rna-XM_014645000.2
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Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_014645000.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q3E958|SHN3_ARATH (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 3.255e-74 Identity = 117/197 (59.39%), Postives = 137/197 (69.54%), Query Frame = 0
Query: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTPSAASSADHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTKTESAWSSGSSVNDTAGNNGGVVVEEEEEEEEEDRLALQMIEELLNW 197
MV +KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTF+TAE AARAYDQAA+LMNGQ+AKTNFP + ++S + ++A SPK+LSELL+ KLRK CKD P LTCLRLD D+SHIGVWQK AG + NWV VELG K D N V E+ +E+D++A+QMIEELLNW
Sbjct: 1 MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFP--------VIKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAGSKTSPNWVKLVELGDKVNARPGG--------DIETNKMKV---RNEDVQEDDQMAMQMIEELLNW 178
BLAST of rna-XM_014645000.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LFN7|SHN2_ARATH (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 3.722e-67 Identity = 127/201 (63.18%), Postives = 147/201 (73.13%), Query Frame = 0
Query: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTPSAASSADHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTKTESAWSSGSSVNDTAGNNGGVVVEEEEEE---EEEDRLALQMIEELLNWN 198
MV ++KFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAA+LMNGQNAKTNFP +++ + D ++ +SPK+LSELL+ KLRK CKD PSLTCLRLD D+SHIGVWQK AG + WVMR+ELG ESA G T N V EEEEEE +ED+LA++MIEELLNW+
Sbjct: 1 MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPVVKSEEGSDHV------KDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKRAGSKTSPTWVMRLELG--NVVNESAVDLGL----TTMNKQNVEKEEEEEEAIISDEDQLAMEMIEELLNWS 189
BLAST of rna-XM_014645000.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9XI33|WIN1_ARATH (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 8.788e-66 Identity = 113/199 (56.78%), Postives = 138/199 (69.35%), Query Frame = 0
Query: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTT-PSAASSADHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTKTESAWSSGSSVNDTAGNNGGVVVEEEEEEEEEDRLALQMIEELLNWN 198
MVQ KKFRGVRQR WGSWV+EIRHPLLKRR+WLGTFETAE AARAYD+AA+LM+G+NAKTNFP N T+ + S++ ++ S +LS +LS KLRK CK P+PSLTCLRLD +SHIGVWQK AG S S+WVM VELG + E+ + + EE +EE+++ALQMIEELLN N
Sbjct: 1 MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGGSREEVLDEEEKVALQMIEELLNTN 199
BLAST of rna-XM_014645000.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q94AW5|ERF03_ARATH (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 7.752e-30 Identity = 59/99 (59.60%), Postives = 67/99 (67.68%), Query Frame = 0
Query: 5 KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTPSAASSADHDNAFLSPKALSELLSTKLRK 103
++FRGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G A+TNFP N P+A T S+ K LS L+ KL K
Sbjct: 6 QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYN---PNAIPTSSS-------------KLLSATLTAKLHK 88
BLAST of rna-XM_014645000.2 vs. UniProtKB/Swiss-Prot
Match: sp|P16146|PZ02_LUPPO (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 4.858e-24 Identity = 42/61 (68.85%), Postives = 50/61 (81.97%), Query Frame = 0
Query: 5 KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKN 65
+++RG RQR WGSWVSEIRH +LK R+W GTFE+AE AARAYD+AA LM G A+TNFP N
Sbjct: 6 QRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRARTNFPYN 66
BLAST of rna-XM_014645000.2 vs. UniProtKB/Swiss-Prot
Match: sp|O22259|ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana OX=3702 GN=ERF071 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.163e-21 Identity = 40/69 (57.97%), Postives = 49/69 (71.01%), Query Frame = 0
Query: 7 FRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTP 75
+RG+RQR WG W +EIR P RVWLGTF+TA+ AARAYD AAI + G+ AK NFP Q + +A T P
Sbjct: 50 YRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFPNTQVEEEADTKP 118
BLAST of rna-XM_014645000.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LYU3|EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 GN=ERF113 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.416e-20 Identity = 43/74 (58.11%), Postives = 49/74 (66.22%), Query Frame = 0
Query: 5 KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTPSAA 78
+ +RGVRQR WG W +EIR P RVWLGTFETAE AA AYD+AA+ G AK NFP+ P TTT S A
Sbjct: 37 RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGPTTTTTISHA 110
BLAST of rna-XM_014645000.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FK12|CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana OX=3702 GN=CRF3 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 4.569e-20 Identity = 40/60 (66.67%), Postives = 45/60 (75.00%), Query Frame = 0
Query: 3 QAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNF 62
Q KKFRGVRQR WG W +EIR P +RR+WLGTFETAE AA YD AAI + G +A TNF
Sbjct: 121 QIKKFRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNF 180
BLAST of rna-XM_014645000.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LU18|ERF36_ARATH (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 GN=ERF036 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 7.954e-20 Identity = 43/83 (51.81%), Postives = 54/83 (65.06%), Query Frame = 0
Query: 2 VQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTPSAASSADHD 84
+Q +RGVR R WG WVSEIR P K R+WLGTF TA+ AARA+D AA+ + G +A NFP+ A+ P ASS+ HD
Sbjct: 56 MQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPEL-----ASLFPRPASSSPHD 133
BLAST of rna-XM_014645000.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SIE4|ERF56_ARATH (Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana OX=3702 GN=ERF056 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.812e-20 Identity = 42/74 (56.76%), Postives = 49/74 (66.22%), Query Frame = 0
Query: 7 FRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTPSAASS 80
+RGVRQR WG WV+EIR P + R+WLGTFETAE AA AYDQAA + G AK NFP N D PS+ +
Sbjct: 71 YRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEKAALAYDQAAFQLRGDIAKLNFP-NLIHEDMNPLPSSVDT 143
BLAST of rna-XM_014645000.2 vs. Araport11
Match: AT5G25390.2 (| Integrase-type DNA-binding superfamily protein | Chr5:8820637-8821741 FORWARD LENGTH=189 | 201606) HSP 1 Score: 224.942 bits (572), Expect = 3.330e-75 Identity = 117/197 (59.39%), Postives = 137/197 (69.54%), Query Frame = 0
Query: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTPSAASSADHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTKTESAWSSGSSVNDTAGNNGGVVVEEEEEEEEEDRLALQMIEELLNW 197
MV +KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTF+TAE AARAYDQAA+LMNGQ+AKTNFP + ++S + ++A SPK+LSELL+ KLRK CKD P LTCLRLD D+SHIGVWQK AG + NWV VELG K D N V E+ +E+D++A+QMIEELLNW
Sbjct: 1 MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFP--------VIKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAGSKTSPNWVKLVELGDKVNARPGG--------DIETNKMKV---RNEDVQEDDQMAMQMIEELLNW 178
BLAST of rna-XM_014645000.2 vs. Araport11
Match: AT5G25390.1 (| Integrase-type DNA-binding superfamily protein | Chr5:8820637-8821741 FORWARD LENGTH=186 | 201606) HSP 1 Score: 213.386 bits (542), Expect = 9.254e-71 Identity = 114/197 (57.87%), Postives = 134/197 (68.02%), Query Frame = 0
Query: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTPSAASSADHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTKTESAWSSGSSVNDTAGNNGGVVVEEEEEEEEEDRLALQMIEELLNW 197
MV +KKFRGVRQRQWGSWVSEIRHPLL VWLGTF+TAE AARAYDQAA+LMNGQ+AKTNFP + ++S + ++A SPK+LSELL+ KLRK CKD P LTCLRLD D+SHIGVWQK AG + NWV VELG K D N V E+ +E+D++A+QMIEELLNW
Sbjct: 1 MVHSKKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLMNGQSAKTNFP--------VIKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAGSKTSPNWVKLVELGDKVNARPGG--------DIETNKMKV---RNEDVQEDDQMAMQMIEELLNW 175
BLAST of rna-XM_014645000.2 vs. Araport11
Match: AT5G11190.1 (| Integrase-type DNA-binding superfamily protein | Chr5:3564976-3566051 FORWARD LENGTH=189 | 201606) HSP 1 Score: 206.838 bits (525), Expect = 3.808e-68 Identity = 127/201 (63.18%), Postives = 147/201 (73.13%), Query Frame = 0
Query: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTPSAASSADHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTKTESAWSSGSSVNDTAGNNGGVVVEEEEEE---EEEDRLALQMIEELLNWN 198
MV ++KFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAA+LMNGQNAKTNFP +++ + D ++ +SPK+LSELL+ KLRK CKD PSLTCLRLD D+SHIGVWQK AG + WVMR+ELG ESA G T N V EEEEEE +ED+LA++MIEELLNW+
Sbjct: 1 MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPVVKSEEGSDHV------KDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKRAGSKTSPTWVMRLELG--NVVNESAVDLGL----TTMNKQNVEKEEEEEEAIISDEDQLAMEMIEELLNWS 189
BLAST of rna-XM_014645000.2 vs. Araport11
Match: AT1G15360.2 (| Integrase-type DNA-binding superfamily protein | Chr1:5283609-5284506 FORWARD LENGTH=199 | 201606) HSP 1 Score: 203.756 bits (517), Expect = 8.991e-67 Identity = 113/199 (56.78%), Postives = 138/199 (69.35%), Query Frame = 0
Query: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTT-PSAASSADHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTKTESAWSSGSSVNDTAGNNGGVVVEEEEEEEEEDRLALQMIEELLNWN 198
MVQ KKFRGVRQR WGSWV+EIRHPLLKRR+WLGTFETAE AARAYD+AA+LM+G+NAKTNFP N T+ + S++ ++ S +LS +LS KLRK CK P+PSLTCLRLD +SHIGVWQK AG S S+WVM VELG + E+ + + EE +EE+++ALQMIEELLN N
Sbjct: 1 MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGGSREEVLDEEEKVALQMIEELLNTN 199
BLAST of rna-XM_014645000.2 vs. Araport11
Match: AT1G15360.1 (| Integrase-type DNA-binding superfamily protein | Chr1:5283609-5284506 FORWARD LENGTH=199 | 201606) HSP 1 Score: 203.756 bits (517), Expect = 8.991e-67 Identity = 113/199 (56.78%), Postives = 138/199 (69.35%), Query Frame = 0
Query: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTT-PSAASSADHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTKTESAWSSGSSVNDTAGNNGGVVVEEEEEEEEEDRLALQMIEELLNWN 198
MVQ KKFRGVRQR WGSWV+EIRHPLLKRR+WLGTFETAE AARAYD+AA+LM+G+NAKTNFP N T+ + S++ ++ S +LS +LS KLRK CK P+PSLTCLRLD +SHIGVWQK AG S S+WVM VELG + E+ + + EE +EE+++ALQMIEELLN N
Sbjct: 1 MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGGSREEVLDEEEKVALQMIEELLNTN 199
BLAST of rna-XM_014645000.2 vs. Araport11
Match: AT5G25190.1 (| Integrase-type DNA-binding superfamily protein | Chr5:8707007-8707655 REVERSE LENGTH=181 | 201606) HSP 1 Score: 111.694 bits (278), Expect = 7.931e-31 Identity = 59/99 (59.60%), Postives = 67/99 (67.68%), Query Frame = 0
Query: 5 KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTPSAASSADHDNAFLSPKALSELLSTKLRK 103
++FRGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G A+TNFP N P+A T S+ K LS L+ KL K
Sbjct: 6 QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYN---PNAIPTSSS-------------KLLSATLTAKLHK 88
BLAST of rna-XM_014645000.2 vs. Araport11
Match: AT2G47520.1 (| Integrase-type DNA-binding superfamily protein | Chr2:19502891-19503490 REVERSE LENGTH=171 | 201606) HSP 1 Score: 89.3521 bits (220), Expect = 2.213e-22 Identity = 40/69 (57.97%), Postives = 49/69 (71.01%), Query Frame = 0
Query: 7 FRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTP 75
+RG+RQR WG W +EIR P RVWLGTF+TA+ AARAYD AAI + G+ AK NFP Q + +A T P
Sbjct: 50 YRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFPNTQVEEEADTKP 118
BLAST of rna-XM_014645000.2 vs. Araport11
Match: AT5G13330.1 (| related to AP2 6l | Chr5:4272384-4274461 FORWARD LENGTH=212 | 201606) HSP 1 Score: 87.4261 bits (215), Expect = 3.494e-21 Identity = 43/74 (58.11%), Postives = 49/74 (66.22%), Query Frame = 0
Query: 5 KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTPSAA 78
+ +RGVRQR WG W +EIR P RVWLGTFETAE AA AYD+AA+ G AK NFP+ P TTT S A
Sbjct: 37 RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGPTTTTTISHA 110
BLAST of rna-XM_014645000.2 vs. Araport11
Match: AT5G53290.1 (| cytokinin response factor 3 | Chr5:21617961-21619025 REVERSE LENGTH=354 | 201606) HSP 1 Score: 89.3521 bits (220), Expect = 4.675e-21 Identity = 40/60 (66.67%), Postives = 45/60 (75.00%), Query Frame = 0
Query: 3 QAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNF 62
Q KKFRGVRQR WG W +EIR P +RR+WLGTFETAE AA YD AAI + G +A TNF
Sbjct: 121 QIKKFRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNF 180
BLAST of rna-XM_014645000.2 vs. Araport11
Match: AT3G16280.1 (| Integrase-type DNA-binding superfamily protein | Chr3:5518355-5519065 FORWARD LENGTH=236 | 201606) HSP 1 Score: 86.6557 bits (213), Expect = 8.138e-21 Identity = 43/83 (51.81%), Postives = 54/83 (65.06%), Query Frame = 0
Query: 2 VQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTPSAASSADHD 84
+Q +RGVR R WG WVSEIR P K R+WLGTF TA+ AARA+D AA+ + G +A NFP+ A+ P ASS+ HD
Sbjct: 56 MQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPEL-----ASLFPRPASSSPHD 133
BLAST of rna-XM_014645000.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3U3A1|A0A1S3U3A1_VIGRR (ethylene-responsive transcription factor SHINE 2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106761449 PE=4 SV=1) HSP 1 Score: 410.609 bits (1054), Expect = 5.947e-145 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
Query: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTPSAASSADHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTKTESAWSSGSSVNDTAGNNGGVVVEEEEEEEEEDRLALQMIEELLNWN 198
MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTPSAASSADHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTKTESAWSSGSSVNDTAGNNGGVVVEEEEEEEEEDRLALQMIEELLNWN
Sbjct: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTPSAASSADHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTKTESAWSSGSSVNDTAGNNGGVVVEEEEEEEEEDRLALQMIEELLNWN 198
BLAST of rna-XM_014645000.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RCM9|A0A0S3RCM9_PHAAN (AP2/ERF domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G081200 PE=4 SV=1) HSP 1 Score: 301.597 bits (771), Expect = 7.786e-102 Identity = 179/202 (88.61%), Postives = 187/202 (92.57%), Query Frame = 0
Query: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTPSAASSA----DHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTKTESAWSSGSSVNDTAGNNGGVVVEEEEEEEEEDRLALQMIEELLNWN 198
MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATT+ + ++++ DHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQT++ESAWS SS NDTAGNNG V EEEEEEDRLALQMIEELLNWN
Sbjct: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTSTTPSAASASASDHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTQSESAWSPSSSANDTAGNNG---VVVVEEEEEEDRLALQMIEELLNWN 199
BLAST of rna-XM_014645000.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UHF3|A0A0L9UHF3_PHAAN (AP2/ERF domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan04g218500 PE=4 SV=1) HSP 1 Score: 301.597 bits (771), Expect = 7.786e-102 Identity = 179/202 (88.61%), Postives = 187/202 (92.57%), Query Frame = 0
Query: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTPSAASSA----DHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTKTESAWSSGSSVNDTAGNNGGVVVEEEEEEEEEDRLALQMIEELLNWN 198
MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATT+ + ++++ DHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQT++ESAWS SS NDTAGNNG V EEEEEEDRLALQMIEELLNWN
Sbjct: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTSTTPSAASASASDHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTQSESAWSPSSSANDTAGNNG---VVVVEEEEEEDRLALQMIEELLNWN 199
BLAST of rna-XM_014645000.2 vs. UniProtKB/TrEMBL
Match: tr|V7AWM1|V7AWM1_PHAVU (AP2/ERF domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G093600g PE=4 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 3.755e-100 Identity = 171/198 (86.36%), Postives = 181/198 (91.41%), Query Frame = 0
Query: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTPSAASSADHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTKTESAWSSGSSVNDTAGNNGGVVVEEEEEEEEEDRLALQMIEELLNWN 198
MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFP ++ Q +A + + +++ HDN FLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKK T+ ESAWS SS NDTAGN+G VVVEE EEEEEEDRLALQMIEELLNWN
Sbjct: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPTSKNQAEADAS-ATTAASRHDNTFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKHTEGESAWSPNSSTNDTAGNSGVVVVEEGEEEEEEDRLALQMIEELLNWN 197
BLAST of rna-XM_014645000.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6NQY8|A0A4D6NQY8_VIGUN (EREBP-like factor OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g3256 PE=4 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 6.853e-96 Identity = 173/202 (85.64%), Postives = 180/202 (89.11%), Query Frame = 0
Query: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFP--KNQAQPDATTTPSAASSADH--DNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTKTESAWSSGSSVNDTAGNNGGVVVEEEEEEEEEDRLALQMIEELLNWN 198
MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFP KN QPD+ +AA+S+ DNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGS+WVMRVELGKKQT+ ESAWS S N TA N+ VVVEEEEEEEEED LALQMIEELLNWN
Sbjct: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPTSKNHPQPDSAAAAAAATSSAAASDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSSWVMRVELGKKQTQGESAWSPNSGANHTAANS-EVVVEEEEEEEEEDTLALQMIEELLNWN 201
BLAST of rna-XM_014645000.2 vs. UniProtKB/TrEMBL
Match: tr|A0A151RLN1|A0A151RLN1_CAJCA (Ethylene-responsive transcription factor SHINE 3 OS=Cajanus cajan OX=3821 GN=KK1_035135 PE=4 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 5.117e-94 Identity = 155/200 (77.50%), Postives = 164/200 (82.00%), Query Frame = 0
Query: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTPSAASSADHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTKTESAWSSGSSVND--TAGNNGGVVVEEEEEEEEEDRLALQMIEELLNWN 198
MVQ+KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFP ++ QP+ DHD+ FLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELG KQTK SG SV+ + G + G E EEEDR+ALQMIEELLNWN
Sbjct: 1 MVQSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPTSKNQPEE----------DHDDTFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGNKQTK-----GSGESVDSPLSCGTDHGA---GNEVVEEEDRIALQMIEELLNWN 182
BLAST of rna-XM_014645000.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445K5Q4|A0A445K5Q4_GLYSO (Ethylene-responsive transcription factor SHINE 3 OS=Glycine soja OX=3848 GN=D0Y65_013959 PE=4 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 2.708e-92 Identity = 153/200 (76.50%), Postives = 162/200 (81.00%), Query Frame = 0
Query: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFP--KNQAQPDATTTPSAASSADHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTKTESAWSSGSSVNDTAGNNGGVVVEEEEEEEEEDRLALQMIEELLNWN 198
MVQ KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFP KNQA+ D ++ + FLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMR+ELGKKQ E + S+ S + T G E E EEEDR+ALQMIEELLNWN
Sbjct: 1 MVQTKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPTSKNQAEAD---------DNNNTDTFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRLELGKKQITEEGSESTESPQSSTNG------ATENNEVEEEDRVALQMIEELLNWN 185
BLAST of rna-XM_014645000.2 vs. UniProtKB/TrEMBL
Match: tr|I1K8V5|I1K8V5_SOYBN (AP2/ERF domain-containing protein OS=Glycine max OX=3847 GN=100794649 PE=4 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 2.708e-92 Identity = 153/200 (76.50%), Postives = 162/200 (81.00%), Query Frame = 0
Query: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFP--KNQAQPDATTTPSAASSADHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTKTESAWSSGSSVNDTAGNNGGVVVEEEEEEEEEDRLALQMIEELLNWN 198
MVQ KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFP KNQA+ D ++ + FLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMR+ELGKKQ E + S+ S + T G E E EEEDR+ALQMIEELLNWN
Sbjct: 1 MVQTKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPTSKNQAEAD---------DNNNTDTFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRLELGKKQITEEGSESTESPQSSTNG------ATENNEVEEEDRVALQMIEELLNWN 185
BLAST of rna-XM_014645000.2 vs. UniProtKB/TrEMBL
Match: tr|I3T2U9|I3T2U9_LOTJA (AP2/ERF domain-containing protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 7.340e-90 Identity = 149/198 (75.25%), Postives = 162/198 (81.82%), Query Frame = 0
Query: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNQAQPDATTTPSAASSADHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTKTESAWSSGSSVNDTAGNNGGVVVEEEEEEEEEDRLALQMIEELLNWN 198
MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAY+QAAILMNGQNAKTNFP ++ Q AA+S D++FLSPKALSELLSTKLRKYCKDP+PS+TCLRLDADNSHIGVWQKGAGPHS SNWVMRVELGKKQ + G SV + G+ V + EEEDR+ALQMIEELLNWN
Sbjct: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYNQAAILMNGQNAKTNFPNSRNQAG-----DAATSNCDDDSFLSPKALSELLSTKLRKYCKDPSPSVTCLRLDADNSHIGVWQKGAGPHSNSNWVMRVELGKKQNE-------GHSV--STGSPQHVCSNAAKRVEEEDRVALQMIEELLNWN 184
BLAST of rna-XM_014645000.2 vs. UniProtKB/TrEMBL
Match: tr|I1JUD1|I1JUD1_SOYBN (AP2/ERF domain-containing protein OS=Glycine max OX=3847 GN=100806821 PE=4 SV=2) HSP 1 Score: 270.781 bits (691), Expect = 9.903e-90 Identity = 163/203 (80.30%), Postives = 169/203 (83.25%), Query Frame = 0
Query: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFP--KNQAQPDATTTPSAASSADHDNAFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQTKTESAWSSGSSVNDTAG---NNGGVVVEEEEEEEEEDRLALQMIEELLNWN 198
MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFP KNQA+ D D++N FLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQ TE S+GS + G NN V E EEEEEEDR+ALQMIEELLNWN
Sbjct: 1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPTSKNQAEADH----------DNNNTFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQIITEGE-STGSPQSTNIGAVENNEVEVEVEVEEEEEEDRVALQMIEELLNWN 192 The following BLAST results are available for this feature:
BLAST of rna-XM_014645000.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot) Total hits: 10
BLAST of rna-XM_014645000.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11) Total hits: 10
BLAST of rna-XM_014645000.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_014645000.2_VrVC1973A-SNU_v1 ID=rna-XM_014645000.2_VrVC1973A-SNU_v1; Name=rna-XM_014645000.2; organism=Vigna radiata; type=mRNA; length=597bpback to top protein sequence of rna-XM_014645000.2_VrVC1973A-SNU_v1 >rna-XM_014645000.2_VrVC1973A-SNU_v1 ID=rna-XM_014645000.2_VrVC1973A-SNU_v1; Name=rna-XM_014645000.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=198bpback to top mRNA from alignment at chr05:18424088..18425192- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_014645000.2_VrVC1973A-SNU_v1 ID=rna-XM_014645000.2_VrVC1973A-SNU_v1; Name=rna-XM_014645000.2; organism=Vigna radiata; type=mRNA; length=1105bp; location=Sequence derived from: chr05:18424088..18425192- (Vigna radiataback to top Coding sequence (CDS) from alignment at chr05:18424088..18425192- >rna-XM_014645000.2_VrVC1973A-SNU_v1 ID=rna-XM_014645000.2_VrVC1973A-SNU_v1; Name=rna-XM_014645000.2; organism=Vigna radiata; type=CDS; length=597bp; location=Sequence derived from: chr05:18424088..18425192- (Vigna radiataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|