rna-XM_014651110.2
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_014651110.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q93WI9|HD3A_ORYSJ (Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica OX=39947 GN=HD3A PE=1 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 2.173e-98 Identity = 131/174 (75.29%), Postives = 151/174 (86.78%), Query Frame = 0 Query: 3 GGSRDPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176 G RDPLVVGRV+GDVLD F S ++V+Y ++ VSNGCE KPS V +QPR+ +GG+D+R FYTL+ VDPDAPSPSDPNLREYLHWLVTDIP TT SFG EV+ YESPRP MGIHR+VFVLF+QLGR+TVYAPGWRQNFNT++FAELYNLG PVAAVYFN QRE+GSGGRR+Y Sbjct: 5 GRDRDPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGCELKPSMVTHQPRVEVGGNDMRTFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLVFVLFQQLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGRRVY 178
BLAST of rna-XM_014651110.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q8VWH2|RFT1_ORYSJ (Protein RICE FLOWERING LOCUS T 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RFT1 PE=1 SV=1) HSP 1 Score: 277.33 bits (708), Expect = 1.839e-95 Identity = 129/173 (74.57%), Postives = 146/173 (84.39%), Query Frame = 0 Query: 4 GSRDPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176 G DPLVVGR++GDVLDPF + VSY R VSNGCE KPS V QPR+ +GG+D+R FYTL+ VDPDAPSPS+PNLREYLHWLVTDIP TTG +FG EV+ YESPRP MGIHR+VFVLF+QLGR+TVYAPGWRQNF+TR FAELYNLG PVA VYFN QRE+GSGGRR+Y Sbjct: 5 GRDDPLVVGRIVGDVLDPFVRITNLSVSYGARIVSNGCELKPSMVTQQPRVVVGGNDMRTFYTLVMVDPDAPSPSNPNLREYLHWLVTDIPGTTGATFGQEVMCYESPRPTMGIHRLVFVLFQQLGRQTVYAPGWRQNFSTRNFAELYNLGSPVATVYFNCQREAGSGGRRVY 177
BLAST of rna-XM_014651110.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SXZ2|FT_ARATH (Protein FLOWERING LOCUS T OS=Arabidopsis thaliana OX=3702 GN=FT PE=1 SV=2) HSP 1 Score: 276.944 bits (707), Expect = 2.436e-95 Identity = 125/170 (73.53%), Postives = 150/170 (88.24%), Query Frame = 0 Query: 6 RDPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRL 175 RDPL+V RV+GDVLDPF SI ++V+Y R+V+NG + +PS V N+PR+ IGG+DLRNFYTL+ VDPD PSPS+P+LREYLHWLVTDIPATTG +FG+E+V YE+P P GIHR+VF+LFRQLGR+TVYAPGWRQNFNTREFAE+YNLGLPVAAV++N QRESG GGRRL Sbjct: 6 RDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFYTLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILFRQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGRRL 175
BLAST of rna-XM_014651110.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9S7R5|TSF_ARATH (Protein TWIN SISTER of FT OS=Arabidopsis thaliana OX=3702 GN=TSF PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 3.160e-91 Identity = 125/174 (71.84%), Postives = 145/174 (83.33%), Query Frame = 0 Query: 1 MPGGSRDPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRR 174 M RDPLVVG V+GDVLDPF + ++V+Y +R+V+NG + +PS V N+P + IGGDD RNFYTL+ VDPD PSPS+P+ REYLHWLVTDIPATTG +FG+EVV YESPRP GIHRIV VLFRQLGR+TVYAPGWRQ FNTREFAE+YNLGLPVAA YFN QRE+G GGRR Sbjct: 1 MSLSRRDPLVVGSVVGDVLDPFTRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFYTLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLFRQLGRQTVYAPGWRQQFNTREFAEIYNLGLPVAASYFNCQRENGCGGRR 174
BLAST of rna-XM_014651110.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FIT4|BFT_ARATH (Protein BROTHER of FT and TFL 1 OS=Arabidopsis thaliana OX=3702 GN=BFT PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 1.001e-66 Identity = 101/172 (58.72%), Postives = 127/172 (73.84%), Query Frame = 0 Query: 7 DPLVVGRVIGDVLDPFESSIPMRVSYN-NRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVY-APGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176 +PL+VGRVIGDVL+ F S+ MRV++N N VSNG E PS + ++PR+ IGG DLR+F+TLI +DPDAPSPS+P +REYLHW+VTDIP TT SFG E+V YE+P+P+ GIHR VF LF+Q GR+ V AP R+ FNT F+ + L PVAAVYFN QRE+ R Y Sbjct: 6 EPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQDLRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRYVFALFKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAPRRRPSY 177
BLAST of rna-XM_014651110.2 vs. UniProtKB/Swiss-Prot
Match: sp|P93003|TFL1_ARATH (Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana OX=3702 GN=TFL1 PE=1 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 3.034e-65 Identity = 98/169 (57.99%), Postives = 126/169 (74.56%), Query Frame = 0 Query: 7 DPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVY--APGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGR 173 +PL++GRV+GDVLD F + M VSYN + VSNG E PS V ++PR+ I G DLR+F+TL+ +DPD P PSDP L+E+LHW+VT+IP TT +FG EVV+YE PRP +GIHR VFVLFRQ R ++ P R +FNTR+FA Y+LGLPVAAV+FN QRE+ + R Sbjct: 10 EPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFFTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFRQKQRRVIFPNIPS-RDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177
BLAST of rna-XM_014651110.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9XH43|CET2_TOBAC (CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.486e-64 Identity = 99/169 (58.58%), Postives = 125/169 (73.96%), Query Frame = 0 Query: 7 DPLVVGRVIGDVLDPFESSIPMRVSYNN-RDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVY-APGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGR 173 DPLV+GRVIG+V+D F S+ M V+YN+ + V NG E PS V ++PR+ + G DLR+F+T+I +DPD P PSDP LRE+LHW+VTDIP TT SFG E+V YE PRP +GIHR VF+LF+Q R+TV AP R FNTR+FAE LG PVAAV+FN QRE+ + R Sbjct: 7 DPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDLRSFFTMIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGKEIVGYEMPRPNIGIHRFVFLLFKQKKRQTVLTAPLSRDRFNTRKFAEENELGSPVAAVFFNCQRETAARRR 175
BLAST of rna-XM_014651110.2 vs. UniProtKB/Swiss-Prot
Match: sp|O82088|SELFP_SOLLC (Protein SELF-PRUNING OS=Solanum lycopersicum OX=4081 GN=SP PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 9.040e-63 Identity = 99/175 (56.57%), Postives = 126/175 (72.00%), Query Frame = 0 Query: 1 MPGGSRDPLVVGRVIGDVLDPFESSIPMRVSYNN-RDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETV-YAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGR 173 M +PLV+GRVIG+V+D F S+ M V YNN + V NG EF PS V ++PR+ + G DLR+F+TLI +DPD P PSDP LRE+LHW+VTDIP TT SFG EVV YE PRP +GIHR VF+LF+Q R+T+ AP R F++R+F+E LG PVAAV+FN QRE+ + R Sbjct: 1 MASKMCEPLVIGRVIGEVVDYFCPSVKMSVVYNNNKHVYNGHEFFPSSVTSKPRVEVHGGDLRSFFTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREVVGYEMPRPNIGIHRFVFLLFKQKKRQTISSAPVSRDQFSSRKFSEENELGSPVAAVFFNCQRETAARRR 175
BLAST of rna-XM_014651110.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9XH42|CET4_TOBAC (CEN-like protein 4 OS=Nicotiana tabacum OX=4097 GN=CET4 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 1.101e-62 Identity = 97/169 (57.40%), Postives = 124/169 (73.37%), Query Frame = 0 Query: 7 DPLVVGRVIGDVLDPFESSIPMRVSYNN-RDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVY-APGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGR 173 DPLV+GRVIG+V+D F S+ M V+YN+ + V NG E PS V ++PR+ + G DLR+F+TLI +DPD P PSDP LRE+LHW+VTDIP TT SFG E+V YE PRP +GIHR VF+LF+Q R+T+ AP R FNTR+F+E LG PVAA +FN QRE+ + R Sbjct: 7 DPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDLRSFFTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREIVGYEMPRPNIGIHRFVFLLFKQKKRQTLLSAPLSRDRFNTRKFSEENELGSPVAAAFFNCQRETAARRR 175
BLAST of rna-XM_014651110.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9XH44|CET1_TOBAC (CEN-like protein 1 OS=Nicotiana tabacum OX=4097 GN=CET1 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 1.233e-61 Identity = 91/168 (54.17%), Postives = 121/168 (72.02%), Query Frame = 0 Query: 7 DPLVVGRVIGDVLDPFESSIPMRVSYN-NRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGR 173 +PLVV RVIG+V+D F S+ + V YN ++ V NG E P+ + +PR+ IGG+D+R+ YTLI DPD P PSDP LRE+LHW+VTDIP +T SFG E+V+YESP+P++GIHR V +L++Q GR+TV R +FNTR + LG PVAAVYFN QRE+ + R Sbjct: 7 EPLVVARVIGEVVDSFNPSVKLNVIYNGSKQVFNGHELMPAVIAAKPRVEIGGEDMRSAYTLIMTDPDVPGPSDPYLREHLHWIVTDIPGSTDSSFGREIVSYESPKPVIGIHRYVLLLYKQSGRQTVKPAATRDHFNTRRYTAENGLGSPVAAVYFNAQRETAARRR 174
BLAST of rna-XM_014651110.2 vs. Araport11
Match: AT1G65480.2 (| PEBP (phosphatidylethanolamine-binding protein) family protein | Chr1:24331378-24333689 FORWARD LENGTH=219 | 201606) HSP 1 Score: 280.026 bits (715), Expect = 6.842e-97 Identity = 125/170 (73.53%), Postives = 150/170 (88.24%), Query Frame = 0 Query: 6 RDPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRL 175 RDPL+V RV+GDVLDPF SI ++V+Y R+V+NG + +PS V N+PR+ IGG+DLRNFYTL+ VDPD PSPS+P+LREYLHWLVTDIPATTG +FG+E+V YE+P P GIHR+VF+LFRQLGR+TVYAPGWRQNFNTREFAE+YNLGLPVAAV++N QRESG GGRRL Sbjct: 50 RDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFYTLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILFRQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGRRL 219
BLAST of rna-XM_014651110.2 vs. Araport11
Match: AT1G65480.1 (| PEBP (phosphatidylethanolamine-binding protein) family protein | Chr1:24331510-24333689 FORWARD LENGTH=175 | 201606) HSP 1 Score: 276.944 bits (707), Expect = 2.492e-96 Identity = 125/170 (73.53%), Postives = 150/170 (88.24%), Query Frame = 0 Query: 6 RDPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRL 175 RDPL+V RV+GDVLDPF SI ++V+Y R+V+NG + +PS V N+PR+ IGG+DLRNFYTL+ VDPD PSPS+P+LREYLHWLVTDIPATTG +FG+E+V YE+P P GIHR+VF+LFRQLGR+TVYAPGWRQNFNTREFAE+YNLGLPVAAV++N QRESG GGRRL Sbjct: 6 RDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFYTLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILFRQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGRRL 175
BLAST of rna-XM_014651110.2 vs. Araport11
Match: AT4G20370.1 (| PEBP (phosphatidylethanolamine-binding protein) family protein | Chr4:11001011-11002965 REVERSE LENGTH=175 | 201606) HSP 1 Score: 266.544 bits (680), Expect = 3.233e-92 Identity = 125/174 (71.84%), Postives = 145/174 (83.33%), Query Frame = 0 Query: 1 MPGGSRDPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRR 174 M RDPLVVG V+GDVLDPF + ++V+Y +R+V+NG + +PS V N+P + IGGDD RNFYTL+ VDPD PSPS+P+ REYLHWLVTDIPATTG +FG+EVV YESPRP GIHRIV VLFRQLGR+TVYAPGWRQ FNTREFAE+YNLGLPVAA YFN QRE+G GGRR Sbjct: 1 MSLSRRDPLVVGSVVGDVLDPFTRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFYTLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLFRQLGRQTVYAPGWRQQFNTREFAEIYNLGLPVAASYFNCQRENGCGGRR 174
BLAST of rna-XM_014651110.2 vs. Araport11
Match: AT5G62040.1 (| PEBP (phosphatidylethanolamine-binding protein) family protein | Chr5:24922810-24923709 FORWARD LENGTH=177 | 201606) HSP 1 Score: 204.527 bits (519), Expect = 1.024e-67 Identity = 101/172 (58.72%), Postives = 127/172 (73.84%), Query Frame = 0 Query: 7 DPLVVGRVIGDVLDPFESSIPMRVSYN-NRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVY-APGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176 +PL+VGRVIGDVL+ F S+ MRV++N N VSNG E PS + ++PR+ IGG DLR+F+TLI +DPDAPSPS+P +REYLHW+VTDIP TT SFG E+V YE+P+P+ GIHR VF LF+Q GR+ V AP R+ FNT F+ + L PVAAVYFN QRE+ R Y Sbjct: 6 EPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQDLRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRYVFALFKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAPRRRPSY 177
BLAST of rna-XM_014651110.2 vs. Araport11
Match: AT5G03840.1 (| PEBP (phosphatidylethanolamine-binding protein) family protein | Chr5:1024760-1025796 REVERSE LENGTH=177 | 201606) HSP 1 Score: 200.675 bits (509), Expect = 3.104e-66 Identity = 98/169 (57.99%), Postives = 126/169 (74.56%), Query Frame = 0 Query: 7 DPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVY--APGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGR 173 +PL++GRV+GDVLD F + M VSYN + VSNG E PS V ++PR+ I G DLR+F+TL+ +DPD P PSDP L+E+LHW+VT+IP TT +FG EVV+YE PRP +GIHR VFVLFRQ R ++ P R +FNTR+FA Y+LGLPVAAV+FN QRE+ + R Sbjct: 10 EPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFFTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFRQKQRRVIFPNIPS-RDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177
BLAST of rna-XM_014651110.2 vs. Araport11
Match: AT2G27550.1 (| centroradiali | Chr2:11773417-11774509 FORWARD LENGTH=175 | 201606) HSP 1 Score: 190.66 bits (483), Expect = 2.510e-62 Identity = 94/171 (54.97%), Postives = 124/171 (72.51%), Query Frame = 0 Query: 5 SRDPLVVGRVIGDVLDPFESSIPMRVSYN-NRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYA-PGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGR 173 S DPL+VGRVIGDV+D ++ M V+YN ++ V NG E PS V +P++ + G D+R+F+TL+ DPD P PSDP LRE+LHW+VTDIP TT SFG E++ YE PRP +GIHR V++LF+Q R +V + P +R FNTREFA +LGLPVAAV+FN QRE+ + R Sbjct: 5 SSDPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHRFVYLLFKQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRETAARRR 175
BLAST of rna-XM_014651110.2 vs. Araport11
Match: AT1G18100.1 (| PEBP (phosphatidylethanolamine-binding protein) family protein | Chr1:6228049-6230110 REVERSE LENGTH=173 | 201606) HSP 1 Score: 175.637 bits (444), Expect = 2.118e-56 Identity = 91/173 (52.60%), Postives = 112/173 (64.74%), Query Frame = 0 Query: 3 GGSRDPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRE--TVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGR 173 S DPLVVGRVIGDVLD F + M V + + ++NGCE KPS N P++ I G YTL+ DPDAPSPS+PN+RE++HW+V DIP T PS G E++ Y PRP +GIHR + VLFRQ V P R NF+TR FA ++LGLPVA VYFN Q+E S R Sbjct: 2 AASVDPLVVGRVIGDVLDMFIPTANMSVYFGPKHITNGCEIKPSTAVNPPKVNISGHS-DELYTLVMTDPDAPSPSEPNMREWVHWIVVDIPGGTNPSRGKEILPYMEPRPPVGIHRYILVLFRQNSPVGLMVQQPPSRANFSTRMFAGHFDLGLPVATVYFNAQKEPASRRR 173
BLAST of rna-XM_014651110.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UKN7|A0A1S3UKN7_VIGRR (protein HEADING DATE 3A-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106766377 PE=3 SV=1) HSP 1 Score: 361.303 bits (926), Expect = 4.275e-126 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0 Query: 1 MPGGSRDPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176 MPGGSRDPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY Sbjct: 1 MPGGSRDPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176
BLAST of rna-XM_014651110.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3T9T8|A0A0S3T9T8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.11G108800 PE=3 SV=1) HSP 1 Score: 353.984 bits (907), Expect = 3.102e-123 Identity = 170/176 (96.59%), Postives = 174/176 (98.86%), Query Frame = 0 Query: 1 MPGGSRDPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176 MPGGSRDPLVVGRVIGDVLDPF+ SIPMRVSYNN+DV+NGCEFKPS VFNQPRIT+GGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY Sbjct: 2 MPGGSRDPLVVGRVIGDVLDPFQCSIPMRVSYNNKDVTNGCEFKPSQVFNQPRITVGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY 177
BLAST of rna-XM_014651110.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9VM32|A0A0L9VM32_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g191500 PE=3 SV=1) HSP 1 Score: 353.984 bits (907), Expect = 3.341e-123 Identity = 170/176 (96.59%), Postives = 174/176 (98.86%), Query Frame = 0 Query: 1 MPGGSRDPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176 MPGGSRDPLVVGRVIGDVLDPF+ SIPMRVSYNN+DV+NGCEFKPS VFNQPRIT+GGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY Sbjct: 1 MPGGSRDPLVVGRVIGDVLDPFQCSIPMRVSYNNKDVTNGCEFKPSQVFNQPRITVGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176
BLAST of rna-XM_014651110.2 vs. UniProtKB/TrEMBL
Match: tr|A0A219MKT7|A0A219MKT7_SOYBN (Flowering locus T 2c OS=Glycine max OX=3847 GN=FT2c PE=3 SV=1) HSP 1 Score: 349.747 bits (896), Expect = 1.647e-121 Identity = 170/176 (96.59%), Postives = 171/176 (97.16%), Query Frame = 0 Query: 1 MPGGSRDPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176 MP GSRDPLVVGRVIGDVLDPFE SIPMRVSYNNRDVSNGCEFKPS V NQPRI IGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHR+VFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY Sbjct: 1 MPSGSRDPLVVGRVIGDVLDPFECSIPMRVSYNNRDVSNGCEFKPSQVVNQPRINIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRLVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176
BLAST of rna-XM_014651110.2 vs. UniProtKB/TrEMBL
Match: tr|A0A219MKV7|A0A219MKV7_GLYSO (Flowering locus T 2c OS=Glycine soja OX=3848 GN=FT2c PE=3 SV=1) HSP 1 Score: 349.747 bits (896), Expect = 1.647e-121 Identity = 170/176 (96.59%), Postives = 171/176 (97.16%), Query Frame = 0 Query: 1 MPGGSRDPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176 MP GSRDPLVVGRVIGDVLDPFE SIPMRVSYNNRDVSNGCEFKPS V NQPRI IGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHR+VFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY Sbjct: 1 MPSGSRDPLVVGRVIGDVLDPFECSIPMRVSYNNRDVSNGCEFKPSQVVNQPRINIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRLVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176
BLAST of rna-XM_014651110.2 vs. UniProtKB/TrEMBL
Match: tr|V7C330|V7C330_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G074700g PE=3 SV=1) HSP 1 Score: 345.51 bits (885), Expect = 5.506e-120 Identity = 167/176 (94.89%), Postives = 171/176 (97.16%), Query Frame = 0 Query: 1 MPGGSRDPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176 M GGSRDPLVVGRVIGDVL+PFE SIPMRV+Y+NRDVSNGCEFKPS V NQPRI IGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNT+EFAELYNLGLPVAAVYFNIQRESGSGGRRLY Sbjct: 1 MAGGSRDPLVVGRVIGDVLEPFECSIPMRVTYSNRDVSNGCEFKPSQVVNQPRINIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTKEFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176
BLAST of rna-XM_014651110.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371FAN5|A0A371FAN5_MUCPR (Protein HEADING DATE 3A (Fragment) OS=Mucuna pruriens OX=157652 GN=HD3A PE=3 SV=1) HSP 1 Score: 347.051 bits (889), Expect = 1.891e-119 Identity = 165/175 (94.29%), Postives = 169/175 (96.57%), Query Frame = 0 Query: 1 MPGGSRDPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRL 175 MPGGSRDPLVVG VIGDVLDPFE SIPMRV+YNNRDVSNGCEFKPS V NQPRI IGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYE+PRPMMGIHR+VFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGR + Sbjct: 42 MPGGSRDPLVVGGVIGDVLDPFECSIPMRVTYNNRDVSNGCEFKPSQVVNQPRIVIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYENPRPMMGIHRMVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRSI 216
BLAST of rna-XM_014651110.2 vs. UniProtKB/TrEMBL
Match: tr|E3NYP3|E3NYP3_SOYBN (FT-like protein OS=Glycine max OX=3847 GN=FTL3 PE=2 SV=1) HSP 1 Score: 342.043 bits (876), Expect = 1.581e-118 Identity = 165/176 (93.75%), Postives = 169/176 (96.02%), Query Frame = 0 Query: 1 MPGGSRDPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176 MP GSRDPLVVG VIGDVLDPFE SIPMRV+YNNRDVSNGCEFKPS V NQPR+ IGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTG SFGHEVVTYESPRPMMGIHR+VFVLFRQLGRETVYAPGWRQNFNT+EFAELYNLGLPVAAVYFNIQRESGSGGRRLY Sbjct: 1 MPSGSRDPLVVGGVIGDVLDPFEYSIPMRVTYNNRDVSNGCEFKPSQVVNQPRVNIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGASFGHEVVTYESPRPMMGIHRLVFVLFRQLGRETVYAPGWRQNFNTKEFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176
BLAST of rna-XM_014651110.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2PVQ3|A0A0B2PVQ3_GLYSO (Protein HEADING DATE 3A OS=Glycine soja OX=3848 GN=D0Y65_043771 PE=3 SV=1) HSP 1 Score: 342.043 bits (876), Expect = 1.581e-118 Identity = 165/176 (93.75%), Postives = 169/176 (96.02%), Query Frame = 0 Query: 1 MPGGSRDPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176 MP GSRDPLVVG VIGDVLDPFE SIPMRV+YNNRDVSNGCEFKPS V NQPR+ IGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTG SFGHEVVTYESPRPMMGIHR+VFVLFRQLGRETVYAPGWRQNFNT+EFAELYNLGLPVAAVYFNIQRESGSGGRRLY Sbjct: 1 MPSGSRDPLVVGGVIGDVLDPFEYSIPMRVTYNNRDVSNGCEFKPSQVVNQPRVNIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGASFGHEVVTYESPRPMMGIHRLVFVLFRQLGRETVYAPGWRQNFNTKEFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176
BLAST of rna-XM_014651110.2 vs. UniProtKB/TrEMBL
Match: tr|A0A151QZ44|A0A151QZ44_CAJCA (Protein FLOWERING LOCUS T OS=Cajanus cajan OX=3821 GN=KK1_043407 PE=3 SV=1) HSP 1 Score: 337.806 bits (865), Expect = 6.108e-117 Identity = 163/176 (92.61%), Postives = 168/176 (95.45%), Query Frame = 0 Query: 1 MPGGSRDPLVVGRVIGDVLDPFESSIPMRVSYNNRDVSNGCEFKPSHVFNQPRITIGGDDLRNFYTLIAVDPDAPSPSDPNLREYLHWLVTDIPATTGPSFGHEVVTYESPRPMMGIHRIVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176 MPGGSRDPLVV RVIGDVLDPFE SIPMRV+Y N+DVSNGCEFKPS V NQPRI IGGDDLRNFYTLIAVDPDAPSPSDP LREYLHWLVTDIPATTGPSFGHEVVTYESPRP MGIHR+VFVLFR+LGRETVYAPGWRQNFNT+EFAELYNLGLPVAAVYFNIQRESGSGGRRLY Sbjct: 1 MPGGSRDPLVVARVIGDVLDPFECSIPMRVTYGNKDVSNGCEFKPSQVGNQPRINIGGDDLRNFYTLIAVDPDAPSPSDPYLREYLHWLVTDIPATTGPSFGHEVVTYESPRPTMGIHRVVFVLFRKLGRETVYAPGWRQNFNTKEFAELYNLGLPVAAVYFNIQRESGSGGRRLY 176 The following BLAST results are available for this feature:
BLAST of rna-XM_014651110.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot) Total hits: 10
BLAST of rna-XM_014651110.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11) Total hits: 7
BLAST of rna-XM_014651110.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_014651110.2_VrVC1973A-SNU_v1 ID=rna-XM_014651110.2_VrVC1973A-SNU_v1; Name=rna-XM_014651110.2; organism=Vigna radiata; type=mRNA; length=531bpback to top protein sequence of rna-XM_014651110.2_VrVC1973A-SNU_v1 >rna-XM_014651110.2_VrVC1973A-SNU_v1 ID=rna-XM_014651110.2_VrVC1973A-SNU_v1; Name=rna-XM_014651110.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=176bpback to top mRNA from alignment at chr01:17360268..17365256+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_014651110.2_VrVC1973A-SNU_v1 ID=rna-XM_014651110.2_VrVC1973A-SNU_v1; Name=rna-XM_014651110.2; organism=Vigna radiata; type=mRNA; length=4989bp; location=Sequence derived from: chr01:17360268..17365256+ (Vigna radiataback to top Coding sequence (CDS) from alignment at chr01:17360268..17365256+ >rna-XM_014651110.2_VrVC1973A-SNU_v1 ID=rna-XM_014651110.2_VrVC1973A-SNU_v1; Name=rna-XM_014651110.2; organism=Vigna radiata; type=CDS; length=531bp; location=Sequence derived from: chr01:17360268..17365256+ (Vigna radiataback to top |