rna-XM_014645265.2

Transcript Overview
Namerna-XM_014645265.2
Unique Namerna-XM_014645265.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length483
Productlachrymatory-factor synthase
References
External references for this mRNA
DatabaseAccession
GeneID106761695
GenbankXM_014645265.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr05chromosomechr05:16535522..16538877 +Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL240Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0313Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0361Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvrvL489Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvrvL564Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0709Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0941Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivrvL497Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL309Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL409Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL647Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvrvL0454Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL345Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvrvL470Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccvrvL1113Cajanus cajan Asha genome v1.0Cajanus cajan
pvvrvL118Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL404Pisum sativum Cameor genome v1aPisum sativum
psvrvL412Pisum sativum Cameor genome v1aPisum sativum
pvvrvL426Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvrvL743Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL170Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL262Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL497Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvrvL017Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvrvL084Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvrvR162Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvrvR192Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvL276Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL507Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR468Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR513Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvzwsR375Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR303Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR385Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR332Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR338Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR404Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR364Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuR368Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuR373Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR372Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR398Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvrvL283Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL385Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL605Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL031Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL441Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL521Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL282Cicer arietinum
carvrvL397Cicer arietinum
ccavrvL167Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL319Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL451Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL650Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL721Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR361Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR370Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR384Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR394Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR444Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR446Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR457Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR518Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR357Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR372Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR383Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR431Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR438Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL062Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL175Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL221Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL527Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL108Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL213Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL380Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL692Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR313Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR342Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR347Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR375Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigst.11G137900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Psat05G0069100-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun04g008900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-KK1_035621Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Hedin2.R1.2g195120.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.009G111000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Tiffany.R1.2g158000.1Vicia faba cv. Tiffany genome v1.0Vicia faba
PvulFLAVERTChr09.1000705Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigst.02G079200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
evm.model.Chr09.1784Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
LR48_mrnaVigan10g009200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigan.11G251300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vfaba.Tiffany.R1.1g119280.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Ca_14711.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_01922Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Phvul.004G170100.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun09g190900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
jg55673.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
XM_058926836.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigan.02G102300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Va04G060470.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat5g020520.1Pisum sativum Cameor genome v1aPisum sativum
Vigun04g008900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
LR48_mrnaVigan04g207100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigun09g190900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Psat5g021320.1Pisum sativum Cameor genome v1aPisum sativum
rna-XM_004501084.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vum_02G00845.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Cr_12030.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Cc_v2.0_17524.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
PvulFLAVERTChr04.1001099Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cc_v2.0_06779.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vum_11G01671.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Cc_v2.0_11318.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Va10G001160.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_28500Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr04.75Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_014653671.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106761695gene-LOC106761695_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014645265.2-1exon-XM_014645265.2-1_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014645265.2-2exon-XM_014645265.2-2_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014500751.1cds-XP_014500751.1_VrVC1973A-SNU_v1Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014645265.2_VrVC1973A-SNU_v1rna-XM_014645265.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014645265.2_VrVC1973A-SNU_v1rna-XM_014645265.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
BLAST of rna-XM_014645265.2 vs. UniProtKB/Swiss-Prot
Match: sp|P59082|LFS_ALLCE (Lachrymatory-factor synthase OS=Allium cepa OX=4679 GN=LFS PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.517e-15
Identity = 45/127 (35.43%), Postives = 67/127 (52.76%), Query Frame = 0
Query:    8 RWKGKAVVELADTNGEVAWSVIEDFCNIHKWM-SLDTCYQQEGSLGKPGLIRYCASTIVDDVEKTPTLKWVKEKLLAIDPVERCLSYEVIENNMGFKFYVATLKVL-SREEGGCKIEWGFVCDPMEG 132
            +W GK    L +T  E AW++++DF N+HK M SL  C   EG     G +RY    I+  +E+     W KEKL+A+D      SY   E   G++ Y AT++++   E  G + +W F C  +EG
Sbjct:   20 KWSGKVHALLPNTKPEQAWTLLKDFINLHKVMPSLSVCELVEGEANVVGCVRYVKG-IMHPIEEE---FWAKEKLVALDNKNMSYSYIFTECFTGYEDYTATMQIVEGPEHKGSRFDWSFQCKYIEG 142          
BLAST of rna-XM_014645265.2 vs. Araport11
Match: AT4G32870.1 (| Polyketide cyclase/dehydrase and lipid transport superfamily protein | Chr4:15862168-15862641 FORWARD LENGTH=157 | 201606)

HSP 1 Score: 147.902 bits (372), Expect = 6.358e-46
Identity = 72/151 (47.68%), Postives = 102/151 (67.55%), Query Frame = 0
Query:    8 RWKGKAVVELADTNGEVAWSVIEDFCNIHKWM-SLDTCYQQEGSLGKPGLIRYCASTIVDDVEKTPTLKWVKEKLLAIDPVERCLSYEVIENNMGFKFYVATLKV--LSREEGGCKIEWGFVCDPMEGWSVEGLESYVESSLQIIKKNIQL 155
            +W+GK V ++     E  WSV  DFCN+ +W  S+DTCY+ +G+ G PGLIRYC++T      K    +W KEKL+ IDP+ RCLSYE++ENN+GF+ YVAT++V  +  E+   +IEW FV DP++GW  E LESYV+  LQ +   ++L
Sbjct:    9 KWEGKKVAQVNGVTAEKVWSVFSDFCNVQEWFPSVDTCYRVQGTDGVPGLIRYCSTTKT----KEEGSRWAKEKLVKIDPIGRCLSYEILENNVGFRSYVATVQVTPVDGEDQVSRIEWSFVADPVDGWKKEDLESYVDFCLQHMANKMEL 155          
BLAST of rna-XM_014645265.2 vs. Araport11
Match: AT2G25770.2 (| Polyketide cyclase/dehydrase and lipid transport superfamily protein | Chr2:10992987-10993490 FORWARD LENGTH=167 | 201606)

HSP 1 Score: 132.494 bits (332), Expect = 9.343e-40
Identity = 63/151 (41.72%), Postives = 93/151 (61.59%), Query Frame = 0
Query:    5 SDERWKGKAVVELADTNGEVAWSVIEDFCNIHKWM-SLDTCYQQEGSLGKPGLIRYCASTIVDDVEKTPTLKWVKEKLLAIDPVERCLSYEVIENNMGFKFYVATLKVLSREEGGCKIEWGFVCDPMEGWSVEGLESYVESSLQIIKKNIQ 154
            S E+W  K  V L     +  W +  DF N+HKW+ +L TC+   G+ G+ G IR+C+   +         +W KEKL+A++PVER + YE++E+N GF+ YV+T+K+L R E GC IEW F  DP+ G S+E L    E +L+II KN++
Sbjct:    6 SPEKWLAKVSVTLTKAKPDEIWPLFTDFFNLHKWLPTLATCHGVHGNNGEQGCIRFCSGFSIGSNGVDSAARWSKEKLVAVNPVERVMRYEIVESNTGFESYVSTVKILPRGEDGCVIEWSFTVDPVRGLSLENLVKKYEKALEIITKNME 156          
BLAST of rna-XM_014645265.2 vs. Araport11
Match: AT2G25770.1 (| Polyketide cyclase/dehydrase and lipid transport superfamily protein | Chr2:10992987-10993490 FORWARD LENGTH=167 | 201606)

HSP 1 Score: 132.494 bits (332), Expect = 9.343e-40
Identity = 63/151 (41.72%), Postives = 93/151 (61.59%), Query Frame = 0
Query:    5 SDERWKGKAVVELADTNGEVAWSVIEDFCNIHKWM-SLDTCYQQEGSLGKPGLIRYCASTIVDDVEKTPTLKWVKEKLLAIDPVERCLSYEVIENNMGFKFYVATLKVLSREEGGCKIEWGFVCDPMEGWSVEGLESYVESSLQIIKKNIQ 154
            S E+W  K  V L     +  W +  DF N+HKW+ +L TC+   G+ G+ G IR+C+   +         +W KEKL+A++PVER + YE++E+N GF+ YV+T+K+L R E GC IEW F  DP+ G S+E L    E +L+II KN++
Sbjct:    6 SPEKWLAKVSVTLTKAKPDEIWPLFTDFFNLHKWLPTLATCHGVHGNNGEQGCIRFCSGFSIGSNGVDSAARWSKEKLVAVNPVERVMRYEIVESNTGFESYVSTVKILPRGEDGCVIEWSFTVDPVRGLSLENLVKKYEKALEIITKNME 156          
BLAST of rna-XM_014645265.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3U422|A0A1S3U422_VIGRR (lachrymatory-factor synthase OS=Vigna radiata var. radiata OX=3916 GN=LOC106761695 PE=3 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 6.030e-114
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
Query:    1 MGEKSDERWKGKAVVELADTNGEVAWSVIEDFCNIHKWMSLDTCYQQEGSLGKPGLIRYCASTIVDDVEKTPTLKWVKEKLLAIDPVERCLSYEVIENNMGFKFYVATLKVLSREEGGCKIEWGFVCDPMEGWSVEGLESYVESSLQIIKKNIQLAYNTP 160
            MGEKSDERWKGKAVVELADTNGEVAWSVIEDFCNIHKWMSLDTCYQQEGSLGKPGLIRYCASTIVDDVEKTPTLKWVKEKLLAIDPVERCLSYEVIENNMGFKFYVATLKVLSREEGGCKIEWGFVCDPMEGWSVEGLESYVESSLQIIKKNIQLAYNTP
Sbjct:    1 MGEKSDERWKGKAVVELADTNGEVAWSVIEDFCNIHKWMSLDTCYQQEGSLGKPGLIRYCASTIVDDVEKTPTLKWVKEKLLAIDPVERCLSYEVIENNMGFKFYVATLKVLSREEGGCKIEWGFVCDPMEGWSVEGLESYVESSLQIIKKNIQLAYNTP 160          
BLAST of rna-XM_014645265.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RCD1|A0A0S3RCD1_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G102600 PE=3 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 5.190e-107
Identity = 150/160 (93.75%), Postives = 156/160 (97.50%), Query Frame = 0
Query:    1 MGEKSDERWKGKAVVELADTNGEVAWSVIEDFCNIHKWMSLDTCYQQEGSLGKPGLIRYCASTIVDDVEKTPTLKWVKEKLLAIDPVERCLSYEVIENNMGFKFYVATLKVLSREEGGCKIEWGFVCDPMEGWSVEGLESYVESSLQIIKKNIQLAYNTP 160
            MGEKSDERWKGKAVVELADTN EVAWSVIEDFCNIHKWMSLDT YQQEG+LGKPGLIRYCASTIVD+V+KTPTLKW KEK+LAIDPVER LSYEVIENNMGFKFYVATLKVLSREEGGCKIEWGFVCDP+EGW+VEGLESYVESSLQIIKKNIQLAYNTP
Sbjct:    1 MGEKSDERWKGKAVVELADTNTEVAWSVIEDFCNIHKWMSLDTSYQQEGTLGKPGLIRYCASTIVDEVKKTPTLKWAKEKVLAIDPVERSLSYEVIENNMGFKFYVATLKVLSREEGGCKIEWGFVCDPVEGWTVEGLESYVESSLQIIKKNIQLAYNTP 160          
BLAST of rna-XM_014645265.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UGJ5|A0A0L9UGJ5_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan04g207100 PE=3 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 5.190e-107
Identity = 150/160 (93.75%), Postives = 156/160 (97.50%), Query Frame = 0
Query:    1 MGEKSDERWKGKAVVELADTNGEVAWSVIEDFCNIHKWMSLDTCYQQEGSLGKPGLIRYCASTIVDDVEKTPTLKWVKEKLLAIDPVERCLSYEVIENNMGFKFYVATLKVLSREEGGCKIEWGFVCDPMEGWSVEGLESYVESSLQIIKKNIQLAYNTP 160
            MGEKSDERWKGKAVVELADTN EVAWSVIEDFCNIHKWMSLDT YQQEG+LGKPGLIRYCASTIVD+V+KTPTLKW KEK+LAIDPVER LSYEVIENNMGFKFYVATLKVLSREEGGCKIEWGFVCDP+EGW+VEGLESYVESSLQIIKKNIQLAYNTP
Sbjct:    1 MGEKSDERWKGKAVVELADTNTEVAWSVIEDFCNIHKWMSLDTSYQQEGTLGKPGLIRYCASTIVDEVKKTPTLKWAKEKVLAIDPVERSLSYEVIENNMGFKFYVATLKVLSREEGGCKIEWGFVCDPVEGWTVEGLESYVESSLQIIKKNIQLAYNTP 160          
BLAST of rna-XM_014645265.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6NU61|A0A4D6NU61_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g3062 PE=3 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 3.786e-96
Identity = 133/160 (83.12%), Postives = 150/160 (93.75%), Query Frame = 0
Query:    1 MGEKSDERWKGKAVVELADTNGEVAWSVIEDFCNIHKWMSLDTCYQQEGSLGKPGLIRYCASTIVDDVEKTPTLKWVKEKLLAIDPVERCLSYEVIENNMGFKFYVATLKVLSREEGGCKIEWGFVCDPMEGWSVEGLESYVESSLQIIKKNIQLAYNTP 160
            MGE+SD+RWKGK VVELA+TN EVAW+V+EDFC+IHKWMSLDTCYQ EG+LGKPGLIRYCAST+  DVE TPTLKW KEK+LAIDPVERCL+YE++ENNMGFKFYVATLKVLS EEGGCKIEW FVCDP+EGWS EGLESYVESSL+++KKNI+LAYNTP
Sbjct:    1 MGEESDKRWKGKVVVELAETNAEVAWTVVEDFCSIHKWMSLDTCYQLEGTLGKPGLIRYCASTV--DVENTPTLKWAKEKVLAIDPVERCLTYEIVENNMGFKFYVATLKVLSNEEGGCKIEWEFVCDPVEGWSCEGLESYVESSLKVVKKNIELAYNTP 158          
BLAST of rna-XM_014645265.2 vs. UniProtKB/TrEMBL
Match: tr|V7AUA2|V7AUA2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G111100g PE=3 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 2.355e-90
Identity = 124/159 (77.99%), Postives = 144/159 (90.57%), Query Frame = 0
Query:    1 MGEKSDERWKGKAVVELADTNGEVAWSVIEDFCNIHKWMSLDTCYQQEGSLGKPGLIRYCASTIVDDVEKTPTLKWVKEKLLAIDPVERCLSYEVIENNMGFKFYVATLKVLSREEGGCKIEWGFVCDPMEGWSVEGLESYVESSLQIIKKNIQLAYNT 159
            MGE+SD RW+GKAVVELADT  EVAW+V+EDFCNIHKW+ LDTCYQ EG LGKPGLIRYCAS+IVDDV+KT T+KW KEKLLAIDPV+RCL+YEV+ENNMGFKFY+ T KVLS +E GCKIEW FVCDP++GWS++GLESYVESSLQ++KKNI+LAY  
Sbjct:    1 MGEESDPRWEGKAVVELADTTAEVAWTVLEDFCNIHKWIPLDTCYQLEGILGKPGLIRYCASSIVDDVDKTSTVKWAKEKLLAIDPVQRCLTYEVVENNMGFKFYLGTFKVLSMKEDGCKIEWEFVCDPVQGWSLQGLESYVESSLQVMKKNIELAYKA 159          
BLAST of rna-XM_014645265.2 vs. UniProtKB/TrEMBL
Match: tr|V5N862|V5N862_PHAVU (Lachrymatory-factor synthase OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 1.714e-89
Identity = 124/159 (77.99%), Postives = 143/159 (89.94%), Query Frame = 0
Query:    1 MGEKSDERWKGKAVVELADTNGEVAWSVIEDFCNIHKWMSLDTCYQQEGSLGKPGLIRYCASTIVDDVEKTPTLKWVKEKLLAIDPVERCLSYEVIENNMGFKFYVATLKVLSREEGGCKIEWGFVCDPMEGWSVEGLESYVESSLQIIKKNIQLAYNT 159
            MGE+SD +W+GKAVVELADT  EVAW+V+EDFCNIHKW+ LDTCYQ EG LGKPGLIRYCASTIVDDVEKT T+KW KEKLLAIDPV+RCL+YEV+ENNMGFKFY+AT KVLS +E  CKIEW FVCDP++GWS++GLESYV SSLQ++KKNI+LAY  
Sbjct:    1 MGEESDPKWEGKAVVELADTTAEVAWTVLEDFCNIHKWIPLDTCYQLEGILGKPGLIRYCASTIVDDVEKTSTVKWAKEKLLAIDPVQRCLTYEVVENNMGFKFYLATFKVLSMKEDECKIEWEFVCDPVQGWSLQGLESYVVSSLQVMKKNIELAYKA 159          
BLAST of rna-XM_014645265.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2QEF0|A0A0B2QEF0_GLYSO (Lachrymatory-factor synthase OS=Glycine soja OX=3848 GN=glysoja_025042 PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 6.229e-76
Identity = 111/161 (68.94%), Postives = 135/161 (83.85%), Query Frame = 0
Query:    1 MGEKSDERWKGKAVVELADTNGEVAWSVIEDFCNIHKWMSLDTCYQQEGSLGKPGLIRYCASTIVDDV--EKTPTLKWVKEKLLAIDPVERCLSYEVIENNMGFKFYVATLKVLSREEGGCKIEWGFVCDPMEGWSVEGLESYVESSLQIIKKNIQLAYNT 159
            M E+S  +W+GKA+VE+  T  EVAW+V+EDFCNIHKW+SLDTCYQ +G LG+PGLIRYCAST+ + V  EKT T+KW KEK+LAIDPV+RCL+YEV+ENNMGFK YVATLKVL  E  GCKIEWGFV DP+EGWS +GL+SYVES+LQ + K I+ AY+T
Sbjct:    1 MEEESKSKWEGKAMVEVVGTGAEVAWAVLEDFCNIHKWISLDTCYQVDGILGQPGLIRYCASTVEEGVGAEKTTTIKWAKEKILAIDPVQRCLTYEVVENNMGFKSYVATLKVLPIEGDGCKIEWGFVSDPVEGWSCQGLKSYVESTLQSMAKKIEFAYST 161          
BLAST of rna-XM_014645265.2 vs. UniProtKB/TrEMBL
Match: tr|C6TN70|C6TN70_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100798895 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 6.229e-76
Identity = 111/161 (68.94%), Postives = 135/161 (83.85%), Query Frame = 0
Query:    1 MGEKSDERWKGKAVVELADTNGEVAWSVIEDFCNIHKWMSLDTCYQQEGSLGKPGLIRYCASTIVDDV--EKTPTLKWVKEKLLAIDPVERCLSYEVIENNMGFKFYVATLKVLSREEGGCKIEWGFVCDPMEGWSVEGLESYVESSLQIIKKNIQLAYNT 159
            M E+S  +W+GKA+VE+  T  EVAW+V+EDFCNIHKW+SLDTCYQ +G LG+PGLIRYCAST+ + V  EKT T+KW KEK+LAIDPV+RCL+YEV+ENNMGFK YVATLKVL  E  GCKIEWGFV DP+EGWS +GL+SYVES+LQ + K I+ AY+T
Sbjct:    1 MEEESKSKWEGKAMVEVVGTGAEVAWAVLEDFCNIHKWISLDTCYQVDGILGQPGLIRYCASTVEEGVGAEKTTTIKWAKEKILAIDPVQRCLTYEVVENNMGFKSYVATLKVLPIEGDGCKIEWGFVSDPVEGWSCQGLKSYVESTLQSMAKKIEFAYST 161          
BLAST of rna-XM_014645265.2 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4P886|A0A6A4P886_LUPAL (Putative polyketide cyclase/dehydrase, START-like domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00041221 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.151e-66
Identity = 98/160 (61.25%), Postives = 123/160 (76.88%), Query Frame = 0
Query:    1 MGEKSDERWKGKAVVELADTNGEVAWSVIEDFCNIHKWMSLDTCYQQEGSLGKPGLIRYCASTIVDDVEKTPTLKWVKEKLLAIDPVERCLSYEVIENNMGFKFYVATLKVLSREE----GGCKIEWGFVCDPMEGWSVEGLESYVESSLQIIKKNIQLA 156
            MGE+S  +W+GKA+VELA+ + E  W  IEDFCNIHK + +D CY+ EG  G+PGLIRYCA+TI  D  +T  + W KEKLL+IDPV+RCLSYEV ENNMGFK YVAT+KVL+  E    GGCKIEWGFV DPMEGW ++ L S+++S LQ++ KNI+ A
Sbjct:    1 MGEESKAKWEGKAIVELAENSAEQVWPYIEDFCNIHKLIPIDICYKVEGMQGQPGLIRYCATTIKGDDAETTLMNWAKEKLLSIDPVQRCLSYEVNENNMGFKSYVATVKVLAINEDAKVGGCKIEWGFVSDPMEGWRLQDLNSFIDSHLQVMAKNIEAA 160          
BLAST of rna-XM_014645265.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371HDY3|A0A371HDY3_MUCPR (Lachrymatory-factor synthase (Fragment) OS=Mucuna pruriens OX=157652 GN=LFS PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 5.736e-64
Identity = 96/157 (61.15%), Postives = 122/157 (77.71%), Query Frame = 0
Query:    1 MGEKSDERWKGKAVVELADTNGEVAWSVIEDFCNIHKWMSLDTCYQQEGSLGKPGLIRYCASTIVDDVEKTPTLKWVKEKLLAIDPVERCLSYEVIENNMGFKFYVATLKVLSREEGGCKIEWGFVCDPMEGWSVEGLESYVESSLQIIKKNIQLAY 157
            M E+S  +W+GK+ +E+A T  EVAW+ +EDFCN+HK + +DTCYQ EG +G+PGL+RYCA+  V  V  T T+ WVKEKLLAIDPV+ CLSYE+ ENNMGFK YV TLKVL   + GCKIEWGFV DP+EGWS + L +YV+SSLQ + + IQLA+
Sbjct:    1 MAEESGLKWEGKSAIEVAGTGPEVAWAALEDFCNVHKLIPIDTCYQAEGVVGQPGLVRYCANA-VKGVADTTTILWVKEKLLAIDPVQHCLSYEITENNMGFKSYVTTLKVLPDRD-GCKIEWGFVSDPVEGWSFQDLVAYVQSSLQSMAEKIQLAH 155          
The following BLAST results are available for this feature:
BLAST of rna-XM_014645265.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
sp|P59082|LFS_ALLCE1.517e-1535.43Lachrymatory-factor synthase OS=Allium cepa OX=467... [more]
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BLAST of rna-XM_014645265.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 3
Match NameE-valueIdentityDescription
AT4G32870.16.358e-4647.68| Polyketide cyclase/dehydrase and lipid transport... [more]
AT2G25770.29.343e-4041.72| Polyketide cyclase/dehydrase and lipid transport... [more]
AT2G25770.19.343e-4041.72| Polyketide cyclase/dehydrase and lipid transport... [more]
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BLAST of rna-XM_014645265.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3U422|A0A1S3U422_VIGRR6.030e-114100.00lachrymatory-factor synthase OS=Vigna radiata var.... [more]
tr|A0A0S3RCD1|A0A0S3RCD1_PHAAN5.190e-10793.75Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9UGJ5|A0A0L9UGJ5_PHAAN5.190e-10793.75Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A4D6NU61|A0A4D6NU61_VIGUN3.786e-9683.13Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|V7AUA2|V7AUA2_PHAVU2.355e-9077.99Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|V5N862|V5N862_PHAVU1.714e-8977.99Lachrymatory-factor synthase OS=Phaseolus vulgaris... [more]
tr|A0A0B2QEF0|A0A0B2QEF0_GLYSO6.229e-7668.94Lachrymatory-factor synthase OS=Glycine soja OX=38... [more]
tr|C6TN70|C6TN70_SOYBN6.229e-7668.94Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A6A4P886|A0A6A4P886_LUPAL4.151e-6661.25Putative polyketide cyclase/dehydrase, START-like ... [more]
tr|A0A371HDY3|A0A371HDY3_MUCPR5.736e-6461.15Lachrymatory-factor synthase (Fragment) OS=Mucuna ... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019587Polyketide cyclase/dehydrasePFAMPF10604Polyketide_cyc2coord: 20..147
e-value: 1.1E-20
score: 74.4
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 2..158
e-value: 4.3E-44
score: 152.7
NoneNo IPR availablePANTHERPTHR33789LACHRYMATORY-FACTOR SYNTHASEcoord: 4..157
NoneNo IPR availableCDDcd07821PYR_PYL_RCAR_likecoord: 9..154
e-value: 1.86295E-29
score: 103.173
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 20..153

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014645265.2_VrVC1973A-SNU_v1 ID=rna-XM_014645265.2_VrVC1973A-SNU_v1; Name=rna-XM_014645265.2; organism=Vigna radiata; type=mRNA; length=483bp
ATGGGAGAGAAATCTGATGAAAGATGGAAAGGTAAAGCAGTGGTTGAGCT
TGCAGACACAAATGGTGAAGTAGCATGGAGTGTGATAGAGGATTTCTGCA
ACATCCATAAGTGGATGTCACTAGACACATGCTATCAACAAGAGGGTAGT
CTTGGCAAACCAGGTCTCATCAGATACTGTGCTTCAACCATTGTTGATGA
TGTGGAGAAGACCCCAACATTGAAGTGGGTCAAAGAGAAGCTACTTGCCA
TTGATCCTGTTGAACGATGTTTGAGCTATGAAGTTATTGAGAACAACATG
GGATTTAAGTTCTATGTGGCCACACTCAAAGTGCTGTCAAGGGAGGAGGG
AGGATGCAAGATTGAATGGGGATTTGTCTGTGATCCAATGGAAGGGTGGA
GTGTTGAAGGTTTGGAGTCATATGTTGAGTCTTCTCTGCAGATCATAAAG
AAGAACATCCAACTTGCATACAACACACCATAG
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protein sequence of rna-XM_014645265.2_VrVC1973A-SNU_v1

>rna-XM_014645265.2_VrVC1973A-SNU_v1 ID=rna-XM_014645265.2_VrVC1973A-SNU_v1; Name=rna-XM_014645265.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=160bp
MGEKSDERWKGKAVVELADTNGEVAWSVIEDFCNIHKWMSLDTCYQQEGS
LGKPGLIRYCASTIVDDVEKTPTLKWVKEKLLAIDPVERCLSYEVIENNM
GFKFYVATLKVLSREEGGCKIEWGFVCDPMEGWSVEGLESYVESSLQIIK
KNIQLAYNTP
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mRNA from alignment at chr05:16535522..16538877+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014645265.2_VrVC1973A-SNU_v1 ID=rna-XM_014645265.2_VrVC1973A-SNU_v1; Name=rna-XM_014645265.2; organism=Vigna radiata; type=mRNA; length=3356bp; location=Sequence derived from: chr05:16535522..16538877+ (Vigna radiata
AGACTCTGGGTTGTTTTATGCATAGCTTCCATTGAGTGTAACTATTTCGA GGTAAGTCAATTTATCcaattgaaattatgttatatatttattaattata ttatagaaTATAATACGCAAAAATAAGAGTTTAGTAATAATGATAGTTTA GATGGTTTTCCAATTTAGATatattaaagattaattattttttttccaat ccaagaatatataatttattgataatagaAATACTTTTAACAAGTTTTAA CCTAtaggtaattaataataaaatacttttaacatGTTATAACCTAtagg taattaataatagaattGCTAGTTTTACTTTAGggtatacttttaataat ttttaacccGTCAATCTTTATTCTACATTTACAATAGTTAATTAACAATA GAATTACTTTTAACAAGTACTCTGCTAATCTTCAAGCTTTTCTGTGCTAG TCCCTATCAAAGTTGTAGATAATCTTTATCAGGACCTAAATTAACaatag aaacattttttaaCTAATAAGTTTTACTCCGCTAATATTCCTTGAAGTTG ATGAAAGACAAACACATCCTAAATACTTTTAACAAATACTATTATGATAT GTtctaaatatatgatatttaaatagttaataatagAAACACTCTTAACA AGTTGTAAGAGTAATATTCTTGAATGATGATGAGAAAGAAACACAGTAGT CCAGATACTTTCAAGTTCTAAATATTGGATTTGCTTTTAATTCTTTGTAt tctgctttttttttcttttttattttgtacattaagttttaaaatcctca aactttgtttttttaaatattctatttcagttgttttaattaaaacgATG ATTGGTTGATTTAAATAATTCAGAGTGTCAAACAAACAGAGTATTGTGAA CCTACTGAACCTACACTCAGTTTACATATATGTTAACACAGGTTTTAATC atggttttgtttttaaatatttcatgcTGTGTCAAGAGTTTATTTGGTTA ACTTCCTTAACTAAAACATTAGTTAGGGTAACAAGAAAGgactaaaataa acaattttcaaaacacGAAATACCATATTGaacttttaaacttttaaact ttAATGTCGAAAACGTACAATATTAAAACATAGaagaatgaaataatata acaaatgtATACCAATAACTATTTTGGATGCACTTTTTTGTAATCATACA TTGTGAaagctttttaaataaaaatattaaaagattaaaatgaacattta aattgattagatgtaaaatttaaatgtttagaGCATATATACGTATATAT TAACTTCTTTACTGAACATATGGAGTGTTTTTCtataaagaatattaaaa ttaactttggATCCAAACAAAGCTCTTAATaacaataacttattttatgC ACTTTTGGGTTAACTAGTTTCAGTATTACAAAAGTGTTAAGAGGTACTGG TATTTATTTTggatgagtatttttttttttatgtttttgattaTTTGTGA GAGTCTtctaacataaaatttaaaactaaacaCCACCTCAACTTGGCCTT TTATtatatagagagaaaagaaagaataaggTAACACCTGTTAGGActaa aaagattaataaaaaatgtaattcattttataaattaatttctcttttaa aaataaaattcacactTAAACAAGTCttagtaaataattttgtttaagaa gATTAACAATTTGTATCAGGAAAATTATGCAATTGGTTACAATTTTTACG GTGAAAGTATTTGAAGATgggtttaaacctaactcaaacCTACAAACCAG Cttgtaaaataatgtttatacttcacatatatattataaattggtcttat ttaTAGTCAATGTAGAACTTTCACCTAAAAGTCACAAAGTGCTAACATTT TCTTTATGCAAAATCGAATCTTGAATCCTTTTCTTGATCAAAGTCATTTT CATGACTTTTTTTTAGGATGTTTCTTTCTGTTTTCTTAATAAGCGTATta gtgattaattttttaatttttttctctaatcaTTTCATTCTAACATTAAC TTTTGTATGTAATGATACTTTAAATCTTAAGTCTTGGATCATGCTTTTTT ATTGAAAGATTATTCTTGTCCGAAAAGATGTtcaattgaaagaaaaacac atggGAAGAGGACAAATGAATAACTTGACTTGTGCTGTAACTTTAATGAT CAGCAGCAGATTCCTATTCTATTTCTATCATGTATAGTTGCACACCActg cttttcttcttctttttttttttttttaaaaaaaaaagaatataaacatA CTTTTacttattcaaatttttaaaatataaggatGACTCAGTATTAAAGA TATAATAGGTAATAAGAAAGATAGCGAGTTAAACTCGttctattaaaaat ttgaagatttaagattgatttaatgaatttgaaaaagacaatgaaaaaaa aagatataaattcaatttctttagtatcaaataataaaaactaacacCCA TCAAATATGCTACTTCTTTTTAGCACTGATATTTAGACATTAACACAATA AACACACCGCATGCATAGCAATCTTCTCATTAACTCATTACTCTTTTTcg tttttctattttagaaatAGCATAGTTTGTGCATTTTCTGTATTAAGTGG AGTGATGTATAAAACTGTTTGAGTATAAAGTGTAGACAAGAACTATGGGA GAGAAATCTGATGAAAGATGGAAAGGTAAAGCAGTGGTTGAGCTTGCAGA CACAAATGGTGAAGTAGCATGGAGTGTGATAGAGGATTTCTGCAACATCC ATAAGTGGATGTCACTAGACACATGCTATCAACAAGAGGGTAGTCTTGGC AAACCAGGTCTCATCAGATACTGTGCTTCAACCATTGTTGATGATGTGGA GAAGACCCCAACATTGAAGTGGGTCAAAGAGAAGCTACTTGCCATTGATC CTGTTGAACGATGTTTGAGCTATGAAGTTATTGAGAACAACATGGGATTT AAGTTCTATGTGGCCACACTCAAAGTGCTGTCAAGGGAGGAGGGAGGATG CAAGATTGAATGGGGATTTGTCTGTGATCCAATGGAAGGGTGGAGTGTTG AAGGTTTGGAGTCATATGTTGAGTCTTCTCTGCAGATCATAAAGAAGAAC ATCCAACTTGCATACAACACACCATAGGTTTTCACATCTGGTCAGATTAA TCAATCTCCGTGTTTGAAATTTCTGCAATTAATAATCAAGCATAAACTAA TATTTGCTTGCCGTTAAACTTTTCTAGAagtgtttgtttgtttaattCTC TCAAAACTCAAAAGTATAATGTTGGCTTGTGGTTAAACTTTTATGCAAac tgtttt
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Coding sequence (CDS) from alignment at chr05:16535522..16538877+

>rna-XM_014645265.2_VrVC1973A-SNU_v1 ID=rna-XM_014645265.2_VrVC1973A-SNU_v1; Name=rna-XM_014645265.2; organism=Vigna radiata; type=CDS; length=483bp; location=Sequence derived from: chr05:16535522..16538877+ (Vigna radiata
ATGGGAGAGAAATCTGATGAAAGATGGAAAGGTAAAGCAGTGGTTGAGCT
TGCAGACACAAATGGTGAAGTAGCATGGAGTGTGATAGAGGATTTCTGCA
ACATCCATAAGTGGATGTCACTAGACACATGCTATCAACAAGAGGGTAGT
CTTGGCAAACCAGGTCTCATCAGATACTGTGCTTCAACCATTGTTGATGA
TGTGGAGAAGACCCCAACATTGAAGTGGGTCAAAGAGAAGCTACTTGCCA
TTGATCCTGTTGAACGATGTTTGAGCTATGAAGTTATTGAGAACAACATG
GGATTTAAGTTCTATGTGGCCACACTCAAAGTGCTGTCAAGGGAGGAGGG
AGGATGCAAGATTGAATGGGGATTTGTCTGTGATCCAATGGAAGGGTGGA
GTGTTGAAGGTTTGGAGTCATATGTTGAGTCTTCTCTGCAGATCATAAAG
AAGAACATCCAACTTGCATACAACACACCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR019587Polyketide_cyclase/dehydratase
IPR023393START-like_dom_sf