rna-XM_014649074.2
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Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_014649074.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SX79|RB47C_ARATH (Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C PE=2 SV=1) HSP 1 Score: 509.99 bits (1312), Expect = 2.071e-179 Identity = 263/405 (64.94%), Postives = 309/405 (76.30%), Query Frame = 0
Query: 23 QPAGSPAVARPQQWLPMQYPAAMVMPHHMLPPQHYAPPPYMPFHHHQYAPPHVPHQQ-----HQNGSSGENKTVWIGDLHHWMDENYLHRCFAS--TGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKG-SDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGG--QSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS 417
QP SP P W M+YP +++PH M+ YAPPP+ P+H QY H H Q HQN +GENKT+W+GDLHHWMDE YL+ FAS EI S+KVIRNK GLSEGYGFVEF SH A+KVL+ + G MPNT+Q FRLNWASFSTG+K +N PDLSIFVGDL+ DV+D+LLHETF+ +PSVKAAKVV DANTGRSKGYGFVRFGD++ER++AMT+MNGV CSSR MRIG ATPRK++G+ Q G NGT ++ E D NTTIFVGGLD +V+DEDL+QPF+++GEIVSVKIPVGKGCGFVQF NR NAEEAL+KLNGT IGKQTVRLSWGRNPANKQ R +GN W YYG Y+GYGY + P+ DP +Y AA YP+YG HQQQVS
Sbjct: 40 QPKTSPTP--PPHW--MRYPPTVIIPHQMM----YAPPPFPPYH--QYPNHHHLHHQSRGNKHQNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQGGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYMV-PQPDPRMYPAA-PYYPMYGGHQQQVS 432
BLAST of rna-XM_014649074.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SX80|R47CP_ARATH (Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C' PE=2 SV=1) HSP 1 Score: 478.404 bits (1230), Expect = 6.561e-167 Identity = 243/361 (67.31%), Postives = 283/361 (78.39%), Query Frame = 0
Query: 67 HHQYAPPHVPHQQ-----HQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGE--ISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKG-SDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGG--QSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS 417
+HQY H H Q HQN +GENKT+W+GDL +WMDE YL+ F S E I S+KVIRNK G SEGYGFVEF SH A+KVLQ + G MPNT+Q FRLNWASFSTG+K +N PDLSIFVGDLA DV+D+LLHETF+ +PSVKAAKVV DANTGRSKGYGFVRFGD++ER++AMT+MNGV CSSR MRIG ATPRK++G+ Q G +G ++SE D+ NTTIFVGGLD +V+DEDL+QPFS++GEIVSVKIPVGKGCGFVQF NR NAEEAL+KLNGT IGKQTVRLSWGRNPANKQ R +GN W YYG Y+GYGY + P+ DP +Y AA YP+YG HQQQVS
Sbjct: 76 YHQYPNHHHFHHQSRGNKHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQGGYMPSGAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYMV-PQPDPRMYPAA-PYYPMYGGHQQQVS 434
BLAST of rna-XM_014649074.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LEB3|RBP47_NICPL (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1) HSP 1 Score: 466.463 bits (1199), Expect = 2.258e-162 Identity = 241/400 (60.25%), Postives = 285/400 (71.25%), Query Frame = 0
Query: 34 QQWLPMQYPAAMVMPHHMLPPQHYAPPPYMPFHHHQYAPPHVPHQQHQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQ----------GGQSNGTS---SQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYA--AAYGAYP-LYGAHQQQVS 417
QQW+ MQYPAA + + P Y Q Q SS +NKT+WIGDL WMDE+YLH CF+ GE+ S+K+IRNKQTG SE YGFVEF +HA AEKVLQ+Y G +MPNTEQ FRLNWA FSTG+K ++ D SIFVGDLA+DVTD++L +TFAS +PS+K AKVV DANTG SKGYGFVRFGD+SERS+AMT+MNGVYCSSR MRIG ATP+K S H Q G SNG + SQS+ DS+NTTIFVGGLD V+DE+LRQ F+Q+GE+VSVKIP GKGCGFVQF++R++A+EA+QKL+G IGKQ VRLSWGR+PANKQ R D G+ W G Y G Y GYGY D +YA AAYGA YG HQQ VS
Sbjct: 32 QQWMAMQYPAAAMAMQQQMMYGQQYMPYYQQHQQQQKMQQSPTQIQS---SSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAHEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDSGSQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAAYGASSNRYGNHQQPVS 428
BLAST of rna-XM_014649074.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q0WW84|RB47B_ARATH (Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B PE=1 SV=1) HSP 1 Score: 429.869 bits (1104), Expect = 7.211e-148 Identity = 233/414 (56.28%), Postives = 289/414 (69.81%), Query Frame = 0
Query: 1 MQQSNGSDSSLQSQST----EQNVPRQPAGSPAVARPQQWLP-MQYP-----------AAMVMPHHMLPPQHYAPPPYMPFH--HHQYAP----PHVPHQQHQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGS-DNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQ-----------GGQSNGT---SSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAY 377
MQ +NGSDS+L + +Q P + QQW+ MQYP ++ PH +P Y PY H HQY H H+ GS + KT+W+GDL HWMDE YLH CF+ TGE+SS+KVIRNK T SEGYGFVEF S A AE+VLQNY+G +MPN++Q FR+NWASFSTG+K + +N PDLS+FVGDL+ DVTD LLHETF+ +PSVK+AKVV D+NTGRSKGYGFVRFGD++ERS+A+T+MNG YCS+R MR+G ATP+++ + Q G SNG+ SQS+ +STN TIFVGG+DP+V DEDLRQPFSQ+GE+VSVKIPVGKGCGFVQFA+R +AE+A++ LNGT IGK TVRLSWGR+P NKQ+R D G W G Y
Sbjct: 1 MQTTNGSDSTLATSGATPPNQQTPPPPQQWQQQQQQQQQWMAAMQYPPAAAMMMMQQQQMLMYPHQYVP---YNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWRGDSGQQWNGGY 410
BLAST of rna-XM_014649074.2 vs. UniProtKB/Swiss-Prot
Match: sp|F4I3B3|RB47A_ARATH (Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A PE=2 SV=1) HSP 1 Score: 417.157 bits (1071), Expect = 1.204e-142 Identity = 211/338 (62.43%), Postives = 258/338 (76.33%), Query Frame = 0
Query: 81 QNGSSGEN-KTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDK-GSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQ---------GGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYP 407
+ GS G++ KT+W+GDL HWMDE YLH CF+ T E+SS+KVIRNKQT SEGYGFVEF S + AE+ LQ+++G+ MPN EQ FRLNWASFSTG+K S+N PDLSIFVGDLA DV+D++L ETFA +PSVK AKVV D+NTGRSKGYGFVRFGD++ERS+AMT+MNG +CSSR MR+G ATP++++ + Q G G S S+ +S N+TIFVGGLD +V++EDL QPFS +GE+VSVKIPVGKGCGFVQFANR +AEEA+ LNGT IGK TVRLSWGR+P NKQ+R D GN W G Y Y+ GYA D ++YA A A P
Sbjct: 110 RGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP-NKQWRSDSGNQWNGGYSRGQGYNN-GYA---NQDSNMYATAAAAVP 442
BLAST of rna-XM_014649074.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LEB4|RBP45_NICPL (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP45 PE=1 SV=1) HSP 1 Score: 371.318 bits (952), Expect = 3.305e-125 Identity = 193/333 (57.96%), Postives = 234/333 (70.27%), Query Frame = 0
Query: 83 GSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQ-SNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQ 414
G+ E +++WIGDL +WMDENYL CF TGE+ S KVIRNKQTG SEGYGF+EF SHA AE +LQ Y G LMPN EQ FR+NWAS G++ D+ + +IFVGDLAADVTD +L ETF SV+ SV+ AKVV D TGRSKGYGFV+F D+SE+ +AMT+MNGV CS+RPMRIG A +K G PQ N ++Q E+D NTTIFVGGLDP V++E LRQ FS YGE+V VKI GK CGFVQF R +AE+AL LNGT +G Q++RLSWGR+P++KQ GAYYG PP DP++Y YG YP Y +QQ
Sbjct: 78 GNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQSEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSA-EHTIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVLCSTRPMRIGPAANKKPVGTPQKATYQNPQATQGESDPNNTTIFVGGLDPTVAEEHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGRSPSSKQTDQTQWGGSGGAYYGYGQGYEAYGYAPPAQDPNMY---YGNYPGYANYQQ 406
BLAST of rna-XM_014649074.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SAB3|RB45B_ARATH (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B PE=1 SV=1) HSP 1 Score: 364.77 bits (935), Expect = 1.224e-122 Identity = 200/376 (53.19%), Postives = 252/376 (67.02%), Query Frame = 0
Query: 40 QYPAAMVMPHHMLPPQHY--------------APPPYMPFHHHQYAPPHVPHQQHQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPN-TEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKS-SGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYG--APIYDGYGYALPPRHDPS 397
Q P ++PHH PP APPP ++ APP V Q ++ E +T+WIGDL +WMDEN+L+ CFA TGE+ S KVIRNKQTG EGYGF+EF SHA AE+VLQ + +P+ +Q FRLNWAS S+GDK D+ PD +IFVGDLAADVTD +L ETF + +PSVK AKVV D TGR+KGYGFVRF D+SE+ +AMT+MNGV CS+RPMRIG A +K +G QS+ ++ D NTT+FVGGLD +V+D+ L+ FSQYGEIV VKIP GK CGFVQF+ ++ AEEAL+ LNG +G TVRLSWGR+P+NKQ G+P + YYG + YGY +P DP+
Sbjct: 4 QPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPPPPQMWNPQAAAPPSV-----QPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDK-RDDSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQ----SGDP-SQFYYGGYGQGQEQYGYTMP--QDPN 366
BLAST of rna-XM_014649074.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q0J9Y2|RBPL_ORYSJ (RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=1) HSP 1 Score: 352.829 bits (904), Expect = 1.160e-117 Identity = 176/287 (61.32%), Postives = 218/287 (75.96%), Query Frame = 0
Query: 87 ENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPW 373
E KT+WIGDL WMDE+Y++ CFA+TGE+ S+K+IR+KQ+G +GYGFVEF S A A+++LQ Y G +MPN E FRLNWAS G+K D+ PD +IFVGDLAADVTD LL ETF +PSVK AKVV D T RSKGYGFV+FGD +E+++AMT+MNG+ CSSRPMRIG A +K++G Q N +QSE D NTTIFVGGLDPNV+++ L+Q F+ YGE+V VKIPVGK CGFVQ+ NR +AE+AL L GT IG Q VRLSWGR+ +NKQ + D N W
Sbjct: 88 EVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQTYNGQMMPNVEMVFRLNWAS--AGEK-RDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGV-QERVPNAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQPQHD-SNQW 369
BLAST of rna-XM_014649074.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q93W34|RP45C_ARATH (Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana OX=3702 GN=RBP45C PE=2 SV=1) HSP 1 Score: 350.903 bits (899), Expect = 4.726e-117 Identity = 179/317 (56.47%), Postives = 223/317 (70.35%), Query Frame = 0
Query: 83 GSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMD---FGNPWTGAYYGAPIYDGYGYALPPRHDP 396
GS+GE +++WIGDL WMDENYL F TGE ++ KVIRNKQ G SEGYGF+EF +HATAE+ LQ Y G MP++EQAFRLNWA G++ P+ ++FVGDLA DVTD +L ETF +V+ SVK AKVV D TGRSKGYGFVRF D+SE+ +AMT+MNG YCSSRPMR G A +K N + E+D TNTTIFVG +D +V+++DL+ F Q+GE+V VKIP GK CGFVQ+ANR AE+AL LNGT +G Q++RLSWGR+P+NKQ + D +G Y Y+ YGYA PP DP
Sbjct: 74 GSAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQPDQAQYGGGGGYYGYPPQGYEAYGYA-PPPQDP 389
BLAST of rna-XM_014649074.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FPJ8|RB45A_ARATH (Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana OX=3702 GN=RBP45A PE=2 SV=1) HSP 1 Score: 344.739 bits (883), Expect = 4.697e-115 Identity = 187/340 (55.00%), Postives = 230/340 (67.65%), Query Frame = 0
Query: 64 PFHHHQYAPPHVPHQQHQN-GSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKG-SDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIG-AATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAP--IYDGYGYAL-PPRHDPS 397
P HQY QN GS+ + K++WIGDL WMDENY+ FA +GE +S KVIRNK TG SEGYGF+EF SH+ AE+VLQ Y G MP+TEQ FRLNWA G+K PD +IFVGDLA +VTD +L +TF +V+ SVK AKVV D TGRSKGYGFVRF D++E+ +AMT+MNG YCS+RPMRIG AA P Q+ ++ + D NTTIFVGGLD NV+D++L+ F Q+GE++ VKIP GK CGFVQ+AN+ +AE AL LNGT +G Q++RLSWGR+P NKQ N G YYG P GYGYA PP DP+
Sbjct: 40 PLGQHQYGIGS------QNPGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSP-NKQSDQAQWN--GGGYYGYPPQPQGGYGYAAQPPTQDPN 370
BLAST of rna-XM_014649074.2 vs. Araport11
Match: AT1G47490.1 (| RNA-binding protein 47C | Chr1:17424801-17427182 FORWARD LENGTH=432 | 201606) HSP 1 Score: 509.99 bits (1312), Expect = 2.119e-180 Identity = 263/405 (64.94%), Postives = 309/405 (76.30%), Query Frame = 0
Query: 23 QPAGSPAVARPQQWLPMQYPAAMVMPHHMLPPQHYAPPPYMPFHHHQYAPPHVPHQQ-----HQNGSSGENKTVWIGDLHHWMDENYLHRCFAS--TGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKG-SDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGG--QSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS 417
QP SP P W M+YP +++PH M+ YAPPP+ P+H QY H H Q HQN +GENKT+W+GDLHHWMDE YL+ FAS EI S+KVIRNK GLSEGYGFVEF SH A+KVL+ + G MPNT+Q FRLNWASFSTG+K +N PDLSIFVGDL+ DV+D+LLHETF+ +PSVKAAKVV DANTGRSKGYGFVRFGD++ER++AMT+MNGV CSSR MRIG ATPRK++G+ Q G NGT ++ E D NTTIFVGGLD +V+DEDL+QPF+++GEIVSVKIPVGKGCGFVQF NR NAEEAL+KLNGT IGKQTVRLSWGRNPANKQ R +GN W YYG Y+GYGY + P+ DP +Y AA YP+YG HQQQVS
Sbjct: 40 QPKTSPTP--PPHW--MRYPPTVIIPHQMM----YAPPPFPPYH--QYPNHHHLHHQSRGNKHQNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQGGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYMV-PQPDPRMYPAA-PYYPMYGGHQQQVS 432
BLAST of rna-XM_014649074.2 vs. Araport11
Match: AT1G47500.1 (| RNA-binding protein 47C' | Chr1:17432682-17434805 FORWARD LENGTH=434 | 201606) HSP 1 Score: 478.404 bits (1230), Expect = 6.713e-168 Identity = 243/361 (67.31%), Postives = 283/361 (78.39%), Query Frame = 0
Query: 67 HHQYAPPHVPHQQ-----HQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGE--ISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKG-SDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGG--QSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS 417
+HQY H H Q HQN +GENKT+W+GDL +WMDE YL+ F S E I S+KVIRNK G SEGYGFVEF SH A+KVLQ + G MPNT+Q FRLNWASFSTG+K +N PDLSIFVGDLA DV+D+LLHETF+ +PSVKAAKVV DANTGRSKGYGFVRFGD++ER++AMT+MNGV CSSR MRIG ATPRK++G+ Q G +G ++SE D+ NTTIFVGGLD +V+DEDL+QPFS++GEIVSVKIPVGKGCGFVQF NR NAEEAL+KLNGT IGKQTVRLSWGRNPANKQ R +GN W YYG Y+GYGY + P+ DP +Y AA YP+YG HQQQVS
Sbjct: 76 YHQYPNHHHFHHQSRGNKHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQGGYMPSGAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYMV-PQPDPRMYPAA-PYYPMYGGHQQQVS 434
BLAST of rna-XM_014649074.2 vs. Araport11
Match: AT3G19130.1 (| RNA-binding protein 47B | Chr3:6611398-6613823 REVERSE LENGTH=435 | 201606) HSP 1 Score: 429.869 bits (1104), Expect = 7.378e-149 Identity = 233/414 (56.28%), Postives = 289/414 (69.81%), Query Frame = 0
Query: 1 MQQSNGSDSSLQSQST----EQNVPRQPAGSPAVARPQQWLP-MQYP-----------AAMVMPHHMLPPQHYAPPPYMPFH--HHQYAP----PHVPHQQHQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGS-DNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQ-----------GGQSNGT---SSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAY 377
MQ +NGSDS+L + +Q P + QQW+ MQYP ++ PH +P Y PY H HQY H H+ GS + KT+W+GDL HWMDE YLH CF+ TGE+SS+KVIRNK T SEGYGFVEF S A AE+VLQNY+G +MPN++Q FR+NWASFSTG+K + +N PDLS+FVGDL+ DVTD LLHETF+ +PSVK+AKVV D+NTGRSKGYGFVRFGD++ERS+A+T+MNG YCS+R MR+G ATP+++ + Q G SNG+ SQS+ +STN TIFVGG+DP+V DEDLRQPFSQ+GE+VSVKIPVGKGCGFVQFA+R +AE+A++ LNGT IGK TVRLSWGR+P NKQ+R D G W G Y
Sbjct: 1 MQTTNGSDSTLATSGATPPNQQTPPPPQQWQQQQQQQQQWMAAMQYPPAAAMMMMQQQQMLMYPHQYVP---YNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWRGDSGQQWNGGY 410
BLAST of rna-XM_014649074.2 vs. Araport11
Match: AT1G49600.1 (| RNA-binding protein 47A | Chr1:18357236-18360150 REVERSE LENGTH=445 | 201606) HSP 1 Score: 417.157 bits (1071), Expect = 1.232e-143 Identity = 211/338 (62.43%), Postives = 258/338 (76.33%), Query Frame = 0
Query: 81 QNGSSGEN-KTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDK-GSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQ---------GGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYP 407
+ GS G++ KT+W+GDL HWMDE YLH CF+ T E+SS+KVIRNKQT SEGYGFVEF S + AE+ LQ+++G+ MPN EQ FRLNWASFSTG+K S+N PDLSIFVGDLA DV+D++L ETFA +PSVK AKVV D+NTGRSKGYGFVRFGD++ERS+AMT+MNG +CSSR MR+G ATP++++ + Q G G S S+ +S N+TIFVGGLD +V++EDL QPFS +GE+VSVKIPVGKGCGFVQFANR +AEEA+ LNGT IGK TVRLSWGR+P NKQ+R D GN W G Y Y+ GYA D ++YA A A P
Sbjct: 110 RGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP-NKQWRSDSGNQWNGGYSRGQGYNN-GYA---NQDSNMYATAAAAVP 442
BLAST of rna-XM_014649074.2 vs. Araport11
Match: AT1G49600.3 (| RNA-binding protein 47A | Chr1:18357827-18360150 REVERSE LENGTH=450 | 201606) HSP 1 Score: 401.749 bits (1031), Expect = 1.288e-137 Identity = 195/300 (65.00%), Postives = 240/300 (80.00%), Query Frame = 0
Query: 81 QNGSSGEN-KTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDK-GSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQ---------GGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDF 369
+ GS G++ KT+W+GDL HWMDE YLH CF+ T E+SS+KVIRNKQT SEGYGFVEF S + AE+ LQ+++G+ MPN EQ FRLNWASFSTG+K S+N PDLSIFVGDLA DV+D++L ETFA +PSVK AKVV D+NTGRSKGYGFVRFGD++ERS+AMT+MNG +CSSR MR+G ATP++++ + Q G G S S+ +S N+TIFVGGLD +V++EDL QPFS +GE+VSVKIPVGKGCGFVQFANR +AEEA+ LNGT IGK TVRLSWGR+P NKQ + +F
Sbjct: 110 RGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP-NKQVQENF 408
BLAST of rna-XM_014649074.2 vs. Araport11
Match: AT1G49600.2 (| RNA-binding protein 47A | Chr1:18357827-18360150 REVERSE LENGTH=450 | 201606) HSP 1 Score: 401.749 bits (1031), Expect = 1.288e-137 Identity = 195/300 (65.00%), Postives = 240/300 (80.00%), Query Frame = 0
Query: 81 QNGSSGEN-KTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDK-GSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQ---------GGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDF 369
+ GS G++ KT+W+GDL HWMDE YLH CF+ T E+SS+KVIRNKQT SEGYGFVEF S + AE+ LQ+++G+ MPN EQ FRLNWASFSTG+K S+N PDLSIFVGDLA DV+D++L ETFA +PSVK AKVV D+NTGRSKGYGFVRFGD++ERS+AMT+MNG +CSSR MR+G ATP++++ + Q G G S S+ +S N+TIFVGGLD +V++EDL QPFS +GE+VSVKIPVGKGCGFVQFANR +AEEA+ LNGT IGK TVRLSWGR+P NKQ + +F
Sbjct: 110 RGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP-NKQVQENF 408
BLAST of rna-XM_014649074.2 vs. Araport11
Match: AT1G11650.2 (| RNA-binding (RRM/RBD/RNP motifs) family protein | Chr1:3914895-3917941 FORWARD LENGTH=405 | 201606) HSP 1 Score: 364.77 bits (935), Expect = 1.252e-123 Identity = 200/376 (53.19%), Postives = 252/376 (67.02%), Query Frame = 0
Query: 40 QYPAAMVMPHHMLPPQHY--------------APPPYMPFHHHQYAPPHVPHQQHQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPN-TEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKS-SGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYG--APIYDGYGYALPPRHDPS 397
Q P ++PHH PP APPP ++ APP V Q ++ E +T+WIGDL +WMDEN+L+ CFA TGE+ S KVIRNKQTG EGYGF+EF SHA AE+VLQ + +P+ +Q FRLNWAS S+GDK D+ PD +IFVGDLAADVTD +L ETF + +PSVK AKVV D TGR+KGYGFVRF D+SE+ +AMT+MNGV CS+RPMRIG A +K +G QS+ ++ D NTT+FVGGLD +V+D+ L+ FSQYGEIV VKIP GK CGFVQF+ ++ AEEAL+ LNG +G TVRLSWGR+P+NKQ G+P + YYG + YGY +P DP+
Sbjct: 4 QPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPPPPQMWNPQAAAPPSV-----QPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDK-RDDSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQ----SGDP-SQFYYGGYGQGQEQYGYTMP--QDPN 366
BLAST of rna-XM_014649074.2 vs. Araport11
Match: AT4G27000.1 (| RNA-binding (RRM/RBD/RNP motifs) family protein | Chr4:13554983-13557763 REVERSE LENGTH=415 | 201606) HSP 1 Score: 350.903 bits (899), Expect = 4.835e-118 Identity = 179/317 (56.47%), Postives = 223/317 (70.35%), Query Frame = 0
Query: 83 GSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMD---FGNPWTGAYYGAPIYDGYGYALPPRHDP 396
GS+GE +++WIGDL WMDENYL F TGE ++ KVIRNKQ G SEGYGF+EF +HATAE+ LQ Y G MP++EQAFRLNWA G++ P+ ++FVGDLA DVTD +L ETF +V+ SVK AKVV D TGRSKGYGFVRF D+SE+ +AMT+MNG YCSSRPMR G A +K N + E+D TNTTIFVG +D +V+++DL+ F Q+GE+V VKIP GK CGFVQ+ANR AE+AL LNGT +G Q++RLSWGR+P+NKQ + D +G Y Y+ YGYA PP DP
Sbjct: 74 GSAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQPDQAQYGGGGGYYGYPPQGYEAYGYA-PPPQDP 389
BLAST of rna-XM_014649074.2 vs. Araport11
Match: AT5G54900.1 (| RNA-binding protein 45A | Chr5:22295412-22298126 FORWARD LENGTH=387 | 201606) HSP 1 Score: 344.739 bits (883), Expect = 4.805e-116 Identity = 187/340 (55.00%), Postives = 230/340 (67.65%), Query Frame = 0
Query: 64 PFHHHQYAPPHVPHQQHQN-GSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKG-SDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIG-AATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAP--IYDGYGYAL-PPRHDPS 397
P HQY QN GS+ + K++WIGDL WMDENY+ FA +GE +S KVIRNK TG SEGYGF+EF SH+ AE+VLQ Y G MP+TEQ FRLNWA G+K PD +IFVGDLA +VTD +L +TF +V+ SVK AKVV D TGRSKGYGFVRF D++E+ +AMT+MNG YCS+RPMRIG AA P Q+ ++ + D NTTIFVGGLD NV+D++L+ F Q+GE++ VKIP GK CGFVQ+AN+ +AE AL LNGT +G Q++RLSWGR+P NKQ N G YYG P GYGYA PP DP+
Sbjct: 40 PLGQHQYGIGS------QNPGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSP-NKQSDQAQWN--GGGYYGYPPQPQGGYGYAAQPPTQDPN 370
BLAST of rna-XM_014649074.2 vs. Araport11
Match: AT5G19350.2 (| RNA-binding (RRM/RBD/RNP motifs) family protein | Chr5:6518978-6521295 FORWARD LENGTH=421 | 201606) HSP 1 Score: 343.199 bits (879), Expect = 5.711e-115 Identity = 190/378 (50.26%), Postives = 235/378 (62.17%), Query Frame = 0
Query: 45 MVMPHHMLPPQHYAPPPYMPFHHHQYAPPHVPHQQHQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQSNGTSSQS------------EADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFG-NPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLY 409
M M H PPQ PP +HH Q + E +T+WIGDL +W+DENYL CF+ TGE+ S+KVIRNK TG EGYGF+EF SHA AE+ LQ Y G MP TE FRLNWASF +G K D PD SIFVGDLA DVTD LL ETF + SV+ AKVV D +TGRSKGYGFV+F ++SER++AM +MNG+YCS+RPMRI AATP+K+ G Q + T + E+D T TTI V LD NV++E+L++ FSQ GE++ VKIP KG G+VQF R +AEEA+Q++ G IG+Q VR+SW +NP + N W G Y YD Y Y DPS+YA YP Y
Sbjct: 1 MAMMH---PPQ----PPQGSYHHPQ--------------TLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQK-VDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGVQQQYVTKVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPGQDGWVTQADPNQWNGYYGYGQGYDAYAYG--ATQDPSVYAYGGYGYPQY 354
BLAST of rna-XM_014649074.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UEU9|A0A1S3UEU9_VIGRR (polyadenylate-binding protein RBP47C-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106764723 PE=4 SV=1) HSP 1 Score: 870.922 bits (2249), Expect = 0.000e+0 Identity = 417/417 (100.00%), Postives = 417/417 (100.00%), Query Frame = 0
Query: 1 MQQSNGSDSSLQSQSTEQNVPRQPAGSPAVARPQQWLPMQYPAAMVMPHHMLPPQHYAPPPYMPFHHHQYAPPHVPHQQHQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS 417
MQQSNGSDSSLQSQSTEQNVPRQPAGSPAVARPQQWLPMQYPAAMVMPHHMLPPQHYAPPPYMPFHHHQYAPPHVPHQQHQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS
Sbjct: 1 MQQSNGSDSSLQSQSTEQNVPRQPAGSPAVARPQQWLPMQYPAAMVMPHHMLPPQHYAPPPYMPFHHHQYAPPHVPHQQHQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS 417
BLAST of rna-XM_014649074.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TT24|A0A0L9TT24_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g330400 PE=4 SV=1) HSP 1 Score: 849.736 bits (2194), Expect = 0.000e+0 Identity = 409/417 (98.08%), Postives = 410/417 (98.32%), Query Frame = 0
Query: 1 MQQSNGSDSSLQSQSTEQNVPRQPAGSPAVARPQQWLPMQYPAAMVMPHHMLPPQHYAPPPYMPFHHHQYAPPHVPHQQHQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS 417
MQQSNGSDSSLQSQS EQNVP QPAGSPAVARPQQWLPMQYPAAMVMPHHMLPPQHYAPPPYMPFHHHQYA PHVPHQQHQNGSS ENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYS ATAEKVLQNYAG+LMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGA IYDGYGYALPPRHDPSIY AAYGAYPLYGAHQQQVS
Sbjct: 1 MQQSNGSDSSLQSQSAEQNVPLQPAGSPAVARPQQWLPMQYPAAMVMPHHMLPPQHYAPPPYMPFHHHQYASPHVPHQQHQNGSS-ENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSRATAEKVLQNYAGMLMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGASIYDGYGYALPPRHDPSIYTAAYGAYPLYGAHQQQVS 416
BLAST of rna-XM_014649074.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RQ30|A0A0S3RQ30_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G275000 PE=4 SV=1) HSP 1 Score: 847.04 bits (2187), Expect = 0.000e+0 Identity = 407/415 (98.07%), Postives = 408/415 (98.31%), Query Frame = 0
Query: 1 MQQSNGSDSSLQSQSTEQNVPRQPAGSPAVARPQQWLPMQYPAAMVMPHHMLPPQHYAPPPYMPFHHHQYAPPHVPHQQHQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQ 415
MQQSNGSDSSLQSQS EQNVP QPAGSPAVARPQQWLPMQYPAAMVMPHHMLPPQHYAPPPYMPFHHHQYA PHVPHQQHQNGSS ENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYS ATAEKVLQNYAG+LMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGA IYDGYGYALPPRHDPSIY AAYGAYPLYGAHQQQ
Sbjct: 1 MQQSNGSDSSLQSQSAEQNVPLQPAGSPAVARPQQWLPMQYPAAMVMPHHMLPPQHYAPPPYMPFHHHQYASPHVPHQQHQNGSS-ENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSRATAEKVLQNYAGMLMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGASIYDGYGYALPPRHDPSIYTAAYGAYPLYGAHQQQ 414
BLAST of rna-XM_014649074.2 vs. UniProtKB/TrEMBL
Match: tr|V7CRK3|V7CRK3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G019600g PE=4 SV=1) HSP 1 Score: 846.655 bits (2186), Expect = 0.000e+0 Identity = 409/417 (98.08%), Postives = 411/417 (98.56%), Query Frame = 0
Query: 1 MQQSNGSDSSLQSQSTEQNVPRQPAGSPAVARPQQWLPMQYPAAMVMPHHMLPPQHYAPPPYMPFHHHQYAPPHVPHQQHQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS 417
MQQSNGSDSSLQSQS EQNVPRQPA SPAVARPQQWLPMQYP AMVMPHHMLPPQHYAPP Y+PFHHHQYAPPHVPHQ HQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDD+ERSQAMTQMNGVYCSSRPMRIGAATPRKSSGH QGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS
Sbjct: 1 MQQSNGSDSSLQSQSAEQNVPRQPAASPAVARPQQWLPMQYPTAMVMPHHMLPPQHYAPP-YVPFHHHQYAPPHVPHQ-HQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHQQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS 415
BLAST of rna-XM_014649074.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MBX9|A0A4D6MBX9_VIGUN (Nucleolysin TIA-1/TIAR OS=Vigna unguiculata OX=3917 GN=DEO72_LG7g210 PE=4 SV=1) HSP 1 Score: 845.884 bits (2184), Expect = 0.000e+0 Identity = 406/423 (95.98%), Postives = 412/423 (97.40%), Query Frame = 0
Query: 1 MQQSNGSDSSLQSQS------TEQNVPRQPAGSPAVARPQQWLPMQYPAAMVMPHHMLPPQHYAPPPYMPFHHHQYAPPHVPHQQHQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS 417
M QSNGSDSSLQSQS TEQNVPRQPAGSPA+ARPQQWLP+QYPAA+VMPHHMLPPQHYAPPPYM FHHHQYAPPHVPHQQHQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYS ATAEKVLQNY+GI MPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDD+ERSQAMTQMNGVYCSSRPMRIGAATPRKSSGH QGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEAL+KLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS
Sbjct: 1 MHQSNGSDSSLQSQSQSQSQSTEQNVPRQPAGSPAMARPQQWLPLQYPAAVVMPHHMLPPQHYAPPPYMSFHHHQYAPPHVPHQQHQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSRATAEKVLQNYSGIAMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHQQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALEKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS 423
BLAST of rna-XM_014649074.2 vs. UniProtKB/TrEMBL
Match: tr|T2DLH7|T2DLH7_PHAVU (RNA binding post-transcriptional regulator csx1 like protein OS=Phaseolus vulgaris OX=3885 PE=2 SV=1) HSP 1 Score: 822.002 bits (2122), Expect = 0.000e+0 Identity = 395/417 (94.72%), Postives = 401/417 (96.16%), Query Frame = 0
Query: 1 MQQSNGSDSSLQSQSTEQNVPRQPAGSPAVARPQQWLPMQYPAAMVMPHHMLPPQHYAPPPYMPFHHHQYAPPHVPHQQHQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS 417
MQQSNGSDSSLQSQS EQNVPRQPA SPAVARPQQWLPMQYP AMVMPHHMLPPQHYAPP Y+PFHHHQYAPPHVPHQQHQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEK+LQ YAGIL P +QAFRLN FS G KGS+NVPDL IFVGDLAADVTDSLLHETFASV+P VKAAKVVFDANTGRSKGYGFVRFGDD+ERSQAMTQMNGVYCSSRPMRIGAATPRKSSGH QGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS
Sbjct: 1 MQQSNGSDSSLQSQSAEQNVPRQPAASPAVARPQQWLPMQYPTAMVMPHHMLPPQHYAPP-YVPFHHHQYAPPHVPHQQHQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKILQKYAGILRPKKKQAFRLNGVPFSKGKKGSNNVPDLFIFVGDLAADVTDSLLHETFASVYPLVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHQQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS 416
BLAST of rna-XM_014649074.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445GBB0|A0A445GBB0_GLYSO (Polyadenylate-binding protein RBP47C isoform A OS=Glycine soja OX=3848 GN=D0Y65_046891 PE=4 SV=1) HSP 1 Score: 778.474 bits (2009), Expect = 0.000e+0 Identity = 379/419 (90.45%), Postives = 394/419 (94.03%), Query Frame = 0
Query: 1 MQQSNGSDSSLQSQSTEQNVPRQPAGSPAVARPQQWLPMQYPAA--MVMPHHMLPPQHYAPPPYMPFHHHQYAPPHVPHQQHQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS 417
MQQSNGSDS+ + EQ+ P P SPAVARPQQW+PMQYPAA MVMPHHMLPPQHYAPPPY+P+HH QYA P QHQNGS GENKT+WIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPN EQ FRLNWA+FSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASV+PSVKAAKVVFDANTGRSKGYGFVRFGDD+ER+QAMTQMNGVYCSSRPMRIGAATPRKSSGH QGG SNGT++QSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFG+PWTGAYYGAP+YDGYGYALPPRHDPSIYAAAYGAYPLYG HQQQVS
Sbjct: 1 MQQSNGSDSTT---TMEQSAPPPPRQSPAVARPQQWVPMQYPAAAAMVMPHHMLPPQHYAPPPYVPYHH-QYAA--QPQHQHQNGSGGENKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNAEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTQMNGVYCSSRPMRIGAATPRKSSGHQQGGLSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGSPWTGAYYGAPMYDGYGYALPPRHDPSIYAAAYGAYPLYGGHQQQVS 413
BLAST of rna-XM_014649074.2 vs. UniProtKB/TrEMBL
Match: tr|I1MXR5|I1MXR5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100801446 PE=4 SV=2) HSP 1 Score: 778.474 bits (2009), Expect = 0.000e+0 Identity = 379/419 (90.45%), Postives = 394/419 (94.03%), Query Frame = 0
Query: 1 MQQSNGSDSSLQSQSTEQNVPRQPAGSPAVARPQQWLPMQYPAA--MVMPHHMLPPQHYAPPPYMPFHHHQYAPPHVPHQQHQNGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS 417
MQQSNGSDS+ + EQ+ P P SPAVARPQQW+PMQYPAA MVMPHHMLPPQHYAPPPY+P+HH QYA P QHQNGS GENKT+WIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPN EQ FRLNWA+FSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASV+PSVKAAKVVFDANTGRSKGYGFVRFGDD+ER+QAMTQMNGVYCSSRPMRIGAATPRKSSGH QGG SNGT++QSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFG+PWTGAYYGAP+YDGYGYALPPRHDPSIYAAAYGAYPLYG HQQQVS
Sbjct: 1 MQQSNGSDSTT---TMEQSAPPPPRQSPAVARPQQWVPMQYPAAAAMVMPHHMLPPQHYAPPPYVPYHH-QYAA--QPQHQHQNGSGGENKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNAEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTQMNGVYCSSRPMRIGAATPRKSSGHQQGGLSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGSPWTGAYYGAPMYDGYGYALPPRHDPSIYAAAYGAYPLYGGHQQQVS 413
BLAST of rna-XM_014649074.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445H315|A0A445H315_GLYSO (Polyadenylate-binding protein RBP47C isoform A OS=Glycine soja OX=3848 GN=D0Y65_038027 PE=4 SV=1) HSP 1 Score: 771.926 bits (1992), Expect = 0.000e+0 Identity = 386/430 (89.77%), Postives = 399/430 (92.79%), Query Frame = 0
Query: 1 MQQSNGSDSSLQSQSTEQNVPRQPAGSPAVARPQQWLPMQYPAA-MVMPHHMLPPQHYAPPPYMPFHHH----QYAPPHVPHQQHQ--------NGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS 417
MQQSNGSDSS +TEQ P P SPAVARPQQWLPMQYPAA MVMPHHMLPPQHYAPPPY+PFHHH QYA PHVP+Q Q NGS GENKT+WIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQ FRLNWA+FSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASV+PSVKAAKVVFDANTGRSKGYGFVRFGDD++R+QAMTQMNGVYCSSRPMRIGAATPRKSSGH QGGQSNGT++QSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGT+IGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAP+YDGYGYAL PRHDPSIYAAAYGAYPLYG HQQQVS
Sbjct: 1 MQQSNGSDSS----TTEQKAP-PPRQSPAVARPQQWLPMQYPAAAMVMPHHMLPPQHYAPPPYVPFHHHHHHHQYAAPHVPNQHQQQQQHHHHQNGSGGENKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNQRTQAMTQMNGVYCSSRPMRIGAATPRKSSGHQQGGQSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTSIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPMYDGYGYALTPRHDPSIYAAAYGAYPLYGGHQQQVS 425
BLAST of rna-XM_014649074.2 vs. UniProtKB/TrEMBL
Match: tr|I1M8J4|I1M8J4_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100819523 PE=4 SV=1) HSP 1 Score: 771.926 bits (1992), Expect = 0.000e+0 Identity = 386/430 (89.77%), Postives = 399/430 (92.79%), Query Frame = 0
Query: 1 MQQSNGSDSSLQSQSTEQNVPRQPAGSPAVARPQQWLPMQYPAA-MVMPHHMLPPQHYAPPPYMPFHHH----QYAPPHVPHQQHQ--------NGSSGENKTVWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQAFRLNWASFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHPQGGQSNGTSSQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYGAHQQQVS 417
MQQSNGSDSS +TEQ P P SPAVARPQQWLPMQYPAA MVMPHHMLPPQHYAPPPY+PFHHH QYA PHVP+Q Q NGS GENKT+WIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQ FRLNWA+FSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASV+PSVKAAKVVFDANTGRSKGYGFVRFGDD++R+QAMTQMNGVYCSSRPMRIGAATPRKSSGH QGGQSNGT++QSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGT+IGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAP+YDGYGYAL PRHDPSIYAAAYGAYPLYG HQQQVS
Sbjct: 1 MQQSNGSDSS----TTEQKAP-PPRQSPAVARPQQWLPMQYPAAAMVMPHHMLPPQHYAPPPYVPFHHHHHHHQYAAPHVPNQHQQQQQHHHHQNGSGGENKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNQRTQAMTQMNGVYCSSRPMRIGAATPRKSSGHQQGGQSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTSIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPMYDGYGYALTPRHDPSIYAAAYGAYPLYGGHQQQVS 425 The following BLAST results are available for this feature:
BLAST of rna-XM_014649074.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot) Total hits: 10
BLAST of rna-XM_014649074.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11) Total hits: 10
BLAST of rna-XM_014649074.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_014649074.2_VrVC1973A-SNU_v1 ID=rna-XM_014649074.2_VrVC1973A-SNU_v1; Name=rna-XM_014649074.2; organism=Vigna radiata; type=mRNA; length=1254bpback to top protein sequence of rna-XM_014649074.2_VrVC1973A-SNU_v1 >rna-XM_014649074.2_VrVC1973A-SNU_v1 ID=rna-XM_014649074.2_VrVC1973A-SNU_v1; Name=rna-XM_014649074.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=417bpback to top mRNA from alignment at chr06:35503276..35509071+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_014649074.2_VrVC1973A-SNU_v1 ID=rna-XM_014649074.2_VrVC1973A-SNU_v1; Name=rna-XM_014649074.2; organism=Vigna radiata; type=mRNA; length=5796bp; location=Sequence derived from: chr06:35503276..35509071+ (Vigna radiataback to top Coding sequence (CDS) from alignment at chr06:35503276..35509071+ >rna-XM_014649074.2_VrVC1973A-SNU_v1 ID=rna-XM_014649074.2_VrVC1973A-SNU_v1; Name=rna-XM_014649074.2; organism=Vigna radiata; type=CDS; length=1254bp; location=Sequence derived from: chr06:35503276..35509071+ (Vigna radiataback to top |