rna-XM_014648434.2
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Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_014648434.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q6X7J9|WOX4_ARATH (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 1.017e-72 Identity = 141/258 (54.65%), Postives = 170/258 (65.89%), Query Frame = 0
Query: 1 MKVHQFARGF---WEHE---PSLTLGCKRLRPLAPKLSNTDSTTSITSPPVT--TFDLKSFIKPESASRKLGSSDDNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLG--LAHSPRTPTTLVSPSFSCSVIT--SLDTTKRGEVVERDEEDSPLKK--CRSWAFEYLE-----DQSWSSW-----KEEEHRTLELFPLHPEGR 234
MKVH+F+ GF W+ SL+L CKRLRPLAPKLS + + +S VT TFDLK+FI+P+ + ++KRDP Q+ETH PGGTRWNPTQEQIGILEMLY+GGMRTPNAQQIE IT+QL KYGKIEGKNVFYWFQNHKARERQKQKRNNL S T T + +PS + T SLD + V + + + K CRSW FE LE +++ S+ K ++ TLELFPLHPEGR
Sbjct: 1 MKVHEFSNGFSSSWDQHDSTSSLSLSCKRLRPLAPKLSGSPPSPPSSSSGVTSATFDLKNFIRPDQTG---PTKFEHKRDPPH---QLETH-PGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQKQKRNNLISLSCQSSFTTTGVFNPSVTMKTRTSSSLDIMREPMVEKEELVEENEYKRTCRSWGFENLEIENRRNKNSSTMATTFNKIIDNVTLELFPLHPEGR 251
BLAST of rna-XM_014648434.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q7XTV3|WOX4_ORYSJ (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX4 PE=2 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 1.013e-43 Identity = 97/229 (42.36%), Postives = 129/229 (56.33%), Query Frame = 0
Query: 15 PSLTLGCKRLRPLAPKLSNTDSTTSITSPPVTTFDLKSFIKPES--ASRKLGSSDDNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLVSPSFSCSVITSLDTTKRGEVVERDEED---SPLKKCRSWAFEYLEDQSWSSWKEE----EHRTLELFPLHPEGR 234
P+ + C LRPLAPK+S + I P F+ P + AS+ L + V+ G TRWNP+ EQI +LEMLYRGGMRTPN+ QIE+IT +L KYG+IEGKNVFYWFQNHKARERQKQKR L L S P+ L + T+ +T + E E+D ED S ++C++W + + + + + TLELFPLHP+G+
Sbjct: 39 PAFSFKC--LRPLAPKISLPEPRKMIAPP--------DFVVPRARNASKLLNYT-------------VQVPAAGTTRWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQKQKRAAL-LTLSTLDPSLLPA--------TANETKEAPEKKEKDVEDGLASCKRRCKAWGDGAGDGDAVVATEAAGGCTDEVTLELFPLHPQGK 235
BLAST of rna-XM_014648434.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q25AM2|WOX4_ORYSI (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.013e-43 Identity = 97/229 (42.36%), Postives = 129/229 (56.33%), Query Frame = 0
Query: 15 PSLTLGCKRLRPLAPKLSNTDSTTSITSPPVTTFDLKSFIKPES--ASRKLGSSDDNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLVSPSFSCSVITSLDTTKRGEVVERDEED---SPLKKCRSWAFEYLEDQSWSSWKEE----EHRTLELFPLHPEGR 234
P+ + C LRPLAPK+S + I P F+ P + AS+ L + V+ G TRWNP+ EQI +LEMLYRGGMRTPN+ QIE+IT +L KYG+IEGKNVFYWFQNHKARERQKQKR L L S P+ L + T+ +T + E E+D ED S ++C++W + + + + + TLELFPLHP+G+
Sbjct: 39 PAFSFKC--LRPLAPKISLPEPRKMIAPP--------DFVVPRARNASKLLNYT-------------VQVPAAGTTRWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQKQKRAAL-LTLSTLDPSLLPA--------TANETKEAPEKKEKDVEDGLASCKRRCKAWGDGAGDGDAVVATEAAGGCTDEVTLELFPLHPQGK 235
BLAST of rna-XM_014648434.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q6X7K0|WOX1_ARATH (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.599e-27 Identity = 61/133 (45.86%), Postives = 84/133 (63.16%), Query Frame = 0
Query: 20 GCKRLRPLAPKLSNTDSTTSITSPPVTTFDLKSF-IKPESASRKLGSSDDNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKR 151
G ++LRPL P+L++ T ++ + F++ + E R+L + +P P V +RWNPT +Q+ +LE LYR G RTP+A I+QIT QL +YGKIEGKNVFYWFQNHKARERQK++R
Sbjct: 16 GGRKLRPLIPRLTSC-PTAAVNTNSDHRFNMAVVTMTAEQNKRELMMLNS---EPQHPPVMV------SSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQKRRR 138
BLAST of rna-XM_014648434.2 vs. UniProtKB/Swiss-Prot
Match: sp|A2XZR3|WOX2_ORYSI (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica OX=39946 GN=WOX2 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.896e-27 Identity = 47/64 (73.44%), Postives = 55/64 (85.94%), Query Frame = 0
Query: 88 TRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKR 151
TRW PT EQ+ +LE +YRGG+RTPNA QI+QIT LS YG+IEGKNVFYWFQNHKAR+RQK +R
Sbjct: 26 TRWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQKLRR 89
BLAST of rna-XM_014648434.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q5W7C3|WOX2_ORYSJ (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX2 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.633e-27 Identity = 47/64 (73.44%), Postives = 55/64 (85.94%), Query Frame = 0
Query: 88 TRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKR 151
TRW PT EQ+ +LE +YRGG+RTPNA QI+QIT LS YG+IEGKNVFYWFQNHKAR+RQK +R
Sbjct: 26 TRWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQKLRR 89
BLAST of rna-XM_014648434.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q8H1D2|WOX5_ARATH (WUSCHEL-related homeobox 5 OS=Arabidopsis thaliana OX=3702 GN=WOX5 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.432e-26 Identity = 48/85 (56.47%), Postives = 61/85 (71.76%), Query Frame = 0
Query: 86 GGT-----RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTT 165
GGT RWNPT EQ+ IL L+R G+RTP QI++I+ +LS YGKIE KNVFYWFQNHKARERQK+++ ++ H P+T
Sbjct: 16 GGTGTKCGRWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQKRRKISIDFDHHHHQPST 100
BLAST of rna-XM_014648434.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SIB4|WOX3_ARATH (WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana OX=3702 GN=WOX3 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.098e-25 Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 0
Query: 86 GGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKR 151
TRW PT EQ+ ILE +YR G+RTPNA QI+QIT L+ YG+IEGKNVFYWFQNHKAR+RQK ++
Sbjct: 5 ASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARDRQKLRK 70
BLAST of rna-XM_014648434.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q6X7K1|WOX2_ARATH (WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana OX=3702 GN=WOX2 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.155e-25 Identity = 46/75 (61.33%), Postives = 59/75 (78.67%), Query Frame = 0
Query: 77 QGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKR 151
+ +V +RWNPT++QI +LE LY+ G+RTP+A QI+QIT +L YG IEGKNVFYWFQNHKAR+RQKQK+
Sbjct: 2 ENEVNAGTASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQKQKQ 76
BLAST of rna-XM_014648434.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q7XM13|WOX1_ORYSJ (WUSCHEL-related homeobox 1 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX1 PE=1 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 9.975e-24 Identity = 44/67 (65.67%), Postives = 55/67 (82.09%), Query Frame = 0
Query: 85 PGGTRWNPTQEQIGIL-EMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQK 150
P GTRW PT EQI IL E+ Y G+R+PN++QI++I L +YG+IEGKNVFYWFQNHKARERQK++
Sbjct: 31 PSGTRWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQKKR 97
BLAST of rna-XM_014648434.2 vs. Araport11
Match: AT1G46480.1 (| WUSCHEL related homeobox 4 | Chr1:17236903-17237953 REVERSE LENGTH=251 | 201606) HSP 1 Score: 224.942 bits (572), Expect = 1.041e-73 Identity = 141/258 (54.65%), Postives = 170/258 (65.89%), Query Frame = 0
Query: 1 MKVHQFARGF---WEHE---PSLTLGCKRLRPLAPKLSNTDSTTSITSPPVT--TFDLKSFIKPESASRKLGSSDDNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLG--LAHSPRTPTTLVSPSFSCSVIT--SLDTTKRGEVVERDEEDSPLKK--CRSWAFEYLE-----DQSWSSW-----KEEEHRTLELFPLHPEGR 234
MKVH+F+ GF W+ SL+L CKRLRPLAPKLS + + +S VT TFDLK+FI+P+ + ++KRDP Q+ETH PGGTRWNPTQEQIGILEMLY+GGMRTPNAQQIE IT+QL KYGKIEGKNVFYWFQNHKARERQKQKRNNL S T T + +PS + T SLD + V + + + K CRSW FE LE +++ S+ K ++ TLELFPLHPEGR
Sbjct: 1 MKVHEFSNGFSSSWDQHDSTSSLSLSCKRLRPLAPKLSGSPPSPPSSSSGVTSATFDLKNFIRPDQTG---PTKFEHKRDPPH---QLETH-PGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQKQKRNNLISLSCQSSFTTTGVFNPSVTMKTRTSSSLDIMREPMVEKEELVEENEYKRTCRSWGFENLEIENRRNKNSSTMATTFNKIIDNVTLELFPLHPEGR 251
BLAST of rna-XM_014648434.2 vs. Araport11
Match: AT1G46480.2 (| WUSCHEL related homeobox 4 | Chr1:17237162-17237953 REVERSE LENGTH=190 | 201606) HSP 1 Score: 199.519 bits (506), Expect = 1.155e-64 Identity = 115/188 (61.17%), Postives = 134/188 (71.28%), Query Frame = 0
Query: 1 MKVHQFARGF---WEHE---PSLTLGCKRLRPLAPKLSNTDSTTSITSPPVT--TFDLKSFIKPESASRKLGSSDDNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLG--LAHSPRTPTTLVSPSFSCSVITS 178
MKVH+F+ GF W+ SL+L CKRLRPLAPKLS + + +S VT TFDLK+FI+P+ + ++KRDP Q+ETH PGGTRWNPTQEQIGILEMLY+GGMRTPNAQQIE IT+QL KYGKIEGKNVFYWFQNHKARERQKQKRNNL S T T + +PS + TS
Sbjct: 1 MKVHEFSNGFSSSWDQHDSTSSLSLSCKRLRPLAPKLSGSPPSPPSSSSGVTSATFDLKNFIRPDQTG---PTKFEHKRDPPH---QLETH-PGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQKQKRNNLISLSCQSSFTTTGVFNPSVTMKTRTS 181
BLAST of rna-XM_014648434.2 vs. Araport11
Match: AT3G18010.1 (| WUSCHEL related homeobox 1 | Chr3:6161155-6163183 REVERSE LENGTH=350 | 201606) HSP 1 Score: 110.538 bits (275), Expect = 1.636e-28 Identity = 61/133 (45.86%), Postives = 84/133 (63.16%), Query Frame = 0
Query: 20 GCKRLRPLAPKLSNTDSTTSITSPPVTTFDLKSF-IKPESASRKLGSSDDNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKR 151
G ++LRPL P+L++ T ++ + F++ + E R+L + +P P V +RWNPT +Q+ +LE LYR G RTP+A I+QIT QL +YGKIEGKNVFYWFQNHKARERQK++R
Sbjct: 16 GGRKLRPLIPRLTSC-PTAAVNTNSDHRFNMAVVTMTAEQNKRELMMLNS---EPQHPPVMV------SSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQKRRR 138
BLAST of rna-XM_014648434.2 vs. Araport11
Match: AT3G11260.1 (| WUSCHEL related homeobox 5 | Chr3:3527606-3528263 FORWARD LENGTH=182 | 201606) HSP 1 Score: 102.834 bits (255), Expect = 5.558e-27 Identity = 48/85 (56.47%), Postives = 61/85 (71.76%), Query Frame = 0
Query: 86 GGT-----RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTT 165
GGT RWNPT EQ+ IL L+R G+RTP QI++I+ +LS YGKIE KNVFYWFQNHKARERQK+++ ++ H P+T
Sbjct: 16 GGTGTKCGRWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQKRRKISIDFDHHHHQPST 100
BLAST of rna-XM_014648434.2 vs. Araport11
Match: AT2G28610.1 (| Homeodomain-like superfamily protein | Chr2:12262115-12263286 FORWARD LENGTH=244 | 201606) HSP 1 Score: 103.605 bits (257), Expect = 1.123e-26 Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 0
Query: 86 GGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKR 151
TRW PT EQ+ ILE +YR G+RTPNA QI+QIT L+ YG+IEGKNVFYWFQNHKAR+RQK ++
Sbjct: 5 ASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARDRQKLRK 70
BLAST of rna-XM_014648434.2 vs. Araport11
Match: AT5G59340.1 (| WUSCHEL related homeobox 2 | Chr5:23933408-23934627 REVERSE LENGTH=260 | 201606) HSP 1 Score: 103.99 bits (258), Expect = 1.181e-26 Identity = 46/75 (61.33%), Postives = 59/75 (78.67%), Query Frame = 0
Query: 77 QGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKR 151
+ +V +RWNPT++QI +LE LY+ G+RTP+A QI+QIT +L YG IEGKNVFYWFQNHKAR+RQKQK+
Sbjct: 2 ENEVNAGTASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQKQKQ 76
BLAST of rna-XM_014648434.2 vs. Araport11
Match: AT5G05770.1 (| WUSCHEL related homeobox 7 | Chr5:1734487-1734855 FORWARD LENGTH=122 | 201606) HSP 1 Score: 93.9745 bits (232), Expect = 2.424e-24 Identity = 40/63 (63.49%), Postives = 53/63 (84.13%), Query Frame = 0
Query: 89 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKR 151
RWNPT EQ+ +L L++ G+RTP+ QI++I+++LS YGKIE KNVFYWFQNHKARERQK ++
Sbjct: 29 RWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFYGKIESKNVFYWFQNHKARERQKCRK 91
BLAST of rna-XM_014648434.2 vs. Araport11
Match: AT2G17950.1 (| Homeodomain-like superfamily protein | Chr2:7809100-7810671 REVERSE LENGTH=292 | 201606) HSP 1 Score: 95.9005 bits (237), Expect = 2.543e-23 Identity = 44/81 (54.32%), Postives = 59/81 (72.84%), Query Frame = 0
Query: 88 TRWNPTQEQIGIL-EMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLV 167
TRW PT EQI IL E+ Y +R+P A QI++IT +L ++GKIEGKNVFYWFQNHKARERQK++ N + +P +++
Sbjct: 37 TRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQNHKARERQKKRFNGTNMTTPSSSPNSVM 117
BLAST of rna-XM_014648434.2 vs. Araport11
Match: AT2G01500.1 (| Homeodomain-like superfamily protein | Chr2:224470-225997 REVERSE LENGTH=271 | 201606) HSP 1 Score: 91.2781 bits (225), Expect = 7.778e-22 Identity = 79/233 (33.91%), Postives = 106/233 (45.49%), Query Frame = 0
Query: 39 SITSPPV--TTFDLKSFIKPESASRKLGSSDDNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSP------------RTPTTLVSPSF---------------SCSVITSLDTTKRGEVVERDEEDSPLKKCRSWAF-----------EYLEDQSWSSWKEE--EHRTLELFPL 229
S T PP+ T D+ + + G D ++R + P RWNPT EQI LE LYR G RTP +QI+QI +L KYG+IEGKNVFYWFQNHKARER K++R G P R T + PSF S + + + G E D+ S + K +W E D++ + +EE ++RTL LFP+
Sbjct: 16 STTQPPLLLTHCDINGNDHHQLITASSGEHDIDERKNNIPAAAT-------LRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARERLKRRRREGGAIIKPHKDVKDSSSGGHRVDQTKLCPSFPHTNRPQPQHELDPASYNKDNNANNEDHGTTEESDQRASEVGKYATWRNLVTWSITQQPEEINIDENVNGEEEETRDNRTLNLFPV 241
BLAST of rna-XM_014648434.2 vs. Araport11
Match: AT2G33880.2 (| homeobox-3 | Chr2:14342037-14343597 REVERSE LENGTH=388 | 201606) HSP 1 Score: 70.4774 bits (171), Expect = 7.064e-14 Identity = 35/83 (42.17%), Postives = 48/83 (57.83%), Query Frame = 0
Query: 66 SDDNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQK 148
S ++ P S +VE RWNP EQI ILE ++ GM P ++I +I QL +YG++ NVFYWFQN K+R + K
Sbjct: 32 SASHRSSPFSSGCEVERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 114
BLAST of rna-XM_014648434.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UD08|A0A1S3UD08_VIGRR (WUSCHEL-related homeobox 4 OS=Vigna radiata var. radiata OX=3916 GN=LOC106764194 PE=4 SV=1) HSP 1 Score: 485.723 bits (1249), Expect = 1.566e-173 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
Query: 1 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDSTTSITSPPVTTFDLKSFIKPESASRKLGSSDDNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLVSPSFSCSVITSLDTTKRGEVVERDEEDSPLKKCRSWAFEYLEDQSWSSWKEEEHRTLELFPLHPEGR 234
MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDSTTSITSPPVTTFDLKSFIKPESASRKLGSSDDNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLVSPSFSCSVITSLDTTKRGEVVERDEEDSPLKKCRSWAFEYLEDQSWSSWKEEEHRTLELFPLHPEGR
Sbjct: 1 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDSTTSITSPPVTTFDLKSFIKPESASRKLGSSDDNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLVSPSFSCSVITSLDTTKRGEVVERDEEDSPLKKCRSWAFEYLEDQSWSSWKEEEHRTLELFPLHPEGR 234
BLAST of rna-XM_014648434.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RPY5|A0A0S3RPY5_PHAAN (Homeobox domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G268700 PE=4 SV=1) HSP 1 Score: 483.026 bits (1242), Expect = 2.086e-172 Identity = 233/234 (99.57%), Postives = 233/234 (99.57%), Query Frame = 0
Query: 1 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDSTTSITSPPVTTFDLKSFIKPESASRKLGSSDDNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLVSPSFSCSVITSLDTTKRGEVVERDEEDSPLKKCRSWAFEYLEDQSWSSWKEEEHRTLELFPLHPEGR 234
MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDSTTSITSPPVTTFDLKSFIKPESASRKLGSS DNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLVSPSFSCSVITSLDTTKRGEVVERDEEDSPLKKCRSWAFEYLEDQSWSSWKEEEHRTLELFPLHPEGR
Sbjct: 1 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDSTTSITSPPVTTFDLKSFIKPESASRKLGSSHDNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLVSPSFSCSVITSLDTTKRGEVVERDEEDSPLKKCRSWAFEYLEDQSWSSWKEEEHRTLELFPLHPEGR 234
BLAST of rna-XM_014648434.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9V1M0|A0A0L9V1M0_PHAAN (Homeobox domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan07g269400 PE=4 SV=1) HSP 1 Score: 483.026 bits (1242), Expect = 2.086e-172 Identity = 233/234 (99.57%), Postives = 233/234 (99.57%), Query Frame = 0
Query: 1 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDSTTSITSPPVTTFDLKSFIKPESASRKLGSSDDNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLVSPSFSCSVITSLDTTKRGEVVERDEEDSPLKKCRSWAFEYLEDQSWSSWKEEEHRTLELFPLHPEGR 234
MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDSTTSITSPPVTTFDLKSFIKPESASRKLGSS DNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLVSPSFSCSVITSLDTTKRGEVVERDEEDSPLKKCRSWAFEYLEDQSWSSWKEEEHRTLELFPLHPEGR
Sbjct: 1 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDSTTSITSPPVTTFDLKSFIKPESASRKLGSSHDNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLVSPSFSCSVITSLDTTKRGEVVERDEEDSPLKKCRSWAFEYLEDQSWSSWKEEEHRTLELFPLHPEGR 234
BLAST of rna-XM_014648434.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MDV7|A0A4D6MDV7_VIGUN (Homeobox domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG7g262 PE=4 SV=1) HSP 1 Score: 473.011 bits (1216), Expect = 3.374e-168 Identity = 229/236 (97.03%), Postives = 231/236 (97.88%), Query Frame = 0
Query: 1 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDSTTSITSPPVTTFDLKSFIKPESASRKLGSSDDNKRDPSSPQGQ--VETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLVSPSFSCSVITSLDTTKRGEVVERDEEDSPLKKCRSWAFEYLEDQSWSSWKEEEHRTLELFPLHPEGR 234
MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDSTTSITS PVTTFDLKSFIKPESASRKL SSDDNKRDP+SPQGQ VETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLVSPSFSCSVITSLDTTKRGEVVERDEEDSPLKKCRSWAFEYLE+QSWSSWKEEE RTLELFPLHPEGR
Sbjct: 12 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDSTTSITSSPVTTFDLKSFIKPESASRKLASSDDNKRDPTSPQGQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLVSPSFSCSVITSLDTTKRGEVVERDEEDSPLKKCRSWAFEYLEEQSWSSWKEEEQRTLELFPLHPEGR 247
BLAST of rna-XM_014648434.2 vs. UniProtKB/TrEMBL
Match: tr|V7CU02|V7CU02_PHAVU (Homeobox domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G023600g PE=4 SV=1) HSP 1 Score: 461.07 bits (1185), Expect = 9.813e-164 Identity = 222/234 (94.87%), Postives = 226/234 (96.58%), Query Frame = 0
Query: 1 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDSTTSITSPPVTTFDLKSFIKPESASRKLGSSDDNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLVSPSFSCSVITSLDTTKRGEVVERDEEDSPLKKCRSWAFEYLEDQSWSSWKEEEHRTLELFPLHPEGR 234
MKVHQ ARGFWEHEPSLTLGCKRLRPLAPKLSNT+STTSITSPPVTTFDLKSFIKPESAS KLGS D NKRDP+SP+GQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIE ITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTL+S SFSCSVITS DTTKRGE VERDEEDSPLKKCRSWAFEYLEDQSWSSWKEEEHRTLELFPLHPEGR
Sbjct: 1 MKVHQLARGFWEHEPSLTLGCKRLRPLAPKLSNTNSTTSITSPPVTTFDLKSFIKPESASIKLGSCDHNKRDPTSPEGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEHITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLLSSSFSCSVITSFDTTKRGEGVERDEEDSPLKKCRSWAFEYLEDQSWSSWKEEEHRTLELFPLHPEGR 234
BLAST of rna-XM_014648434.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371EBL4|A0A371EBL4_MUCPR (WUSCHEL-related homeobox 4 OS=Mucuna pruriens OX=157652 GN=WOX4 PE=4 SV=1) HSP 1 Score: 423.32 bits (1087), Expect = 6.864e-149 Identity = 212/234 (90.60%), Postives = 220/234 (94.02%), Query Frame = 0
Query: 1 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDSTTSITSPPVTTFDLKSFIKPESASRKLGSSDDNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLVSPSFSCSVITSLDTTKRGEVVERDEEDSPLKKCRSWAFEYLEDQSWSSWKEEEHRTLELFPLHPEGR 234
MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTD+ + VTTFDLKSFIKPES S KLGSSDDNKRDP SPQ Q ETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQIT QLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLVSP FSCSVI++LD+TKRGE+VER+EEDSPLKKCRSWAFEYLE+QSWSSWKEEEHRTLELFPLHPEGR
Sbjct: 1 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDTPITTPP--VTTFDLKSFIKPESPSIKLGSSDDNKRDPPSPQAQ-ETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLVSPPFSCSVISTLDSTKRGEIVEREEEDSPLKKCRSWAFEYLEEQSWSSWKEEEHRTLELFPLHPEGR 231
BLAST of rna-XM_014648434.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445GB55|A0A445GB55_GLYSO (WUSCHEL-related homeobox 4 OS=Glycine soja OX=3848 GN=D0Y65_046848 PE=4 SV=1) HSP 1 Score: 404.445 bits (1038), Expect = 3.131e-141 Identity = 208/245 (84.90%), Postives = 219/245 (89.39%), Query Frame = 0
Query: 1 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDSTTSITSP---PVTTFDLKSFIKPESASRKLG-------SSDDNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPR-TPTTLVSPSFSCSVITSLDTTKRGEVVERDEEDSPLKKCRSWAFEYLEDQSWSSWKEEEHRTLELFPLHPEGR 234
MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTD T I+ P PVTT DLKSFIKP+SASRKLG ++++NKRDPSSP GQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQIT QLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHS R TPTT+VS FSCSVIT+LDTTKRGE+VER+EEDSPLKKCRSWAFEYLEDQ +EEEHRTLELFPLHPEGR
Sbjct: 1 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDDT--ISPPHHHPVTTLDLKSFIKPQSASRKLGIGSSSDDNNNNNKRDPSSPHGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSLRTTPTTIVSHPFSCSVITTLDTTKRGEIVEREEEDSPLKKCRSWAFEYLEDQ-----REEEHRTLELFPLHPEGR 238
BLAST of rna-XM_014648434.2 vs. UniProtKB/TrEMBL
Match: tr|K7MNN6|K7MNN6_SOYBN (Homeobox domain-containing protein OS=Glycine max OX=3847 GN=100788918 PE=4 SV=1) HSP 1 Score: 404.06 bits (1037), Expect = 4.609e-141 Identity = 208/246 (84.55%), Postives = 219/246 (89.02%), Query Frame = 0
Query: 1 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDSTTSITSP---PVTTFDLKSFIKPESASRKLG--------SSDDNKRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPR-TPTTLVSPSFSCSVITSLDTTKRGEVVERDEEDSPLKKCRSWAFEYLEDQSWSSWKEEEHRTLELFPLHPEGR 234
MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTD T I+ P PVTT DLKSFIKP+SASRKLG ++++NKRDPSSP GQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQIT QLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHS R TPTT+VS FSCSVIT+LDTTKRGE+VER+EEDSPLKKCRSWAFEYLEDQ +EEEHRTLELFPLHPEGR
Sbjct: 1 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDDT--ISPPHHHPVTTLDLKSFIKPQSASRKLGIGSSSDDNNNNNNKRDPSSPHGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSLRTTPTTIVSHPFSCSVITTLDTTKRGEIVEREEEDSPLKKCRSWAFEYLEDQ-----REEEHRTLELFPLHPEGR 239
BLAST of rna-XM_014648434.2 vs. UniProtKB/TrEMBL
Match: tr|A0A151S0A9|A0A151S0A9_CAJCA (WUSCHEL-related homeobox 4 OS=Cajanus cajan OX=3821 GN=KK1_030176 PE=4 SV=1) HSP 1 Score: 395.586 bits (1015), Expect = 7.912e-138 Identity = 208/237 (87.76%), Postives = 211/237 (89.03%), Query Frame = 0
Query: 1 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDSTTSITSPPVTTFDLKSFIKPESASRKLGSSDDNKRDPSSPQG--QVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLVSPSFSCSVITSLDTTK-RGEVVERDEEDSPLKKCRSWAFEYLEDQSWSSWKEEEHRTLELFPLHPEGR 234
MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLS TD+ T T FDLKSFIKPESASRKLGSSDDNKRDP SP QVETHI GGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTL SP FSCSVITSLD+TK V ER+EEDSPLKKCRSWAFEY EDQSWSS KEE HRTLELFPLHPEGR
Sbjct: 1 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSYTDTNT-------TPFDLKSFIKPESASRKLGSSDDNKRDPPSPHAHAQVETHISGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLWSPPFSCSVITSLDSTKRDEVVDEREEEDSPLKKCRSWAFEYSEDQSWSSQKEEGHRTLELFPLHPEGR 230
BLAST of rna-XM_014648434.2 vs. UniProtKB/TrEMBL
Match: tr|I1M8P2|I1M8P2_SOYBN (Homeobox domain-containing protein OS=Glycine max OX=3847 GN=100500674 PE=4 SV=1) HSP 1 Score: 392.889 bits (1008), Expect = 7.592e-137 Identity = 211/238 (88.66%), Postives = 215/238 (90.34%), Query Frame = 0
Query: 1 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDSTTSITSPPVTTFDLKSFIKPESASRKLG--SSDDN--KRDPSSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLVSPSFSCSVITSLDTTKRGEVVERDEEDSPLKKCRSWAFEYLEDQSWSSWKEEEHRTLELFPLHPEGR 234
MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTD T S PVTTFDLKSFIKPESASRKLG SSDDN KRDPSSPQGQ ETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQIT QLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRT T SP FSC VIT++DTTKRGEVVER+EEDSPLKKCRSWAFEYLEDQ +EEEHRTLELFPLHPEGR
Sbjct: 1 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTD-TISPPHHPVTTFDLKSFIKPESASRKLGIGSSDDNTNKRDPSSPQGQAETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRT-TLTTSPPFSCCVITTMDTTKRGEVVEREEEDSPLKKCRSWAFEYLEDQ-----REEEHRTLELFPLHPEGR 231 The following BLAST results are available for this feature:
BLAST of rna-XM_014648434.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot) Total hits: 10
BLAST of rna-XM_014648434.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11) Total hits: 10
BLAST of rna-XM_014648434.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_014648434.2_VrVC1973A-SNU_v1 ID=rna-XM_014648434.2_VrVC1973A-SNU_v1; Name=rna-XM_014648434.2; organism=Vigna radiata; type=mRNA; length=705bpback to top protein sequence of rna-XM_014648434.2_VrVC1973A-SNU_v1 >rna-XM_014648434.2_VrVC1973A-SNU_v1 ID=rna-XM_014648434.2_VrVC1973A-SNU_v1; Name=rna-XM_014648434.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=234bpback to top mRNA from alignment at chr06:35076006..35077516+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_014648434.2_VrVC1973A-SNU_v1 ID=rna-XM_014648434.2_VrVC1973A-SNU_v1; Name=rna-XM_014648434.2; organism=Vigna radiata; type=mRNA; length=1511bp; location=Sequence derived from: chr06:35076006..35077516+ (Vigna radiataback to top Coding sequence (CDS) from alignment at chr06:35076006..35077516+ >rna-XM_014648434.2_VrVC1973A-SNU_v1 ID=rna-XM_014648434.2_VrVC1973A-SNU_v1; Name=rna-XM_014648434.2; organism=Vigna radiata; type=CDS; length=705bp; location=Sequence derived from: chr06:35076006..35077516+ (Vigna radiataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|