rna-XM_014645376.2

Transcript Overview
Namerna-XM_014645376.2
Unique Namerna-XM_014645376.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length339
Productflowering-promoting factor 1-like protein 1
References
External references for this mRNA
DatabaseAccession
GeneID106761808
GenbankXM_014645376.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr05chromosomechr05:17657882..17658265 -Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anvrvL0108Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0313Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0357Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvrvL488Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvrvL636Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0703Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0717Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivrvL355Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivrvL504Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL304Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL409Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvrvL0457Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL341Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvrvL470Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvrvL034Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL404Pisum sativum Cameor genome v1aPisum sativum
psvrvL420Pisum sativum Cameor genome v1aPisum sativum
psvrvL507Pisum sativum Cameor genome v1aPisum sativum
pvvrvL743Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL258Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL354Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvrvR164Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvL272Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL369Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR468Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR490Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvzwsR385Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR351Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR425Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR391Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR372Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR398Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvrvL278Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL385Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL441Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL586Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL280Cicer arietinum
carvrvL397Cicer arietinum
ccavrvL319Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL451Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR394Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR406Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR427Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR436Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR456Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR464Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR482Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR383Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR395Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL221Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL285Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL031Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL692Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR367Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR375Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr01.374Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
evm.model.Chr09.1685Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun08g063300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigan.03G222700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
evm.model.Chr08.108Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.009G100300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun09g201700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-TanjilR_19340Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vum_02G00737.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Cc_v2.0_11224.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Psat06G0088500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Ca_10972Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
XM_058872603.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
jg35839.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
LR48_mrnaVigan07g235200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_004498532.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Va07G060100.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigst.03G139600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Phvul.001G058400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun08g063300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vfaba.Hedin2.R1.3g200760.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigan.02G089500.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
PvulFLAVERTChr09.705Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Ca_09661.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vum_03G01552.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-KK1_003477Cajanus cajan Asha genome v1.0Cajanus cajan
Vigun09g201700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Tiffany.R1.3g165680.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Va04G062200.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_014648804.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106761808gene-LOC106761808_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014645376.2-1exon-XM_014645376.2-1_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014500862.2cds-XP_014500862.2_VrVC1973A-SNU_v1Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014645376.2_VrVC1973A-SNU_v1rna-XM_014645376.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014645376.2_VrVC1973A-SNU_v1rna-XM_014645376.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
[Close]
BLAST of rna-XM_014645376.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q5Q0B3|FLP1_ARATH (Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FLP1 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 1.352e-43
Identity = 73/123 (59.35%), Postives = 87/123 (70.73%), Query Frame = 0 
Query:    7 MSGVWVFKKEG-FRLMENG---------------ETERSRLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDL--QLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRD 111
            MSGVWVF K G  RL+EN                  ++ R+++K+LVH+ S EVVSSYGSLE+IL NLGWERYY  D    L QFHK +S DLISLP+DFSKF S++MYDIV+KNPNVFHVRD
Sbjct:    1 MSGVWVFNKNGVMRLVENPYNQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVVSSYGSLEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFSKFNSIHMYDIVVKNPNVFHVRD 123
[Close]
BLAST of rna-XM_014645376.2 vs. UniProtKB/Swiss-Prot
Match: sp|O24340|FPF1_SINAL (Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 5.030e-43
Identity = 71/112 (63.39%), Postives = 87/112 (77.68%), Query Frame = 0 
Query:    7 MSGVWVFKKEGFRLMEN-----GETERSRLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGR-DLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRDN 112
            MSGVWVFK    RL+EN     G+T     ++KV+V++ +GEV+SSY +LEQIL +LGWERY+G  D  L QFHK SS DLISLPKDF+KF+SVYMYDIV+KNPN FHVRD+
Sbjct:    1 MSGVWVFKNGVIRLVENPNQSGGDTNS---RRKVMVYLPTGEVISSYSTLEQILRSLGWERYFGGGDTDLLQFHKRSSIDLISLPKDFTKFSSVYMYDIVVKNPNYFHVRDS 109
[Close]
BLAST of rna-XM_014645376.2 vs. UniProtKB/Swiss-Prot
Match: sp|O23624|FPF1_ARATH (Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 5.141e-43
Identity = 70/109 (64.22%), Postives = 85/109 (77.98%), Query Frame = 0 
Query:    7 MSGVWVFKKEGFRLMENGETERS--RLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGR-DLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRDN 112
            MSGVWVFK    RL+EN     S  + ++KV+V++ +GEVVSSY +LEQIL +LGWERY+G  D  L QFHK SS DLISLP+DF+KF SVYMYDIV+KNPN FHVRD+
Sbjct:    1 MSGVWVFKNGVIRLVENPNQSGSDTQNRRKVMVYLPTGEVVSSYSTLEQILQSLGWERYFGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRDS 109
[Close]
BLAST of rna-XM_014645376.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LXB5|FLP2_ARATH (Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLP2 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 7.107e-43
Identity = 69/110 (62.73%), Postives = 82/110 (74.55%), Query Frame = 0 
Query:    7 MSGVWVFKKEGFRLMEN-----GETERSRLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRD 111
            MSGVWVF     RL+EN     G + +S  ++ VLV++ +GE VSSY SLEQIL +LGWERY+  D  L Q+HK SS DLISLP+DFSKF SVYMYDIV+KNPN FHVRD
Sbjct:    1 MSGVWVFNNGVIRLVENPNQSGGVSTQSHGRRNVLVYLPTGEAVSSYSSLEQILRSLGWERYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVRD 110
[Close]
BLAST of rna-XM_014645376.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LGE3|FLP1_ORYSJ (Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAA1 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.186e-35
Identity = 62/109 (56.88%), Postives = 75/109 (68.81%), Query Frame = 0 
Query:    7 MSGVWVFKKEGFRLMENGE----TERSRLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRD 111
            MSGVWVFK    RL+E  +    T  +  ++K LVH  SG+VVSSY +LE  L+ LGWERYY  D  L+QFHK  S DLISLP DFS F+SV+MYDIV+KN + F V D
Sbjct:    1 MSGVWVFKNGVVRLVEKQQATAGTAVAGGRRKALVHTPSGQVVSSYAALEARLTALGWERYY-EDPSLFQFHKRGSLDLISLPADFSAFSSVHMYDIVVKNRDSFRVVD 108
[Close]
BLAST of rna-XM_014645376.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q0E1D7|FLP3_ORYSJ (Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0460200 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.299e-32
Identity = 62/113 (54.87%), Postives = 75/113 (66.37%), Query Frame = 0 
Query:    7 MSGVWVFKKEGFRLMENGETERS--------RLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRD 111
            M+GVWVFK    R +EN  +E S          ++KVLVHV SGEVV+SY  LE+ L  LGWERY   D  L QFH+ S+  LIS+P+DFSKF  V+MYDIV+K  NVF VRD
Sbjct:    1 MAGVWVFKDGIVRRVENPGSEESSSAGDGGGGGRRKVLVHVPSGEVVASYEVLERRLRELGWERYLT-DPCLLQFHQRSTVHLISVPRDFSKFKLVHMYDIVVKTRNVFEVRD 112
[Close]
BLAST of rna-XM_014645376.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q8LR63|FLP2_ORYSJ (Flowering-promoting factor 1-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0933500 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.697e-31
Identity = 59/126 (46.83%), Postives = 77/126 (61.11%), Query Frame = 0 
Query:    7 MSGVWVFKKEGFRLMENGETERS--------------RLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDL-------QLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRD 111
            MSGVWVF+    +L+EN     +               +++K L+H+ +GEVV+SY SLE+ L+ LGWERYY            + QFHK SS DLISLPKDFS+F SV+MYDIV+KN + F V D
Sbjct:    1 MSGVWVFRNGVVKLVENPPASANSGGGGGGGGGGGGGGIRRKALLHMPTGEVVTSYASLERKLAALGWERYYSGGGGAAAAAAMMLQFHKRSSVDLISLPKDFSQFGSVHMYDIVVKNRDAFRVID 126
[Close]
BLAST of rna-XM_014645376.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q0JEF5|FLP4_ORYSJ (Flowering-promoting factor 1-like protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0282400 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.794e-26
Identity = 55/111 (49.55%), Postives = 69/111 (62.16%), Query Frame = 0 
Query:    7 MSGVWVFKKEGFRLMENGETERSRLKK------KVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRD 111
            M+GVWVF+    R  ++    R R         KVLVHV S EVV+SY  LE+ L  LGWERY   D  L QFH+ S+  LIS+P+DFS+   V+MYD+V+K  NVF VRD
Sbjct:    1 MAGVWVFEDGMVRRADSEAPSRGRGVGGGGGGGKVLVHVPSSEVVTSYEVLERRLRELGWERYLN-DPCLLQFHQRSTVHLISVPRDFSRLKLVHMYDVVVKTRNVFEVRD 110
[Close]
BLAST of rna-XM_014645376.2 vs. UniProtKB/Swiss-Prot
Match: sp|A3BNA1|FLP5_ORYSJ (Flowering-promoting factor 1-like protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0671000 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.388e-26
Identity = 51/104 (49.04%), Postives = 65/104 (62.50%), Query Frame = 0 
Query:    9 GVWVFKKEGFRLMENGETERSRLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKH-SSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRD 111
            GVWVF+  G   +E   T R     K LVHVA+ EV+ S  +LE+ L  LGWERYY  D    Q H+   S DLIS+P+DFS+F S +MYD+V+KN + F V D
Sbjct:    5 GVWVFRNNGVMELEEQATSR-----KALVHVATSEVIRSTEALERRLGALGWERYY-EDRATLQLHRRDGSADLISIPRDFSRFRSTHMYDVVVKNRDHFKVVD 102
[Close]
BLAST of rna-XM_014645376.2 vs. Araport11
Match: AT4G31380.1 (| flowering-promoting factor-like protein | Chr4:15230008-15230382 FORWARD LENGTH=124 | 201606)

HSP 1 Score: 141.354 bits (355), Expect = 1.383e-44
Identity = 73/123 (59.35%), Postives = 87/123 (70.73%), Query Frame = 0 
Query:    7 MSGVWVFKKEG-FRLMENG---------------ETERSRLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDL--QLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRD 111
            MSGVWVF K G  RL+EN                  ++ R+++K+LVH+ S EVVSSYGSLE+IL NLGWERYY  D    L QFHK +S DLISLP+DFSKF S++MYDIV+KNPNVFHVRD
Sbjct:    1 MSGVWVFNKNGVMRLVENPYNQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVVSSYGSLEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFSKFNSIHMYDIVVKNPNVFHVRD 123
[Close]
BLAST of rna-XM_014645376.2 vs. Araport11
Match: AT5G24860.1 (| flowering promoting factor 1 | Chr5:8541822-8542154 FORWARD LENGTH=110 | 201606)

HSP 1 Score: 139.428 bits (350), Expect = 5.260e-44
Identity = 70/109 (64.22%), Postives = 85/109 (77.98%), Query Frame = 0 
Query:    7 MSGVWVFKKEGFRLMENGETERS--RLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGR-DLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRDN 112
            MSGVWVFK    RL+EN     S  + ++KV+V++ +GEVVSSY +LEQIL +LGWERY+G  D  L QFHK SS DLISLP+DF+KF SVYMYDIV+KNPN FHVRD+
Sbjct:    1 MSGVWVFKNGVIRLVENPNQSGSDTQNRRKVMVYLPTGEVVSSYSTLEQILQSLGWERYFGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRDS 109
[Close]
BLAST of rna-XM_014645376.2 vs. Araport11
Match: AT5G10625.1 (| flowering-promoting factor-like protein | Chr5:3358934-3359272 FORWARD LENGTH=112 | 201606)

HSP 1 Score: 139.043 bits (349), Expect = 7.272e-44
Identity = 69/110 (62.73%), Postives = 82/110 (74.55%), Query Frame = 0 
Query:    7 MSGVWVFKKEGFRLMEN-----GETERSRLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRD 111
            MSGVWVF     RL+EN     G + +S  ++ VLV++ +GE VSSY SLEQIL +LGWERY+  D  L Q+HK SS DLISLP+DFSKF SVYMYDIV+KNPN FHVRD
Sbjct:    1 MSGVWVFNNGVIRLVENPNQSGGVSTQSHGRRNVLVYLPTGEAVSSYSSLEQILRSLGWERYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVRD 110
[Close]
BLAST of rna-XM_014645376.2 vs. Araport11
Match: AT5G24860.3 (| flowering promoting factor 1 | Chr5:8541714-8542154 FORWARD LENGTH=146 | 201606)

HSP 1 Score: 139.428 bits (350), Expect = 1.608e-43
Identity = 70/109 (64.22%), Postives = 85/109 (77.98%), Query Frame = 0 
Query:    7 MSGVWVFKKEGFRLMENGETERS--RLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGR-DLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRDN 112
            MSGVWVFK    RL+EN     S  + ++KV+V++ +GEVVSSY +LEQIL +LGWERY+G  D  L QFHK SS DLISLP+DF+KF SVYMYDIV+KNPN FHVRD+
Sbjct:   37 MSGVWVFKNGVIRLVENPNQSGSDTQNRRKVMVYLPTGEVVSSYSTLEQILQSLGWERYFGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRDS 145
[Close]
BLAST of rna-XM_014645376.2 vs. Araport11
Match: AT5G24860.2 (| flowering promoting factor 1 | Chr5:8541633-8542154 FORWARD LENGTH=173 | 201606)

HSP 1 Score: 139.813 bits (351), Expect = 2.833e-43
Identity = 70/109 (64.22%), Postives = 85/109 (77.98%), Query Frame = 0 
Query:    7 MSGVWVFKKEGFRLMENGETERS--RLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGR-DLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRDN 112
            MSGVWVFK    RL+EN     S  + ++KV+V++ +GEVVSSY +LEQIL +LGWERY+G  D  L QFHK SS DLISLP+DF+KF SVYMYDIV+KNPN FHVRD+
Sbjct:   64 MSGVWVFKNGVIRLVENPNQSGSDTQNRRKVMVYLPTGEVVSSYSTLEQILQSLGWERYFGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRDS 172
[Close]
BLAST of rna-XM_014645376.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3U4B8|A0A1S3U4B8_VIGRR (flowering-promoting factor 1-like protein 1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106761808 PE=3 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 3.232e-77
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 
Query:    1 MVVCEKMSGVWVFKKEGFRLMENGETERSRLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRDN 112
            MVVCEKMSGVWVFKKEGFRLMENGETERSRLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRDN
Sbjct:    1 MVVCEKMSGVWVFKKEGFRLMENGETERSRLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRDN 112
[Close]
BLAST of rna-XM_014645376.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6NT74|A0A4D6NT74_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g3175 PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 4.078e-70
Identity = 102/106 (96.23%), Postives = 104/106 (98.11%), Query Frame = 0 
Query:    7 MSGVWVFKKEGFRLMENGETERSRLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRDN 112
            MSGVWVFKKEGFRLMENGE ER R+KKKVLVH+ASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRDN
Sbjct:    1 MSGVWVFKKEGFRLMENGEAERCRMKKKVLVHLASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRDN 106
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BLAST of rna-XM_014645376.2 vs. UniProtKB/TrEMBL
Match: tr|V7AWU6|V7AWU6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G100300g PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.492e-59
Identity = 89/105 (84.76%), Postives = 97/105 (92.38%), Query Frame = 0 
Query:    7 MSGVWVFKKEGFRLMENGETERSRLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRD 111
            MSGVWVFKK+GFRLMEN + ER  L KKVLV++ASGEVVSSY SLE+ILSNLGWERYYGRDLQ YQFHKHSSTDLISLP +FSKF+SV+MYDIVIKNPNVFHVRD
Sbjct:    1 MSGVWVFKKDGFRLMENRQAERCSLNKKVLVYLASGEVVSSYSSLEEILSNLGWERYYGRDLQFYQFHKHSSTDLISLPLNFSKFSSVHMYDIVIKNPNVFHVRD 105
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BLAST of rna-XM_014645376.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371F4G5|A0A371F4G5_MUCPR (Flowering-promoting factor 1 (Fragment) OS=Mucuna pruriens OX=157652 GN=FPF1 PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 4.309e-59
Identity = 90/107 (84.11%), Postives = 96/107 (89.72%), Query Frame = 0 
Query:    7 MSGVWVFKKEGFRLMENGETE--RSRLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRD 111
            MSGVWVF K GFRL+ENG+ E  +  L KKVLVH+ SGEVVSSY SLEQIL+NLGWERYYGRD QLYQFHKHSSTDLISLPKDFSKFTS+YMYDIVIKNPNVFHVRD
Sbjct:    1 MSGVWVFNKGGFRLVENGQAEGKKCSLNKKVLVHLPSGEVVSSYSSLEQILTNLGWERYYGRDPQLYQFHKHSSTDLISLPKDFSKFTSIYMYDIVIKNPNVFHVRD 107
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BLAST of rna-XM_014645376.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RC38|A0A0S3RC38_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G089500 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 8.645e-59
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 0 
Query:   21 MENGETERSRLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRDN 112
            MENGE ER RLKKKVLVH+ASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRDN
Sbjct:    1 MENGEGERCRLKKKVLVHLASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRDN 92
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BLAST of rna-XM_014645376.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445KX18|A0A445KX18_GLYSO (Flowering-promoting factor 1 OS=Glycine soja OX=3848 GN=D0Y65_009055 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 9.088e-59
Identity = 93/108 (86.11%), Postives = 97/108 (89.81%), Query Frame = 0 
Query:    7 MSGVWVFKKEGFRLMENGETER---SRLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRD 111
            MSGVWVFKK+GFRLME  + E    S LKKKVLVH+ASGEVVSSY SLEQILSNLGWERYYGRD QLYQFHK SSTDLISLPK+FSKFTSVYMYDIVIKNPNVFHVRD
Sbjct:    1 MSGVWVFKKDGFRLMEKRKAEGIACSSLKKKVLVHLASGEVVSSYSSLEQILSNLGWERYYGRDPQLYQFHKRSSTDLISLPKNFSKFTSVYMYDIVIKNPNVFHVRD 108
[Close]
BLAST of rna-XM_014645376.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0K5G7|A0A0R0K5G7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_04G074800 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.744e-58
Identity = 93/108 (86.11%), Postives = 97/108 (89.81%), Query Frame = 0 
Query:    7 MSGVWVFKKEGFRLMENGETER---SRLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRD 111
            MSGVWVFKK+GFRLME  + E    S LKKKVLVH+ASGEVVSSY SLEQILSNLGWERYYGRD QLYQFHK SSTDLISLPK+FSKFTSVYMYDIVIKNPNVFHVRD
Sbjct:    1 MSGVWVFKKDGFRLMEKRKAEGIACSSLKKKVLVHLASGEVVSSYSSLEQILSNLGWERYYGRDPQLYQFHKRSSTDLISLPKNFSKFTSVYMYDIVIKNPNVFHVRD 108
[Close]
BLAST of rna-XM_014645376.2 vs. UniProtKB/TrEMBL
Match: tr|A0A151SR42|A0A151SR42_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_003477 PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.504e-57
Identity = 87/107 (81.31%), Postives = 94/107 (87.85%), Query Frame = 0 
Query:    7 MSGVWVFKKEGFRLME--NGETERSRLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRD 111
            MSGVWVFKKEGFRLME    E +   L +K+LVH+ SGEV+SSY  LEQIL+NLGWERYYGRD QLYQFHKHSSTDLISLPKDFSKFTS+YMYDIVIKNPNVFHVRD
Sbjct:    1 MSGVWVFKKEGFRLMEKRQAEGKAHSLNQKILVHLPSGEVISSYSMLEQILTNLGWERYYGRDPQLYQFHKHSSTDLISLPKDFSKFTSIYMYDIVIKNPNVFHVRD 107
[Close]
BLAST of rna-XM_014645376.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1U8ELR5|A0A1U8ELR5_CAPAN (flowering-promoting factor 1-like OS=Capsicum annuum OX=4072 GN=LOC107845055 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 9.225e-50
Identity = 74/105 (70.48%), Postives = 92/105 (87.62%), Query Frame = 0 
Query:    7 MSGVWVFKKEGFRLMENGETERSRLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRD 111
            MSGVWVFK   FRL+ENG  ++++ ++KVL+H+ SG+VVSSY SLE+IL+ LGWERYYG D +L+QFHKHSS DLISLPKDF+KF S++MYDIV+KNPNVFHVRD
Sbjct:    1 MSGVWVFKNGVFRLVENGSGDQAQRRRKVLLHLPSGQVVSSYCSLERILNGLGWERYYGGDTELFQFHKHSSIDLISLPKDFAKFNSIHMYDIVVKNPNVFHVRD 105
[Close]
BLAST of rna-XM_014645376.2 vs. UniProtKB/TrEMBL
Match: tr|A0A314UN62|A0A314UN62_PRUYE (Flowering-promoting factor 1 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_35473 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.755e-49
Identity = 76/105 (72.38%), Postives = 86/105 (81.90%), Query Frame = 0 
Query:    7 MSGVWVFKKEGFRLMENGETERSRLKKKVLVHVASGEVVSSYGSLEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIVIKNPNVFHVRD 111
            MSGVWVFK    RL+EN + E S  +KK LVH+ SG+VVSSY +LEQIL+ LGWERYYG D  L+QFHK SS DLISLP+DFSKF SVYMYDIVIKNPN+FHVRD
Sbjct:    1 MSGVWVFKNGVIRLVENPQAETSSSRKKALVHLPSGQVVSSYSTLEQILTGLGWERYYGGDPDLFQFHKRSSIDLISLPRDFSKFNSVYMYDIVIKNPNIFHVRD 105
The following BLAST results are available for this feature:
BLAST of rna-XM_014645376.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 9
Match NameE-valueIdentityDescription
sp|Q5Q0B3|FLP1_ARATH1.352e-4359.35Flowering-promoting factor 1-like protein 1 OS=Ara... [more]
sp|O24340|FPF1_SINAL5.030e-4363.39Flowering-promoting factor 1 OS=Sinapis alba OX=37... [more]
sp|O23624|FPF1_ARATH5.141e-4364.22Flowering-promoting factor 1 OS=Arabidopsis thalia... [more]
sp|Q9LXB5|FLP2_ARATH7.107e-4362.73Flowering-promoting factor 1-like protein 2 OS=Ara... [more]
sp|Q9LGE3|FLP1_ORYSJ9.186e-3556.88Flowering-promoting factor 1-like protein 1 OS=Ory... [more]
sp|Q0E1D7|FLP3_ORYSJ1.299e-3254.87Flowering-promoting factor 1-like protein 3 OS=Ory... [more]
sp|Q8LR63|FLP2_ORYSJ1.697e-3146.83Flowering-promoting factor 1-like protein 2 OS=Ory... [more]
sp|Q0JEF5|FLP4_ORYSJ3.794e-2649.55Flowering-promoting factor 1-like protein 4 OS=Ory... [more]
sp|A3BNA1|FLP5_ORYSJ8.388e-2649.04Flowering-promoting factor 1-like protein 5 OS=Ory... [more]
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BLAST of rna-XM_014645376.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G31380.11.383e-4459.35| flowering-promoting factor-like protein | Chr4:1... [more]
AT5G24860.15.260e-4464.22| flowering promoting factor 1 | Chr5:8541822-8542... [more]
AT5G10625.17.272e-4462.73| flowering-promoting factor-like protein | Chr5:3... [more]
AT5G24860.31.608e-4364.22| flowering promoting factor 1 | Chr5:8541714-8542... [more]
AT5G24860.22.833e-4364.22| flowering promoting factor 1 | Chr5:8541633-8542... [more]
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BLAST of rna-XM_014645376.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3U4B8|A0A1S3U4B8_VIGRR3.232e-77100.00flowering-promoting factor 1-like protein 1 OS=Vig... [more]
tr|A0A4D6NT74|A0A4D6NT74_VIGUN4.078e-7096.23Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|V7AWU6|V7AWU6_PHAVU1.492e-5984.76Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A371F4G5|A0A371F4G5_MUCPR4.309e-5984.11Flowering-promoting factor 1 (Fragment) OS=Mucuna ... [more]
tr|A0A0S3RC38|A0A0S3RC38_PHAAN8.645e-5996.74Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A445KX18|A0A445KX18_GLYSO9.088e-5986.11Flowering-promoting factor 1 OS=Glycine soja OX=38... [more]
tr|A0A0R0K5G7|A0A0R0K5G7_SOYBN1.744e-5886.11Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A151SR42|A0A151SR42_CAJCA1.504e-5781.31Uncharacterized protein OS=Cajanus cajan OX=3821 G... [more]
tr|A0A1U8ELR5|A0A1U8ELR5_CAPAN9.225e-5070.48flowering-promoting factor 1-like OS=Capsicum annu... [more]
tr|A0A314UN62|A0A314UN62_PRUYE3.755e-4972.38Flowering-promoting factor 1 OS=Prunus yedoensis v... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039274Flowering-promoting factor 1PANTHERPTHR33433FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 1coord: 7..111

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014645376.2_VrVC1973A-SNU_v1 ID=rna-XM_014645376.2_VrVC1973A-SNU_v1; Name=rna-XM_014645376.2; organism=Vigna radiata; type=mRNA; length=339bp
ATGGTTGTCTGTGAAAAAATGTCTGGGGTTTGGGTATTCAAGAAAGAAGG
GTTTCGTTTAATGGAAAATGGTGAAACAGAGAGAAGCAGATTGAAGAAAA
AGGTTTTGGTTCACGTGGCAAGTGGTGAAGTTGTGTCTTCGTACGGTTCA
TTGGAGCAAATATTGAGTAATTTAGGGTGGGAAAGGTACTATGGAAGAGA
CCTTCAACTGTACCAATTTCACAAGCATTCTTCCACTGACCTTATTTCCC
TTCCAAAGGACTTCTCCAAGTTCACCTCTGTCTATATGTATGATATTGTC
ATCAAGAACCCTAATGTCTTCCATGTAAGGGATAACTGA
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protein sequence of rna-XM_014645376.2_VrVC1973A-SNU_v1

>rna-XM_014645376.2_VrVC1973A-SNU_v1 ID=rna-XM_014645376.2_VrVC1973A-SNU_v1; Name=rna-XM_014645376.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=112bp
MVVCEKMSGVWVFKKEGFRLMENGETERSRLKKKVLVHVASGEVVSSYGS
LEQILSNLGWERYYGRDLQLYQFHKHSSTDLISLPKDFSKFTSVYMYDIV
IKNPNVFHVRDN
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mRNA from alignment at chr05:17657882..17658265-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014645376.2_VrVC1973A-SNU_v1 ID=rna-XM_014645376.2_VrVC1973A-SNU_v1; Name=rna-XM_014645376.2; organism=Vigna radiata; type=mRNA; length=384bp; location=Sequence derived from: chr05:17657882..17658265- (Vigna radiata
AGCATGGTTGTCTGTGAAAAAATGTCTGGGGTTTGGGTATTCAAGAAAGA
AGGGTTTCGTTTAATGGAAAATGGTGAAACAGAGAGAAGCAGATTGAAGA
AAAAGGTTTTGGTTCACGTGGCAAGTGGTGAAGTTGTGTCTTCGTACGGT
TCATTGGAGCAAATATTGAGTAATTTAGGGTGGGAAAGGTACTATGGAAG
AGACCTTCAACTGTACCAATTTCACAAGCATTCTTCCACTGACCTTATTT
CCCTTCCAAAGGACTTCTCCAAGTTCACCTCTGTCTATATGTATGATATT
GTCATCAAGAACCCTAATGTCTTCCATGTAAGGGATAACTGACCCATTCC
ATTACCTTTTTTCTTCCTCTACAACAATATTCTA
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Coding sequence (CDS) from alignment at chr05:17657882..17658265-

>rna-XM_014645376.2_VrVC1973A-SNU_v1 ID=rna-XM_014645376.2_VrVC1973A-SNU_v1; Name=rna-XM_014645376.2; organism=Vigna radiata; type=CDS; length=339bp; location=Sequence derived from: chr05:17657882..17658265- (Vigna radiata
ATGGTTGTCTGTGAAAAAATGTCTGGGGTTTGGGTATTCAAGAAAGAAGG
GTTTCGTTTAATGGAAAATGGTGAAACAGAGAGAAGCAGATTGAAGAAAA
AGGTTTTGGTTCACGTGGCAAGTGGTGAAGTTGTGTCTTCGTACGGTTCA
TTGGAGCAAATATTGAGTAATTTAGGGTGGGAAAGGTACTATGGAAGAGA
CCTTCAACTGTACCAATTTCACAAGCATTCTTCCACTGACCTTATTTCCC
TTCCAAAGGACTTCTCCAAGTTCACCTCTGTCTATATGTATGATATTGTC
ATCAAGAACCCTAATGTCTTCCATGTAAGGGATAACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR039274FPF1
Vocabulary: Biological Process
TermDefinition
GO:0009909regulation of flower development