAATGGTTCAGAGGGTTGG
TGGATGCTGGGATGGTTACTGGTTGACAGAATCTCTGCTTCACGACACTG
ATACATTTGCTGGTGGATTAGCTTATTAA
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protein sequence of rna-XM_014644850.2_VrVC1973A-SNU_v1

>rna-XM_014644850.2_VrVC1973A-SNU_v1 ID=rna-XM_014644850.2_VrVC1973A-SNU_v1; Name=rna-XM_014644850.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=192bp
MSFGSSLLSHPHSVRFLFNNTGNSRFKAAAEVPDSLSEDWFKSRKKRPFG
PRLDFSAEDAVHYQLEALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGP
FFDLGQFERFRRIFHHSTYRVLLGHKERKIMSTLFVEENKYKQRVWIRGS
RPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFAGGLAY
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mRNA from alignment at chr05:18157346..18160150-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014644850.2_VrVC1973A-SNU_v1 ID=rna-XM_014644850.2_VrVC1973A-SNU_v1; Name=rna-XM_014644850.2; organism=Vigna radiata; type=mRNA; length=2805bp; location=Sequence derived from: chr05:18157346..18160150- (Vigna radiata
TTTTGAAAATAATCTTCAAGAGACCAAGAGAGACCATAGACGTCGTGCTC
AGAAGCTTGAAGAGAAAAGCGTTCATCTCAATCTTCAATTTTTTTTTTCT
TCTTCTTCTTCCCTTTCGTATCAGAGCCTTGAACGATGTCGTTTGGATCC
TCTCTCTTGTCGCATCCGCATTCCGTTCGATTCTTGTTCAACAACACCGG
AAACTCTCGCTTCAAAGCCGCTGCCGAAGTTCCCGATTCCCTCTCCGAGG
ATTGGTACCTATTCTTCCTTACATATATTCATCCAATTCCATTTTATTCT
CCAATATTCCGATTCCAACACCGCCTGCAGGTTCAAATCTCGCAAGAAAA
GGCCCTTTGGTCCACGATTAGATGTAATAATCACTGTCCACCACTTCCCC
TCTTCTCTTTCCTTTTCCTTTGTTCCTTTTCTGTTAAATCAATGTTTGGT
ATAGTTTAGTGCAGAAGATGCGGTGCATTACCAGCTCGAAGCCTTGAAGT
ATAACGATCAACCTCGTCAAGACTATGGAATCGAGGTTATGTACAGGTTC
GCCGGATTTGATCCTTTTGAAAGGTCTACCTATTTTGGGCCTTTCTTTGA
TTTGGGCCAGGTTCGTTCGTTCGTTCGTTCGTTATGTTAAAGTTGTGTTC
TTCTTTTAAAGTATCTAGAGGAAATTTACTAACTTCTGCAGTAAAGCCAT
GCTAATGGTAATTTTTTATTACTTCATTGAGTAAAACTTCGGTATACACA
TTCATTAGTCATGGTTACTTTACTGTTATTGAAATAATTTCTTGTTGAAA
TTCATGCTAAACAGTAATACACCTCTACATGTGCAGTTTGAAAGGTTTAG
GCGTATTTTTCACCACTCTACTTATCGAGTATTGCTAGGTCACAAGGAGA
GAAAGATCATGAGCACTTTGTTTGTCGAGGAGGTAGAATGTTTGTTCTTG
TTCAATTTTTTTTTTTTTTTTTTTTGTGTTATCTTAAAAAACTGATGTTA
TGGAATGATGAACTTCAAATAGAACAAATACAAGCAGCGGGTTTGGATTC
GTGGGAGTCGACCGGAGGAAGAAGAGATATTTCAATTTACAATGGTTCAG
GTTTGGTCATGATTTCTTCCGATACATCGTATCATCGTAGTCATGTTTGT
GAGGGATTTGGTGTTGTGTTTGGTTCATTTTGTTTGCAAAAATTGTTTAT
TTTTGTTTGGAAGTACGTAGTTAGGCATTTTGTGAACTGTGGATTACCGC
ATCAGTATTTAACTTTGGTGATTCTTTCCTTAATTCAATGATTGATATTT
GAATTATTGATTTCTTAAATTAATTATAGATTACTGGTTCCTTGTTGTTA
TCTGATTTAGTTTAATTTAGCACAACCATGTATGCATCTGATGTTTGTTT
GCTTGTCACTGGCAGAGGGTTGGTGGATGCTGGGATGGTTACTGGTTGAC
AGAATCTCTGCTTCACGACACTGATACATTTGCTGGTGGATTAGCTTATT
AAGAATCGTCTAATGCAGGAATCAGGTTCACGAGATTACTGTCAAAAGCA
TGAAATGATCTGCAATCACCATCCTAATCTGTAAAATTTGATTATTGTAT
GGCATCAATAGAAATTACATCACGGCACACCATGTACTTACAAAATTTGT
TCTTAGATATTAAAATTCTATACTTTGCAATTGCTTGCCCAAAGACGCAA
ACAACTGCGTAATGAGGCGTAGTCTTTTTTATCGTGCTACTAGCAATTCA
GAAACTACATCCTCTGCTGTTTGGTTGTGTGAAGACGGGTCAAAGATGGC
CTGATTAACCAACAAGAAACCAAACAAATGCAACTAACTAAAACGACACG
ATTCAAATTTATCACTTCTCTAAAATACAACCAAAATAGCATATTTCACT
TTCTTGAATATGACATTTTGGTTTTAAATTTTAATTAAAATTTAAAATCA
TCATCTATCTAAATTTAAATTAAGAAAGGCTCATGGCCAAAATATGATCA
AGATTTTAAGATGCCATAAGCTAAGAAGGAAGTGCATGGAAAATATCTGA
ACACAAACAAAACAGCGATATTTCCATAAGATAGAAGCCTTTATAACAAT
TCAGTTGTAAATGGTGCAGACTAAAGTTGCAGTGAAGGCCATTCATTATT
AAATTCTGCATTTTACATGAGTAGAAGAAGGGTAAACAGGGATGACCTTA
ATTACTGCAAGTGCAAAAAACCATGAGGGCCATTGTAGTTCCCTAAACCA
AAGACATCAGTGACAAGAATCTTGAAAAATAGAGAGGAGTTTTAAGCATG
TGGCAGTGCACAACCACTTCCAATTATTCGTATGCTAACCACACACGGAT
ATTATATATAAATCAATTCTAACATATCCATATGGTCATGCAGGTATTGG
CCCAGATGAAGGTCACACTCGCTGGCACTTGGTAGTATCATAACAAAAAA
ATCCCAGTTGTGATTACTAATTTGTTGAATACTTGGAACTAATAATGACC
TCAAAAGGGAGTTGAGAAGGGCACAATCTCTACCTAAAGGGTGTAAGTAT
ATAAAATTATGAGACAGGAGGAGAAAAGAGCATGCAAATCGACAAATATA
TGTATCATGAAAAGGCTAACCAGCAAGAACCAGAAGAAGTGGAAGAGAGA
TGGAGGGAAAGCCTTGAGGTTACTAAAATTACCAAAAAAGAAAATGAACA
GATGTTTGAACGACCTGGGAATGGAATTTTGAAATCTGCAGCAGCTGGAC
CCGTATTTACAATCATATCTATTTATATTTTTTGTTAATGGCTTTAAGGT
AAAGG
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Coding sequence (CDS) from alignment at chr05:18157346..18160150-

>rna-XM_014644850.2_VrVC1973A-SNU_v1 ID=rna-XM_014644850.2_VrVC1973A-SNU_v1; Name=rna-XM_014644850.2; organism=Vigna radiata; type=CDS; length=579bp; location=Sequence derived from: chr05:18157346..18160150- (Vigna radiata
ATGTCGTTTGGATCCTCTCTCTTGTCGCATCCGCATTCCGTTCGATTCTT
GTTCAACAACACCGGAAACTCTCGCTTCAAAGCCGCTGCCGAAGTTCCCG
ATTCCCTCTCCGAGGATTGGTTCAAATCTCGCAAGAAAAGGCCCTTTGGT
CCACGATTAGATTTTAGTGCAGAAGATGCGGTGCATTACCAGCTCGAAGC
CTTGAAGTATAACGATCAACCTCGTCAAGACTATGGAATCGAGGTTATGT
ACAGGTTCGCCGGATTTGATCCTTTTGAAAGGTCTACCTATTTTGGGCCT
TTCTTTGATTTGGGCCAGTTTGAAAGGTTTAGGCGTATTTTTCACCACTC
TACTTATCGAGTATTGCTAGGTCACAAGGAGAGAAAGATCATGAGCACTT
TGTTTGTCGAGGAGAACAAATACAAGCAGCGGGTTTGGATTCGTGGGAGT
CGACCGGAGGAAGAAGAGATATTTCAATTTACAATGGTTCAGAGGGTTGG
TGGATGCTGGGATGGTTACTGGTTGACAGAATCTCTGCTTCACGACACTG
ATACATTTGCTGGTGGATTAGCTTATTAA
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