rna-XM_014652688.2

Transcript Overview
Namerna-XM_014652688.2
Unique Namerna-XM_014652688.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length321
Productuncharacterized membrane protein YuiD-like, transcript variant X2
References
External references for this mRNA
DatabaseAccession
GeneID106767740
GenbankXM_014652688.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr07chromosomechr07:20114988..20117933 -Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL080Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0247Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0737Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivrvL562Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivrvL677Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL462Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL557Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvrvL0038Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0223Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0224Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL525Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvrvL817Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvrvL055Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvrvL237Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL679Pisum sativum Cameor genome v1aPisum sativum
tifvrvL299Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL691Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvrvL119Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvL310Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL705Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL717Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR664Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR693Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvuaR475Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR579Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvzwsR596Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR510Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR489Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvrvL439Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL530Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL240Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL436Cicer arietinum
carvrvL520Cicer arietinum
ccavrvL063Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL740Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL750Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR522Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR603Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR659Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR682Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR524Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR594Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL084Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL046Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL228Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL252Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR479Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106767740gene-LOC106767740_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014652688.2-5exon-XM_014652688.2-5_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014652688.2-4exon-XM_014652688.2-4_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014652688.2-3exon-XM_014652688.2-3_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014652688.2-2exon-XM_014652688.2-2_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014652688.2-1exon-XM_014652688.2-1_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014508174.1cds-XP_014508174.1_VrVC1973A-SNU_v1_4Vigna radiataCDS
cds-XP_014508174.1cds-XP_014508174.1_VrVC1973A-SNU_v1_3Vigna radiataCDS
cds-XP_014508174.1cds-XP_014508174.1_VrVC1973A-SNU_v1_2Vigna radiataCDS
cds-XP_014508174.1cds-XP_014508174.1_VrVC1973A-SNU_v1Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014652688.2_VrVC1973A-SNU_v1rna-XM_014652688.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014652688.2_VrVC1973A-SNU_v1rna-XM_014652688.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
[Close]
BLAST of rna-XM_014652688.2 vs. UniProtKB/Swiss-Prot
Match: sp|O32107|YUID_BACSU (Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) OX=224308 GN=yuiD PE=4 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.350e-18
Identity = 46/104 (44.23%), Postives = 64/104 (61.54%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVY----------ELPAEHPLAERRPLHELLGHTPPQVIVGGILGLL 94
            MPSSHSA VTAL++ + L+ G +  LFA+S +FA   M+DATGVR  AG QA V+N++V           + P      +++ L ELLGH P +V  GG+ G+L
Sbjct:   45 MPSSHSAAVTALSTGVALEHGLDSSLFAVSAIFAVITMFDATGVRRHAGEQATVINKLVIDFNRFVNEAKDFPKAAEKEKQKKLKELLGHQPIEVFFGGLTGIL 148
[Close]
BLAST of rna-XM_014652688.2 vs. Araport11
Match: AT1G24350.1 (| Acid phosphatase/vanadium-dependent haloperoxidase-related protein | Chr1:8639098-8640313 REVERSE LENGTH=168 | 201606)

HSP 1 Score: 158.688 bits (400), Expect = 5.335e-51
Identity = 80/97 (82.47%), Postives = 84/97 (86.60%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAV 97
            MPSSHSATVTALA AIGLQEGF G  FAI+ + AS VMYDATGVRL AGRQAEVLNQIVYELPAEHPLAE RPL ELLGHTPPQV+ GG+LG  TAV
Sbjct:   61 MPSSHSATVTALAVAIGLQEGFGGSHFAIALILASVVMYDATGVRLHAGRQAEVLNQIVYELPAEHPLAESRPLRELLGHTPPQVVAGGMLGSATAV 157
[Close]
BLAST of rna-XM_014652688.2 vs. Araport11
Match: AT1G67600.1 (| Acid phosphatase/vanadium-dependent haloperoxidase-related protein | Chr1:25336701-25337455 REVERSE LENGTH=163 | 201606)

HSP 1 Score: 157.918 bits (398), Expect = 1.016e-50
Identity = 79/97 (81.44%), Postives = 84/97 (86.60%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAV 97
            MPSSHSATVTALA A+GLQEGF G  FAI+ V  + VMYDATGVRL AGRQAEVLNQIVYELPAEHPLAE RPL ELLGHTPPQVI GG+LG+ TAV
Sbjct:   57 MPSSHSATVTALALAVGLQEGFGGSHFAIALVLTTIVMYDATGVRLHAGRQAEVLNQIVYELPAEHPLAETRPLRELLGHTPPQVIAGGMLGISTAV 153
[Close]
BLAST of rna-XM_014652688.2 vs. Araport11
Match: AT1G24350.3 (| Acid phosphatase/vanadium-dependent haloperoxidase-related protein | Chr1:8639098-8640313 REVERSE LENGTH=186 | 201606)

HSP 1 Score: 148.288 bits (373), Expect = 1.411e-46
Identity = 80/115 (69.57%), Postives = 84/115 (73.04%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQ------------------VIVGGILGLLTAV 97
            MPSSHSATVTALA AIGLQEGF G  FAI+ + AS VMYDATGVRL AGRQAEVLNQIVYELPAEHPLAE RPL ELLGHTPPQ                  V+ GG+LG  TAV
Sbjct:   61 MPSSHSATVTALAVAIGLQEGFGGSHFAIALILASVVMYDATGVRLHAGRQAEVLNQIVYELPAEHPLAESRPLRELLGHTPPQIVTELGEIMSTNRVLKESVVAGGMLGSATAV 175
[Close]
BLAST of rna-XM_014652688.2 vs. Araport11
Match: AT1G24350.5 (| Acid phosphatase/vanadium-dependent haloperoxidase-related protein | Chr1:8639485-8640313 REVERSE LENGTH=150 | 201606)

HSP 1 Score: 145.976 bits (367), Expect = 3.304e-46
Identity = 73/86 (84.88%), Postives = 75/86 (87.21%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVI 86
            MPSSHSATVTALA AIGLQEGF G  FAI+ + AS VMYDATGVRL AGRQAEVLNQIVYELPAEHPLAE RPL ELLGHTPPQV 
Sbjct:   61 MPSSHSATVTALAVAIGLQEGFGGSHFAIALILASVVMYDATGVRLHAGRQAEVLNQIVYELPAEHPLAESRPLRELLGHTPPQVC 146
[Close]
BLAST of rna-XM_014652688.2 vs. Araport11
Match: AT1G24350.2 (| Acid phosphatase/vanadium-dependent haloperoxidase-related protein | Chr1:8639407-8640313 REVERSE LENGTH=147 | 201606)

HSP 1 Score: 144.821 bits (364), Expect = 1.084e-45
Identity = 72/85 (84.71%), Postives = 75/85 (88.24%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQV 85
            MPSSHSATVTALA AIGLQEGF G  FAI+ + AS VMYDATGVRL AGRQAEVLNQIVYELPAEHPLAE RPL ELLGHTPPQ+
Sbjct:   61 MPSSHSATVTALAVAIGLQEGFGGSHFAIALILASVVMYDATGVRLHAGRQAEVLNQIVYELPAEHPLAESRPLRELLGHTPPQL 145
[Close]
BLAST of rna-XM_014652688.2 vs. Araport11
Match: AT1G24350.4 (| Acid phosphatase/vanadium-dependent haloperoxidase-related protein | Chr1:8639407-8640313 REVERSE LENGTH=145 | 201606)

HSP 1 Score: 144.436 bits (363), Expect = 1.242e-45
Identity = 72/84 (85.71%), Postives = 74/84 (88.10%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQ 84
            MPSSHSATVTALA AIGLQEGF G  FAI+ + AS VMYDATGVRL AGRQAEVLNQIVYELPAEHPLAE RPL ELLGHTPPQ
Sbjct:   61 MPSSHSATVTALAVAIGLQEGFGGSHFAIALILASVVMYDATGVRLHAGRQAEVLNQIVYELPAEHPLAESRPLRELLGHTPPQ 144
[Close]
BLAST of rna-XM_014652688.2 vs. Araport11
Match: AT3G21610.2 (| Acid phosphatase/vanadium-dependent haloperoxidase-related protein | Chr3:7609377-7610205 REVERSE LENGTH=122 | 201606)

HSP 1 Score: 134.035 bits (336), Expect = 7.734e-42
Identity = 68/96 (70.83%), Postives = 74/96 (77.08%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTA 96
            MPSSHSATVTALA AIG +EG   P FAI+ V A  VMYDA+GVRL AGRQAE+LNQIV E P EHPL+  RPL ELLGHTP QV  GGILG + A
Sbjct:   20 MPSSHSATVTALAVAIGFEEGAGAPAFAIAVVLACVVMYDASGVRLHAGRQAELLNQIVCEFPPEHPLSTVRPLRELLGHTPIQVAAGGILGCVVA 115
[Close]
BLAST of rna-XM_014652688.2 vs. Araport11
Match: AT3G21610.1 (| Acid phosphatase/vanadium-dependent haloperoxidase-related protein | Chr3:7609377-7610601 REVERSE LENGTH=174 | 201606)

HSP 1 Score: 133.65 bits (335), Expect = 5.450e-41
Identity = 70/102 (68.63%), Postives = 78/102 (76.47%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLLRA 102
            MPSSHSATVTALA AIG +EG   P FAI+ V A  VMYDA+GVRL AGRQAE+LNQIV E P EHPL+  RPL ELLGHTP QV  GGILG + A  L+R+
Sbjct:   72 MPSSHSATVTALAVAIGFEEGAGAPAFAIAVVLACVVMYDASGVRLHAGRQAELLNQIVCEFPPEHPLSTVRPLRELLGHTPIQVAAGGILGCVVAY-LMRS 172
[Close]
BLAST of rna-XM_014652688.2 vs. Araport11
Match: AT3G61770.1 (| Acid phosphatase/vanadium-dependent haloperoxidase-related protein | Chr3:22864635-22866248 FORWARD LENGTH=284 | 201606)

HSP 1 Score: 96.2857 bits (238), Expect = 2.880e-25
Identity = 48/103 (46.60%), Postives = 66/103 (64.08%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLLRAF 103
            MPSSHSA   AL +++ L  G    LF +   F+  VMYDA GVR  AG QAEVLN I+ +L   HP+++R+ L ELLGHTP QV+ G ++G++ A    + +
Sbjct:  179 MPSSHSALCMALTTSVALCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEVLNLIIRDLFEGHPISQRK-LKELLGHTPSQVLAGALVGIVIACFCCQGY 280
[Close]
BLAST of rna-XM_014652688.2 vs. Araport11
Match: AT3G12685.1 (| Acid phosphatase/vanadium-dependent haloperoxidase-related protein | Chr3:4029245-4030261 REVERSE LENGTH=213 | 201606)

HSP 1 Score: 71.2478 bits (173), Expect = 2.827e-16
Identity = 40/117 (34.19%), Postives = 61/117 (52.14%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYE-----------------LPAEHPLAERR-PLHELLGHTPPQVIVGGILGLLTAVGL 99
             PS+HS++V A A+AI  + GF   +F ++ V+A  +MYDA GVR + G+ A+VLN++                    L +E    E   PL E +GHT  +VI G + G L  + +
Sbjct:   93 FPSTHSSSVVAAATAIAFERGFADSIFGLTVVYAGLIMYDAQGVRREVGKHAKVLNKLTANARRSEVMSLKGNESNKALTSEEISEEIAPPLKESIGHTEVEVIAGALFGFLVTLSV 209
[Close]
BLAST of rna-XM_014652688.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UQ19|A0A1S3UQ19_VIGRR (uncharacterized protein LOC106767740 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106767740 PE=4 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 5.337e-69
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLLRAFPTN 106
            MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLLRAFPTN
Sbjct:   50 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLLRAFPTN 155
[Close]
BLAST of rna-XM_014652688.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UQG4|A0A1S3UQG4_VIGRR (uncharacterized protein LOC106767740 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106767740 PE=4 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 8.293e-69
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLLRAFPTN 106
            MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLLRAFPTN
Sbjct:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLLRAFPTN 106
[Close]
BLAST of rna-XM_014652688.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3R185|A0A0S3R185_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G198100 PE=4 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 1.595e-64
Identity = 101/106 (95.28%), Postives = 101/106 (95.28%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLLRAFPTN 106
            MPSSHSATVTALASAIGLQEGFEG LFAISFVFA TVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLLR   TN
Sbjct:   59 MPSSHSATVTALASAIGLQEGFEGSLFAISFVFACTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLLRPLATN 164
[Close]
BLAST of rna-XM_014652688.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TLQ0|A0A0L9TLQ0_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g094200 PE=4 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 1.595e-64
Identity = 101/106 (95.28%), Postives = 101/106 (95.28%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLLRAFPTN 106
            MPSSHSATVTALASAIGLQEGFEG LFAISFVFA TVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLLR   TN
Sbjct:   59 MPSSHSATVTALASAIGLQEGFEGSLFAISFVFACTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLLRPLATN 164
[Close]
BLAST of rna-XM_014652688.2 vs. UniProtKB/TrEMBL
Match: tr|C6TD69|C6TD69_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.460e-57
Identity = 92/106 (86.79%), Postives = 95/106 (89.62%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLLRAFPTN 106
            MPSSHSATVTALA+AIGLQEGF GPLFA + VFA  VMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAE RPL ELLGHTPPQVIVGGILGLLTA+GLLR    N
Sbjct:    1 MPSSHSATVTALAAAIGLQEGFGGPLFATALVFACIVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAESRPLRELLGHTPPQVIVGGILGLLTAIGLLRPVTKN 106
[Close]
BLAST of rna-XM_014652688.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445JCL1|A0A445JCL1_GLYSO (Putative membrane protein YuiD OS=Glycine soja OX=3848 GN=D0Y65_020142 PE=4 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.460e-57
Identity = 92/106 (86.79%), Postives = 95/106 (89.62%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLLRAFPTN 106
            MPSSHSATVTALA+AIGLQEGF GPLFA + VFA  VMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAE RPL ELLGHTPPQVIVGGILGLLTA+GLLR    N
Sbjct:    1 MPSSHSATVTALAAAIGLQEGFGGPLFATALVFACIVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAESRPLRELLGHTPPQVIVGGILGLLTAIGLLRPVTKN 106
[Close]
BLAST of rna-XM_014652688.2 vs. UniProtKB/TrEMBL
Match: tr|I1KRZ5|I1KRZ5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100812255 PE=4 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 2.211e-57
Identity = 92/106 (86.79%), Postives = 95/106 (89.62%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLLRAFPTN 106
            MPSSHSATVTALA+AIGLQEGF GPLFA + VFA  VMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAE RPL ELLGHTPPQVIVGGILGLLTA+GLLR    N
Sbjct:   50 MPSSHSATVTALAAAIGLQEGFGGPLFATALVFACIVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAESRPLRELLGHTPPQVIVGGILGLLTAIGLLRPVTKN 155
[Close]
BLAST of rna-XM_014652688.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0IJT8|A0A0R0IJT8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100812255 PE=4 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 2.252e-57
Identity = 92/106 (86.79%), Postives = 95/106 (89.62%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLLRAFPTN 106
            MPSSHSATVTALA+AIGLQEGF GPLFA + VFA  VMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAE RPL ELLGHTPPQVIVGGILGLLTA+GLLR    N
Sbjct:   54 MPSSHSATVTALAAAIGLQEGFGGPLFATALVFACIVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAESRPLRELLGHTPPQVIVGGILGLLTAIGLLRPVTKN 159
[Close]
BLAST of rna-XM_014652688.2 vs. UniProtKB/TrEMBL
Match: tr|A0A151SE12|A0A151SE12_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_025175 PE=4 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 7.115e-57
Identity = 91/106 (85.85%), Postives = 95/106 (89.62%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLLRAFPTN 106
            MPSSHSATVTALA AIGLQEGF GP+FAI+ VFA  VMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAE RPL ELLGHTPPQVIVGGILGLLTA+GL+R    N
Sbjct:   50 MPSSHSATVTALAGAIGLQEGFGGPIFAIALVFACIVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAESRPLRELLGHTPPQVIVGGILGLLTAIGLVRPLTKN 155
[Close]
BLAST of rna-XM_014652688.2 vs. UniProtKB/TrEMBL
Match: tr|V7CKR7|V7CKR7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G175900g PE=4 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 8.322e-55
Identity = 89/106 (83.96%), Postives = 92/106 (86.79%), Query Frame = 0 
Query:    1 MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLLRAFPTN 106
            MPSSHSATV+ALA+AIG QEG EGPLFA S VFA TVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAE  PL ELLGHTP QVIVGGILGL T+V LLR   TN
Sbjct:   47 MPSSHSATVSALAAAIGFQEGLEGPLFATSLVFACTVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAESIPLRELLGHTPSQVIVGGILGLFTSVSLLRPLTTN 152
The following BLAST results are available for this feature:
BLAST of rna-XM_014652688.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
sp|O32107|YUID_BACSU1.350e-1844.23Uncharacterized membrane protein YuiD OS=Bacillus ... [more]
back to top
BLAST of rna-XM_014652688.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
AT1G24350.15.335e-5182.47| Acid phosphatase/vanadium-dependent haloperoxida... [more]
AT1G67600.11.016e-5081.44| Acid phosphatase/vanadium-dependent haloperoxida... [more]
AT1G24350.31.411e-4669.57| Acid phosphatase/vanadium-dependent haloperoxida... [more]
AT1G24350.53.304e-4684.88| Acid phosphatase/vanadium-dependent haloperoxida... [more]
AT1G24350.21.084e-4584.71| Acid phosphatase/vanadium-dependent haloperoxida... [more]
AT1G24350.41.242e-4585.71| Acid phosphatase/vanadium-dependent haloperoxida... [more]
AT3G21610.27.734e-4270.83| Acid phosphatase/vanadium-dependent haloperoxida... [more]
AT3G21610.15.450e-4168.63| Acid phosphatase/vanadium-dependent haloperoxida... [more]
AT3G61770.12.880e-2546.60| Acid phosphatase/vanadium-dependent haloperoxida... [more]
AT3G12685.12.827e-1634.19| Acid phosphatase/vanadium-dependent haloperoxida... [more]
back to top
BLAST of rna-XM_014652688.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3UQ19|A0A1S3UQ19_VIGRR5.337e-69100.00uncharacterized protein LOC106767740 isoform X1 OS... [more]
tr|A0A1S3UQG4|A0A1S3UQG4_VIGRR8.293e-69100.00uncharacterized protein LOC106767740 isoform X2 OS... [more]
tr|A0A0S3R185|A0A0S3R185_PHAAN1.595e-6495.28Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9TLQ0|A0A0L9TLQ0_PHAAN1.595e-6495.28Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|C6TD69|C6TD69_SOYBN1.460e-5786.79Uncharacterized protein OS=Glycine max OX=3847 PE=... [more]
tr|A0A445JCL1|A0A445JCL1_GLYSO1.460e-5786.79Putative membrane protein YuiD OS=Glycine soja OX=... [more]
tr|I1KRZ5|I1KRZ5_SOYBN2.211e-5786.79Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A0R0IJT8|A0A0R0IJT8_SOYBN2.252e-5786.79Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A151SE12|A0A151SE12_CAJCA7.115e-5785.85Uncharacterized protein OS=Cajanus cajan OX=3821 G... [more]
tr|V7CKR7|V7CKR7_PHAVU8.322e-5583.96Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003832Protein of unknown function DUF212PFAMPF02681DUF212coord: 1..94
e-value: 5.3E-35
score: 120.3
IPR003832Protein of unknown function DUF212PANTHERPTHR31446ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEINcoord: 1..97

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014652688.2_VrVC1973A-SNU_v1 ID=rna-XM_014652688.2_VrVC1973A-SNU_v1; Name=rna-XM_014652688.2; organism=Vigna radiata; type=mRNA; length=321bp
ATGCCATCATCTCATTCAGCTACTGTTACTGCTCTTGCATCTGCCATTGG
GTTGCAAGAAGGCTTTGAAGGACCACTTTTTGCTATTTCCTTCGTTTTCG
CTTCTACTGTGATGTATGATGCTACTGGTGTAAGATTGCAAGCAGGACGC
CAAGCAGAGGTTTTAAACCAAATTGTGTATGAACTTCCTGCTGAGCATCC
TCTAGCTGAAAGAAGACCACTTCATGAACTTCTTGGCCACACACCCCCTC
AGGTAATTGTGGGTGGAATACTTGGACTCTTAACAGCAGTTGGCCTTCTA
AGAGCCTTCCCAACAAATTGA
back to top

protein sequence of rna-XM_014652688.2_VrVC1973A-SNU_v1

>rna-XM_014652688.2_VrVC1973A-SNU_v1 ID=rna-XM_014652688.2_VrVC1973A-SNU_v1; Name=rna-XM_014652688.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=106bp
MPSSHSATVTALASAIGLQEGFEGPLFAISFVFASTVMYDATGVRLQAGR
QAEVLNQIVYELPAEHPLAERRPLHELLGHTPPQVIVGGILGLLTAVGLL
RAFPTN
back to top

mRNA from alignment at chr07:20114988..20117933-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014652688.2_VrVC1973A-SNU_v1 ID=rna-XM_014652688.2_VrVC1973A-SNU_v1; Name=rna-XM_014652688.2; organism=Vigna radiata; type=mRNA; length=2946bp; location=Sequence derived from: chr07:20114988..20117933- (Vigna radiata
TGCATTCTTCAACCACATCAATCTCTTCCAATTACCCTCTAATTTCTGCT
TTCGTTGCTTTTGCCCTTGCCCAATCCATCAAGTTCTTCACCACCTGGTT
CGTATTCCCTTTTCTTTTCTTCCTTTTGTGTTTCCTTAACACGCAAATGC
AATTTGATCAGATGATCAGATGTTTTAAAAGTCTTAATGTTTCTTAGGTA
TGCAGGTTTAAAGAAAGAAGATGGGATCTTAATCAATTAGTTGGGTCTGG
TGGAATGCCATCATCTCATTCAGCTACTGTTACTGCTCTTGCATCTGCCA
TTGGGTTGCAAGAAGGCTTTGAAGGACCACTTTTTGCTATTTCCTTCGTT
TTCGCTTCTACTGTATGACTTCATTTAATATTTTGTTTAATATCTCTTTG
CTTAATATTTTGTTTACTAATTACTATGACCTGAGATTCTTGCTCCATAT
CTGCACCTGTCCCAAAAACAATTACGGAAGTTATACTGAAATAATTGTCG
TTTCTTCTTGAGATTGCATACAACCTCCTGCTTTTTAAACATTACAGCAT
CCTCCCATGTTGTACACATGATATAATGATTGGATGGCAGAGCCCTCAAG
CTTTAAGTTCAAAGTGATGATTTTCACTTCATCAACATTGATCTCGTGAT
GGTCTTTTTCTCTTTGATAACTTAACTTACCTATCTCTGTTTGATGTGCA
CCTTAATCCAATTTATGGACAGCCTTTTCTTTTGTCCAACTCTCAATAAA
GAAACTAATTACAAAAGAAGAGTCTAACTTAAAAGTCTAAGGGAGCCTCA
AGATTTATCAACTAGTTTACTTTACTCTGTAATGTTTCATACAATTAAGG
GTTTAATGCTATTTCTAAGAAGTGTTCGTATATATTTTTTAAATAACTAG
GGGATTAAAGTATGATATGAATAGACAAAAGAAAGACATGGGAAGAAATC
TGACCAAACATGTCAATATAATTTGCTTGAACAATTAAACATGCATCGGT
GTTAAACAATGGTTTTGTAAAATAAATTTCTGAAAAGAGAATGGTGGCAG
GTGATGTATGATGCTACTGGTGTAAGATTGCAAGCAGGACGCCAAGCAGA
GGTTTGATGCCTTTTGCACCTATGCCATTTTTTTCTGTTTGTTGTCTTTG
CTTGCTGTGCATAGAAGCTTTGCTCCTTTAGTTTAGTTGGTTTCAGTGAA
TTTTATTGAATTTGAATCAATGAATTTTCCCAGGTTTTAAACCAAATTGT
GTATGAACTTCCTGCTGAGCATCCTCTAGCTGAAAGAAGACCACTTCATG
AACTTCTTGGCCACACACCCCCTCAGGTTACCATTTTTCATTGCATTGTT
TCTATAGTTATAATTATTTGATGGACCTAAGCTCAACCAATGAAATTCAG
TGCACCATAAAAGGTCACTGCTTCAAGATTATTGTTTGAAAGTTTTTATT
GTGAATGACTGAGATATCTACAACTTTTGAGGTATTTATATGAACAATTC
ATTCCTCACATGTGTCTATCTCAGGAAAAAAATTTCAACAATCCTATCAT
TCTCGTATATATGTTCACTCTGAATTATAATTTCCTTCAGTTAATAACTA
GTTTGTGCAAAGTTATTTCTTTCTTTCTTTCCTTCCTCATTTTACTCAAT
TGGTCCATACTCTTTTAATCATTATAGAAATACCAGCTTTTCATTTAGTA
TTTATATTTAAAAATTATTATTTTTAGTCTTTACATTTCTTATTTTTATC
GTTTATGTGGATCTATCTTTTTATTGAATTTTAGCATTTTAATCAAGAAA
GGAAAAATGAAAAATGAAATTTTTTTTTTTTTTATAAAATTTATTTTATA
CAAAATTTTCAAAATTTGTTTTTAACCTTCGGATAAACTAACTATAGTTT
AAGGAAAATTCTAATTTCATTTTTTATATTTATTTTCTTTAAAAATTTCC
TGCTTGTCGCGCTATATGGTTTTTTTCTTTTAAAATTTGGATTAAGTGTA
TCTATATATGGTCATTTTAAATATAAAAATATTCTTTTTAATTTCTCTGA
GAAAGTAGTTTACTTAATTTCTCTGAGAAAGTAGTGTTTACATTGAAAGG
AAAACCATAATAGGTAGTCATGTAAACTACTAATAATAATAGTAATCAAA
TGACCAAAATCTAAAATGATATTTAACAGAGAGAGTAAATTAAACATTCT
TCAAATCATAAGCTTAAAAGTACTGATTTTAAGTTTCTTTCATACATACA
AGCTGCAAATGATACTTATTGAGAATGGTAAATTCTTTTATCATATTTTT
TTTAGTCAATTAAACTGAAACCTTTGTTATTGTTTCCTTCACTTTCACAA
TTATTAACTACACTTGCAAACTCATATGAAAAGCCTAAACTACCCTTTAC
TATTGCATAACACCATTCTTACCGTCACTCTCATTATTGTGATCACTATT
GCAGGAAAGTAAAAGCAAACATGTACTCTTTGAAATTTTAGAAAAAGAGA
GAATAAAAAAGTAATTTGAGATAAGATGAAGAAATGATTGTAAATTAGTG
TTTTGTTTTGTATGATGGCTGTGCAGGTAATTGTGGGTGGAATACTTGGA
CTCTTAACAGCAGTTGGCCTTCTAAGAGCCTTCCCAACAAATTGAGGCCT
TTCTTCACTTCACTTTCTGCTCTCAAATTCTTCTCTCAAAAATAACTTTG
CATTTCAACAACTTAACATTTTTCTGTTCTCATGATAAAAAGAATTGAAT
GCAATAGACTTCATGCGTTACAATCTACTAGTATTTGTGGGTGTTAGGTA
TCTAAAAGGAATAATCATGTATTTTATAGGAATTTAAGTGTAGGTTGAGT
TCATATTGAAACAAAAAAAAAGTTTAGTGGTACAGAAAGAAACTCATTCT
ACTAAAGTTTTAGTAATATAAAGGGCTGGTGTTAGGCTTTTTGCTT
back to top

Coding sequence (CDS) from alignment at chr07:20114988..20117933-

>rna-XM_014652688.2_VrVC1973A-SNU_v1 ID=rna-XM_014652688.2_VrVC1973A-SNU_v1; Name=rna-XM_014652688.2; organism=Vigna radiata; type=CDS; length=321bp; location=Sequence derived from: chr07:20114988..20117933- (Vigna radiata
ATGCCATCATCTCATTCAGCTACTGTTACTGCTCTTGCATCTGCCATTGG
GTTGCAAGAAGGCTTTGAAGGACCACTTTTTGCTATTTCCTTCGTTTTCG
CTTCTACTGTGATGTATGATGCTACTGGTGTAAGATTGCAAGCAGGACGC
CAAGCAGAGGTTTTAAACCAAATTGTGTATGAACTTCCTGCTGAGCATCC
TCTAGCTGAAAGAAGACCACTTCATGAACTTCTTGGCCACACACCCCCTC
AGGTAATTGTGGGTGGAATACTTGGACTCTTAACAGCAGTTGGCCTTCTA
AGAGCCTTCCCAACAAATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003832DUF212