rna-XM_014648154.2

Transcript Overview
Namerna-XM_014648154.2
Unique Namerna-XM_014648154.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length927
ProductS-antigen protein
References
External references for this mRNA
DatabaseAccession
GeneID106763966
GenbankXM_014648154.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr06chromosomechr06:33589198..33591052 +Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL505Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvrvL652Vigna angularis Jingnong 6 genome v1.1Vigna angularis
caivrvL369Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivrvL374Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivrvL548Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL314Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvrvL0613Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0791Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL363Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvrvL046Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL515Pisum sativum Cameor genome v1aPisum sativum
pvvrvL763Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL363Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvrvL163Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvL377Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR591Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvzwsR501Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR405Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR448Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR431Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR459Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvrvL288Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL456Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL604Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL287Cicer arietinum
ccavrvL333Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL458Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR465Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR473Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR564Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR459Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR467Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL238Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL302Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL039Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL711Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR422Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR433Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vum_03G01778.1Vigna umbellata FF25 genome v1.0Vigna umbellata
evm.model.Chr08.375Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Va07G066000.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun08g037700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-KK1_004835Cajanus cajan Asha genome v1.0Cajanus cajan
Ca_09170Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigan.03G254600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Cr_10723.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigst.03G159600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Ca_09492.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
LR48_mrnaVigan07g257900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Cc_v2.0_11456.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigun08g037700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.001G035300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat6g020440.1Pisum sativum Cameor genome v1aPisum sativum
rna-XM_004498840.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Psat06G0057500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
PvulFLAVERTChr01.226Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
XM_058869047.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106763966gene-LOC106763966_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014648154.2-1exon-XM_014648154.2-1_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014648154.2-2exon-XM_014648154.2-2_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014503640.1cds-XP_014503640.1_VrVC1973A-SNU_v1Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014648154.2_VrVC1973A-SNU_v1rna-XM_014648154.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014648154.2_VrVC1973A-SNU_v1rna-XM_014648154.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
[Close]
BLAST of rna-XM_014648154.2 vs. Araport11
Match: AT5G60030.2 (| hypothetical protein | Chr5:24172082-24172960 REVERSE LENGTH=256 | 201606)

HSP 1 Score: 77.7962 bits (190), Expect = 2.384e-16
Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 0 
Query:    1 MKTISGHCASVKDVSLSKAAKILSKFVSADNGASHIISAYLHRACASFSELNQIHKEL 58
            MKT++G   S + +SLSKAAK+LS F S+DNGAS  +SAYL RA A+F+EL   H+E+
Sbjct:    1 MKTVTGRVVSAEPISLSKAAKLLSGFASSDNGASQDVSAYLRRASAAFTELKSFHREI 58
[Close]
BLAST of rna-XM_014648154.2 vs. Araport11
Match: AT5G60030.3 (| hypothetical protein | Chr5:24172082-24172960 REVERSE LENGTH=231 | 201606)

HSP 1 Score: 77.0258 bits (188), Expect = 2.472e-16
Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 0 
Query:    1 MKTISGHCASVKDVSLSKAAKILSKFVSADNGASHIISAYLHRACASFSELNQIHKEL 58
            MKT++G   S + +SLSKAAK+LS F S+DNGAS  +SAYL RA A+F+EL   H+E+
Sbjct:    1 MKTVTGRVVSAEPISLSKAAKLLSGFASSDNGASQDVSAYLRRASAAFTELKSFHREI 58
[Close]
BLAST of rna-XM_014648154.2 vs. Araport11
Match: AT5G60030.1 (| hypothetical protein | Chr5:24172082-24172960 REVERSE LENGTH=292 | 201606)

HSP 1 Score: 77.7962 bits (190), Expect = 3.101e-16
Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 0 
Query:    1 MKTISGHCASVKDVSLSKAAKILSKFVSADNGASHIISAYLHRACASFSELNQIHKEL 58
            MKT++G   S + +SLSKAAK+LS F S+DNGAS  +SAYL RA A+F+EL   H+E+
Sbjct:    1 MKTVTGRVVSAEPISLSKAAKLLSGFASSDNGASQDVSAYLRRASAAFTELKSFHREI 58
[Close]
BLAST of rna-XM_014648154.2 vs. Araport11
Match: AT1G75335.1 (| nucleolar-like protein | Chr1:28268576-28268866 FORWARD LENGTH=96 | 201606)

HSP 1 Score: 68.9366 bits (167), Expect = 1.110e-14
Identity = 33/58 (56.90%), Postives = 43/58 (74.14%), Query Frame = 0 
Query:    1 MKTISGHCASVKDVSLSKAAKILSKFVSADNGASHIISAYLHRACASFSELNQIHKEL 58
            MKT++G   S K +SLSKAA +LS FVS++NGAS  +SAYL RA  +F EL  IH+E+
Sbjct:    1 MKTVTGRVNSAKPISLSKAATLLSGFVSSENGASQDVSAYLRRASGAFIELKSIHREI 58
[Close]
BLAST of rna-XM_014648154.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UC85|A0A1S3UC85_VIGRR (S-antigen protein OS=Vigna radiata var. radiata OX=3916 GN=LOC106763966 PE=4 SV=1)

HSP 1 Score: 619.002 bits (1595), Expect = 0.000e+0
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0 
Query:    1 MKTISGHCASVKDVSLSKAAKILSKFVSADNGASHIISAYLHRACASFSELNQIHKELDPSHSRKKHKKQRTETGTDIGRVVENSVRSVNINQELSLEHVKSIELRRQQTGNENTDLYDDKSNQAIVKSNLELNGSVGYETENVGRSEMLKKKKKKKLEVGSLQNGDSAVKFGDGIDDSKLSNGAQVAIESGREQGNEGDFKQEMEEGRKQKSAKKKDKPSYEDEVENEKGMEQQKDVEEKLSNGIGSENGVLGGSQDSQIKKKMKYENGRKNTLYAEEGKLDDKPEHPSGGLSKKKMKRKHRGDNKT 308
            MKTISGHCASVKDVSLSKAAKILSKFVSADNGASHIISAYLHRACASFSELNQIHKELDPSHSRKKHKKQRTETGTDIGRVVENSVRSVNINQELSLEHVKSIELRRQQTGNENTDLYDDKSNQAIVKSNLELNGSVGYETENVGRSEMLKKKKKKKLEVGSLQNGDSAVKFGDGIDDSKLSNGAQVAIESGREQGNEGDFKQEMEEGRKQKSAKKKDKPSYEDEVENEKGMEQQKDVEEKLSNGIGSENGVLGGSQDSQIKKKMKYENGRKNTLYAEEGKLDDKPEHPSGGLSKKKMKRKHRGDNKT
Sbjct:    1 MKTISGHCASVKDVSLSKAAKILSKFVSADNGASHIISAYLHRACASFSELNQIHKELDPSHSRKKHKKQRTETGTDIGRVVENSVRSVNINQELSLEHVKSIELRRQQTGNENTDLYDDKSNQAIVKSNLELNGSVGYETENVGRSEMLKKKKKKKLEVGSLQNGDSAVKFGDGIDDSKLSNGAQVAIESGREQGNEGDFKQEMEEGRKQKSAKKKDKPSYEDEVENEKGMEQQKDVEEKLSNGIGSENGVLGGSQDSQIKKKMKYENGRKNTLYAEEGKLDDKPEHPSGGLSKKKMKRKHRGDNKT 308
[Close]
BLAST of rna-XM_014648154.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RPK4|A0A0S3RPK4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G254600 PE=4 SV=1)

HSP 1 Score: 494.197 bits (1271), Expect = 3.152e-174
Identity = 279/319 (87.46%), Postives = 290/319 (90.91%), Query Frame = 0 
Query:    1 MKTISGHCASVKDVSLSKAAKILSKFVSADNGASHIISAYLHRACASFSELNQIHKELDPSHSRKKHKKQRTETGTDIGRVVENSVRSVNINQELSLEHVKSIELRRQQTGNENTDLYDDKSNQAIVKSNLELNGSVGYETENVGRSEMLKKKKKKKLEVGSLQNGDSAVKFGDGIDDSKLSNGAQVAIESGREQGNEGDFKQEMEEGRKQKSAKKKDKPSYEDEVENEKGMEQQKDVEEKLSNGIGSENGVLGGSQDSQIKKKMKYENGRKNTLYAEEGKLD-----------DKPEHPSGGLSKKKMKRKHRGDNKT 308
            M+TISGHCASVKDVSLSKAAKIL+KFVSADNGASHIISAYLHRACASFSELNQIHKELDPSHSRKKHKK RTETGTD GRVVENSVRSVNINQELSLEHVKSIELRRQQTGNENTDL DDKSNQ +VKSN ELNGSVGYETEN+G SEMLKKKKKKKLEV SLQNGDSAVKF DGIDDSKL NGAQ+AI SGREQGN+GDFK EMEEGRKQKSAKKKDK SYEDEVENEKG+EQQKD+EEKLSNGI  ENG LGGSQDSQIKKK KYE G++NTLYAEEGKL+           DKPEHPSGGLSKKKMKRKH GDNKT
Sbjct:    1 MRTISGHCASVKDVSLSKAAKILTKFVSADNGASHIISAYLHRACASFSELNQIHKELDPSHSRKKHKKHRTETGTDSGRVVENSVRSVNINQELSLEHVKSIELRRQQTGNENTDLDDDKSNQTMVKSNQELNGSVGYETENLGGSEMLKKKKKKKLEVESLQNGDSAVKFEDGIDDSKLPNGAQLAIASGREQGNDGDFKPEMEEGRKQKSAKKKDKASYEDEVENEKGIEQQKDIEEKLSNGIDRENGGLGGSQDSQIKKKKKYEKGKENTLYAEEGKLERSKNRKSDDVGDKPEHPSGGLSKKKMKRKHSGDNKT 319
[Close]
BLAST of rna-XM_014648154.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9V167|A0A0L9V167_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan07g257900 PE=4 SV=1)

HSP 1 Score: 494.197 bits (1271), Expect = 3.152e-174
Identity = 279/319 (87.46%), Postives = 290/319 (90.91%), Query Frame = 0 
Query:    1 MKTISGHCASVKDVSLSKAAKILSKFVSADNGASHIISAYLHRACASFSELNQIHKELDPSHSRKKHKKQRTETGTDIGRVVENSVRSVNINQELSLEHVKSIELRRQQTGNENTDLYDDKSNQAIVKSNLELNGSVGYETENVGRSEMLKKKKKKKLEVGSLQNGDSAVKFGDGIDDSKLSNGAQVAIESGREQGNEGDFKQEMEEGRKQKSAKKKDKPSYEDEVENEKGMEQQKDVEEKLSNGIGSENGVLGGSQDSQIKKKMKYENGRKNTLYAEEGKLD-----------DKPEHPSGGLSKKKMKRKHRGDNKT 308
            M+TISGHCASVKDVSLSKAAKIL+KFVSADNGASHIISAYLHRACASFSELNQIHKELDPSHSRKKHKK RTETGTD GRVVENSVRSVNINQELSLEHVKSIELRRQQTGNENTDL DDKSNQ +VKSN ELNGSVGYETEN+G SEMLKKKKKKKLEV SLQNGDSAVKF DGIDDSKL NGAQ+AI SGREQGN+GDFK EMEEGRKQKSAKKKDK SYEDEVENEKG+EQQKD+EEKLSNGI  ENG LGGSQDSQIKKK KYE G++NTLYAEEGKL+           DKPEHPSGGLSKKKMKRKH GDNKT
Sbjct:    1 MRTISGHCASVKDVSLSKAAKILTKFVSADNGASHIISAYLHRACASFSELNQIHKELDPSHSRKKHKKHRTETGTDSGRVVENSVRSVNINQELSLEHVKSIELRRQQTGNENTDLDDDKSNQTMVKSNQELNGSVGYETENLGGSEMLKKKKKKKLEVESLQNGDSAVKFEDGIDDSKLPNGAQLAIASGREQGNDGDFKPEMEEGRKQKSAKKKDKASYEDEVENEKGIEQQKDIEEKLSNGIDRENGGLGGSQDSQIKKKKKYEKGKENTLYAEEGKLERSKNRKSDDVGDKPEHPSGGLSKKKMKRKHSGDNKT 319
[Close]
BLAST of rna-XM_014648154.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MGI6|A0A4D6MGI6_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG7g396 PE=4 SV=1)

HSP 1 Score: 447.203 bits (1149), Expect = 1.271e-155
Identity = 271/321 (84.42%), Postives = 280/321 (87.23%), Query Frame = 0 
Query:    1 MKTISGHCASVKDVSLSKAAKILSKFVSADNGASHIISAYLHRACASFSELNQIHKELDPSHSRKKHKKQRTETGTDIGRVVENSVRSVNINQELSLEHVKSIELRRQQTGNENTDLYDDKSNQAIVKSNLELNGSVGYETENVGRSEML-KKKKKKKLEVGSLQNGDSAVKFGDGIDDSKLSNGAQVAIESGREQGNEGDFKQEMEEGRKQKSAKKKDKPSYEDEVENEKGMEQQKDVEEKLSNGIGSENGVLGGSQDSQIKKKMKYENGRKNTLYAEE---------GKLDD---KPEHPSGGLSKKKMKRKHRGDNKT 308
            MKTISGHCASVKDVSLSKAAKILSKFVSA+NGASHIISAYLHRA ASFSELNQIHKELDPSHS KKHKK RTETGTD GRVVENSVRSVNINQELSLEHVKSIE RRQQTGNEN DL DDKSNQ IVKSN ELNGSVGYETENVG SEML KKKKKKKLEV SLQNGDS VKFG+GIDDSKL NG Q+ IESGREQGNEGDFK EMEEGRKQKSAKKK K SYEDEVENEKG+EQQK++E+KLSNGI  ENG LGGSQDSQIKKK KYE G+ NTLYAEE         GK DD   KPEHPSGGL+KKKMKRKH GD  T
Sbjct:    1 MKTISGHCASVKDVSLSKAAKILSKFVSAENGASHIISAYLHRASASFSELNQIHKELDPSHSHKKHKKHRTETGTDSGRVVENSVRSVNINQELSLEHVKSIESRRQQTGNENADLDDDKSNQTIVKSNQELNGSVGYETENVGGSEMLKKKKKKKKLEVESLQNGDSTVKFGEGIDDSKLPNGTQIEIESGREQGNEGDFKPEMEEGRKQKSAKKKHKASYEDEVENEKGIEQQKEIEKKLSNGIDGENGGLGGSQDSQIKKKKKYEKGKVNTLYAEEEGKLEQSKNGKSDDVEEKPEHPSGGLTKKKMKRKHSGDITT 321
[Close]
BLAST of rna-XM_014648154.2 vs. UniProtKB/TrEMBL
Match: tr|V7CUE3|V7CUE3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G035300g PE=4 SV=1)

HSP 1 Score: 387.111 bits (993), Expect = 7.684e-132
Identity = 229/317 (72.24%), Postives = 254/317 (80.13%), Query Frame = 0 
Query:    1 MKTISGHCASVKDVSLSKAAKILSKFVSADNGASHIISAYLHRACASFSELNQIHKELDPSHSRKKHKKQRTETGTDIGRVVENSVRSVNINQELSLEHVKSIELRRQQTGNENTDLYDDKSNQAIVKSNLELNGSVGYETENVGRSEMLKKKKKKKLEVGSLQNGDSAVKFGDGIDDSKLSNGAQVAIESGREQGNEGD-FKQEMEEGRKQKSAKKKDKPSYEDEVENEKGMEQQKDVEEKLSNGIGSENGVLGGSQDSQIKKKMKYENGRKNTLYAEEGKL--------DDKPEHPSGGLSKKKMKRKHRGDNKT 308
            MKTISGHCASVKDVSLSKAAKI SKFV+ADNGASHIISAYL RA  SFSELNQ HKEL+ SHS KKHK+ RTET TD GRVVENS+ SV+I QELSL  VKS+ELR QQ+ N N DL D+K NQ I K N ELNG+VG+ TENV  SEM KKKK+KKLEVGS QNGD+ V FG+  DD KL NGAQV IESGREQGNEGD +  EMEEGR+QKSAKKK K SY+DEVEN K +EQQK++E+KLS GI SENG LG S DSQIKKK KYE GR+NTLYAEEGKL        DD  + P+GGL+KKKMKRKH GD K+
Sbjct:    1 MKTISGHCASVKDVSLSKAAKIFSKFVTADNGASHIISAYLRRASDSFSELNQFHKELESSHSHKKHKRHRTETDTDSGRVVENSIGSVDIKQELSLGRVKSVELRSQQSDNANADLDDEKLNQTIFKCNQELNGTVGHGTENVVGSEMHKKKKRKKLEVGSQQNGDNTVNFGEVKDDGKLPNGAQVEIESGREQGNEGDSYNPEMEEGREQKSAKKKHKASYKDEVENGKRIEQQKEIEKKLSIGIDSENGELGVSPDSQIKKKKKYEKGRENTLYAEEGKLEQSKNRKSDDVEDTPTGGLTKKKMKRKHSGDVKS 317
[Close]
BLAST of rna-XM_014648154.2 vs. UniProtKB/TrEMBL
Match: tr|I1MXB3|I1MXB3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100778066 PE=4 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 3.471e-101
Identity = 192/321 (59.81%), Postives = 227/321 (70.72%), Query Frame = 0 
Query:    1 MKTISGHCASVKDVSLSKAAKILSKFVSADNGASHIISAYLHRACASFSELNQIHKELDPSHSRKKHKKQRTETGTDIGRVVENSVRSVNINQELSLEHVKSIELRRQQTGNENTDLYDDKSNQAIVKSNLELNGSVGYETENVGRSEMLKKKKKKKLEVGSLQNGDSAVKFGDGIDDSKLSNGAQVAIESGREQGNEGDFKQEMEEGRKQKSAKKK-----DKPSYEDEVENEKGMEQQKDVEEKLSNGIGSENGVLGGSQDSQIKKKMKYENGRKNTLYAEEGKL--------DD---KPEHPSGGLSKKKMKRKHRGD 305
            MKTISGHC SVKD+S+SKAAKIL+KFVSADNGASH+I+AYLHRA ASF+EL Q+HKEL  SHS KKHK+ RTE G   G+VVENSV+SV+IN+ELS+ HVKS   +RQQTG+ N D  D+  +Q       EL+G +GY+TENV   EM KKKKKKK EV SL + DS VKFG    D KL NG+Q  +ES REQGNEGD K  MEEGRKQKS KK         SY+ E EN K +EQ+K++E+ L N +  ENGVLG SQ  QIKKK KY+ G +  LYAEE KL        DD   +PE P+G LSKKK K+ H GD
Sbjct:    1 MKTISGHCVSVKDISVSKAAKILTKFVSADNGASHVINAYLHRASASFNELKQLHKELGSSHSHKKHKRHRTENGNGSGKVVENSVQSVDINKELSIGHVKSDLFKRQQTGSGNADQDDENFSQ-------ELDGFIGYQTENVDGGEMHKKKKKKKQEVESLHDIDSTVKFGVREADGKLPNGSQNEVESAREQGNEGDIKTGMEEGRKQKSGKKPKVTTSSFSSYKGEAENGKDLEQRKEMEKTLCNSLEGENGVLGSSQYLQIKKKKKYKKGSETKLYAEEVKLEQSKNRRSDDAEGRPEDPTGDLSKKKRKKTHNGD 314
[Close]
BLAST of rna-XM_014648154.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445GAM7|A0A445GAM7_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_046722 PE=4 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 3.471e-101
Identity = 192/321 (59.81%), Postives = 227/321 (70.72%), Query Frame = 0 
Query:    1 MKTISGHCASVKDVSLSKAAKILSKFVSADNGASHIISAYLHRACASFSELNQIHKELDPSHSRKKHKKQRTETGTDIGRVVENSVRSVNINQELSLEHVKSIELRRQQTGNENTDLYDDKSNQAIVKSNLELNGSVGYETENVGRSEMLKKKKKKKLEVGSLQNGDSAVKFGDGIDDSKLSNGAQVAIESGREQGNEGDFKQEMEEGRKQKSAKKK-----DKPSYEDEVENEKGMEQQKDVEEKLSNGIGSENGVLGGSQDSQIKKKMKYENGRKNTLYAEEGKL--------DD---KPEHPSGGLSKKKMKRKHRGD 305
            MKTISGHC SVKD+S+SKAAKIL+KFVSADNGASH+I+AYLHRA ASF+EL Q+HKEL  SHS KKHK+ RTE G   G+VVENSV+SV+IN+ELS+ HVKS   +RQQTG+ N D  D+  +Q       EL+G +GY+TENV   EM KKKKKKK EV SL + DS VKFG    D KL NG+Q  +ES REQGNEGD K  MEEGRKQKS KK         SY+ E EN K +EQ+K++E+ L N +  ENGVLG SQ  QIKKK KY+ G +  LYAEE KL        DD   +PE P+G LSKKK K+ H GD
Sbjct:    1 MKTISGHCVSVKDISVSKAAKILTKFVSADNGASHVINAYLHRASASFNELKQLHKELGSSHSHKKHKRHRTENGNGSGKVVENSVQSVDINKELSIGHVKSDLFKRQQTGSGNADQDDENFSQ-------ELDGFIGYQTENVDGGEMHKKKKKKKQEVESLHDIDSTVKFGVREADGKLPNGSQNEVESAREQGNEGDIKTGMEEGRKQKSGKKPKVTTSSFSSYKGEAENGKDLEQRKEMEKTLCNSLEGENGVLGSSQYLQIKKKKKYKKGSETKLYAEEVKLEQSKNRRSDDAEGRPEDPTGDLSKKKRKKTHNGD 314
[Close]
BLAST of rna-XM_014648154.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371EQJ1|A0A371EQJ1_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_52715 PE=4 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 4.688e-90
Identity = 201/327 (61.47%), Postives = 232/327 (70.95%), Query Frame = 0 
Query:    1 MKTISGHCASVKDVSLSKAAKILSKFVSADNGASHIISAYLHRACASFSELNQIHKELDPSHSRKKHKKQR-TETGTDIGRVVENSVRSVNINQELSLEHVKSIELRRQQTGNENTDLYDDKSNQAIVKSNLELNGSVGYETENVGRSEMLKKKKKKKLEVGSLQNGDSAVKFGDGIDDSKLSNGAQVAIESGREQGNEGDFKQEMEEGRKQKSAKKKDKPSY------EDEVENEKGMEQQKDVEEKLSNGIGSENGVLGGSQDSQIKKKMKYENGRKNTLYAEEGKL--------DD---KPEHPSGGLSKKKMKRKH--RGDNK 307
            MKTISGHC S KD+SLSKA KILSKFVSADNGASH+I+AYLHRA A+F EL Q+HKEL+PSHS KK  K+   ETG D GRVVENSVRSV+INQEL L HVKS E RRQ+T + N D    KS Q IVK + ELNGS+ Y+TENV  SE  KKKKKK+ EV SL +GDS VKFG+   DSK   GAQ  IESGREQGNEGD    +EEG+KQKS KKK K S       + EVEN KG+EQQK++E+KLSNG+  E G L GS + +IKKK KYE G +  LYAEE KL        DD   +PE  +  L+KK+MKRK    GD K
Sbjct:    1 MKTISGHCVSEKDISLSKATKILSKFVSADNGASHVINAYLHRASAAFDELKQLHKELEPSHSHKKKHKRHRAETGDDSGRVVENSVRSVDINQELGLGHVKSKEFRRQRTDSGNADQDYGKSTQTIVKFSQELNGSIEYQTENVAGSEKHKKKKKKQ-EVESLHDGDSTVKFGEREGDSKPPTGAQNEIESGREQGNEGDANPGVEEGKKQKSVKKKHKESAGSFSNNKGEVENGKGLEQQKEIEKKLSNGMEGETGGLSGSPELKIKKKKKYEAGSEKKLYAEEVKLEQGKNRKSDDVEGRPEDQTRDLTKKRMKRKQGAVGDTK 326
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BLAST of rna-XM_014648154.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445H4H6|A0A445H4H6_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_038195 PE=4 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 1.069e-82
Identity = 182/296 (61.49%), Postives = 218/296 (73.65%), Query Frame = 0 
Query:    1 MKTISGHCASVKDVSLSKAAKILSKFVSADNGASHIISAYLHRACASFSELNQIHKELDPSHSRKKHKKQRTETGTDIGRVVENSVRSVNINQELSLEHVKSIELRRQQTGNENTDLYDDKSNQAIVKSNLELNGSVGYETENVGRSEMLKKKKKKKLEVGSLQNGDSAVKFGDGIDDSKLSNGAQVAIESGREQGNEGDFKQEMEEGRKQKSAKKKDK------PSYEDEVENEKGMEQQKDVEEKLSNGIGSENGVLGGSQDSQIKKKMKYENGRKNTLYAEEGKLDDKPEHPS 290
            MKTISGHC SVKD+S+SKAAKILSKFVSADNGASH+ +AYLHRA ASF+ELNQ+HKEL  SHS KKHK+ +TETG D G+VVENSVRSV+IN+EL L HVKS   +RQQTG+ +    D+K     ++   E++GS+GY+TENVG S+M KKKKKKK EV SL + DS VKFG+   D KL NGAQ  I+S REQGNEGD    MEEGRKQK+AKKK K       SY+DE  N KG+ QQK++E+ L  G+   NG LGGS D QI+KK KYE G  N L+AEE KL+   +  S
Sbjct:    1 MKTISGHCVSVKDISVSKAAKILSKFVSADNGASHVFNAYLHRASASFNELNQLHKELGSSHSHKKHKRHKTETGNDSGKVVENSVRSVDINEELKLGHVKSNGFKRQQTGSGSAGQDDEK----FIR---EVDGSIGYQTENVGGSQMHKKKKKKKQEVESLHDRDSTVKFGERESDGKLPNGAQNEIDSSREQGNEGDINAGMEEGRKQKNAKKKHKVSTSSVSSYKDEAVNGKGLGQQKEMEKTLCKGVEGGNGGLGGSLDLQIRKKKKYEKGSNNKLHAEEVKLEQSKDRKS 289
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BLAST of rna-XM_014648154.2 vs. UniProtKB/TrEMBL
Match: tr|I1M922|I1M922_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100819175 PE=4 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 1.069e-82
Identity = 182/296 (61.49%), Postives = 218/296 (73.65%), Query Frame = 0 
Query:    1 MKTISGHCASVKDVSLSKAAKILSKFVSADNGASHIISAYLHRACASFSELNQIHKELDPSHSRKKHKKQRTETGTDIGRVVENSVRSVNINQELSLEHVKSIELRRQQTGNENTDLYDDKSNQAIVKSNLELNGSVGYETENVGRSEMLKKKKKKKLEVGSLQNGDSAVKFGDGIDDSKLSNGAQVAIESGREQGNEGDFKQEMEEGRKQKSAKKKDK------PSYEDEVENEKGMEQQKDVEEKLSNGIGSENGVLGGSQDSQIKKKMKYENGRKNTLYAEEGKLDDKPEHPS 290
            MKTISGHC SVKD+S+SKAAKILSKFVSADNGASH+ +AYLHRA ASF+ELNQ+HKEL  SHS KKHK+ +TETG D G+VVENSVRSV+IN+EL L HVKS   +RQQTG+ +    D+K     ++   E++GS+GY+TENVG S+M KKKKKKK EV SL + DS VKFG+   D KL NGAQ  I+S REQGNEGD    MEEGRKQK+AKKK K       SY+DE  N KG+ QQK++E+ L  G+   NG LGGS D QI+KK KYE G  N L+AEE KL+   +  S
Sbjct:    1 MKTISGHCVSVKDISVSKAAKILSKFVSADNGASHVFNAYLHRASASFNELNQLHKELGSSHSHKKHKRHKTETGNDSGKVVENSVRSVDINEELKLGHVKSNGFKRQQTGSGSAGQDDEK----FIR---EVDGSIGYQTENVGGSQMHKKKKKKKQEVESLHDRDSTVKFGERESDGKLPNGAQNEIDSSREQGNEGDINAGMEEGRKQKNAKKKHKVSTSSVSSYKDEAVNGKGLGQQKEMEKTLCKGVEGGNGGLGGSLDLQIRKKKKYEKGSNNKLHAEEVKLEQSKDRKS 289
The following BLAST results are available for this feature:
BLAST of rna-XM_014648154.2 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of rna-XM_014648154.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 4
Match NameE-valueIdentityDescription
AT5G60030.22.384e-1656.90| hypothetical protein | Chr5:24172082-24172960 RE... [more]
AT5G60030.32.472e-1656.90| hypothetical protein | Chr5:24172082-24172960 RE... [more]
AT5G60030.13.101e-1656.90| hypothetical protein | Chr5:24172082-24172960 RE... [more]
AT1G75335.11.110e-1456.90| nucleolar-like protein | Chr1:28268576-28268866 ... [more]
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BLAST of rna-XM_014648154.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3UC85|A0A1S3UC85_VIGRR0.000e+0100.00S-antigen protein OS=Vigna radiata var. radiata OX... [more]
tr|A0A0S3RPK4|A0A0S3RPK4_PHAAN3.152e-17487.46Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9V167|A0A0L9V167_PHAAN3.152e-17487.46Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A4D6MGI6|A0A4D6MGI6_VIGUN1.271e-15584.42Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|V7CUE3|V7CUE3_PHAVU7.684e-13272.24Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|I1MXB3|I1MXB3_SOYBN3.471e-10159.81Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A445GAM7|A0A445GAM7_GLYSO3.471e-10159.81Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|A0A371EQJ1|A0A371EQJ1_MUCPR4.688e-9061.47Uncharacterized protein (Fragment) OS=Mucuna pruri... [more]
tr|A0A445H4H6|A0A445H4H6_GLYSO1.069e-8261.49Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|I1M922|I1M922_SOYBN1.069e-8261.49Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..243
NoneNo IPR availablePANTHERPTHR48227DNA TOPOISOMERASE 1-LIKEcoord: 1..303

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014648154.2_VrVC1973A-SNU_v1 ID=rna-XM_014648154.2_VrVC1973A-SNU_v1; Name=rna-XM_014648154.2; organism=Vigna radiata; type=mRNA; length=927bp
ATGAAGACAATTTCTGGGCATTGTGCCTCGGTGAAAGACGTATCACTATC
CAAAGCGGCGAAAATTCTGTCAAAGTTTGTCTCTGCTGATAATGGTGCTT
CACATATCATCAGTGCATATCTCCATCGAGCCTGTGCTTCTTTCAGCGAG
CTCAACCAGATCCACAAGGAGCTTGATCCCTCACACTCTCGTAAGAAGCA
CAAAAAGCAAAGAACTGAGACTGGTACTGACATCGGGAGGGTAGTGGAAA
ATTCCGTTCGGAGTGTTAATATAAACCAGGAGCTCAGCCTTGAACATGTA
AAATCTATTGAATTGAGAAGACAGCAGACTGGCAATGAGAATACTGATCT
ATATGATGACAAATCAAATCAGGCAATTGTTAAAAGTAATCTAGAACTTA
ATGGTTCTGTTGGGTATGAGACAGAAAATGTGGGTAGGAGTGAGATGCTT
AAGAAGAAGAAAAAGAAGAAACTGGAAGTTGGGTCCCTGCAAAACGGAGA
TAGCGCTGTTAAATTTGGAGATGGGATAGATGATAGCAAGCTGTCTAATG
GGGCGCAAGTTGCAATTGAGTCAGGCAGAGAACAGGGCAATGAAGGTGAT
TTTAAACAAGAGATGGAAGAGGGAAGAAAGCAGAAAAGTGCAAAGAAGAA
GGACAAGCCAAGTTATGAGGATGAGGTTGAGAATGAAAAAGGAATGGAGC
AACAGAAAGATGTAGAAGAAAAACTATCCAACGGTATAGGTAGTGAAAAT
GGAGTGCTCGGTGGCTCCCAGGACTCACAAATCAAGAAAAAAATGAAATA
TGAGAACGGAAGGAAGAATACATTATATGCTGAAGAGGGAAAGTTGGATG
ACAAACCAGAACATCCAAGTGGGGGTTTGAGTAAGAAGAAAATGAAAAGG
AAACACCGTGGTGATAATAAAACTTAG
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protein sequence of rna-XM_014648154.2_VrVC1973A-SNU_v1

>rna-XM_014648154.2_VrVC1973A-SNU_v1 ID=rna-XM_014648154.2_VrVC1973A-SNU_v1; Name=rna-XM_014648154.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=308bp
MKTISGHCASVKDVSLSKAAKILSKFVSADNGASHIISAYLHRACASFSE
LNQIHKELDPSHSRKKHKKQRTETGTDIGRVVENSVRSVNINQELSLEHV
KSIELRRQQTGNENTDLYDDKSNQAIVKSNLELNGSVGYETENVGRSEML
KKKKKKKLEVGSLQNGDSAVKFGDGIDDSKLSNGAQVAIESGREQGNEGD
FKQEMEEGRKQKSAKKKDKPSYEDEVENEKGMEQQKDVEEKLSNGIGSEN
GVLGGSQDSQIKKKMKYENGRKNTLYAEEGKLDDKPEHPSGGLSKKKMKR
KHRGDNKT
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mRNA from alignment at chr06:33589198..33591052+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014648154.2_VrVC1973A-SNU_v1 ID=rna-XM_014648154.2_VrVC1973A-SNU_v1; Name=rna-XM_014648154.2; organism=Vigna radiata; type=mRNA; length=1855bp; location=Sequence derived from: chr06:33589198..33591052+ (Vigna radiata
CAAGCCCAATCAAACCCAATTCCATTGGTAACAAAAACCTAGTTTCACTG
AGACTAGCAGTGGCGGCAAACTCCATTATTATCGTTGTCACCTTCATCCA
AATTCCAAAACCCAGACAAGGCTTAAAGGTATTagggttttctttcttct
atttcttctttctcaatctACTTTCATAGTATACTTATGATTATTGAAGT
GATTCAGTTTGCGTCCTTTCAATTGGGAAATGTGATTACCGTTGTAAATT
TTTTCGCTTTAGATTGATATTTAATACGATTAGAGTgagttttgtttctt
tctaaGCATAGGGTCTGTAGCTTCCCCAAATCCGCGCATCTTTTAATTCT
ATTTGGTTGTTAACGTTAATCTCTGGCAATTACAGTTAGCTTGCGATTTC
AGAGTCTACAGTTTTACGTCGTTTTTTTAGTAAATGTGTGGTAGGGATTA
CAATCTGTCATTTTGTGCTTCCTTTGAATTGTGATGTGAATGagttgatt
ttttgttttaggtttTGCCAAATGCCGTGAGTGAATTTTGAAGTTGAGAT
TTTGAGTGTTTTTTGGAAATGTGCCGCTCTAATCCCCGTTGTATTCCTTT
TGAAATTTAGATATATGCGTAAAGGCTAAAGGGGAGGAAGATGAAGACAA
TTTCTGGGCATTGTGCCTCGGTGAAAGACGTATCACTATCCAAAGCGGCG
AAAATTCTGTCAAAGTTTGTCTCTGCTGATAATGGTGCTTCACATATCAT
CAGTGCATATCTCCATCGAGCCTGTGCTTCTTTCAGCGAGCTCAACCAGA
TCCACAAGGAGCTTGATCCCTCACACTCTCGTAAGAAGCACAAAAAGCAA
AGAACTGAGACTGGTACTGACATCGGGAGGGTAGTGGAAAATTCCGTTCG
GAGTGTTAATATAAACCAGGAGCTCAGCCTTGAACATGTAAAATCTATTG
AATTGAGAAGACAGCAGACTGGCAATGAGAATACTGATCTATATGATGAC
AAATCAAATCAGGCAATTGTTAAAAGTAATCTAGAACTTAATGGTTCTGT
TGGGTATGAGACAGAAAATGTGGGTAGGAGTGAGATgcttaagaagaaga
aaaagaagaaactggAAGTTGGGTCCCTGCAAAACGGAGATAGCGCTGTT
AAATTTGGAGATGGGATAGATGATAGCAAGCTGTCTAATGGGGCGCAAGT
TGCAATTGAGTCAGGCAGAGAACAGGGCAATGAAGGTGATTTTAAACAAG
AGATGGAAGAGGGAAGAAAGCAGAAAAGTGCAAAGAAGAAGGACAAGCCA
AGTTATGAGGATGAGGTTGAGAATGAAAAAGGAATGGAGCAACAGAAAGA
TGTAGAAGAAAAACTATCCAACGGTATAGGTAGTGAAAATGGAGTGCTCG
GTGGCTCCCAGGACTcacaaatcaagaaaaaaatgaaatatgagaACGGA
AGGAAGAATACATTATATGCTGAAGAGGGAAAGTTGGATGACAAACCAGA
ACATCCAAGTGGGGGTTTGagtaagaagaaaatgaaaaggaaacacCGTG
GTGATAATAAAACTTAGGTGTTTTACAAACTTTATAGTTTGTTAATCCTT
TTTCAAATTGTTGAGGGGATTTGCACTTGTATTGTTTGTAGTATCAGTTT
TTGAACTacaatacttttatttagtCTTAAACAAATGTTGCTGCATTCAA
AACATTGATTGCAATTATCAGCTGTTGGTGATACTAAATTCATTGTAGAC
TGTGTAGATCAGTCACCACTCACCGGGGATCATCGGCTCTTGTAGTTTAC
ATATCCTCAAggttactattttttatttattggagAAGAaatagttattg
tgtca
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Coding sequence (CDS) from alignment at chr06:33589198..33591052+

>rna-XM_014648154.2_VrVC1973A-SNU_v1 ID=rna-XM_014648154.2_VrVC1973A-SNU_v1; Name=rna-XM_014648154.2; organism=Vigna radiata; type=CDS; length=927bp; location=Sequence derived from: chr06:33589198..33591052+ (Vigna radiata
ATGAAGACAATTTCTGGGCATTGTGCCTCGGTGAAAGACGTATCACTATC
CAAAGCGGCGAAAATTCTGTCAAAGTTTGTCTCTGCTGATAATGGTGCTT
CACATATCATCAGTGCATATCTCCATCGAGCCTGTGCTTCTTTCAGCGAG
CTCAACCAGATCCACAAGGAGCTTGATCCCTCACACTCTCGTAAGAAGCA
CAAAAAGCAAAGAACTGAGACTGGTACTGACATCGGGAGGGTAGTGGAAA
ATTCCGTTCGGAGTGTTAATATAAACCAGGAGCTCAGCCTTGAACATGTA
AAATCTATTGAATTGAGAAGACAGCAGACTGGCAATGAGAATACTGATCT
ATATGATGACAAATCAAATCAGGCAATTGTTAAAAGTAATCTAGAACTTA
ATGGTTCTGTTGGGTATGAGACAGAAAATGTGGGTAGGAGTGAGATgctt
aagaagaagaaaaagaagaaactggAAGTTGGGTCCCTGCAAAACGGAGA
TAGCGCTGTTAAATTTGGAGATGGGATAGATGATAGCAAGCTGTCTAATG
GGGCGCAAGTTGCAATTGAGTCAGGCAGAGAACAGGGCAATGAAGGTGAT
TTTAAACAAGAGATGGAAGAGGGAAGAAAGCAGAAAAGTGCAAAGAAGAA
GGACAAGCCAAGTTATGAGGATGAGGTTGAGAATGAAAAAGGAATGGAGC
AACAGAAAGATGTAGAAGAAAAACTATCCAACGGTATAGGTAGTGAAAAT
GGAGTGCTCGGTGGCTCCCAGGACTcacaaatcaagaaaaaaatgaaata
tgagaACGGAAGGAAGAATACATTATATGCTGAAGAGGGAAAGTTGGATG
ACAAACCAGAACATCCAAGTGGGGGTTTGagtaagaagaaaatgaaaagg
aaacacCGTGGTGATAATAAAACTTAG
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