rna-XM_014648424.2

Transcript Overview
Namerna-XM_014648424.2
Unique Namerna-XM_014648424.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length819
Productprobable carbohydrate esterase At4g34215
References
External references for this mRNA
DatabaseAccession
GeneID106764185
GenbankXM_014648424.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr06chromosomechr06:34780726..34781942 +Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL056Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvrvL158Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0332Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvrvL347Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0513Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0651Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvrvL600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvrvL652Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0719Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0720Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0783Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL1103Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivrvL096Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivrvL541Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivrvL870Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL314Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL430Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL690Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crvrvL080Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccvrvL0889Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL352Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvrvL356Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccvrvL1036Cajanus cajan Asha genome v1.0Cajanus cajan
pvvrvL046Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL456Pisum sativum Cameor genome v1aPisum sativum
psvrvL525Pisum sativum Cameor genome v1aPisum sativum
pvvrvL232Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL532Pisum sativum Cameor genome v1aPisum sativum
pvvrvL327Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvrvL763Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL072Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL284Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL363Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvrvL054Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvrvL163Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvL076Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL296Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL377Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR563Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR591Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR612Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvzwsR458Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvzwsR464Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvzwsR467Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR388Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR423Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR402Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR501Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR438Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR405Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR448Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR431Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR459Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvrvL288Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL408Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL653Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL220Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL297Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL456Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL552Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL604Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL287Cicer arietinum
carvrvL421Cicer arietinum
carvrvL612Cicer arietinum
carvrvL666Cicer arietinum
ccavrvL169Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL457Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL521Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL589Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR447Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR449Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR455Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR465Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR473Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR530Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR531Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR564Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR445Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR447Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR459Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR467Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR503Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL066Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL120Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL238Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL302Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL578Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL039Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL218Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL305Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL524Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL711Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR397Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR422Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR433Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Cc_v2.0_15342.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigun09g235200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
LR48_mrnaVigan07g267800Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Psat05G0142300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Psat5g041440.1Pisum sativum Cameor genome v1aPisum sativum
LR48_mrnaVigan02g240700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-KK1_036284Cajanus cajan Asha genome v1.0Cajanus cajan
Vigst.02G039900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
XM_058866235.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigan.08G045700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
jg54974.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Ca_18352Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigst.03G169000.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vum_02G00411.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Tiffany.R1.3g181320.1Vicia faba cv. Tiffany genome v1.0Vicia faba
evm.model.Chr09.1403Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
evm.model.Chr08.466Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat06G0037400-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Cc_v2.0_10750.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Ca_01139.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vfaba.Hedin2.R1.3g221920.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_12410Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr07.365Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun07g256800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
PvulFLAVERTChr01.1000189Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigun08g027800.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Phvul.001G025101.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat6g014080.1Pisum sativum Cameor genome v1aPisum sativum
Vum_08G00380.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vum_03G01874.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigun08g027800.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Va07G067900.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun09g235200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigst.08G037200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-TanjilR_08212Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg35368.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Va02G068490.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigan.03G266400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
PvulFLAVERTChr07.248Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cr_09430.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106764185gene-LOC106764185_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014648424.2-1exon-XM_014648424.2-1_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014648424.2-2exon-XM_014648424.2-2_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014503910.1cds-XP_014503910.1_VrVC1973A-SNU_v1Vigna radiataCDS
cds-XP_014503910.1cds-XP_014503910.1_VrVC1973A-SNU_v1_2Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014648424.2_VrVC1973A-SNU_v1rna-XM_014648424.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014648424.2_VrVC1973A-SNU_v1rna-XM_014648424.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
BLAST of rna-XM_014648424.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q8L9J9|CAES_ARATH (Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana OX=3702 GN=At4g34215 PE=1 SV=2)

HSP 1 Score: 264.233 bits (674), Expect = 1.509e-87
Identity = 134/236 (56.78%), Postives = 168/236 (71.19%), Query Frame = 0
Query:   28 IFVLAGQSNMAGRGGVVGGK------WDGKVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEVRR---GGGGLVGLVPCAVGGTKIGEWSRGSRLYDELVKRAKRAMGL-GRIRGLLWYQGESDTVREKDSESYKDKMEKLIVDLRLDLELPSLLVIQVALASGEGKFVEKVRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQVHLGIKLAHAYLNS 253
            IF+L+GQSNMAGRGGV          WD  +P EC P+  + RLSA+L WEEA EPLH DID  K CGVGPGMAFAN V+        ++GLVPCA GGT I EW RGS LY+ +VKR + +    G I+ +LWYQGESD +   D+ESY + M++LI +LR DL LPSL +IQVA+ASG G +++KVR AQ+ +K++NV CVDAKGL L +D LHLTT AQV LG+ LA AYL++
Sbjct:   24 IFILSGQSNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLRWEEAHEPLHVDIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERGSHLYERMVKRTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPSLPIIQVAIASG-GGYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSLAQAYLSN 258          
BLAST of rna-XM_014648424.2 vs. Araport11
Match: AT4G34215.2 (| carbohydrate esterase%2C putative (DUF303) | Chr4:16380203-16381192 REVERSE LENGTH=260 | 201606)

HSP 1 Score: 264.233 bits (674), Expect = 1.544e-88
Identity = 134/236 (56.78%), Postives = 168/236 (71.19%), Query Frame = 0
Query:   28 IFVLAGQSNMAGRGGVVGGK------WDGKVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEVRR---GGGGLVGLVPCAVGGTKIGEWSRGSRLYDELVKRAKRAMGL-GRIRGLLWYQGESDTVREKDSESYKDKMEKLIVDLRLDLELPSLLVIQVALASGEGKFVEKVRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQVHLGIKLAHAYLNS 253
            IF+L+GQSNMAGRGGV          WD  +P EC P+  + RLSA+L WEEA EPLH DID  K CGVGPGMAFAN V+        ++GLVPCA GGT I EW RGS LY+ +VKR + +    G I+ +LWYQGESD +   D+ESY + M++LI +LR DL LPSL +IQVA+ASG G +++KVR AQ+ +K++NV CVDAKGL L +D LHLTT AQV LG+ LA AYL++
Sbjct:   24 IFILSGQSNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLRWEEAHEPLHVDIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERGSHLYERMVKRTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPSLPIIQVAIASG-GGYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSLAQAYLSN 258          
BLAST of rna-XM_014648424.2 vs. Araport11
Match: AT4G34215.1 (| carbohydrate esterase%2C putative (DUF303) | Chr4:16380203-16381192 REVERSE LENGTH=260 | 201606)

HSP 1 Score: 264.233 bits (674), Expect = 1.544e-88
Identity = 134/236 (56.78%), Postives = 168/236 (71.19%), Query Frame = 0
Query:   28 IFVLAGQSNMAGRGGVVGGK------WDGKVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEVRR---GGGGLVGLVPCAVGGTKIGEWSRGSRLYDELVKRAKRAMGL-GRIRGLLWYQGESDTVREKDSESYKDKMEKLIVDLRLDLELPSLLVIQVALASGEGKFVEKVRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQVHLGIKLAHAYLNS 253
            IF+L+GQSNMAGRGGV          WD  +P EC P+  + RLSA+L WEEA EPLH DID  K CGVGPGMAFAN V+        ++GLVPCA GGT I EW RGS LY+ +VKR + +    G I+ +LWYQGESD +   D+ESY + M++LI +LR DL LPSL +IQVA+ASG G +++KVR AQ+ +K++NV CVDAKGL L +D LHLTT AQV LG+ LA AYL++
Sbjct:   24 IFILSGQSNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLRWEEAHEPLHVDIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERGSHLYERMVKRTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPSLPIIQVAIASG-GGYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSLAQAYLSN 258          
BLAST of rna-XM_014648424.2 vs. Araport11
Match: AT3G53010.1 (| carbohydrate esterase%2C putative (DUF303) | Chr3:19656603-19657928 REVERSE LENGTH=297 | 201606)

HSP 1 Score: 259.996 bits (663), Expect = 2.270e-86
Identity = 130/242 (53.72%), Postives = 170/242 (70.25%), Query Frame = 0
Query:   21 SGAVSRDI--FVLAGQSNMAGRGGVVGGK------WDGKVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEVRRGGGGLVGLVPCAVGGTKIGEWSRGSRLYDELVKRAKRAM---GLGRIRGLLWYQGESDTVREKDSESYKDKMEKLIVDLRLDLELPSLLVIQVALASGEGKFVEKVRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQVHLGIKLAHAYL 251
            S  ++R+I  F+LAGQSNMAGRGGV          WDG +P EC  +P + RL+++LEW+EA+EPLH DID+ KT GVGPGM FAN V    G  VGLVPC++GGTK+ +W +G  LY+E VKRAK AM   G G  R +LWYQGESDTV   D+  YK ++ K   DLR DL+ P+L +IQVALA+G G +++ VR+AQ++  + NV CVDA+GL L  D LHLTT++QV LG  +A ++L
Sbjct:   22 SQTITRNISIFILAGQSNMAGRGGVYNDTATNTTVWDGVIPPECRSNPSILRLTSKLEWKEAKEPLHVDIDINKTNGVGPGMPFANRVVNRFGQ-VGLVPCSIGGTKLSQWQKGEFLYEETVKRAKAAMASGGGGSYRAVLWYQGESDTVDMVDASVYKKRLVKFFSDLRNDLQHPNLPIIQVALATGAGPYLDAVRKAQLKTDLENVYCVDARGLPLEPDGLHLTTSSQVQLGHMIAESFL 262          
BLAST of rna-XM_014648424.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UD00|A0A1S3UD00_VIGRR (probable carbohydrate esterase At4g34215 OS=Vigna radiata var. radiata OX=3916 GN=LOC106764185 PE=4 SV=1)

HSP 1 Score: 555.444 bits (1430), Expect = 0.000e+0
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0
Query:    1 MDLMCVLLGFMWVMEGVRGGSGAVSRDIFVLAGQSNMAGRGGVVGGKWDGKVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEVRRGGGGLVGLVPCAVGGTKIGEWSRGSRLYDELVKRAKRAMGLGRIRGLLWYQGESDTVREKDSESYKDKMEKLIVDLRLDLELPSLLVIQVALASGEGKFVEKVRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQVHLGIKLAHAYLNSTTYRNQIHHTQSYQPLRTS 272
            MDLMCVLLGFMWVMEGVRGGSGAVSRDIFVLAGQSNMAGRGGVVGGKWDGKVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEVRRGGGGLVGLVPCAVGGTKIGEWSRGSRLYDELVKRAKRAMGLGRIRGLLWYQGESDTVREKDSESYKDKMEKLIVDLRLDLELPSLLVIQVALASGEGKFVEKVRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQVHLGIKLAHAYLNSTTYRNQIHHTQSYQPLRTS
Sbjct:    1 MDLMCVLLGFMWVMEGVRGGSGAVSRDIFVLAGQSNMAGRGGVVGGKWDGKVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEVRRGGGGLVGLVPCAVGGTKIGEWSRGSRLYDELVKRAKRAMGLGRIRGLLWYQGESDTVREKDSESYKDKMEKLIVDLRLDLELPSLLVIQVALASGEGKFVEKVRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQVHLGIKLAHAYLNSTTYRNQIHHTQSYQPLRTS 272          
BLAST of rna-XM_014648424.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RPW3|A0A0S3RPW3_PHAAN (SASA domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G266400 PE=4 SV=1)

HSP 1 Score: 528.48 bits (1360), Expect = 0.000e+0
Identity = 259/268 (96.64%), Postives = 262/268 (97.76%), Query Frame = 0
Query:    1 MDLMCVLLGFMWVMEGVRGGSGAVSRDIFVLAGQSNMAGRGGVVGGKWDGKVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEVRRGGGGLVGLVPCAVGGTKIGEWSRGSRLYDELVKRAKRAMGLGRIRGLLWYQGESDTVREKDSESYKDKMEKLIVDLRLDLELPSLLVIQVALASGEGKFVEKVRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQVHLGIKLAHAYLNSTTYRNQIHHTQSYQP 268
            ++LMCVLLGFMWVMEGVRGG GAVSRDIFVLAGQSNMAGRGGVVGGKWDGKVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEV RGGGG VGLVPCAVGGTKIGEWSRGSRLYDELVKR KRAMGLGRIRGLLWYQGESDTVREKDSESYKDKME+LIVDLRLDLELPSLLVIQVALASGEGKFVE VRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQVHLGIKLAHAYLNSTTYRNQIH TQSYQP
Sbjct:    3 LNLMCVLLGFMWVMEGVRGGLGAVSRDIFVLAGQSNMAGRGGVVGGKWDGKVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEVLRGGGGPVGLVPCAVGGTKIGEWSRGSRLYDELVKRVKRAMGLGRIRGLLWYQGESDTVREKDSESYKDKMERLIVDLRLDLELPSLLVIQVALASGEGKFVENVRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQVHLGIKLAHAYLNSTTYRNQIHPTQSYQP 270          
BLAST of rna-XM_014648424.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MCA3|A0A4D6MCA3_VIGUN (Iduronate 2-sulfatase OS=Vigna unguiculata OX=3917 GN=DEO72_LG7g284 PE=4 SV=1)

HSP 1 Score: 479.174 bits (1232), Expect = 9.028e-170
Identity = 236/256 (92.19%), Postives = 244/256 (95.31%), Query Frame = 0
Query:   14 MEGVRGGSGAVSRDIFVLAGQSNMAGRGGVVGGKWDGKVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEVRRG-GGGLVGLVPCAVGGTKIGEWSRGSRLYDELVKRAKRAMGLGRIRGLLWYQGESDTVREKDSESYKDKMEKLIVDLRLDLELPSLLVIQVALASGEGKFVEKVRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQVHLGIKLAHAYLNSTTYRNQIHHTQSYQP 268
            MEGVRGG GAVSRDIFVLAGQSNMAGRGGVVGGKWDGKVPAECGPSPW+WRLSA LEWEEAREPLHADIDVTKTCGVGPGMAFANEV R  GGG+VGLVPCAVGGTKIGEWSRGSRLYDELVKRAKRAMGLGRIRGLLWYQGESDTVREKDSESYKDKMEKLI+DLR DL LPSLLVIQVALASGEGKF+EKVRRAQME++M NV+CVDAKGLSL ADKLHLTT  QVHLGIKLAHAYLNSTTY NQI+HTQSYQP
Sbjct:    1 MEGVRGGLGAVSRDIFVLAGQSNMAGRGGVVGGKWDGKVPAECGPSPWIWRLSAGLEWEEAREPLHADIDVTKTCGVGPGMAFANEVLRARGGGVVGLVPCAVGGTKIGEWSRGSRLYDELVKRAKRAMGLGRIRGLLWYQGESDTVREKDSESYKDKMEKLILDLRSDLHLPSLLVIQVALASGEGKFIEKVRRAQMEIRMDNVKCVDAKGLSLKADKLHLTTMGQVHLGIKLAHAYLNSTTYHNQINHTQSYQP 256          
BLAST of rna-XM_014648424.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9V2M3|A0A0L9V2M3_PHAAN (SASA domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan07g267800 PE=4 SV=1)

HSP 1 Score: 461.84 bits (1187), Expect = 2.505e-163
Identity = 226/232 (97.41%), Postives = 227/232 (97.84%), Query Frame = 0
Query:   37 MAGRGGVVGGKWDGKVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEVRRGGGGLVGLVPCAVGGTKIGEWSRGSRLYDELVKRAKRAMGLGRIRGLLWYQGESDTVREKDSESYKDKMEKLIVDLRLDLELPSLLVIQVALASGEGKFVEKVRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQVHLGIKLAHAYLNSTTYRNQIHHTQSYQP 268
            MAGRGGVVGGKWDGKVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEV RGGGG VGLVPCAVGGTKIGEWSRGSRLYDELVKR KRAMGLGRIRGLLWYQGESDTVREKDSESYKDKME+LIVDLRLDLELPSLLVIQVALASGEGKFVE VRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQVHLGIKLAHAYLNSTTYRNQIH TQSYQP
Sbjct:    1 MAGRGGVVGGKWDGKVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEVLRGGGGPVGLVPCAVGGTKIGEWSRGSRLYDELVKRVKRAMGLGRIRGLLWYQGESDTVREKDSESYKDKMERLIVDLRLDLELPSLLVIQVALASGEGKFVENVRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQVHLGIKLAHAYLNSTTYRNQIHPTQSYQP 232          
BLAST of rna-XM_014648424.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445H3I4|A0A445H3I4_GLYSO (Putative carbohydrate esterase isoform A OS=Glycine soja OX=3848 GN=D0Y65_038085 PE=4 SV=1)

HSP 1 Score: 399.438 bits (1025), Expect = 4.085e-138
Identity = 203/272 (74.63%), Postives = 228/272 (83.82%), Query Frame = 0
Query:    1 MDLMCVLLGFMWVME-GVRGGSGAVSRDIFVLAGQSNMAGRGGVVGGKWDGKVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEV--RRGGGGLVGLVPCAVGGTKIGEWSRGSRLYDELVKRAKRAMGLGRIRGLLWYQGESDTVREKDSESYKDKMEKLIVDLRLDLELPSLLVIQVALASGEGKFVEKVRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQVHLGIKLAHAYLNSTTYRN-----QIHHTQ 264
            MD + VL  F+ V+    RGG GAVSRDIF+LAGQSNMAGRGGV GGKWDG VP EC PSPWV+RLSA LEWEEAREPLHADIDV KTCGVGPGMAFANEV   RG GGLVGLVPCAVGGTKIG+WSRG+RLYDELV+RA +A+G G IR +LWYQGESDTVR+KD+E YKDKME+ I+DLR DL LPSLLVIQVALASGEGKF+EKVRRAQM + + NV+CVDAKGL L  DKLHLTT +QV LGI+LA AYL+STT+ +      I+HTQ
Sbjct:    1 MDSIVVLSWFLCVLVVAARGGLGAVSRDIFILAGQSNMAGRGGVFGGKWDGDVPEECRPSPWVFRLSAGLEWEEAREPLHADIDVGKTCGVGPGMAFANEVVKARGAGGLVGLVPCAVGGTKIGQWSRGTRLYDELVQRAMQAIGGGTIRAVLWYQGESDTVRKKDAEGYKDKMERFIMDLRSDLNLPSLLVIQVALASGEGKFIEKVRRAQMGITLPNVKCVDAKGLRLKPDKLHLTTMSQVQLGIRLARAYLDSTTHHHYQFNFNINHTQ 272          
BLAST of rna-XM_014648424.2 vs. UniProtKB/TrEMBL
Match: tr|K7M5N8|K7M5N8_SOYBN (SASA domain-containing protein OS=Glycine max OX=3847 GN=100793278 PE=4 SV=1)

HSP 1 Score: 399.438 bits (1025), Expect = 4.085e-138
Identity = 203/272 (74.63%), Postives = 228/272 (83.82%), Query Frame = 0
Query:    1 MDLMCVLLGFMWVME-GVRGGSGAVSRDIFVLAGQSNMAGRGGVVGGKWDGKVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEV--RRGGGGLVGLVPCAVGGTKIGEWSRGSRLYDELVKRAKRAMGLGRIRGLLWYQGESDTVREKDSESYKDKMEKLIVDLRLDLELPSLLVIQVALASGEGKFVEKVRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQVHLGIKLAHAYLNSTTYRN-----QIHHTQ 264
            MD + VL  F+ V+    RGG GAVSRDIF+LAGQSNMAGRGGV GGKWDG VP EC PSPWV+RLSA LEWEEAREPLHADIDV KTCGVGPGMAFANEV   RG GGLVGLVPCAVGGTKIG+WSRG+RLYDELV+RA +A+G G IR +LWYQGESDTVR+KD+E YKDKME+ I+DLR DL LPSLLVIQVALASGEGKF+EKVRRAQM + + NV+CVDAKGL L  DKLHLTT +QV LGI+LA AYL+STT+ +      I+HTQ
Sbjct:    1 MDSIVVLSWFLCVLVVAARGGLGAVSRDIFILAGQSNMAGRGGVFGGKWDGDVPEECRPSPWVFRLSAGLEWEEAREPLHADIDVGKTCGVGPGMAFANEVVKARGAGGLVGLVPCAVGGTKIGQWSRGTRLYDELVQRAMQAIGGGTIRAVLWYQGESDTVRKKDAEGYKDKMERFIMDLRSDLNLPSLLVIQVALASGEGKFIEKVRRAQMGITLPNVKCVDAKGLRLKPDKLHLTTMSQVQLGIRLARAYLDSTTHHHYQFNFNINHTQ 272          
BLAST of rna-XM_014648424.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445H3F9|A0A445H3F9_GLYSO (Putative carbohydrate esterase isoform B OS=Glycine soja OX=3848 GN=D0Y65_038085 PE=4 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 4.318e-130
Identity = 191/248 (77.02%), Postives = 212/248 (85.48%), Query Frame = 0
Query:    1 MDLMCVLLGFMWVME-GVRGGSGAVSRDIFVLAGQSNMAGRGGVVGGKWDGKVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEV--RRGGGGLVGLVPCAVGGTKIGEWSRGSRLYDELVKRAKRAMGLGRIRGLLWYQGESDTVREKDSESYKDKMEKLIVDLRLDLELPSLLVIQVALASGEGKFVEKVRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQVHLGIK 245
            MD + VL  F+ V+    RGG GAVSRDIF+LAGQSNMAGRGGV GGKWDG VP EC PSPWV+RLSA LEWEEAREPLHADIDV KTCGVGPGMAFANEV   RG GGLVGLVPCAVGGTKIG+WSRG+RLYDELV+RA +A+G G IR +LWYQGESDTVR+KD+E YKDKME+ I+DLR DL LPSLLVIQVALASGEGKF+EKVRRAQM + + NV+CVDAKGL L  DKLHLTT +QV LGI+
Sbjct:    1 MDSIVVLSWFLCVLVVAARGGLGAVSRDIFILAGQSNMAGRGGVFGGKWDGDVPEECRPSPWVFRLSAGLEWEEAREPLHADIDVGKTCGVGPGMAFANEVVKARGAGGLVGLVPCAVGGTKIGQWSRGTRLYDELVQRAMQAIGGGTIRAVLWYQGESDTVRKKDAEGYKDKMERFIMDLRSDLNLPSLLVIQVALASGEGKFIEKVRRAQMGITLPNVKCVDAKGLRLKPDKLHLTTMSQVQLGIR 248          
BLAST of rna-XM_014648424.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0GB03|A0A0R0GB03_SOYBN (SASA domain-containing protein OS=Glycine max OX=3847 GN=100793278 PE=4 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 4.318e-130
Identity = 191/248 (77.02%), Postives = 212/248 (85.48%), Query Frame = 0
Query:    1 MDLMCVLLGFMWVME-GVRGGSGAVSRDIFVLAGQSNMAGRGGVVGGKWDGKVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEV--RRGGGGLVGLVPCAVGGTKIGEWSRGSRLYDELVKRAKRAMGLGRIRGLLWYQGESDTVREKDSESYKDKMEKLIVDLRLDLELPSLLVIQVALASGEGKFVEKVRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQVHLGIK 245
            MD + VL  F+ V+    RGG GAVSRDIF+LAGQSNMAGRGGV GGKWDG VP EC PSPWV+RLSA LEWEEAREPLHADIDV KTCGVGPGMAFANEV   RG GGLVGLVPCAVGGTKIG+WSRG+RLYDELV+RA +A+G G IR +LWYQGESDTVR+KD+E YKDKME+ I+DLR DL LPSLLVIQVALASGEGKF+EKVRRAQM + + NV+CVDAKGL L  DKLHLTT +QV LGI+
Sbjct:    1 MDSIVVLSWFLCVLVVAARGGLGAVSRDIFILAGQSNMAGRGGVFGGKWDGDVPEECRPSPWVFRLSAGLEWEEAREPLHADIDVGKTCGVGPGMAFANEVVKARGAGGLVGLVPCAVGGTKIGQWSRGTRLYDELVQRAMQAIGGGTIRAVLWYQGESDTVRKKDAEGYKDKMERFIMDLRSDLNLPSLLVIQVALASGEGKFIEKVRRAQMGITLPNVKCVDAKGLRLKPDKLHLTTMSQVQLGIR 248          
BLAST of rna-XM_014648424.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0GK76|A0A0R0GK76_SOYBN (SASA domain-containing protein OS=Glycine max OX=3847 GN=100793278 PE=4 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 6.400e-127
Identity = 187/242 (77.27%), Postives = 207/242 (85.54%), Query Frame = 0
Query:    1 MDLMCVLLGFMWVME-GVRGGSGAVSRDIFVLAGQSNMAGRGGVVGGKWDGKVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEV--RRGGGGLVGLVPCAVGGTKIGEWSRGSRLYDELVKRAKRAMGLGRIRGLLWYQGESDTVREKDSESYKDKMEKLIVDLRLDLELPSLLVIQVALASGEGKFVEKVRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQ 239
            MD + VL  F+ V+    RGG GAVSRDIF+LAGQSNMAGRGGV GGKWDG VP EC PSPWV+RLSA LEWEEAREPLHADIDV KTCGVGPGMAFANEV   RG GGLVGLVPCAVGGTKIG+WSRG+RLYDELV+RA +A+G G IR +LWYQGESDTVR+KD+E YKDKME+ I+DLR DL LPSLLVIQVALASGEGKF+EKVRRAQM + + NV+CVDAKGL L  DKLHLTT +Q
Sbjct:    1 MDSIVVLSWFLCVLVVAARGGLGAVSRDIFILAGQSNMAGRGGVFGGKWDGDVPEECRPSPWVFRLSAGLEWEEAREPLHADIDVGKTCGVGPGMAFANEVVKARGAGGLVGLVPCAVGGTKIGQWSRGTRLYDELVQRAMQAIGGGTIRAVLWYQGESDTVRKKDAEGYKDKMERFIMDLRSDLNLPSLLVIQVALASGEGKFIEKVRRAQMGITLPNVKCVDAKGLRLKPDKLHLTTMSQ 242          
BLAST of rna-XM_014648424.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2QMI7|A0A0B2QMI7_GLYSO (Putative carbohydrate esterase OS=Glycine soja OX=3848 GN=glysoja_042462 PE=4 SV=1)

HSP 1 Score: 362.073 bits (928), Expect = 7.868e-124
Identity = 180/235 (76.60%), Postives = 201/235 (85.53%), Query Frame = 0
Query:   37 MAGRGGVVGGKWDGKVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEV--RRGGGGLVGLVPCAVGGTKIGEWSRGSRLYDELVKRAKRAMGLGRIRGLLWYQGESDTVREKDSESYKDKMEKLIVDLRLDLELPSLLVIQVALASGEGKFVEKVRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQVHLGIKLAHAYLNSTTYRN-----QIHHTQ 264
            MAGRGGV GGKWDG VP EC PSPWV+RLSA LEWEEAREPLHADIDV KTCGVGPGMAFANEV   RG GGLVGLVPCAVGGTKIG+WSRG+RLYDELV+RA +A+G G IR +LWYQGESDTVR+KD+E YKDKME+ I+DLR DL LPSLLVIQVALASGEGKF+EKVRRAQM + + NV+CVDAKGL L  DKLHLTT +QV LGI+LA AYL+STT+ +      I+HTQ
Sbjct:    1 MAGRGGVFGGKWDGDVPEECRPSPWVFRLSAGLEWEEAREPLHADIDVGKTCGVGPGMAFANEVVKARGAGGLVGLVPCAVGGTKIGQWSRGTRLYDELVQRAMQAIGGGTIRAVLWYQGESDTVRKKDAEGYKDKMERFIMDLRSDLNLPSLLVIQVALASGEGKFIEKVRRAQMGITLPNVKCVDAKGLRLKPDKLHLTTMSQVQLGIRLARAYLDSTTHHHYQFNFNINHTQ 235          
The following BLAST results are available for this feature:
BLAST of rna-XM_014648424.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
sp|Q8L9J9|CAES_ARATH1.509e-8756.78Probable carbohydrate esterase At4g34215 OS=Arabid... [more]
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BLAST of rna-XM_014648424.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 3
Match NameE-valueIdentityDescription
AT4G34215.21.544e-8856.78| carbohydrate esterase%2C putative (DUF303) | Chr... [more]
AT4G34215.11.544e-8856.78| carbohydrate esterase%2C putative (DUF303) | Chr... [more]
AT3G53010.12.270e-8653.72| carbohydrate esterase%2C putative (DUF303) | Chr... [more]
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BLAST of rna-XM_014648424.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3UD00|A0A1S3UD00_VIGRR0.000e+0100.00probable carbohydrate esterase At4g34215 OS=Vigna ... [more]
tr|A0A0S3RPW3|A0A0S3RPW3_PHAAN0.000e+096.64SASA domain-containing protein OS=Vigna angularis ... [more]
tr|A0A4D6MCA3|A0A4D6MCA3_VIGUN9.028e-17092.19Iduronate 2-sulfatase OS=Vigna unguiculata OX=3917... [more]
tr|A0A0L9V2M3|A0A0L9V2M3_PHAAN2.505e-16397.41SASA domain-containing protein OS=Phaseolus angula... [more]
tr|A0A445H3I4|A0A445H3I4_GLYSO4.085e-13874.63Putative carbohydrate esterase isoform A OS=Glycin... [more]
tr|K7M5N8|K7M5N8_SOYBN4.085e-13874.63SASA domain-containing protein OS=Glycine max OX=3... [more]
tr|A0A445H3F9|A0A445H3F9_GLYSO4.318e-13077.02Putative carbohydrate esterase isoform B OS=Glycin... [more]
tr|A0A0R0GB03|A0A0R0GB03_SOYBN4.318e-13077.02SASA domain-containing protein OS=Glycine max OX=3... [more]
tr|A0A0R0GK76|A0A0R0GK76_SOYBN6.400e-12777.27SASA domain-containing protein OS=Glycine max OX=3... [more]
tr|A0A0B2QMI7|A0A0B2QMI7_GLYSO7.868e-12476.60Putative carbohydrate esterase OS=Glycine soja OX=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036514SGNH hydrolase superfamilyGENE3D3.40.50.1110SGNH hydrolasecoord: 25..254
e-value: 8.8E-62
score: 211.1
IPR005181Sialate O-acetylesterase domainPFAMPF03629SASAcoord: 26..251
e-value: 2.6E-89
score: 298.8
NoneNo IPR availablePANTHERPTHR31988ESTERASE, PUTATIVE (DUF303)-RELATEDcoord: 25..255
NoneNo IPR availableSUPERFAMILY52266SGNH hydrolasecoord: 27..258

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014648424.2_VrVC1973A-SNU_v1 ID=rna-XM_014648424.2_VrVC1973A-SNU_v1; Name=rna-XM_014648424.2; organism=Vigna radiata; type=mRNA; length=819bp
ATGGATTTGATGTGTGTGTTATTGGGGTTTATGTGGGTTATGGAAGGTGT
GCGGGGAGGGTCAGGGGCAGTTTCGAGGGACATTTTTGTGCTGGCGGGAC
AGAGCAACATGGCTGGACGAGGTGGCGTTGTCGGGGGGAAATGGGATGGG
AAAGTACCGGCGGAGTGCGGGCCAAGCCCATGGGTTTGGCGGCTGAGTGC
GGAGCTGGAGTGGGAGGAGGCCCGGGAGCCTCTGCATGCGGACATTGATG
TGACGAAAACGTGTGGGGTTGGGCCTGGGATGGCGTTTGCGAACGAGGTT
CGGAGAGGTGGCGGTGGGCTTGTGGGCCTGGTGCCTTGCGCGGTGGGAGG
GACGAAGATCGGAGAGTGGAGTCGTGGGTCTCGGCTGTATGATGAGTTGG
TGAAACGTGCGAAGCGTGCGATGGGTTTGGGCCGGATCCGTGGTCTGCTT
TGGTATCAGGGAGAGAGTGACACGGTGAGAGAAAAAGACAGTGAGTCATA
TAAAGATAAGATGGAGAAGTTGATCGTGGACCTTCGATTGGATCTTGAAC
TCCCATCTCTTCTGGTTATCCAGGTAGCGCTGGCATCAGGGGAGGGAAAG
TTCGTAGAGAAAGTAAGGCGTGCTCAAATGGAGATGAAAATGGCGAATGT
GGAATGTGTGGATGCTAAGGGACTGAGTCTAAACGCGGATAAACTTCACC
TAACCACTACGGCTCAGGTTCATTTGGGCATTAAGTTAGCACATGCCTAT
CTTAATTCCACCACCTACCGTAACCAAATTCATCATACGCAATCTTATCA
ACCTCTTCGTACTTCCTGA
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protein sequence of rna-XM_014648424.2_VrVC1973A-SNU_v1

>rna-XM_014648424.2_VrVC1973A-SNU_v1 ID=rna-XM_014648424.2_VrVC1973A-SNU_v1; Name=rna-XM_014648424.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=272bp
MDLMCVLLGFMWVMEGVRGGSGAVSRDIFVLAGQSNMAGRGGVVGGKWDG
KVPAECGPSPWVWRLSAELEWEEAREPLHADIDVTKTCGVGPGMAFANEV
RRGGGGLVGLVPCAVGGTKIGEWSRGSRLYDELVKRAKRAMGLGRIRGLL
WYQGESDTVREKDSESYKDKMEKLIVDLRLDLELPSLLVIQVALASGEGK
FVEKVRRAQMEMKMANVECVDAKGLSLNADKLHLTTTAQVHLGIKLAHAY
LNSTTYRNQIHHTQSYQPLRTS
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mRNA from alignment at chr06:34780726..34781942+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014648424.2_VrVC1973A-SNU_v1 ID=rna-XM_014648424.2_VrVC1973A-SNU_v1; Name=rna-XM_014648424.2; organism=Vigna radiata; type=mRNA; length=1217bp; location=Sequence derived from: chr06:34780726..34781942+ (Vigna radiata
TTAAAATAAGACATCGATTAAGGAGACGTTAAATGCACGCATTATCTGTT TCCGGAGACATCAAATAATTTTCCGATGCTTACATTATTGAATGATGGTT GCTTAGTTGCCGGCGGGCCCCACAGGAAGCACGCGAGCAACCTAATTGGT AATGTGTGTGAGCCATAACTCAGAGTGGTTGTATAATAAGTTGATAAAAC GGTGGATCGATTATTGTTGTAATGGATTTGATGTGTGTGTTATTGGGGTT TATGTGGGTTATGGAAGGTGTGCGGGGAGGGTCAGGGGCAGTTTCGAGGG ACATTTTTGTGCTGGCGGGACAGAGCAACATGGCTGGACGAGGTGGCGTT GTCGGGGGGAAATGGGATGGGAAAGTACCGGCGGAGTGCGGGCCAAGCCC ATGGGTTTGGCGGCTGAGTGCGGAGCTGGAGTGGGAGGAGGCCCGGGAGC CTCTGCATGCGGACATTGATGTGACGAAAACGTGTGGGGTTGGGCCTGGG ATGGCGTTTGCGAACGAGGTTCGGAGAGGTGGCGGTGGGCTTGTGGGCCT GGTGCCTTGCGCGGTGGGAGGGACGAAGATCGGAGAGTGGAGTCGTGGGT CTCGGCTGTATGATGAGTTGGTGAAACGTGCGAAGCGTGCGATGGGTTTG GGCCGGATCCGTGGTCTGCTTTGGTATCAGGGAGAGAGTGACACGGTGAG AGAAAAAGACAGTGAGTCATATAAAGATAAGATGGAGAAGTTGATCGTGG ACCTTCGATTGGATCTTGAACTCCCATCTCTTCTGGTTATCCAGGTAGTT TTGATTCATGTTTTCcattatgttattattagtTAGTGTTTGTAATAGTC CCACATCGGAATGTTCAGGTAGCGCTGGCATCAGGGGAGGGAAAGTTCGT AGAGAAAGTAAGGCGTGCTCAAATGGAGATGAAAATGGCGAATGTGGAAT GTGTGGATGCTAAGGGACTGAGTCTAAACGCGGATAAACTTCACCTAACC ACTACGGCTCAGGTTCATTTGGGCATTAAGTTAGCACATGCCTATCTTAA TTCCACCACCTACCGTAACCAAATTCATCATACGCAATCTTATCAACCTC TTCGTACTTCCTGATTGCTAAACAAACCCCCCAAAACTACACTCTCACCA CCTTTTCATTTTCCcatcatgtattttttttatgttacataattattata ttataatattttagaca
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Coding sequence (CDS) from alignment at chr06:34780726..34781942+

>rna-XM_014648424.2_VrVC1973A-SNU_v1 ID=rna-XM_014648424.2_VrVC1973A-SNU_v1; Name=rna-XM_014648424.2; organism=Vigna radiata; type=CDS; length=819bp; location=Sequence derived from: chr06:34780726..34781942+ (Vigna radiata
ATGGATTTGATGTGTGTGTTATTGGGGTTTATGTGGGTTATGGAAGGTGT
GCGGGGAGGGTCAGGGGCAGTTTCGAGGGACATTTTTGTGCTGGCGGGAC
AGAGCAACATGGCTGGACGAGGTGGCGTTGTCGGGGGGAAATGGGATGGG
AAAGTACCGGCGGAGTGCGGGCCAAGCCCATGGGTTTGGCGGCTGAGTGC
GGAGCTGGAGTGGGAGGAGGCCCGGGAGCCTCTGCATGCGGACATTGATG
TGACGAAAACGTGTGGGGTTGGGCCTGGGATGGCGTTTGCGAACGAGGTT
CGGAGAGGTGGCGGTGGGCTTGTGGGCCTGGTGCCTTGCGCGGTGGGAGG
GACGAAGATCGGAGAGTGGAGTCGTGGGTCTCGGCTGTATGATGAGTTGG
TGAAACGTGCGAAGCGTGCGATGGGTTTGGGCCGGATCCGTGGTCTGCTT
TGGTATCAGGGAGAGAGTGACACGGTGAGAGAAAAAGACAGTGAGTCATA
TAAAGATAAGATGGAGAAGTTGATCGTGGACCTTCGATTGGATCTTGAAC
TCCCATCTCTTCTGGTTATCCAGGTAGCGCTGGCATCAGGGGAGGGAAAG
TTCGTAGAGAAAGTAAGGCGTGCTCAAATGGAGATGAAAATGGCGAATGT
GGAATGTGTGGATGCTAAGGGACTGAGTCTAAACGCGGATAAACTTCACC
TAACCACTACGGCTCAGGTTCATTTGGGCATTAAGTTAGCACATGCCTAT
CTTAATTCCACCACCTACCGTAACCAAATTCATCATACGCAATCTTATCA
ACCTCTTCGTACTTCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR036514SGNH_hydro_sf
IPR005181SASA