rna-XM_014648185.2
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Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_014648185.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q94K80|LRP1C_ARATH (La-related protein 1C OS=Arabidopsis thaliana OX=3702 GN=LARP1C PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 6.977e-38 Identity = 154/511 (30.14%), Postives = 229/511 (44.81%), Query Frame = 0
Query: 11 HSSSTASRPADANSPKFPRKNLPSPWAQVVRGGELESVPGINQSPPSVPGINQSPP--------STSSSTSSLITDQAPSSDCSPKVIPSSSPAMDNSNTVGVADSSDDAEDNADRSKKPVWNKPSNGVVVETGPVMGAESWPSLSASTKGSVKLPAESSSKTVAD---GSLSTSQVPMT-----SQAPQKQSNTNVNANPGTNYNVPGRQRSMK-RVGGSGIVSGPSQSNFSNPPPPPPPPPFPVYHLPPPVSYGMVTVVP--EPAPRDHYRNGNWDPRSMMRGFVPGMNEYRGSSHRNYFGHNS--------RGDGSYHNSYGSRHDQDRRNYG-------NTRDTFVPQPRMPPRGLLRHPPPSPA---AFVGHQPI---GPFANPMGFSEFYYYQPVTMDQFSGMPYFTPGPPLATFISATESALSNMIL-RQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWL 480
H S TAS A SP+ P + + SPW Q+VRG ES P + + P QS S ++ T++++T +A + D + S G +DNA KKPVW +PSNG E GPVMGA SWP+LS +TK + S K++ D S ++S VP+T + P + N NP N++ RQRS K R G SG +G + P + G T +P P+PR G N+ G + +N+ G + +G++H S+G R +Q+ N N R+ R P +RHP P+ F+ QP PF + S +Y MPY TP P F + +M L +QI+YYFSD NL+ D +LR M+ +G+VP+ ++A F +V LT N+Q I+++++ S VEV GD +R+ ++W W+
Sbjct: 23 HGSPTASV---AQSPRRPSRQVSSPWTQIVRG---ESEPIAAAAAVAGPSSPQSRAPIEPIASVSVAAPTAAVLTVEAAAGD-------------EKSEASG-------GQDNA--GKKPVWKRPSNGAS-EVGPVMGASSWPALSETTKAPSNKSSSDSLKSLGDVPSSSSASSSVPVTQGIANASVPAPKQAGRANPNPTPNHS---RQRSFKQRNGASGSANGT---------------------VSQPSAQGSFTELPSHNPSPR-------------------GQNQKNGFASQNHGGTENPSQRDSYRNQNGNHHQSHGGRRNQEHGNQNWTFQRSFNGREGNAQSQRGTP-AFVRHPSPTVQPIPQFMAAQPFPSHIPFPTELAQSSYYPR----------MPYMTPIPHGPQFFYHYQDPPLHMKLHKQIQYYFSDENLITDIYLRGFMNNEGFVPLRVVAGFKKVAELTDNIQQIVEALQNSPHVEVQGDFIRKRDNWQNWV 450
BLAST of rna-XM_014648185.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q8RWR2|LRP1B_ARATH (La-related protein 1B OS=Arabidopsis thaliana OX=3702 GN=LARP1B PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 1.112e-28 Identity = 86/233 (36.91%), Postives = 119/233 (51.07%), Query Frame = 0
Query: 286 GSSHRNYFGHNSRGDGSYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQFSGMPYFTPGP-PLA-TFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSSKTRSESTSTSSSPRGSRSNN--LTANFQAITLEE 514
G SHRNY G + H Q +R G R PQ M P P S A ++ +G + P+ + + Y Q V M S P GP PL + ++ L N IL Q+EYYFS NL RDE LR +M+++GWVPV +IA F R+ LT N+Q IL+++R+S +VE+ G+ LRR DW K+L + S S P SNN L + +++TL E
Sbjct: 242 GFSHRNYSGRD-------------MHLQPQRGVGMIR----PQMLMGPPSF----PASSAQYMAAPQLGSYGGPIIYPD--YAQHVFMPHPSPDPMGLVGPFPLQPMYFRNFDAILYNKILTQVEYYFSADNLSRDEHLRDQMNDEGWVPVRVIAAFRRLAELTNNIQTILEALRSSEVVEIQGETLRRRGDWDKYLLPREPSR-----SGPAAGASNNASLVSQIESMTLSE 446
BLAST of rna-XM_014648185.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q659C4|LAR1B_HUMAN (La-related protein 1B OS=Homo sapiens OX=9606 GN=LARP1B PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 2.226e-22 Identity = 55/131 (41.98%), Postives = 78/131 (59.54%), Query Frame = 0
Query: 349 GHQPIGPFANPMGFSEFYYYQPVTMDQFSGMPYFTPGPPLATFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKW 479
G + PF + S YYY D +G+ + E+ L I RQIEYYFS NL RD FLR KMDEQG++P++LIA F RV++LTTN+ LIL++++ ST VE++ +K+R+ + KW
Sbjct: 180 GERTDQPFQTELNTSMMYYY-----DDGTGVQVY----------PVEEALLKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKKIEPEKW 295
BLAST of rna-XM_014648185.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q940X9|LRP1A_ARATH (La-related protein 1A OS=Arabidopsis thaliana OX=3702 GN=LARP1A PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.338e-21 Identity = 49/117 (41.88%), Postives = 72/117 (61.54%), Query Frame = 0
Query: 380 PYFTP-----GPPLATFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSSKTRSESTST 491
P F P GPP+ +S + L + +L+Q+EYYFSD NL D +L S MDE+GWVP +IA F RVK++T +V I+ ++ S VEV GD++R+ + W W+ + +S S T
Sbjct: 257 PRFAPYPVNQGPPI---LSPEKLDLRDRVLKQVEYYFSDENLENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNSVEVQGDQIRKRDKWSDWIPASKKSTSAET 370
BLAST of rna-XM_014648185.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q6PKG0|LARP1_HUMAN (La-related protein 1 OS=Homo sapiens OX=9606 GN=LARP1 PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.497e-20 Identity = 49/125 (39.20%), Postives = 73/125 (58.40%), Query Frame = 0
Query: 356 FANPMGFSEFYYYQ-PVTMDQFSGMPYFTPGPPLATFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKW 479
F G+ +F + P T + + Y+ S + L + I RQIEYYFS NL RD FLR KMD G++P+TLIA F RV++LTT++ LI +++ S +VE++ +K+RR + KW
Sbjct: 359 FDYQFGYRKFDGVEGPRTPKYMNNITYYFDNVSSTELYSVDQELLKDYIKRQIEYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEIVDEKVRRREEPEKW 483
BLAST of rna-XM_014648185.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q6ZQ58|LARP1_MOUSE (La-related protein 1 OS=Mus musculus OX=10090 GN=Larp1 PE=1 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 8.586e-20 Identity = 49/125 (39.20%), Postives = 73/125 (58.40%), Query Frame = 0
Query: 356 FANPMGFSEFYYYQ-PVTMDQFSGMPYFTPGPPLATFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKW 479
F G+ +F + P T + + Y+ S + L + I RQIEYYFS NL RD FLR KMD G++P+TLIA F RV++LTT++ LI +++ S +VE++ +K+RR + KW
Sbjct: 334 FDYQFGYRKFDGTEGPRTHKYMNNITYYFDNVSSNEIYSMDQELLKDYIKRQIEYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEMVEEKVRRREEPEKW 458
BLAST of rna-XM_014648185.2 vs. UniProtKB/Swiss-Prot
Match: sp|D5MCN2|LARP1_CAEEL (La-related protein 1 OS=Caenorhabditis elegans OX=6239 GN=larp-1 PE=4 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 5.667e-16 Identity = 38/77 (49.35%), Postives = 55/77 (71.43%), Query Frame = 0
Query: 395 TESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLR 471
T+ L + +QIEYYFS+ NL +D FLR KM +G++PV LIA FPRV+SLT + LIL++++ ST V++ D L+
Sbjct: 575 TDDTLKEYVRKQIEYYFSEENLQKDFFLRRKMGPEGYLPVALIASFPRVRSLTEDYSLILEALKDSTKVDMSPDGLQ 651
BLAST of rna-XM_014648185.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9VAW5|LARP_DROME (La-related protein 1 OS=Drosophila melanogaster OX=7227 GN=larp PE=1 SV=5) HSP 1 Score: 83.1889 bits (204), Expect = 2.770e-15 Identity = 42/95 (44.21%), Postives = 62/95 (65.26%), Query Frame = 0
Query: 378 GMPYFTPGPPLATFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVL-GDKLR 471
G YF P A +I +++ I +Q+EYYFS NL D FLR KMD +G++PVTLIA F RV +LTT+V +I+++++ S +E+ G K+R
Sbjct: 710 GTHYFGNVP--AAYIELDANSIKEAIKKQVEYYFSVDNLTGDFFLRRKMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKESDKLELFEGYKVR 802
BLAST of rna-XM_014648185.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9P6K0|YLA3_SCHPO (Uncharacterized HTH La-type RNA-binding protein C1527.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC1527.03 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.718e-14 Identity = 33/86 (38.37%), Postives = 52/86 (60.47%), Query Frame = 0
Query: 402 MILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGD-------KLRRHNDWMKWL 480
+ Q+EYYFS NL +D FLR MD++G+VP+ +A F R+KS +T++ L+ + + S I++V D K+RR W W+
Sbjct: 328 FLTSQLEYYFSIENLCKDMFLRKHMDDEGYVPLAFLASFNRIKSFSTDLNLLHAACKASDIIDVAIDLQSPMSIKVRRKETWSPWI 413
BLAST of rna-XM_014648185.2 vs. UniProtKB/Swiss-Prot
Match: sp|J9VT60|LARP1_CRYNH (La RNA-binding domain-containing protein LHP1 OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) OX=235443 GN=LHP1 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.311e-14 Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 0
Query: 399 LSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLR 471
L +L Q+EYYFS NL D FLR +MD +GW+ + +IA F R+KSLT ++ + M S +EV DK+R
Sbjct: 712 LRFYVLGQVEYYFSMQNLAMDFFLRQQMDSEGWIDIAMIASFNRIKSLTPETSIVRECMILSNYLEVREDKVR 784
BLAST of rna-XM_014648185.2 vs. Araport11
Match: AT4G35890.1 (| winged-helix DNA-binding transcription factor family protein | Chr4:16997433-17000410 FORWARD LENGTH=523 | 201606) HSP 1 Score: 149.443 bits (376), Expect = 7.139e-39 Identity = 154/511 (30.14%), Postives = 229/511 (44.81%), Query Frame = 0
Query: 11 HSSSTASRPADANSPKFPRKNLPSPWAQVVRGGELESVPGINQSPPSVPGINQSPP--------STSSSTSSLITDQAPSSDCSPKVIPSSSPAMDNSNTVGVADSSDDAEDNADRSKKPVWNKPSNGVVVETGPVMGAESWPSLSASTKGSVKLPAESSSKTVAD---GSLSTSQVPMT-----SQAPQKQSNTNVNANPGTNYNVPGRQRSMK-RVGGSGIVSGPSQSNFSNPPPPPPPPPFPVYHLPPPVSYGMVTVVP--EPAPRDHYRNGNWDPRSMMRGFVPGMNEYRGSSHRNYFGHNS--------RGDGSYHNSYGSRHDQDRRNYG-------NTRDTFVPQPRMPPRGLLRHPPPSPA---AFVGHQPI---GPFANPMGFSEFYYYQPVTMDQFSGMPYFTPGPPLATFISATESALSNMIL-RQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWL 480
H S TAS A SP+ P + + SPW Q+VRG ES P + + P QS S ++ T++++T +A + D + S G +DNA KKPVW +PSNG E GPVMGA SWP+LS +TK + S K++ D S ++S VP+T + P + N NP N++ RQRS K R G SG +G + P + G T +P P+PR G N+ G + +N+ G + +G++H S+G R +Q+ N N R+ R P +RHP P+ F+ QP PF + S +Y MPY TP P F + +M L +QI+YYFSD NL+ D +LR M+ +G+VP+ ++A F +V LT N+Q I+++++ S VEV GD +R+ ++W W+
Sbjct: 23 HGSPTASV---AQSPRRPSRQVSSPWTQIVRG---ESEPIAAAAAVAGPSSPQSRAPIEPIASVSVAAPTAAVLTVEAAAGD-------------EKSEASG-------GQDNA--GKKPVWKRPSNGAS-EVGPVMGASSWPALSETTKAPSNKSSSDSLKSLGDVPSSSSASSSVPVTQGIANASVPAPKQAGRANPNPTPNHS---RQRSFKQRNGASGSANGT---------------------VSQPSAQGSFTELPSHNPSPR-------------------GQNQKNGFASQNHGGTENPSQRDSYRNQNGNHHQSHGGRRNQEHGNQNWTFQRSFNGREGNAQSQRGTP-AFVRHPSPTVQPIPQFMAAQPFPSHIPFPTELAQSSYYPR----------MPYMTPIPHGPQFFYHYQDPPLHMKLHKQIQYYFSDENLITDIYLRGFMNNEGFVPLRVVAGFKKVAELTDNIQQIVEALQNSPHVEVQGDFIRKRDNWQNWV 450
BLAST of rna-XM_014648185.2 vs. Araport11
Match: AT5G66100.1 (| winged-helix DNA-binding transcription factor family protein | Chr5:26427639-26429772 FORWARD LENGTH=453 | 201606) HSP 1 Score: 122.094 bits (305), Expect = 1.140e-29 Identity = 86/233 (36.91%), Postives = 119/233 (51.07%), Query Frame = 0
Query: 286 GSSHRNYFGHNSRGDGSYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQFSGMPYFTPGP-PLA-TFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSSKTRSESTSTSSSPRGSRSNN--LTANFQAITLEE 514
G SHRNY G + H Q +R G R PQ M P P S A ++ +G + P+ + + Y Q V M S P GP PL + ++ L N IL Q+EYYFS NL RDE LR +M+++GWVPV +IA F R+ LT N+Q IL+++R+S +VE+ G+ LRR DW K+L + S S P SNN L + +++TL E
Sbjct: 243 GFSHRNYSGRD-------------MHLQPQRGVGMIR----PQMLMGPPSF----PASSAQYMAAPQLGSYGGPIIYPD--YAQHVFMPHPSPDPMGLVGPFPLQPMYFRNFDAILYNKILTQVEYYFSADNLSRDEHLRDQMNDEGWVPVRVIAAFRRLAELTNNIQTILEALRSSEVVEIQGETLRRRGDWDKYLLPREPSR-----SGPAAGASNNASLVSQIESMTLSE 447
BLAST of rna-XM_014648185.2 vs. Araport11
Match: AT4G35890.2 (| winged-helix DNA-binding transcription factor family protein | Chr4:16997433-16999329 FORWARD LENGTH=414 | 201606) HSP 1 Score: 111.694 bits (278), Expect = 2.830e-26 Identity = 140/474 (29.54%), Postives = 204/474 (43.04%), Query Frame = 0
Query: 11 HSSSTASRPADANSPKFPRKNLPSPWAQVVRGGELESVPGINQSPPSVPGINQSPP--------STSSSTSSLITDQAPSSDCSPKVIPSSSPAMDNSNTVGVADSSDDAEDNADRSKKPVWNKPSNGVVVETGPVMGAESWPSLSASTKGSVKLPAESSSKTVAD---GSLSTSQVPMT-----SQAPQKQSNTNVNANPGTNYNVPGRQRSMK-RVGGSGIVSGPSQSNFSNPPPPPPPPPFPVYHLPPPVSYGMVTVVP--EPAPRDHYRNGNWDPRSMMRGFVPGMNEYRGSSHRNYFGHNS--------RGDGSYHNSYGSRHDQDRRNYG-------NTRDTFVPQPRMPPRGLLRHPPPSPA---AFVGHQPIG---PFANPMGFSEFYYYQPVTMDQFSGMPYFTPGPPLATFISATESALSNMIL-RQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRV 443
H S TAS A SP+ P + + SPW Q+VRG ES P + + P QS S ++ T++++T +A + D + S G +DNA KKPVW +PSNG E GPVMGA SWP+LS +TK + S K++ D S ++S VP+T + P + N NP N++ RQRS K R G SG +G + P + G T +P P+PR G N+ G + +N+ G + +G++H S+G R +Q+ N N R+ R P +RHP P+ F+ QP PF + S +Y MPY TP P F + +M L +QI+YYFSD NL+ D +LR M+ +G+VP+ ++A F +V
Sbjct: 23 HGSPTAS---VAQSPRRPSRQVSSPWTQIVRG---ESEPIAAAAAVAGPSSPQSRAPIEPIASVSVAAPTAAVLTVEAAAGD-------------EKSEASG-------GQDNA--GKKPVWKRPSNGAS-EVGPVMGASSWPALSETTKAPSNKSSSDSLKSLGDVPSSSSASSSVPVTQGIANASVPAPKQAGRANPNPTPNHS---RQRSFKQRNGASGSANGT---------------------VSQPSAQGSFTELPSHNPSPR-------------------GQNQKNGFASQNHGGTENPSQRDSYRNQNGNHHQSHGGRRNQEHGNQNWTFQRSFNGREGNAQSQRGTP-AFVRHPSPTVQPIPQFMAAQPFPSHIPFPTELAQSSYY----------PRMPYMTPIPHGPQFFYHYQDPPLHMKLHKQIQYYFSDENLITDIYLRGFMNNEGFVPLRVVAGFKKV 413
BLAST of rna-XM_014648185.2 vs. Araport11
Match: AT5G21160.1 (| LA RNA-binding protein | Chr5:7199191-7203879 REVERSE LENGTH=826 | 201606) HSP 1 Score: 102.449 bits (254), Expect = 1.369e-22 Identity = 49/117 (41.88%), Postives = 72/117 (61.54%), Query Frame = 0
Query: 380 PYFTP-----GPPLATFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSSKTRSESTST 491
P F P GPP+ +S + L + +L+Q+EYYFSD NL D +L S MDE+GWVP +IA F RVK++T +V I+ ++ S VEV GD++R+ + W W+ + +S S T
Sbjct: 257 PRFAPYPVNQGPPI---LSPEKLDLRDRVLKQVEYYFSDENLENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNSVEVQGDQIRKRDKWSDWIPASKKSTSAET 370
BLAST of rna-XM_014648185.2 vs. Araport11
Match: AT5G21160.2 (| LA RNA-binding protein | Chr5:7198817-7203879 REVERSE LENGTH=832 | 201606) HSP 1 Score: 102.449 bits (254), Expect = 1.505e-22 Identity = 49/117 (41.88%), Postives = 72/117 (61.54%), Query Frame = 0
Query: 380 PYFTP-----GPPLATFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSSKTRSESTST 491
P F P GPP+ +S + L + +L+Q+EYYFSD NL D +L S MDE+GWVP +IA F RVK++T +V I+ ++ S VEV GD++R+ + W W+ + +S S T
Sbjct: 257 PRFAPYPVNQGPPI---LSPEKLDLRDRVLKQVEYYFSDENLENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNSVEVQGDQIRKRDKWSDWIPASKKSTSAET 370
BLAST of rna-XM_014648185.2 vs. Araport11
Match: AT5G21160.3 (| LA RNA-binding protein | Chr5:7198817-7203879 REVERSE LENGTH=833 | 201606) HSP 1 Score: 102.449 bits (254), Expect = 1.506e-22 Identity = 49/117 (41.88%), Postives = 72/117 (61.54%), Query Frame = 0
Query: 380 PYFTP-----GPPLATFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSSKTRSESTST 491
P F P GPP+ +S + L + +L+Q+EYYFSD NL D +L S MDE+GWVP +IA F RVK++T +V I+ ++ S VEV GD++R+ + W W+ + +S S T
Sbjct: 257 PRFAPYPVNQGPPI---LSPEKLDLRDRVLKQVEYYFSDENLENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNSVEVQGDQIRKRDKWSDWIPASKKSTSAET 370
BLAST of rna-XM_014648185.2 vs. Araport11
Match: AT5G46250.1 (| RNA-binding protein | Chr5:18755388-18758056 FORWARD LENGTH=422 | 201606) HSP 1 Score: 65.855 bits (159), Expect = 3.400e-11 Identity = 32/78 (41.03%), Postives = 54/78 (69.23%), Query Frame = 0
Query: 399 LSNMILRQIEYYFSDANLVRDEFLRSKM--DEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGD--KLRR 472
L+ I+RQ+EYYFSD NL D+FL + M +++G+VP++ IA F ++K LT + LI+ +++ S+ + V D K++R
Sbjct: 103 LNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLVVSADEKKVKR 180
BLAST of rna-XM_014648185.2 vs. Araport11
Match: AT5G46250.2 (| RNA-binding protein | Chr5:18755388-18757723 FORWARD LENGTH=340 | 201606) HSP 1 Score: 64.3142 bits (155), Expect = 7.499e-11 Identity = 32/78 (41.03%), Postives = 54/78 (69.23%), Query Frame = 0
Query: 399 LSNMILRQIEYYFSDANLVRDEFLRSKM--DEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGD--KLRR 472
L+ I+RQ+EYYFSD NL D+FL + M +++G+VP++ IA F ++K LT + LI+ +++ S+ + V D K++R
Sbjct: 103 LNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLVVSADEKKVKR 180
BLAST of rna-XM_014648185.2 vs. Araport11
Match: AT5G46250.3 (| RNA-binding protein | Chr5:18755388-18757723 FORWARD LENGTH=340 | 201606) HSP 1 Score: 63.929 bits (154), Expect = 8.820e-11 Identity = 32/78 (41.03%), Postives = 54/78 (69.23%), Query Frame = 0
Query: 399 LSNMILRQIEYYFSDANLVRDEFLRSKM--DEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGD--KLRR 472
L+ I+RQ+EYYFSD NL D+FL + M +++G+VP++ IA F ++K LT + LI+ +++ S+ + V D K++R
Sbjct: 103 LNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLVVSADEKKVKR 180
BLAST of rna-XM_014648185.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UCB9|A0A1S3UCB9_VIGRR (la-related protein 1B OS=Vigna radiata var. radiata OX=3916 GN=LOC106763993 PE=4 SV=1) HSP 1 Score: 1082.78 bits (2799), Expect = 0.000e+0 Identity = 534/534 (100.00%), Postives = 534/534 (100.00%), Query Frame = 0
Query: 1 MVTTAKSPNHHSSSTASRPADANSPKFPRKNLPSPWAQVVRGGELESVPGINQSPPSVPGINQSPPSTSSSTSSLITDQAPSSDCSPKVIPSSSPAMDNSNTVGVADSSDDAEDNADRSKKPVWNKPSNGVVVETGPVMGAESWPSLSASTKGSVKLPAESSSKTVADGSLSTSQVPMTSQAPQKQSNTNVNANPGTNYNVPGRQRSMKRVGGSGIVSGPSQSNFSNPPPPPPPPPFPVYHLPPPVSYGMVTVVPEPAPRDHYRNGNWDPRSMMRGFVPGMNEYRGSSHRNYFGHNSRGDGSYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQFSGMPYFTPGPPLATFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSSKTRSESTSTSSSPRGSRSNNLTANFQAITLEETAESCSLPQLSNGGATGSST 534
MVTTAKSPNHHSSSTASRPADANSPKFPRKNLPSPWAQVVRGGELESVPGINQSPPSVPGINQSPPSTSSSTSSLITDQAPSSDCSPKVIPSSSPAMDNSNTVGVADSSDDAEDNADRSKKPVWNKPSNGVVVETGPVMGAESWPSLSASTKGSVKLPAESSSKTVADGSLSTSQVPMTSQAPQKQSNTNVNANPGTNYNVPGRQRSMKRVGGSGIVSGPSQSNFSNPPPPPPPPPFPVYHLPPPVSYGMVTVVPEPAPRDHYRNGNWDPRSMMRGFVPGMNEYRGSSHRNYFGHNSRGDGSYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQFSGMPYFTPGPPLATFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSSKTRSESTSTSSSPRGSRSNNLTANFQAITLEETAESCSLPQLSNGGATGSST
Sbjct: 1 MVTTAKSPNHHSSSTASRPADANSPKFPRKNLPSPWAQVVRGGELESVPGINQSPPSVPGINQSPPSTSSSTSSLITDQAPSSDCSPKVIPSSSPAMDNSNTVGVADSSDDAEDNADRSKKPVWNKPSNGVVVETGPVMGAESWPSLSASTKGSVKLPAESSSKTVADGSLSTSQVPMTSQAPQKQSNTNVNANPGTNYNVPGRQRSMKRVGGSGIVSGPSQSNFSNPPPPPPPPPFPVYHLPPPVSYGMVTVVPEPAPRDHYRNGNWDPRSMMRGFVPGMNEYRGSSHRNYFGHNSRGDGSYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQFSGMPYFTPGPPLATFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSSKTRSESTSTSSSPRGSRSNNLTANFQAITLEETAESCSLPQLSNGGATGSST 534
BLAST of rna-XM_014648185.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RQI4|A0A0S3RQI4_PHAAN (HTH La-type RNA-binding domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G294000 PE=4 SV=1) HSP 1 Score: 855.514 bits (2209), Expect = 0.000e+0 Identity = 479/537 (89.20%), Postives = 489/537 (91.06%), Query Frame = 0
Query: 1 MVTTAKS---PNHHSSSTASRPADANSPKFPRKNLPSPWAQVVRGGELESVPGINQSPPSVPGINQSPPSTSSSTSSLITDQAPSSDCSPKVIPSSSPAMDNSNTVGVADSSDDAEDNADRSKKPVWNKPSNGVVVETGPVMGAESWPSLSASTKGSVKLPAESSSKTVADGSLSTSQVPMTSQAPQKQSNTNVNANPGTNYNVPGRQRSMKRVGGSGIVSGPSQSNFSNPPPPPPPPPFPVYHLPPPVSYGMVTVVPEPAPRDHYRNGNWDPRSMMRGFVPGMNEYRGSSHRNYFGHNSRGDGSYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQFSGMPYFTPGPPLATFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSSKTRSESTSTSSSPRGSRSNNLTANFQAITLEETAESCSLPQLSNGGATGSST 534
MVTT KS PNHHSS+ + +DANSPKFPRKNLPSPWAQVVRGGE ES PGI+QSPPS TSSSTSSLITDQA SSDCSPKVIP S PAMDNSNTVGVADSSDDAEDNADRSKKPVWNKPSNGVVVETGPVMGAESWPSLSASTKGS KLPAESSSKTVADGSLSTSQ PMTSQAPQK SNTN ANP TNYNVP RQRSMKR+GG GIVSGPSQSNFSNPPPPPPPPPFPVYHLPP VSYGMV VVPEPA RDHYRN NWDPR+M+ GFVPGMNEY GSSHR+YFGHN RGDGSYHNSYGSRHDQDRRNYGN RDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQF+GMPYFTP P TF A +SALSNMI RQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSSKTRS STSTSSSPRGSRSNNLTANFQAITLEETAESCSLPQLSNGGATGSST
Sbjct: 1 MVTTTKSLNHPNHHSSAPSQMQSDANSPKFPRKNLPSPWAQVVRGGESESGPGIHQSPPS----------TSSSTSSLITDQALSSDCSPKVIPPS-PAMDNSNTVGVADSSDDAEDNADRSKKPVWNKPSNGVVVETGPVMGAESWPSLSASTKGSAKLPAESSSKTVADGSLSTSQAPMTSQAPQKPSNTNPKANPATNYNVPVRQRSMKRLGGGGIVSGPSQSNFSNPPPPPPPPPFPVYHLPP-VSYGMVPVVPEPASRDHYRNSNWDPRAMVGGFVPGMNEYLGSSHRSYFGHNPRGDGSYHNSYGSRHDQDRRNYGNNRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQFTGMPYFTPSPSPTTFFPAADSALSNMIQRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSSKTRSGSTSTSSSPRGSRSNNLTANFQAITLEETAESCSLPQLSNGGATGSST 525
BLAST of rna-XM_014648185.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9V2I2|A0A0L9V2I2_PHAAN (HTH La-type RNA-binding domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan07g276600 PE=4 SV=1) HSP 1 Score: 855.514 bits (2209), Expect = 0.000e+0 Identity = 479/537 (89.20%), Postives = 489/537 (91.06%), Query Frame = 0
Query: 1 MVTTAKS---PNHHSSSTASRPADANSPKFPRKNLPSPWAQVVRGGELESVPGINQSPPSVPGINQSPPSTSSSTSSLITDQAPSSDCSPKVIPSSSPAMDNSNTVGVADSSDDAEDNADRSKKPVWNKPSNGVVVETGPVMGAESWPSLSASTKGSVKLPAESSSKTVADGSLSTSQVPMTSQAPQKQSNTNVNANPGTNYNVPGRQRSMKRVGGSGIVSGPSQSNFSNPPPPPPPPPFPVYHLPPPVSYGMVTVVPEPAPRDHYRNGNWDPRSMMRGFVPGMNEYRGSSHRNYFGHNSRGDGSYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQFSGMPYFTPGPPLATFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSSKTRSESTSTSSSPRGSRSNNLTANFQAITLEETAESCSLPQLSNGGATGSST 534
MVTT KS PNHHSS+ + +DANSPKFPRKNLPSPWAQVVRGGE ES PGI+QSPPS TSSSTSSLITDQA SSDCSPKVIP S PAMDNSNTVGVADSSDDAEDNADRSKKPVWNKPSNGVVVETGPVMGAESWPSLSASTKGS KLPAESSSKTVADGSLSTSQ PMTSQAPQK SNTN ANP TNYNVP RQRSMKR+GG GIVSGPSQSNFSNPPPPPPPPPFPVYHLPP VSYGMV VVPEPA RDHYRN NWDPR+M+ GFVPGMNEY GSSHR+YFGHN RGDGSYHNSYGSRHDQDRRNYGN RDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQF+GMPYFTP P TF A +SALSNMI RQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSSKTRS STSTSSSPRGSRSNNLTANFQAITLEETAESCSLPQLSNGGATGSST
Sbjct: 1 MVTTTKSLNHPNHHSSAPSQMQSDANSPKFPRKNLPSPWAQVVRGGESESGPGIHQSPPS----------TSSSTSSLITDQALSSDCSPKVIPPS-PAMDNSNTVGVADSSDDAEDNADRSKKPVWNKPSNGVVVETGPVMGAESWPSLSASTKGSAKLPAESSSKTVADGSLSTSQAPMTSQAPQKPSNTNPKANPATNYNVPVRQRSMKRLGGGGIVSGPSQSNFSNPPPPPPPPPFPVYHLPP-VSYGMVPVVPEPASRDHYRNSNWDPRAMVGGFVPGMNEYLGSSHRSYFGHNPRGDGSYHNSYGSRHDQDRRNYGNNRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQFTGMPYFTPSPSPTTFFPAADSALSNMIQRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSSKTRSGSTSTSSSPRGSRSNNLTANFQAITLEETAESCSLPQLSNGGATGSST 525
BLAST of rna-XM_014648185.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3U973|A0A1S3U973_VIGRR (la-related protein 1C OS=Vigna radiata var. radiata OX=3916 GN=LOC106762955 PE=4 SV=1) HSP 1 Score: 810.061 bits (2091), Expect = 0.000e+0 Identity = 450/519 (86.71%), Postives = 466/519 (89.79%), Query Frame = 0
Query: 1 MVTTAKSPNHHSSSTA---SRPADANSPKFPRKNLPSPWAQVVRGGELESVPGINQSPPSVPGINQSPPSTSSSTSSLITDQAPSSDCSPKVIPSSSPAMDNSNTVGVADSSDDAEDNADRSKKPVWNKPSNGVVVETGPVMGAESWPSLSASTKGSVKLPAESSSKTVADGSLSTSQVPMTSQAPQKQSNTNVNANPGTNYNVPGRQRSMKRVGGSGIVSGPSQSNFSNPPPPPPPPPFPVYHLPPPVSYGMVTVVPEPAPRDHYRNGNWDPRSMMRGFVPGMNEYRGSSHRNYFGHNSRGDGSYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQFSGMPYFTPGPPLATFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSSK-TRSESTSTSSSPRGSRSNNLTANFQAITLEET 515
MVTTAKSP+HH+SSTA + DA+SPKFPRKN PSPWAQVVRGGE P S I+QSPPSTSSS+SSLITDQA SSDCSPKVI SS MDNSNTVGVAD+SD AEDNADRSKKPVWNKPSNGVV ETGPVMGAESWPSLSASTKGS KLPAESSSKTVADGSLSTSQVPMTSQ PQK SNTN ANP TNYN+P RQRSMKRVGGSGIVSGPSQSNFS+PPPPPPPPPFPVYHLPP VSYGMV VVPEPAPRDHYRN NWDPRSMM GFVPGMNEYRGSSHR+YFGHN RGDGSYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQF+GMPYFTP PP TF A +SALSNMI RQIEYYFSDANLVRD FLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHN+WM+W+SS TRS STST+SSPRGSR NNLT NFQAITLEET
Sbjct: 1 MVTTAKSPHHHTSSTAPEQLQSVDASSPKFPRKNFPSPWAQVVRGGE----------PESASVIHQSPPSTSSSSSSLITDQALSSDCSPKVIFLSS-QMDNSNTVGVADTSDVAEDNADRSKKPVWNKPSNGVV-ETGPVMGAESWPSLSASTKGSAKLPAESSSKTVADGSLSTSQVPMTSQTPQKPSNTNAKANPATNYNMPVRQRSMKRVGGSGIVSGPSQSNFSDPPPPPPPPPFPVYHLPP-VSYGMVPVVPEPAPRDHYRNSNWDPRSMMGGFVPGMNEYRGSSHRSYFGHNPRGDGSYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQFTGMPYFTPSPPPTTFFPAADSALSNMIQRQIEYYFSDANLVRDGFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNEWMRWVSSAITRSGSTSTASSPRGSRYNNLTTNFQAITLEET 506
BLAST of rna-XM_014648185.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MEH1|A0A4D6MEH1_VIGUN (Lupus La protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG7g15 PE=4 SV=1) HSP 1 Score: 803.127 bits (2073), Expect = 0.000e+0 Identity = 450/519 (86.71%), Postives = 465/519 (89.60%), Query Frame = 0
Query: 1 MVTTAKSPNHHSSSTA---SRPADANSPKFPRKNLPSPWAQVVRGGELESVPGINQSPPSVPGINQSPPSTSSSTSSLITDQAPSSDCSPKVIPSSSPAMDNSNTVGVADSSDDAEDNADRSKKPVWNKPSNGVVVETGPVMGAESWPSLSASTKGSVKLPAESSSKTVADGSLSTSQVPMTSQAPQKQSNTNVNANPGTNYNVPGRQRSMKRVGGSGIVSGPSQSNFSNPPPPPPPPPFPVYHLPPPVSYGMVTVVPEPAPRDHYRNGNWDPRSMMRGFVPGMNEYRGSSHRNYFGHNSRGDGSYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQFSGMPYFTPGPPLATFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSS-KTRSESTSTSSSPRGSRSNNLTANFQAITLEET 515
MVTTAKSPNHHSSSTA + AD SPKFPRKNLPSPWAQVVRGGE P SVPGI QSPPSTSSS+SSLI DQ SSD PK+IP+S P MDNSNTV VADS D AEDNADRSKKPVWNKPSNGVV+ETGPVMGAESWP+LSASTKGS KLPAESSSKTVADGSLSTSQ PMTSQAPQKQSNTN NP TNYNVP RQRSMKRVGGSGIVSGPSQSNFSNPPPPPPPPPFPVYHLPP VSYGMVTVVPEPAPRDHYRN NWDPR M+ GFVPGMNEYRGSSHR+YFGHN RGDGSYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPS AAFVG QPIGPFANPMGFSEFYYYQPVTMDQF+GMPYFTP PP TF SA +SALSNMI+RQIEYYFSDANLVRD FLRSKMDEQGWVPVTLIADFPRV+SLTTNVQLILDSMRTSTIVEV GDKLRRHN+WM+W+SS KTRS STSTSSSPRGSR NNLT NFQAITLEET
Sbjct: 1 MVTTAKSPNHHSSSTAPPQVQSADV-SPKFPRKNLPSPWAQVVRGGE----------PESVPGIYQSPPSTSSSSSSLIADQVFSSDSPPKIIPAS-PPMDNSNTVAVADSFDVAEDNADRSKKPVWNKPSNGVVLETGPVMGAESWPALSASTKGSAKLPAESSSKTVADGSLSTSQAPMTSQAPQKQSNTNAKTNPATNYNVPARQRSMKRVGGSGIVSGPSQSNFSNPPPPPPPPPFPVYHLPP-VSYGMVTVVPEPAPRDHYRNSNWDPRPMVGGFVPGMNEYRGSSHRSYFGHNPRGDGSYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSSAAFVGPQPIGPFANPMGFSEFYYYQPVTMDQFTGMPYFTPSPPPTTFFSAADSALSNMIVRQIEYYFSDANLVRDGFLRSKMDEQGWVPVTLIADFPRVRSLTTNVQLILDSMRTSTIVEVRGDKLRRHNEWMRWVSSAKTRSGSTSTSSSPRGSRYNNLTTNFQAITLEET 506
BLAST of rna-XM_014648185.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RQL5|A0A0S3RQL5_PHAAN (HTH La-type RNA-binding domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G293800 PE=4 SV=1) HSP 1 Score: 782.711 bits (2020), Expect = 0.000e+0 Identity = 437/516 (84.69%), Postives = 455/516 (88.18%), Query Frame = 0
Query: 1 MVTTAKSPNHHSSSTASRPADANSPKFPRKNLPSPWAQVVRGGELESVPGINQSPPSVPGINQSPPSTSSSTSSLITDQAPSSDCSPKVIPSSSPAMDNSNTVGVADSSDDAEDNADRSKKPVWNKPSNGVVVETGPVMGAESWPSLSASTKGSVKLPAESSSKTVADGSLSTSQVPMTSQAPQKQSNTNVNANPGTNYNVPGRQRSMKRVGGSGIVSGPSQSNFSNPPPPPPPPPFPVYHLPPPVSYGMVTVVPEPAPRDHYRNGNWDPRSMMRGFVPGMNEYRGSSHRNYFGHNSRGDGSYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQFSGMPYFTPGPPLATFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSSKTRSESTSTSSSPRGSRS-NNLTANFQAITLEET 515
MVTT KSP+HHSS + AD NSPKFPRKNLPSPWAQVVRGGELES PGI+QSPPS TSSS+SSLITDQA SSDCSPKV+P S P MDNSNTVGVAD+SD AEDNADRSKKPVWNKPSNGVV ETGPVMGAESWPSLSASTKGS KLPAESSS+TVADGSLSTSQVPMTSQAPQK SNTN ANP TNYNVP RQRSMKR+GG GIVSGPSQSNFSNPPPPPPPPPFPVYHLPP VSYGMV VVPEPA RDHYRN NWDPRSMM GFVPGMNEYRGSS R+YFGHN RGDGSYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQF+GMPYFTP PP TF A +SALSNMI RQIEYYFSDANLVRD FLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRR N+WM+W+SS ++++SS NNLT NFQAITLEET
Sbjct: 1 MVTTVKSPHHHSSPPQMQSADINSPKFPRKNLPSPWAQVVRGGELESAPGIHQSPPS----------TSSSSSSLITDQALSSDCSPKVVPPS-PQMDNSNTVGVADTSDVAEDNADRSKKPVWNKPSNGVV-ETGPVMGAESWPSLSASTKGSAKLPAESSSETVADGSLSTSQVPMTSQAPQKPSNTNPKANPATNYNVPVRQRSMKRLGGGGIVSGPSQSNFSNPPPPPPPPPFPVYHLPP-VSYGMVPVVPEPASRDHYRNSNWDPRSMMGGFVPGMNEYRGSSQRSYFGHNPRGDGSYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQFTGMPYFTPSPPPTTFFPAADSALSNMIQRQIEYYFSDANLVRDGFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRQNEWMRWVSSAITRSGSTSTSSSPRGSRYNNLTTNFQAITLEET 503
BLAST of rna-XM_014648185.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9V2V9|A0A0L9V2V9_PHAAN (HTH La-type RNA-binding domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan07g276800 PE=4 SV=1) HSP 1 Score: 782.711 bits (2020), Expect = 0.000e+0 Identity = 437/516 (84.69%), Postives = 455/516 (88.18%), Query Frame = 0
Query: 1 MVTTAKSPNHHSSSTASRPADANSPKFPRKNLPSPWAQVVRGGELESVPGINQSPPSVPGINQSPPSTSSSTSSLITDQAPSSDCSPKVIPSSSPAMDNSNTVGVADSSDDAEDNADRSKKPVWNKPSNGVVVETGPVMGAESWPSLSASTKGSVKLPAESSSKTVADGSLSTSQVPMTSQAPQKQSNTNVNANPGTNYNVPGRQRSMKRVGGSGIVSGPSQSNFSNPPPPPPPPPFPVYHLPPPVSYGMVTVVPEPAPRDHYRNGNWDPRSMMRGFVPGMNEYRGSSHRNYFGHNSRGDGSYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQFSGMPYFTPGPPLATFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSSKTRSESTSTSSSPRGSRS-NNLTANFQAITLEET 515
MVTT KSP+HHSS + AD NSPKFPRKNLPSPWAQVVRGGELES PGI+QSPPS TSSS+SSLITDQA SSDCSPKV+P S P MDNSNTVGVAD+SD AEDNADRSKKPVWNKPSNGVV ETGPVMGAESWPSLSASTKGS KLPAESSS+TVADGSLSTSQVPMTSQAPQK SNTN ANP TNYNVP RQRSMKR+GG GIVSGPSQSNFSNPPPPPPPPPFPVYHLPP VSYGMV VVPEPA RDHYRN NWDPRSMM GFVPGMNEYRGSS R+YFGHN RGDGSYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQF+GMPYFTP PP TF A +SALSNMI RQIEYYFSDANLVRD FLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRR N+WM+W+SS ++++SS NNLT NFQAITLEET
Sbjct: 1 MVTTVKSPHHHSSPPQMQSADINSPKFPRKNLPSPWAQVVRGGELESAPGIHQSPPS----------TSSSSSSLITDQALSSDCSPKVVPPS-PQMDNSNTVGVADTSDVAEDNADRSKKPVWNKPSNGVV-ETGPVMGAESWPSLSASTKGSAKLPAESSSETVADGSLSTSQVPMTSQAPQKPSNTNPKANPATNYNVPVRQRSMKRLGGGGIVSGPSQSNFSNPPPPPPPPPFPVYHLPP-VSYGMVPVVPEPASRDHYRNSNWDPRSMMGGFVPGMNEYRGSSQRSYFGHNPRGDGSYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQFTGMPYFTPSPPPTTFFPAADSALSNMIQRQIEYYFSDANLVRDGFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRQNEWMRWVSSAITRSGSTSTSSSPRGSRYNNLTTNFQAITLEET 503
BLAST of rna-XM_014648185.2 vs. UniProtKB/TrEMBL
Match: tr|V7CUR2|V7CUR2_PHAVU (HTH La-type RNA-binding domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G004100g PE=4 SV=1) HSP 1 Score: 749.969 bits (1935), Expect = 0.000e+0 Identity = 429/521 (82.34%), Postives = 451/521 (86.56%), Query Frame = 0
Query: 1 MVTTAKSPNHHSSSTASRPADANSPKFPRKNLPSPWAQVVRGGELESVPGINQSPPSVPGINQSPPSTSSSTSSLITDQAPSSDCSPKVIPSSSPAMDNSNTVGVADSSDDAEDNADRSKKPVWNKPSNGVVVETGPVMGAESWPSLSA-STKGSVKLPAESSSKTVADGSLSTSQVPMTSQAPQKQSNT-NVNANPGTNYNVPGRQRSMKRVGGSGIVSGPSQSNFSNPPPP-PPPPPFPVYHLPPPVSYGMVTVVPEPAPRDHYRNGNWDPRSMMRGFVPGMNEYRGSSHRNYFGHNSRGDG--SYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQFSGMPYFTPGPPLATFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWL-SSKTRSESTSTSSSPRGSRSNNLTANFQAITLEET 515
MVTTAKS NHHSSST P + P FP KNLPSPWAQVVRGG+ P S P I+QSPPSTSSS+SSLI D PSSDCSPKVIP+S P +DNSNTVGVADSSD AEDNADRSKKPVWNKPSNGVVVETGPVMGAESWP+LSA STK SVKLPAESSSKTVADGSLSTSQ P+ SQ+PQKQ+ T N N TNYNVPGRQRSMKRVGGSGIVSGPSQ NFSNPPPP PPPPPFPVYH+ PPVSYGMV VPEPAPRDHYRN NWD R MM FVPGMNEYRGSSHR YFG + RGDG SY N+YGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPP+ AAFVGHQPIGPFANPMGFSEFYYYQPVTM+QF+GMPYFTP PP T A ES LSN I+RQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRV+SLTTNVQ+ILDSMRTSTIVEVLGDKLRRHN+WMKW+ S+KTRS STSTSSSPRG R NNLTANFQAITLEET
Sbjct: 1 MVTTAKSSNHHSSSTPPSPLHPSDPNFPPKNLPSPWAQVVRGGD----------PESPPAIHQSPPSTSSSSSSLIADHPPSSDCSPKVIPAS-PPLDNSNTVGVADSSDGAEDNADRSKKPVWNKPSNGVVVETGPVMGAESWPALSAASTKASVKLPAESSSKTVADGSLSTSQGPVNSQSPQKQATTTNAKPNSATNYNVPGRQRSMKRVGGSGIVSGPSQGNFSNPPPPPPPPPPFPVYHI-PPVSYGMVPFVPEPAPRDHYRNSNWDHRPMMGAFVPGMNEYRGSSHRGYFGPHPRGDGSSSYRNTYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPNSAAFVGHQPIGPFANPMGFSEFYYYQPVTMEQFTGMPYFTPSPP-PTIFPAAESPLSNKIVRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVRSLTTNVQMILDSMRTSTIVEVLGDKLRRHNEWMKWVSSTKTRSGSTSTSSSPRGPRYNNLTANFQAITLEET 508
BLAST of rna-XM_014648185.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371EAT5|A0A371EAT5_MUCPR (La-related protein 1C (Fragment) OS=Mucuna pruriens OX=157652 GN=LARP1C PE=4 SV=1) HSP 1 Score: 648.662 bits (1672), Expect = 0.000e+0 Identity = 388/548 (70.80%), Postives = 432/548 (78.83%), Query Frame = 0
Query: 1 MVTTAKSPNHHSSSTA---SRPADANSPKFPRKNLPSPWAQVVRGGELESVPGINQSPPSVPGINQSPPSTSSSTSSLITDQAPSSDCSPKVIPSSSPAMDNSNTVGVA---DSSDDAEDNADRSKKPVWNKPSNGVVVETGPVMGAESWPSLSASTKGSVKLPAESSSKTVADGSLSTSQVPMTSQAPQKQSNTNVNANPGTNYNVPGRQRSMKRVGGSGIVSGPSQSNFSNPPPPPPPPPFPVYHLPPPVSYG-MVTVVPEPAPRDHYRNGNWDPRSMMRGFVPGMNEYRGSSHRNYFGHNSRGDGSYHNSYGSRHDQDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQFSGMPYFTPGPPLATFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSSKTRSESTSTSSSPRGSRSNNLTANFQAITLEET------AESCSLPQLSNGG-ATGSST 534
MVT KS NHHS S+A ++ + NSPKFPRKN PSPWAQVVRG E ES I+QSPPS +SSS+SSL DQ P S+C KV+ S+ P +++SNTVGV DSSD E N DRSKKPVWNKPSNGVVVETGPVMGAESWP+LS STK SVKLPAES+SK+VADGSLSTSQVPMT Q+PQKQ TN AN NYNVP R R+MKRVGGS I SGPSQSNFSNPPPPPPPPPFPVY L PPVSYG MV VP+PAPRDHYRN NWD R ++ GF+P MNEYRGSS R YFG + RGDGSYHNSYGSR DQDR NY NTRD + QPRMPPRGLLRHPPPS AAFV HQPIGPFANPMGFS+FYYYQPVT++Q GMP+FTP PP T+ SA ES LSNMI+ QIEYYFSDANLVRD+FLRSKMDEQGWVP+TLIADFPRV+SLT+N+QLILDS+R ST+VEV GDKLRRHN+WM+W+ S + + S S SP GSR NNL ANF+AITLEET ES QL NGG A G S+
Sbjct: 1 MVTAPKSSNHHSPSSAPSTAQHGEGNSPKFPRKNFPSPWAQVVRGSEQESAVSIHQSPPS----------SSSSSSSLAADQVPPSECFLKVV-SALPPVESSNTVGVVTVVDSSDGPEGNVDRSKKPVWNKPSNGVVVETGPVMGAESWPALSESTKASVKLPAESASKSVADGSLSTSQVPMTLQSPQKQVTTNAKANLAMNYNVPNRPRAMKRVGGSSIGSGPSQSNFSNPPPPPPPPPFPVYQL-PPVSYGNMVAGVPDPAPRDHYRNNNWDARPIVGGFMPAMNEYRGSSRRGYFGPHPRGDGSYHNSYGSRRDQDRGNYVNTRDAYAHQPRMPPRGLLRHPPPSTAAFVRHQPIGPFANPMGFSDFYYYQPVTVEQLPGMPFFTPSPPPTTYFSAAESPLSNMIVYQIEYYFSDANLVRDQFLRSKMDEQGWVPITLIADFPRVRSLTSNIQLILDSLRASTVVEVQGDKLRRHNEWMRWVPSALQ-RADSGSMSPGGSRYNNLAANFKAITLEETTKDEGPTESFIQSQLPNGGDAMGRSS 535
BLAST of rna-XM_014648185.2 vs. UniProtKB/TrEMBL
Match: tr|I1MC18|I1MC18_SOYBN (HTH La-type RNA-binding domain-containing protein OS=Glycine max OX=3847 GN=100785504 PE=4 SV=2) HSP 1 Score: 646.351 bits (1666), Expect = 0.000e+0 Identity = 390/541 (72.09%), Postives = 422/541 (78.00%), Query Frame = 0
Query: 1 MVTTAKSPNHHSSSTASRP---ADANSPKFPRKNLPSPWAQVVRGGELESVPGINQSPPSVPGINQSPPSTSSSTSSLITDQAPSSDCSPKVIPSSSPAMDNSNTVGVADSSDDAEDNADRSKKPVWNKPSNGVVV-ETGPVMGA-ESWPSLSASTKGSVKLPAESSSKTVAD-GSLSTSQVPMTSQAPQKQSNTNVNANPGTNYNVPGRQRSMKRVGGSGIVSGPSQSNFSNPPPPPPPPPFPVYHLPPPVSYG-MVTVVPEPAPRDHYRNGNWDPRSMMRGFVPGMNEYRGSSHRNYFGHNSRGDGSYHNSYGSRHD-QDRRNYGNTRDTFVPQPRMPPRGLLRHPPPSPAAFVGHQPIGPFANPMGFSEFYYYQPVTMDQFSGMPYFTPGPPLATFISATESALSNMILRQIEYYFSDANLVRDEFLRSKMDEQGWVPVTLIADFPRVKSLTTNVQLILDSMRTSTIVEVLGDKLRRHNDWMKWLSSKTRSESTSTSSSPRGSRSNNLTANFQAITLEETAESCSLPQLSNGGATGSS 533
MVT AKS NHHS +A P D NSPKFPRKNLPSPWAQVVRGGE ES GI+QSPPS S+SSS+SSL+ DQAPSS+ VIP SSP +DNSNTVG DSSD AE NAD SKKPVWNKPSNGVVV ETGPVMGA ESWP+L ASTKGS KLPAESSSKTV D GSLSTSQ PMTSQ+PQKQ+ T + NYNVP RQRSMKRVGGS SGPSQSNFSNPPP PPPPP + PPVSYG MV VP+ APRDHYRN NWD R ++ GFVP MNEYRGSS R YFG + RGDGSYHNSYGSR D QDR NY N RD F+PQPRMPPRGLLRHPPP+ AAFVG QPIGPFANP+ F EFYYYQPVT++QF+GMP+FT PP F SA ES LSNMI+ QIEYYFSDANLV+D FLRSKMDEQGWVPVTLIADFPRVK+LTTN+QLILDS+RTST+VEV GDKLRR N+WM+WL S R S S S SP GS NNLTANFQ I LEET S Q + G AT SS
Sbjct: 1 MVTAAKSSNHHSPPSAPSPAQPGDGNSPKFPRKNLPSPWAQVVRGGEPESAGGIHQSPPS---------SSSSSSSSLVADQAPSSE----VIPVSSP-VDNSNTVGDVDSSDGAEGNADCSKKPVWNKPSNGVVVVETGPVMGAAESWPTLLASTKGSAKLPAESSSKTVTDDGSLSTSQWPMTSQSPQKQATTIAKPSSAPNYNVPSRQRSMKRVGGSSTGSGPSQSNFSNPPPTPPPPPPFPVYQLPPVSYGNMVPGVPDHAPRDHYRNNNWDARPLVGGFVPAMNEYRGSSRRGYFGPHPRGDGSYHNSYGSRRDHQDRGNYVNARDAFLPQPRMPPRGLLRHPPPNTAAFVGPQPIGPFANPISFPEFYYYQPVTVEQFTGMPFFTHSPPPTPFFSAAESPLSNMIVYQIEYYFSDANLVKDAFLRSKMDEQGWVPVTLIADFPRVKNLTTNIQLILDSLRTSTVVEVQGDKLRRLNEWMRWLPSAQR-RSNSGSISPSGSTHNNLTANFQTIILEETTADESPTQPNGGDATKSS 526 The following BLAST results are available for this feature:
BLAST of rna-XM_014648185.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot) Total hits: 10
BLAST of rna-XM_014648185.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11) Total hits: 9
BLAST of rna-XM_014648185.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_014648185.2_VrVC1973A-SNU_v1 ID=rna-XM_014648185.2_VrVC1973A-SNU_v1; Name=rna-XM_014648185.2; organism=Vigna radiata; type=mRNA; length=1605bpback to top protein sequence of rna-XM_014648185.2_VrVC1973A-SNU_v1 >rna-XM_014648185.2_VrVC1973A-SNU_v1 ID=rna-XM_014648185.2_VrVC1973A-SNU_v1; Name=rna-XM_014648185.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=534bpback to top mRNA from alignment at chr06:36754302..36758167+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_014648185.2_VrVC1973A-SNU_v1 ID=rna-XM_014648185.2_VrVC1973A-SNU_v1; Name=rna-XM_014648185.2; organism=Vigna radiata; type=mRNA; length=3866bp; location=Sequence derived from: chr06:36754302..36758167+ (Vigna radiataback to top Coding sequence (CDS) from alignment at chr06:36754302..36758167+ >rna-XM_014648185.2_VrVC1973A-SNU_v1 ID=rna-XM_014648185.2_VrVC1973A-SNU_v1; Name=rna-XM_014648185.2; organism=Vigna radiata; type=CDS; length=1605bp; location=Sequence derived from: chr06:36754302..36758167+ (Vigna radiataback to top |